+D GENES KO
#
KEGG Orthology (KO) - Stenotrophomonas maltophilia D457
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:smz00010]
D SMD_1956 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1728 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_3616 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1719 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMD_3490 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SMD_0017 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SMD_3400 alf1; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SMD_2983 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMD_3406 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMD_3403 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMD_1268 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMD_1655 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMD_3401 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMD_2613 pps; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SMD_0412 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_1685 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_3709 DLAT; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3577 adhC; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMD_0025 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SMD_3586 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SMD_4155 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SMD_2229 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SMD_1307 agp; Glucose-1-phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D SMD_3476 hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_4192 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
C 00020 Citrate cycle (TCA cycle) [PATH:smz00020]
D SMD_3438 gltA; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D SMD_2022 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SMD_2025 acnB; Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SMD_3868 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SMD_0856 Isocitrate dehydrogenase [NAD] K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D SMD_2774 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SMD_2775 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3354 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SMD_3355 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SMD_0398 CoA tranferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D SMD_1734 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SMD_1735 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SMD_1732 sdhC; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SMD_1733 sdhD; Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SMD_2800 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SMD_2769 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SMD_0819 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SMD_1155 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SMD_0412 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_1685 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_3709 DLAT; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:smz00030]
D SMD_1719 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMD_1729 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SMD_1727 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D SMD_3630 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SMD_3910 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SMD_3416 tktA; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SMD_0716 talB; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SMD_3469 rpiA; Ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SMD_0675 rbsK; Ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0755 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMD_1726 edd; Phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D SMD_0026 eda; 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SMD_1725 kgdA; 4-Hydroxy-2-oxoglutarate aldolase) / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SMD_2716 gcd; quinoprotein glucose dehydrogenase K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2]
D SMD_3004 Glyoxylate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SMD_3400 alf1; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SMD_0017 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SMD_3490 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:smz00040]
D SMD_2759 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SMD_1845 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMD_3910 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SMD_2240 Xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D SMD_2239 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:smz00051]
D SMD_1967 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SMD_0548 manA; Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_2548 3-oxoacyl-[acyl-carrier protein] reductase K21883 lra5; 2-dehydro-3-deoxy-L-rhamnonate dehydrogenase (NAD+) [EC:1.1.1.401]
D SMD_3490 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SMD_0017 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SMD_2226 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SMD_2239 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D SMD_1308 Alginate lyase precursor K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D SMD_3400 alf1; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SMD_2983 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMD_2227 fruA; PTS system, fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMD_1029 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:smz00052]
D SMD_2229 hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SMD_0533 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMD_3726 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMD_1845 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_1956 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1728 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_3616 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_3490 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SMD_4003 agaZ; Tagatose-6-phosphate kinase AgaZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D SMD_1097 aglA; Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SMD_1099 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SMD_4000 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SMD_4001 agaS; Predicted galactosamine-6-phosphate isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:smz00053]
D SMD_2759 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SMD_4144 Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:smz00500]
D SMD_1097 aglA; Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SMD_1099 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SMD_4000 Maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D SMD_1845 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMD_2232 Glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_0379 bglX; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2237 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2554 cgb; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2428 glgA; Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D SMD_2427 glgB; 1,4-alpha-glucan (glycogen) branching enzyme,GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SMD_2307 Trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D SMD_2425 malQ; 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SMD_2422 glgX; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D SMD_2424 Malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D SMD_2426 Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D SMD_3346 otsA; Alpha,alpha-trehalose-phosphate synthase [UDP-forming] K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D SMD_3344 otsB; Trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_1956 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1728 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_3616 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1719 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMD_1967 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:smz00520]
D SMD_0575 chiA; Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D SMD_2957 chiA2; Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D SMD_3119 nagZ; Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SMD_3618 nahB; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SMD_4002 ROK domain containing protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D SMD_3612 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SMD_4005 nagA2; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SMD_1967 scrK; Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SMD_3613 Glucosamine-6-phosphate deaminase [isomerizing],alternative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMD_3685 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMD_2988 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SMD_3694 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SMD_0334 Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D SMD_2885 Similar to phosphoglycolate phosphatase,clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D SMD_1054 Predicted phosphotransferase related to Ser/Thr protein kinases K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D SMD_1053 nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D SMD_1041 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMD_1914 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMD_0599 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SMD_1633 wbpO; Polysaccharide biosynthetic protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D SMD_2233 xynB; Beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D SMD_1956 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1728 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_3616 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_1845 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMD_2759 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SMD_0533 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMD_3726 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMD_4144 Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SMD_1029 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SMD_1719 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMD_0548 manA; Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:smz00620]
D SMD_4155 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SMD_0412 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_1685 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_3709 DLAT; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_0025 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SMD_3577 adhC; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMD_3586 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SMD_3401 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMD_1321 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMD_3834 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMD_3835 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMD_2989 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMD_0398 CoA tranferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D SMD_2544 lctD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D SMD_3340 poxB; Pyruvate oxidase [ubiquinone, cytochrome] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D SMD_1208 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SMD_2543 dld; D-Lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D SMD_3682 Lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SMD_0934 gloB; Hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SMD_1773 hchA; Chaperone protein hchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D SMD_3004 Glyoxylate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SMD_3541 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D SMD_0819 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SMD_1155 mqo; Malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SMD_2800 Fumarate hydratase class I, aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D SMD_2769 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SMD_0666 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMD_2613 pps; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SMD_0199 mls; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3520 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:smz00630]
D SMD_0200 aceA; Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D SMD_4155 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SMD_0199 mls; Malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D SMD_0819 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SMD_3438 gltA; Citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D SMD_2022 acn; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SMD_2025 acnB; Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3551 fabG3; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SMD_2896 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SMD_0296 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D SMD_1237 katA2; Catalase K03781 katE; catalase [EC:1.11.1.6]
D SMD_3157 katE; Catalase K03781 katE; catalase [EC:1.11.1.6]
D SMD_3004 Glyoxylate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SMD_0499 gph; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SMD_3402 gph2; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SMD_0103 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_1410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_0607 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMD_3153 gcvP; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SMD_3225 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3224 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SMD_1109 gip; Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D SMD_3186 D-glycerate 3-kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D SMD_0026 eda; 4-Hydroxy-2-oxoglutarate aldolase / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SMD_1725 kgdA; 4-Hydroxy-2-oxoglutarate aldolase) / 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D SMD_3446 fdnG; Formate dehydrogenase O alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SMD_3447 fdnH; Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SMD_3448 fdnI; Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D SMD_0222 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SMD_2692 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:smz00640]
D SMD_4155 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SMD_0821 prpE; Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D SMD_3930 pdhA; Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SMD_3931 pdhB; Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SMD_2785 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SMD_3933 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_2670 Alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SMD_3169 Alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_1321 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMD_3834 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMD_3835 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMD_2989 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMD_1253 dat; Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D SMD_1401 aptA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SMD_3355 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SMD_3354 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SMD_0229 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SMD_3181 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D SMD_3176 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D SMD_3180 acnA; 2-methylcitrate dehydratase FeS dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D SMD_3177 PrpF protein involved in 2-methylcitrate cycle K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D SMD_2025 acnB; Aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D SMD_3182 prpB; Methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D SMD_0061 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:smz00650]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_1847 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_1389 crt2; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D SMD_1813 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D SMD_2605 phbC; Polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D SMD_2606 PHA synthase subunit K22881 phaE; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaE
D SMD_1318 phaZ; poly(3-hydroxybutyrate) depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D SMD_3551 fabG3; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SMD_2896 phbB; Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D SMD_1734 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SMD_1735 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SMD_1732 sdhC; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SMD_1733 sdhD; Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SMD_1253 dat; Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D SMD_1415 Succinate-semialdehyde dehydrogenase [NAD] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMD_2011 Succinate-semialdehyde dehydrogenase [NAD] K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D SMD_0398 CoA tranferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D SMD_1988 hmgcL; Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SMD_0550 lpsI; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SMD_0551 lpsJ; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SMD_1873 D-beta-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D SMD_2012 ilvK; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3517 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3518 ilvN; Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:smz00660]
D SMD_2012 ilvK; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3517 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3518 ilvN; Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SMD_3355 sucC; Succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SMD_3354 sucD; Succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SMD_3522 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SMD_3523 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SMD_3524 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:smz00562]
D SMD_1690 plcC; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D SMD_2893 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SMD_1757 putative phytase precursor K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8]
D SMD_0229 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SMD_2983 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:smz00190]
D SMD_2980 nuoA; NADH ubiquinone oxidoreductase chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D SMD_2979 nuoB; NADH-ubiquinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D SMD_2978 nuoC; NADH-ubiquinone oxidoreductase chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D SMD_2977 nuoD; NADH-ubiquinone oxidoreductase chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D SMD_2976 nuoE; NADH-ubiquinone oxidoreductase chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D SMD_2975 nuoF; NADH-ubiquinone oxidoreductase chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D SMD_2974 nuoG; NADH-ubiquinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D SMD_2973 nuoH; NADH-ubiquinone oxidoreductase chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D SMD_2972 nuoI; NADH-ubiquinone oxidoreductase chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D SMD_2971 nuoJ; NADH-ubiquinone oxidoreductase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D SMD_2970 nuoK; NADH-ubiquinone oxidoreductase chain K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D SMD_2969 nuoL; NADH-ubiquinone oxidoreductase chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D SMD_2968 nuoM; NADH-ubiquinone oxidoreductase chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D SMD_2967 nuoN; NADH-ubiquinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D SMD_3796 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SMD_1734 sdhA; Succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SMD_1735 sdhB; Succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SMD_1732 sdhC; Succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SMD_1733 sdhD; Succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SMD_1430 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D SMD_1431 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SMD_1432 petC; ubiquinol cytochrome C oxidoreductase,cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D SMD_0367 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SMD_1216 cyoD; Cytochrome O ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D SMD_3976 cyoD2; Cytochrome O ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D SMD_0362 Cytochrome c oxidase polypeptide III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D SMD_0359 ctaD; Cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D SMD_0358 ctaC; Cytochrome c oxidase polypeptide II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D SMD_0361 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D SMD_0366 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SMD_1215 cyoC; Cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D SMD_3977 cyoC2; Cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D SMD_1214 cyoB; Cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D SMD_3978 cyoB2; Cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D SMD_1213 cyoA; Cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D SMD_3979 cyoA2; Cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D SMD_2855 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SMD_4109 cioA; putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SMD_2856 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SMD_4108 cioB; putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SMD_2857 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SMD_0168 Cytochrome c K08738 CYC; cytochrome c
D SMD_3700 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SMD_3698 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SMD_3699 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SMD_3701 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SMD_3697 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SMD_3704 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SMD_3702 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SMD_3703 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SMD_1759 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SMD_3505 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SMD_0850 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SMD_0747 Transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:smz00680]
D SMD_3577 adhC; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMD_3575 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D SMD_3446 fdnG; Formate dehydrogenase O alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SMD_3447 fdnH; Formate dehydrogenase O beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D SMD_3448 fdnI; Formate dehydrogenase O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D SMD_0607 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMD_1655 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMD_0666 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMD_0819 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SMD_3400 alf1; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SMD_0017 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SMD_3490 pfk; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SMD_4155 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SMD_2613 pps; Phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SMD_1268 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMD_1976 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMD_2682 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:smz00910]
D SMD_1224 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D SMD_2745 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D SMD_0103 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_1410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_0064 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMD_0063 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SMD_2735 Carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:smz00920]
D SMD_2251 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SMD_2249 ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SMD_2250 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SMD_1893 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SMD_2259 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SMD_3229 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SMD_2430 cysJ; Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SMD_1061 probable oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SMD_3819 Uncharacterized iron-regulated membrane protein Iron-uptake factor PiuB K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SMD_1392 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SMD_3397 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMD_3681 Cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMD_2851 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SMD_3203 met2; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SMD_3202 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SMD_2920 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:smz00061]
D SMD_1321 accA; Acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMD_3834 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMD_3835 accC; Biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMD_2989 accD; Acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMD_0980 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SMD_4104 acpP2; Acyl carrier protein (ACP2) K02078 acpP; acyl carrier protein
D SMD_4105 Acyl carrier protein (ACP1) K02078 acpP; acyl carrier protein
D SMD_0978 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMD_1147 Malonyl CoA acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMD_0976 fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase,KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SMD_0492 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SMD_4093 3-oxoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SMD_0981 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMD_4090 fabF2; 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMD_0979 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_2369 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_1997 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_3221 fabG2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4015 fabG4; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4091 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_0493 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SMD_1327 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMD_1813 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D SMD_2017 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:smz00071]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_1846 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_1847 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SMD_3216 fadE; Acyl-CoA dehydrogenase, short-chain specific K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D SMD_0170 GCDH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SMD_2017 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SMD_3577 adhC; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMD_0025 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:smz00561]
D SMD_3186 D-glycerate 3-kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D SMD_3586 Alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SMD_3713 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SMD_0057 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SMD_0687 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SMD_2456 dgk; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:smz00564]
D SMD_0126 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P) ] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SMD_3712 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SMD_0057 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D SMD_0687 dgkA; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SMD_2456 dgk; Diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SMD_1690 plcC; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D SMD_2796 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SMD_4234 glpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SMD_2539 cdh; CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D SMD_1332 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SMD_3841 cdsA2; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SMD_2607 pssA2; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SMD_0562 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SMD_3008 psd; Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SMD_1472 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SMD_3846 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SMD_3902 Phosphoserine phosphatase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D SMD_0012 cls; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SMD_4129 cls2; Cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SMD_3102 cardiolipin synthase K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:smz00565]
D SMD_2796 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SMD_1690 plcC; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:smz00600]
D SMD_3618 nahB; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism [PATH:smz00590]
D SMD_2796 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SMD_3650 Aminopeptidase N K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
C 00591 Linoleic acid metabolism
D SMD_2796 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:smz00592]
D SMD_2796 Phospholipase A1 precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D SMD_1846 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:smz01040]
D SMD_0038 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D SMD_2158 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D SMD_2477 Possible linoleoyl-CoA desaturase (delta(6)-desaturase) K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D SMD_2478 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D SMD_0683 tesA; Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SMD_1185 tesB; Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:smz00230]
D SMD_0728 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SMD_3230 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0755 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMD_0841 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SMD_3848 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SMD_1045 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SMD_1179 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D SMD_0576 purL; Phosphoribosylformylglycinamidine synthase,synthetase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SMD_1049 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SMD_1440 purK; Phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SMD_1439 purE; Phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SMD_3912 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SMD_2770 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SMD_3847 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMD_1822 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SMD_2743 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SMD_1870 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SMD_1661 surE; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SMD_3349 Uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SMD_3118 hpt; Hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SMD_1859 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SMD_1849 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SMD_3457 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP,XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SMD_2183 yagR; Periplasmic aromatic aldehyde oxidoreductase,molybdenum binding subunit YagR K11177 yagR; xanthine dehydrogenase YagR molybdenum-binding subunit [EC:1.17.1.4]
D SMD_2184 yagS; Periplasmic aromatic aldehyde oxidoreductase,FAD binding subunit YagS K11178 yagS; xanthine dehydrogenase YagS FAD-binding subunit [EC:1.17.1.4]
D SMD_2185 yagT; Periplasmic aromatic aldehyde oxidoreductase,iron-sulfur subunit YagT K13483 yagT; xanthine dehydrogenase YagT iron-sulfur-binding subunit
D SMD_2567 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMD_1861 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMD_4169 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMD_3445 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SMD_2487 nrdE; Ribonucleotide reductase of class Ia (aerobic),alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMD_0215 RRM1; Ribonucleotide reductase of class Ia (aerobic),alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMD_2486 nrdF; Ribonucleotide reductase of class Ia (aerobic),beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMD_0216 RRM2; Ribonucleotide reductase of class Ia (aerobic),beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMD_3443 spoT; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SMD_0849 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SMD_3251 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D SMD_3121 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D SMD_3164 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SMD_3647 Sugar kinase K00856 ADK; adenosine kinase [EC:2.7.1.20]
D SMD_3561 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D SMD_1446 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SMD_3489 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SMD_3228 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SMD_0697 apaH; Bis(5'-nucleosyl)-tetraphosphatase, symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
C 00240 Pyrimidine metabolism [PATH:smz00240]
D SMD_2000 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMD_1999 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMD_1023 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SMD_2882 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SMD_1915 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SMD_0330 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SMD_0054 pyrF; Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SMD_1335 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SMD_1849 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SMD_3228 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SMD_3055 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SMD_3100 Predicted metal-dependent hydrolase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D SMD_1651 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SMD_1838 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SMD_2743 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SMD_1870 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SMD_1661 surE; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SMD_1755 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SMD_1446 Decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D SMD_3652 codA; Cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SMD_3025 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SMD_2487 nrdE; Ribonucleotide reductase of class Ia (aerobic),alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMD_0215 RRM1; Ribonucleotide reductase of class Ia (aerobic),alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMD_2486 nrdF; Ribonucleotide reductase of class Ia (aerobic),beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMD_0216 RRM2; Ribonucleotide reductase of class Ia (aerobic),beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMD_0984 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SMD_0322 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SMD_0043 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SMD_0694 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SMD_0406 Nitroreductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:smz00250]
D SMD_0742 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SMD_0766 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SMD_0512 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SMD_1352 asnB; Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SMD_2784 asnB2; Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SMD_2840 Possible hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D SMD_3555 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMD_2873 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMD_2868 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMD_3164 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SMD_2770 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SMD_1023 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SMD_1253 dat; Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D SMD_1415 Succinate-semialdehyde dehydrogenase [NAD] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMD_2011 Succinate-semialdehyde dehydrogenase [NAD] K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D SMD_0064 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMD_0063 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SMD_2745 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D SMD_0356 putA; Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SMD_0103 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_1410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_2000 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMD_1999 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMD_3613 Glucosamine-6-phosphate deaminase [isomerizing],alternative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMD_3685 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMD_0841 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:smz00260]
D SMD_1939 thrA; Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SMD_1089 lysA; Aspartokinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SMD_3003 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMD_3201 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMD_1940 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SMD_1941 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SMD_0607 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMD_3004 Glyoxylate reductase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D SMD_1268 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMD_3186 D-glycerate 3-kinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D SMD_1976 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMD_2682 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMD_0833 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SMD_0835 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D SMD_3153 gcvP; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SMD_3225 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3224 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SMD_2607 pssA2; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SMD_0562 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SMD_2018 betA; Choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D SMD_2019 betB; Betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D SMD_0527 cbsB; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SMD_0528 metC; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SMD_3199 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SMD_3519 tdcB; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMD_4018 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMD_2938 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMD_2990 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SMD_2992 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:smz00270]
D SMD_3397 cysK; Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMD_3681 Cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMD_0528 metC; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SMD_0527 cbsB; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SMD_2753 metH2; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SMD_2754 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SMD_2261 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SMD_0668 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SMD_3899 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SMD_3952 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SMD_3349 Uncharacterized conserved protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SMD_2887 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D SMD_3117 mtaP; 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D SMD_2718 mtnA; Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D SMD_1972 mtnB; Methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D SMD_1254 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase related protein K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D SMD_1970 masA; 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D SMD_1971 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D SMD_0018 aspC; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SMD_0503 GAF domain-containing proteins K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SMD_1595 Site-specific DNA methylase-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMD_0664 sahH; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SMD_1939 thrA; Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SMD_1089 lysA; Aspartokinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SMD_3003 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMD_3201 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMD_2851 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SMD_3203 met2; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SMD_3202 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SMD_0740 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMD_3587 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SMD_3242 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SMD_1392 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SMD_2938 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMD_0819 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SMD_3199 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SMD_1976 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMD_2682 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:smz00280]
D SMD_0740 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMD_3104 vdh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D SMD_3930 pdhA; Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SMD_3931 pdhB; Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SMD_2785 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SMD_3933 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_0207 ivd; Isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_1846 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SMD_0233 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D SMD_0229 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D SMD_1401 aptA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SMD_1253 dat; Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D SMD_0205 Methylcrotonyl-CoA carboxylase biotin-containing subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D SMD_0206 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D SMD_1990 Methylglutaconyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D SMD_1988 hmgcL; Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SMD_0550 lpsI; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D SMD_0551 lpsJ; Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:smz00290]
D SMD_3519 tdcB; Threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMD_4018 Threonine dehydratase, catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMD_3522 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SMD_3523 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SMD_3524 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SMD_2012 ilvK; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3517 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3518 ilvN; Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SMD_3516 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SMD_4038 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMD_0740 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMD_3104 vdh; Leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D SMD_3555 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMD_3520 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:smz00300]
D SMD_3201 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMD_1939 thrA; Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SMD_1089 lysA; Aspartokinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SMD_3003 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMD_1709 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SMD_1998 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SMD_1347 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SMD_3477 astC; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SMD_1350 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SMD_3665 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SMD_0639 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SMD_0640 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:smz00310]
D SMD_1919 Aldehyde dehydrogenase B K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D SMD_2775 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_0170 GCDH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_2938 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMD_1253 dat; Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D SMD_1415 Succinate-semialdehyde dehydrogenase [NAD] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMD_0397 Putative cytoplasmic protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
C 00220 Arginine biosynthesis [PATH:smz00220]
D SMD_2874 N-acetylornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D SMD_2873 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMD_2868 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMD_0276 arcA; Arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D SMD_0103 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_1410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_2745 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D SMD_3555 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMD_2871 Acetylglutamate kinase K22478 K22478; bifunctional N-acetylglutamate synthase/kinase [EC:2.3.1.1 2.7.2.8]
D SMD_2869 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SMD_3477 astC; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SMD_2872 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:smz00330]
D SMD_3652 codA; Cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D SMD_2577 adi; Lysine decarboxylase 2, constitutive K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D SMD_3951 speA; Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D SMD_1834 N-carbamoylputrescine amidase (3.5.1.53) K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D SMD_3952 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D SMD_3899 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D SMD_1402 aldH; Aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-]
D SMD_0815 amidotransferase-related protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SMD_1408 Oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D SMD_0276 arcA; Arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D SMD_1011 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SMD_0356 putA; Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SMD_2866 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SMD_2865 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SMD_0722 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SMD_2324 pip2; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism [PATH:smz00340]
D SMD_1946 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SMD_1953 hisI; Phosphoribosyl-AMP cyclohydrolase) / Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D SMD_1951 hisA; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SMD_1950 hisH; Imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SMD_1952 hisF; Imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SMD_1949 hisB; Histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D SMD_1948 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_2723 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_1947 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SMD_2691 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SMD_4099 putative phenylalanine and histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SMD_2693 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D SMD_2690 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D SMD_2689 Formiminoglutamic iminohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D SMD_2692 N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D SMD_4194 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:smz00350]
D SMD_1948 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_2723 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_0018 aspC; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SMD_3924 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SMD_3923 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D SMD_0520 Maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D SMD_0519 Fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SMD_3577 adhC; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMD_0025 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SMD_1415 Succinate-semialdehyde dehydrogenase [NAD] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMD_3383 fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:smz00360]
D SMD_0029 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SMD_1948 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_2723 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_0018 aspC; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SMD_3924 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SMD_0483 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D SMD_0815 amidotransferase-related protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SMD_1072 benzene 1,2-dioxygenase, ferredoxin protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:smz00380]
D SMD_3929 Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D SMD_2738 qbsG; Kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D SMD_2737 Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D SMD_2736 nbaC; 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D SMD_2775 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_0170 GCDH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_0815 amidotransferase-related protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SMD_0296 katA; Catalase K03781 katE; catalase [EC:1.11.1.6]
D SMD_1237 katA2; Catalase K03781 katE; catalase [EC:1.11.1.6]
D SMD_3157 katE; Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smz00400]
D SMD_0813 aroH; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMD_3803 aroG; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMD_3189 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SMD_0193 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SMD_3832 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SMD_4041 aroE; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SMD_3188 aroK; Shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SMD_2680 aroA; 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SMD_3005 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SMD_3907 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMD_3905 pabA; Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SMD_3904 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SMD_2999 trpF; Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SMD_3903 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SMD_2990 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SMD_2992 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SMD_2681 pheA; Chorismate mutase I K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D SMD_1799 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SMD_1948 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_2723 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_0018 aspC; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SMD_0029 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:smz00410]
D SMD_1718 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SMD_1253 dat; Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D SMD_1717 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SMD_1401 aptA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_0229 Methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:smz00430]
D SMD_3514 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_1750 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_2745 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:smz00450]
D SMD_3202 metB; Cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SMD_2753 metH2; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SMD_2754 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SMD_2261 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SMD_0528 metC; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SMD_1075 Cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SMD_2112 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SMD_3453 selD; Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SMD_3450 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SMD_3080 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:smz00460]
D SMD_2232 Glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_0379 bglX; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2237 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2554 cgb; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_3514 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_1750 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_0742 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SMD_0766 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SMD_0607 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:smz00470]
D SMD_0484 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMD_0180 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_0645 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_2938 Aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMD_0387 chloromuconate cycloisomerase [EC:5.5.1.7] K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D SMD_3665 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SMD_1089 lysA; Aspartokinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SMD_0483 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:smz00480]
D SMD_3514 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_1750 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_3587 Glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SMD_3242 gshB; Glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D SMD_0297 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SMD_0569 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SMD_0824 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_2798 gst4; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_3338 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_2786 gst3; Glutathione S-transferase, unnamed subgroup K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_1427 gstA; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_1820 gst2; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_4221 Uncharacterized glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_3746 gst5; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_3794 Uncharacterized glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_3037 gor; Glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SMD_3868 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SMD_3630 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SMD_1729 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SMD_2805 gpo; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SMD_2761 btuE2; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SMD_4218 btuE; Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D SMD_3172 Peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D SMD_3952 speE; Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:smz00511]
D SMD_3618 nahB; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SMD_1969 bmnA; Beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D SMD_1957 L-asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis [PATH:smz00540]
D SMD_1326 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SMD_0649 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SMD_1328 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SMD_0845 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SMD_1325 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SMD_1467 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SMD_1039 kdsD; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SMD_1652 kdsA; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SMD_1038 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SMD_1468 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SMD_3533 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SMD_3534 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SMD_3767 htrB2; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SMD_3953 lpxO; Fe(2)/alpha-ketoglutarate-dependent dioxygenase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D SMD_3637 probable outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D SMD_2457 Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SMD_3146 Inner membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SMD_0942 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D SMD_3773 Lipid A core-O-antigen ligase and related enzymes K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:smz00541]
D SMD_1845 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMD_0533 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMD_3726 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMD_2759 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SMD_4144 Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SMD_0545 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMD_0544 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMD_0546 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMD_0547 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SMD_0548 manA; Mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D SMD_3694 glmU; N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SMD_0599 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SMD_1633 wbpO; Polysaccharide biosynthetic protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:smz00550]
D SMD_1041 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMD_1914 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMD_0644 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SMD_1091 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D SMD_1090 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D SMD_0639 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SMD_0180 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_0645 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_0640 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SMD_1333 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SMD_0102 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMD_0846 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMD_0641 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMD_0643 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMD_3210 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SMD_3429 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMD_3248 mrcB; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SMD_3174 pbpC; Penicillin-insensitive transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D SMD_3643 mrdA; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SMD_0638 ftsI; Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SMD_3638 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMD_3826 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMD_1174 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:smz00552]
D SMD_0102 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMD_0846 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:smz00543]
D SMD_2863 hmsR; Biofilm PGA synthesis N-glycosyltransferase PgaC K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D SMD_2864 hmsS; Biofilm PGA synthesis auxiliary protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:smz00730]
D SMD_3512 thiC; Thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SMD_1703 thiD; Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SMD_2922 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SMD_3378 thiG; Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SMD_3473 thiE; Thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SMD_0619 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SMD_3554 engC; Probable GTPase related to EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SMD_3044 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SMD_3489 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:smz00740]
D SMD_3768 ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SMD_0616 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SMD_0611 ribD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SMD_0298 hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D SMD_0617 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SMD_0615 ribE; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SMD_1196 ribF; Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SMD_0034 Nonspecific acid phosphatase precursor K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SMD_1893 ssuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SMD_2259 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D SMD_0728 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:smz00750]
D SMD_3185 pdxH; Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SMD_1798 pdxK; Pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SMD_2682 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMD_0700 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D SMD_0014 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D SMD_1941 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:smz00760]
D SMD_1437 nadC; Quinolinate phosphoribosyltransferase [decarboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SMD_0593 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SMD_0355 nadR; Nicotinamide-nucleotide adenylyltransferase,NadR family K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SMD_2743 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SMD_1870 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D SMD_1661 surE; 5-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SMD_0226 Nicotinamide-nucleotide adenylyltransferase,NadM family K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-]
D SMD_3063 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SMD_3228 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SMD_3883 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D SMD_2145 nadE2; NAD synthase (glutamine-hydrolysing) K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D SMD_3353 nadE; NAD synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D SMD_1675 C-terminal domain of CinA type S Protein Implicated in DNA repair function with RecA and MutS K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D SMD_0223 pncA; Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D SMD_0225 Nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D SMD_2744 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SMD_0732 pntAa; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SMD_0736 pntAb; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SMD_0737 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D SMD_1415 Succinate-semialdehyde dehydrogenase [NAD] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMD_2011 Succinate-semialdehyde dehydrogenase [NAD] K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:smz00770]
D SMD_2012 ilvK; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3517 ilvG; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMD_3518 ilvN; Acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D SMD_3516 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SMD_4038 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMD_1716 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SMD_4067 apbA; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SMD_1717 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SMD_0266 coaX; Pantothenate kinase type III, CoaX-like K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D SMD_0321 dfp; Phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SMD_3228 Nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D SMD_1747 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SMD_3362 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SMD_4149 hetI; 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D SMD_0740 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMD_1718 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:smz00780]
D SMD_4016 Biotin synthesis protein bioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D SMD_0492 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SMD_4093 3-oxoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SMD_0981 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMD_4090 fabF2; 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMD_0979 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_2369 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_1997 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_3221 fabG2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4015 fabG4; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4091 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_1327 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMD_4014 bioH; Biotin synthesis protein bioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D SMD_4013 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SMD_3231 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SMD_4012 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D SMD_0265 birA; Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:smz00785]
D SMD_3635 lipB; Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SMD_3634 lipA; Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_0412 aceE2; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_1685 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D SMD_3709 DLAT; Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMD_2774 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SMD_2775 sucB; Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SMD_3930 pdhA; Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SMD_3931 pdhB; Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SMD_2785 Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SMD_3933 Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SMD_3153 gcvP; Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SMD_3225 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SMD_3224 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:smz00790]
D SMD_4202 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SMD_3044 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SMD_1689 phoD; Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SMD_2779 phoD; phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SMD_0377 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SMD_1715 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SMD_3622 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SMD_1671 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SMD_0695 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SMD_0838 folC; Dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SMD_3768 ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SMD_0616 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SMD_0982 Para-aminobenzoate synthase, aminase component K25578 pabB; 4-amino-4-deoxychorismate synthase (2-amino-4-deoxychorismate-forming) component I [EC:2.6.1.123]
D SMD_0514 ptpS; Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SMD_2819 moaB3; Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D SMD_0029 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SMD_3621 FolM Alternative dihydrofolate reductase 1 K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D SMD_3307 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SMD_3306 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SMD_3871 NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SMD_2441 moaA; Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SMD_2440 moaBC; bifunctional Molybdenum cofactor biosynthesis protein MoaC / Molybdenum cofactor biosynthesis protein MoaB K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SMD_2437 moaE; Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SMD_2439 moeA; Molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SMD_2181 CTP:molybdopterin cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D SMD_2436 mobA; Molybdopterin-guanine dinucleotide biosynthesis protein MobB K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:smz00670]
D SMD_0695 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SMD_1858 folD; Methylenetetrahydrofolate dehydrogenase (NADP) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SMD_0607 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMD_1045 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SMD_3847 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMD_3776 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SMD_3225 gcvT; Aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SMD_2753 metH2; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SMD_2754 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SMD_0694 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SMD_0222 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D SMD_0654 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SMD_2257 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SMD_3467 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:smz00860]
D SMD_1279 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SMD_0750 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SMD_3474 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SMD_4044 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SMD_3718 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SMD_0121 hemD; Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SMD_3191 hemE; Uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SMD_4119 hemF; Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SMD_1630 hemN; Coproporphyrinogen III oxidase,oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D SMD_1320 Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D SMD_4175 hemH; Ferrochelatase, protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SMD_0120 Distant homolog of E. coli HemX protein in Xanthomonadaceae K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SMD_0367 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SMD_0366 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SMD_0704 Cob(I)alamin adenosyltransferase PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SMD_0501 Alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D SMD_3498 hemO; Heme oxygenase HemO, associated with heme uptake K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D SMD_1355 bfr3; Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D SMD_3173 bfr; Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D SMD_3890 bfr2; Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:smz00130]
D SMD_3995 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SMD_2886 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D SMD_0706 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D SMD_3651 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SMD_0707 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D SMD_3897 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D SMD_2468 entC; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SMD_0095 ComA operon protein 2 K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D SMD_3828 NAD(P)H dehydrogenase (quinone) K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SMD_2620 NAD(P)H oxidoreductase YRKL K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SMD_1995 NAD(P)H dehydrogenase, quinone family K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SMD_0744 wrbA; Trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SMD_3924 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:smz00900]
D SMD_2922 dxs; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D SMD_1331 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SMD_1657 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SMD_0753 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SMD_1658 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SMD_1722 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SMD_1199 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3048 ispA; Octaprenyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SMD_1096 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SMD_1333 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:smz00907]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_3481 Short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase
D SMD_1988 hmgcL; Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SMD_1846 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SMD_3416 tktA; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:smz00523]
D SMD_0545 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMD_0544 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMD_0546 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMD_0547 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:smz01053]
D SMD_2468 entC; Isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D SMD_2466 entB; Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D SMD_2463 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D SMD_2467 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SMD_2464 entF; hypothetical protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01055 Biosynthesis of vancomycin group antibiotics
D SMD_0544 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:smz00946]
D SMD_2232 Glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_0379 bglX; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2237 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2554 cgb; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:smz00311]
D SMD_1354 Penicillin acylase II K01434 pac; penicillin G amidase [EC:3.5.1.11]
D SMD_3327 L2 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:smz00332]
D SMD_2866 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SMD_2865 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:smz00261]
D SMD_1939 thrA; Aspartokinase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SMD_1089 lysA; Aspartokinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SMD_3003 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMD_1709 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SMD_1998 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:smz00521]
D SMD_1956 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1728 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_3616 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_0323 algC; Phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_0549 spgM; phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D SMD_2893 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SMD_0545 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMD_0544 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMD_0546 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMD_0547 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SMD_1956 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_1728 glk; Glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D SMD_3616 predicted N-acetylglucosamine kinase,glucokinase-like K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:smz00525]
D SMD_0545 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMD_0544 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:smz00401]
D SMD_1799 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SMD_1948 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_2723 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_0018 aspC; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
D SMD_2241 Tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D SMD_3907 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMD_3905 pabA; Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SMD_0978 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMD_1147 Malonyl CoA acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMD_0979 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_2369 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_1997 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_3221 fabG2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4015 fabG4; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4091 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SMD_0980 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SMD_4104 acpP2; Acyl carrier protein (ACP2) K02078 acpP; acyl carrier protein
D SMD_4105 Acyl carrier protein (ACP1) K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:smz00999]
D SMD_0668 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SMD_4041 aroE; Shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SMD_2232 Glucan 1,4-beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_0379 bglX; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2237 Periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SMD_2554 cgb; Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:smz00362]
D SMD_1846 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SMD_1847 Enoyl-CoA hydratase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SMD_0170 GCDH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D SMD_0815 amidotransferase-related protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00364 Fluorobenzoate degradation [PATH:smz00364]
D SMD_3022 clcD; Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:smz00625]
D SMD_0025 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SMD_3577 adhC; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:smz00361]
D SMD_3022 clcD; Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:smz00623]
D SMD_3022 clcD; Dienelactone hydrolase family K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:smz00633]
D SMD_2615 NADH:flavin oxidoreductases, Old Yellow Enzyme family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D SMD_3580 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D SMD_1846 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:smz00643]
D SMD_3923 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D SMD_0520 Maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D SMD_0519 Fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D SMD_0815 amidotransferase-related protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:smz00930]
D SMD_3133 Enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:smz00626]
D SMD_0025 Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D SMD_3577 adhC; S-(hydroxymethyl)glutathione dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:smz03020]
D SMD_0778 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMD_0779 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMD_0809 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMD_3444 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:smz03010]
D SMD_1839 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D SMD_1338 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D SMD_0791 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D SMD_0808 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D SMD_0802 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D SMD_2728 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D SMD_0781 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SMD_0799 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D SMD_3895 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D SMD_0784 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D SMD_0807 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D SMD_0780 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D SMD_0806 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D SMD_0798 rpsN; SSU ribosomal protein S14p (S29e) ## Zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D SMD_2959 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D SMD_1226 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D SMD_0794 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D SMD_2727 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SMD_0789 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D SMD_1194 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D SMD_0374 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D SMD_0775 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D SMD_0788 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D SMD_0785 rplC; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D SMD_0786 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D SMD_0797 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D SMD_0800 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D SMD_0777 rplL; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SMD_2726 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D SMD_0776 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SMD_0774 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D SMD_3896 rplM; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D SMD_0795 rplN; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D SMD_0804 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D SMD_0792 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D SMD_0810 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D SMD_0801 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D SMD_1229 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D SMD_2949 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D SMD_1191 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D SMD_0790 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D SMD_0787 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D SMD_0796 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D SMD_0756 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D SMD_1192 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D SMD_4132 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D SMD_0793 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D SMD_0803 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D SMD_3439 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SMD_0975 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SMD_4131 rpmG; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMD_4239 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D SMD_2950 RL35; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D SMD_1837 rpmJ2; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SMD_0337 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_0342 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4182 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4187 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4179 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0340 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_4184 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0345 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0341 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_4183 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_4178 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0346 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0347 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:smz00970]
D SMD_2910 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_2584 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_2588 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_2586 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_0338 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_4181 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_0343 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_4186 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_0863 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1920 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1699 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1701 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1700 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_3996 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1453 tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMD_0875 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_0876 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_0878 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_0877 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_1590 tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SMD_3894 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMD_0754 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMD_1713 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_2585 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_2589 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_2587 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_3375 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_0768 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1473 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1589 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1581 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1588 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_0864 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D SMD_0339 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_0344 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_4185 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_4180 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_2593 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1631 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_0868 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1362 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1365 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1366 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_2981 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_3304 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMD_0865 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMD_0866 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMD_3893 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D SMD_3763 tRNA-Ile; tRNA-Ile K14230 tRNA-Met; tRNA Met
D SMD_2965 tRNA-fMet; tRNA-Met K14230 tRNA-Met; tRNA Met
D SMD_2966 tRNA-fMet; tRNA-Met K14230 tRNA-Met; tRNA Met
D SMD_2916 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMD_2917 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMD_2944 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_0862 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_2859 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_2858 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_0939 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_0963 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_1682 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_2672 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_1210 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMD_0268 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMD_0769 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMD_0771 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SMD_0767 tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMD_0874 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_0987 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_1456 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_1457 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_3452 tRNA-seC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D SMD_1279 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SMD_0713 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SMD_1680 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMD_3323 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMD_2731 asnC; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMD_4167 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMD_4166 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMD_2952 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMD_2677 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMD_3450 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D SMD_2877 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMD_3080 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMD_3776 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SMD_0566 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMD_3066 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMD_1197 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMD_2013 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMD_0318 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMD_0559 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMD_1943 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMD_2948 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMD_2947 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMD_0336 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMD_0280 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:smz03060]
D SMD_0805 secY; Preprotein translocase secY subunit (TC 3.A.5.1.1) K03076 secY; preprotein translocase subunit SecY
D SMD_0772 Preprotein translocase subunit SecE (TC 3.A.5.1.1) K03073 secE; preprotein translocase subunit SecE
D SMD_2982 secG; Preprotein translocase subunit SecG (TC 3.A.5.1.1) K03075 secG; preprotein translocase subunit SecG
D SMD_1811 secD; Protein-export membrane protein SecD (TC 3.A.5.1.1) K03072 secD; preprotein translocase subunit SecD
D SMD_1812 secF; Protein-export membrane protein SecF (TC 3.A.5.1.1) K03074 secF; preprotein translocase subunit SecF
D SMD_1810 yajC; Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D SMD_4237 yidC; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMD_0651 secA; Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMD_0125 secB; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D SMD_1223 ffh; Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMD_0945 ffs; RNA component of signal recognition particle (Rfam family RF00169) K01983 ffs; SRP RNA
D SMD_1743 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) K03110 ftsY; fused signal recognition particle receptor
D SMD_4173 tatE; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D SMD_4172 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SMD_4171 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D SMD_0195 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMD_3128 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMD_1198 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SMD_2136 lspA2; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:smz04122]
D SMD_1392 Thiosulfate sulfurtransferase, rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SMD_2101 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SMD_2437 moaE; Molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SMD_2441 moaA; Molybdenum cofactor biosynthesis protein MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SMD_2438 moaD; sulfur carrier protein ThiS K03636 moaD; sulfur-carrier protein
D SMD_1856 Sulfur carrier protein adenylyltransferase ThiF K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D SMD_2440 moaBC; bifunctional Molybdenum cofactor biosynthesis protein MoaC / Molybdenum cofactor biosynthesis protein MoaB K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SMD_3377 thiS; Sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:smz03018]
D SMD_3892 nudH; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SMD_2823 rnE; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SMD_3855 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SMD_1655 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMD_2958 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SMD_0517 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SMD_1367 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMD_1296 deaD; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMD_3255 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SMD_3859 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SMD_1794 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMD_3813 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMD_1673 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SMD_0850 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SMD_0747 Transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D SMD_1714 pcnB; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:smz03030]
D SMD_0937 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_4134 dnaQ2; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_1323 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMD_0964 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMD_0985 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMD_3064 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMD_0568 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SMD_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMD_2781 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SMD_0371 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SMD_1108 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMD_1568 Single-stranded DNA-binding protein in PFGI-1-like cluster K03111 ssb; single-strand DNA-binding protein
D SMD_0936 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SMD_1324 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SMD_4122 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMD_2722 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:smz03410]
D SMD_1387 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SMD_3851 ung; Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SMD_1742 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SMD_2303 DNA-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SMD_0041 fpg; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SMD_2202 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SMD_1289 DNA methylation and regulatory protein Ada or K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SMD_1019 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SMD_3710 G:T/U mismatch-specific uracil/thymine DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D SMD_0521 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SMD_0331 ampN; Exodeoxyribonuclease III protein AmpN K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMD_2306 xthA2; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMD_4151 xthA3; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMD_4122 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMD_2004 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMD_2722 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:smz03420]
D SMD_1271 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SMD_2193 Excinuclease ABC subunit A paralog of unknown function K03701 uvrA; excinuclease ABC subunit A
D SMD_1190 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SMD_1455 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SMD_1471 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SMD_4127 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMD_4122 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMD_2722 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:smz03430]
D SMD_1238 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SMD_2900 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SMD_4127 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMD_2739 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SMD_2905 ex7L; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SMD_3047 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SMD_2004 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMD_1108 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMD_1568 Single-stranded DNA-binding protein in PFGI-1-like cluster K03111 ssb; single-strand DNA-binding protein
D SMD_1323 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMD_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMD_0964 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMD_3064 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMD_0985 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMD_0937 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_4134 dnaQ2; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_0568 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SMD_2722 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:smz03440]
D SMD_2004 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMD_1108 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMD_1568 Single-stranded DNA-binding protein in PFGI-1-like cluster K03111 ssb; single-strand DNA-binding protein
D SMD_0003 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SMD_3124 recO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SMD_0966 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D SMD_1678 recA; RecA protein K03553 recA; recombination protein RecA
D SMD_4122 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMD_3317 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SMD_3315 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SMD_3318 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SMD_3441 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMD_4210 recB; Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SMD_4211 recC; Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SMD_4209 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SMD_1323 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMD_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMD_0964 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMD_3064 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMD_0985 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMD_0937 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_4134 dnaQ2; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_0568 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SMD_3793 priA; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:smz03450]
D SMD_0022 ku; Ku domain protein K10979 ku; DNA end-binding protein Ku
D SMD_2199 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D SMD_0023 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:smz02010]
D SMD_2251 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SMD_2249 ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SMD_2250 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SMD_2433 modA; Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) K02020 modA; molybdate transport system substrate-binding protein
D SMD_2432 modB; Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) K02018 modB; molybdate transport system permease protein
D SMD_2431 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SMD_3546 Periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SMD_1411 potF; Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) K11073 potF; putrescine transport system substrate-binding protein
D SMD_1414 potI; Putrescine transport system permease protein PotI (TC 3.A.1.11.2) K11074 potI; putrescine transport system permease protein
D SMD_1413 potH; Putrescine transport system permease protein PotH (TC 3.A.1.11.2) K11075 potH; putrescine transport system permease protein
D SMD_1412 potG; Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SMD_1730 Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMD_4215 Uncharacterized ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D SMD_0554 ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SMD_4214 Uncharacterized ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SMD_0556 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SMD_4213 Uncharacterized ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SMD_4216 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D SMD_0555 ABC transporter ATP-binding protein USSDB6B K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SMD_4212 Uncharacterized ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SMD_1384 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D SMD_1385 phoX; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D SMD_1383 pstC; Phosphate transport system permease protein PstC (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D SMD_1382 pstA; Phosphate transport system permease protein PstA (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D SMD_1381 pstB; Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMD_3714 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SMD_3673 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SMD_3674 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SMD_0529 wzm; O-antigen export system permease protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D SMD_0530 wzt; ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D SMD_4057 ABC-type Na efflux pump, permease component K09696 natB; sodium transport system permease protein
D SMD_4058 ABC-type Na transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D SMD_1738 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D SMD_1739 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SMD_2845 Cytochrome c-type biogenesis protein CcmD,interacts with CcmCE K02196 ccmD; heme exporter protein D
D SMD_2844 ccmC; Cytochrome c-type biogenesis protein CcmC,putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D SMD_2843 ccmB; ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D SMD_2842 ccmA; ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SMD_0570 Predicted permease K07091 lptF; lipopolysaccharide export system permease protein
D SMD_0571 Predicted Permease K11720 lptG; lipopolysaccharide export system permease protein
D SMD_1035 lptB; Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SMD_3853 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMD_3854 ftsE; Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) K09812 ftsE; cell division transport system ATP-binding protein
D SMD_1466 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SMD_3374 colicin V secretion ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SMD_1306 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMD_2853 cydC; Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SMD_2854 cydD; Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SMD_1371 macB; Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SMD_2312 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SMD_2660 macB2; Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:smz02060]
D SMD_1027 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SMD_1028 ptsH; Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D SMD_1029 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SMD_2225 Phosphoenolpyruvate-protein phosphotransferase of PTS system K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D SMD_2227 fruA; PTS system, fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMD_2226 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SMD_1032 PTS system nitrogen-specific IIA component,PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:smz03070]
D SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D SMD_0590 xpsD; General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) K02453 gspD; general secretion pathway protein D
D SMD_2409 gspD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D SMD_2401 gspC; hypothetical protein K02452 gspC; general secretion pathway protein C
D SMD_0581 xpsF; General secretion pathway protein F / Type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F
D SMD_2407 gspF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D SMD_0582 xpsG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D SMD_2413 gspG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D SMD_0583 xpsH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D SMD_2402 gspH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D SMD_0584 xpsI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D SMD_2403 gspI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D SMD_0585 xpsJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D SMD_2404 gspJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D SMD_0586 pefK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D SMD_2412 gspK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D SMD_0587 pefL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D SMD_2411 gspL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D SMD_0588 xpsM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D SMD_2410 gspM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D SMD_0580 xpsE; General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SMD_2408 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SMD_4168 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SMD_1811 secD; Protein-export membrane protein SecD (TC 3.A.5.1.1) K03072 secD; preprotein translocase subunit SecD
D SMD_1812 secF; Protein-export membrane protein SecF (TC 3.A.5.1.1) K03074 secF; preprotein translocase subunit SecF
D SMD_0772 Preprotein translocase subunit SecE (TC 3.A.5.1.1) K03073 secE; preprotein translocase subunit SecE
D SMD_2982 secG; Preprotein translocase subunit SecG (TC 3.A.5.1.1) K03075 secG; preprotein translocase subunit SecG
D SMD_0805 secY; Preprotein translocase secY subunit (TC 3.A.5.1.1) K03076 secY; preprotein translocase subunit SecY
D SMD_1810 yajC; Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D SMD_4237 yidC; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMD_0651 secA; Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMD_1743 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) K03110 ftsY; fused signal recognition particle receptor
D SMD_0125 secB; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D SMD_1223 ffh; Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMD_4173 tatE; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D SMD_4172 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SMD_4171 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D SMD_2635 Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) K03194 virB1; type IV secretion system protein VirB1
D SMD_2634 Major pilus subunit of type IV secretion complex (VirB2) K03197 virB2; type IV secretion system protein VirB2
D SMD_2633 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) K03198 virB3; type IV secretion system protein VirB3
D SMD_2638 virB9; Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) K03204 virB9; type IV secretion system protein VirB9
D SMD_2630 trwI; Integral inner membrane protein of type IV secretion complex (VirB6) K03201 virB6; type IV secretion system protein VirB6
D SMD_2639 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D SMD_2637 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D SMD_2632 virB4; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D SMD_2636 virB11; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D SMD_0920 virD4; Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SMD_2641 virD4; Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:smz02020]
D SMD_0851 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SMD_0852 phoB; Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SMD_3044 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SMD_1689 phoD; Phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SMD_2779 phoD; phosphodiesterase/alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SMD_1384 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D SMD_1385 phoX; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D SMD_0262 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SMD_0261 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SMD_0034 Nonspecific acid phosphatase precursor K09474 phoN; acid phosphatase (class A) [EC:3.1.3.2]
D SMD_0914 sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SMD_0913 Two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SMD_0510 hypothetical protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SMD_3130 Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D SMD_1275 creC; Two-component response regulator CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D SMD_1274 creB; Two-component response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D SMD_4024 smeS; Sensory histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SMD_4025 smeR; Response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SMD_3873 smeI; membrane fusion protein precursor K07799 mdtA; membrane fusion protein, multidrug efflux system
D SMD_0912 Probable RND efflux membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D SMD_0911 cusA4; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07788 mdtB; multidrug efflux pump
D SMD_3874 smeJ; Acriflavin resistance plasma membrane protein K07788 mdtB; multidrug efflux pump
D SMD_0910 cusA5; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07789 mdtC; multidrug efflux pump
D SMD_3875 smeK; Acriflavin resistance plasma membrane protein K07789 mdtC; multidrug efflux pump
D SMD_4023 smeA; Membrane fusion protein of RND family multidrug efflux pump K18321 smeA; membrane fusion protein, multidrug efflux system
D SMD_4022 smeB; RND efflux system, inner membrane transporter K18322 smeB; multidrug efflux pump
D SMD_4021 smeC; RND efflux system, outer membrane lipoprotein K18323 smeC; outer membrane protein, multidrug efflux system
D SMD_1493 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_2367 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_2366 cusR; Copper-sensing two-component system response regulator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SMD_2135 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D SMD_2132 cusB; Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D SMD_2133 cusA3; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07787 cusA; copper/silver efflux system protein
D SMD_2075 fliC2; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2076 fliC; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2077 fliC3; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2046 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SMD_0478 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_2042 motA2; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_0325 kdpD; Osmosensitive K channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SMD_0324 kdpE; DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SMD_0328 kdpA; Potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D SMD_0327 kdpB; Potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D SMD_0326 kdpC; Potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D SMD_3547 Two-component system sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SMD_1259 qseC; sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SMD_3548 tctD; Tricarboxylate transport transcriptional regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D SMD_0366 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SMD_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SMD_0904 phoB2; two component transcriptional regulator, winged helix family K07671 prrA; two-component system, OmpR family, response regulator PrrA
D SMD_3084 lpiA; membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SMD_3333 hypothetical protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D SMD_3332 Transcriptional regulatory protein RstA K18073 parR; two-component system, OmpR family, response regulator ParR
D SMD_0392 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D SMD_1174 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMD_1265 TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins K19611 fepA; ferric enterobactin receptor
D SMD_3720 Autolysin sensor kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SMD_3719 Autolysis response regulater LytR K08083 algR; two-component system, LytTR family, response regulator AlgR
D SMD_4058 ABC-type Na transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D SMD_4057 ABC-type Na efflux pump, permease component K09696 natB; sodium transport system permease protein
D SMD_1407 sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SMD_0761 Signal transduction histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SMD_0763 Signal transduction histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SMD_0166 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_0760 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_2925 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_0320 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_2149 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_1724 BarA-associated response regulator UvrY (= GacA = SirA) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SMD_1681 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator
D SMD_0167 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SMD_3220 Beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SMD_0293 Two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMD_0294 Two-component system regulatory protein K07693 desR; two-component system, NarL family, response regulator DesR
D SMD_1341 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SMD_1344 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SMD_1339 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_1343 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_0597 mrkC; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D SMD_1342 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D SMD_2505 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D SMD_0960 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SMD_0954 SAF domain K02279 cpaB; pilus assembly protein CpaB
D SMD_2508 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D SMD_0953 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D SMD_2509 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D SMD_2510 Probable pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D SMD_0952 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SMD_2511 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SMD_0951 type II secretion system protein K12510 tadB; tight adherence protein B
D SMD_2512 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D SMD_0950 Type II/IV secretion system protein TadC,associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D SMD_2513 type II secretion system protein K12511 tadC; tight adherence protein C
D SMD_2514 Flp pilus assembly protein TadD, contains TPR repeats K27079 tadD; tight adherence protein D
D SMD_2516 hypothetical protein K27080 tadG; tight adherence protein G
D SMD_1346 glnD; [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D SMD_0104 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D SMD_2138 glnB2; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D SMD_3957 glnB3; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D SMD_0112 glnL; Two-component system sensor protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SMD_0113 glnG; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SMD_0103 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_1410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_3994 Short chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3542 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D SMD_3356 pilS; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SMD_3357 hydG; Type IV fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D SMD_2069 rpoN2; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D SMD_1034 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D SMD_3359 pilA; Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D SMD_3781 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D SMD_2029 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SMD_1927 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SMD_4079 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_1240 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3161 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2099 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2595 mcpA; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2030 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2031 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3725 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3820 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_4177 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2035 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2033 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_2039 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_1889 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_2036 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2043 cheA2; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2045 cheY2; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2037 cheY; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2027 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_1928 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_2089 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D SMD_3238 pilJ; pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ
D SMD_3239 pilI; type IV pili signal transduction protein PilI K02659 pilI; twitching motility protein PilI
D SMD_3237 frzE; Chemotaxis protein cheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SMD_3241 pilG; twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D SMD_3170 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3240 pilH2; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3236 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D SMD_3235 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D SMD_2165 Phytochrome, two-component sensor histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D SMD_1924 two-component system regulatory protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D SMD_2067 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D SMD_2015 rpfC; Sensory/regulatory protein rpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D SMD_2014 rpfG; response regulator K13815 rpfG; two-component system, response regulator RpfG
D SMD_3900 crp; Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SMD_2016 rpfF; RpfF protein K13816 rpfF; DSF synthase
D SMD_1721 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D SMD_1720 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA
D SMD_1430 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D SMD_1431 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SMD_1432 petC; ubiquinol cytochrome C oxidoreductase,cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D SMD_0168 Cytochrome c K08738 CYC; cytochrome c
D SMD_2855 cydA; Cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SMD_4109 cioA; putative Cytochrome bd2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SMD_2856 cydB; Cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SMD_4108 cioB; putative Cytochrome bd2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SMD_2857 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D SMD_1469 Low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SMD_0599 wecB; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SMD_2388 Iron siderophore sensor protein K07165 fecR; transmembrane sensor
D SMD_1205 Putative transmembrane sensor K07165 fecR; transmembrane sensor
D SMD_1687 putative FecR K07165 fecR; transmembrane sensor
D SMD_2571 fecR2; FecR protein K07165 fecR; transmembrane sensor
D SMD_2416 fecR; Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system K07165 fecR; transmembrane sensor
D SMD_3501 Iron siderophore sensor protein K07165 fecR; transmembrane sensor
D SMD_2091 flgM; Negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:smz04148]
D SMD_0276 arcA; Arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1]
D SMD_1430 petA; Ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:smz02024]
D SMD_1673 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SMD_3907 trpE; Anthranilate synthase, aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMD_3905 pabA; Anthranilate synthase, amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SMD_0813 aroH; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMD_3803 aroG; 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMD_0324 kdpE; DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SMD_1407 sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SMD_1772 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D SMD_0922 trbB; Conjugative transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SMD_0923 trbC; Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SMD_0924 trbD; Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D SMD_0925 trbE; Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SMD_0926 trbJ; Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SMD_0928 trbL; Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SMD_0929 trbF; Conjugative transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SMD_0930 trbG; Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SMD_0931 trbI; Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D SMD_2016 rpfF; RpfF protein K13816 rpfF; DSF synthase
D SMD_2017 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SMD_2015 rpfC; Sensory/regulatory protein rpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D SMD_2014 rpfG; response regulator K13815 rpfG; two-component system, response regulator RpfG
D SMD_3900 crp; Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SMD_1280 zur; Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SMD_3768 ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SMD_0611 ribD; Diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SMD_3656 smeF; RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SMD_4237 yidC; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMD_0741 StmPr1; Extracellular protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D SMD_0579 Protease K14645 K14645; serine protease [EC:3.4.21.-]
D SMD_0772 Preprotein translocase subunit SecE (TC 3.A.5.1.1) K03073 secE; preprotein translocase subunit SecE
D SMD_2982 secG; Preprotein translocase subunit SecG (TC 3.A.5.1.1) K03075 secG; preprotein translocase subunit SecG
D SMD_0805 secY; Preprotein translocase secY subunit (TC 3.A.5.1.1) K03076 secY; preprotein translocase subunit SecY
D SMD_1810 yajC; Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D SMD_0651 secA; Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMD_1743 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) K03110 ftsY; fused signal recognition particle receptor
D SMD_0125 secB; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D SMD_1223 ffh; Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMD_1690 plcC; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:smz02030]
D SMD_4079 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_1240 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3161 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2099 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2595 mcpA; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2030 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2031 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3725 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3820 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_4177 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2035 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2036 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2043 cheA2; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2033 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_2039 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_1889 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_2045 cheY2; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2037 cheY; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2044 cheZ; Chemotaxis response-phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D SMD_2027 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_1928 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_2089 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D SMD_2028 cheD; Chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D SMD_2029 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SMD_1927 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SMD_2063 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SMD_2057 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SMD_2056 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SMD_0478 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_2042 motA2; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_0477 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SMD_2041 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:smz02040]
D SMD_2065 fliE; Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SMD_2064 fliF; Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D SMD_2063 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SMD_2062 fliH; Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SMD_2061 fliI; Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SMD_2060 fliJ; Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D SMD_2059 fliK; Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SMD_2058 fliL; Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D SMD_2057 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SMD_2056 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SMD_2055 fliO; Flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SMD_2054 fliP; Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SMD_2053 fliQ; Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SMD_2052 fliR; Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SMD_2049 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SMD_2050 flhB; Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SMD_2090 flgA; Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SMD_2088 flgB; Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SMD_2087 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SMD_2086 flgD; Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D SMD_2085 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SMD_2084 flgF; Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SMD_2083 flgG; Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SMD_2082 flgH; Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SMD_2081 flgI; Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SMD_2080 flgK; Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D SMD_2079 flgL; Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SMD_2078 flgJ; Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SMD_2075 fliC2; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2076 fliC; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2077 fliC3; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2074 fliD; Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D SMD_2073 fliS; Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D SMD_0478 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_2042 motA2; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_0477 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SMD_2041 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SMD_2091 flgM; Negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SMD_3765 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SMD_2067 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D SMD_2069 rpoN2; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D SMD_1034 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D SMD_2046 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SMD_1655 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:smz04980]
D SMD_0704 Cob(I)alamin adenosyltransferase PduO K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D SMD_2753 metH2; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D SMD_2754 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:smz01501]
D SMD_0332 ampG; AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SMD_3119 nagZ; Beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SMD_3328 ampR; transcriptional activator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D SMD_3220 Beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SMD_3411 Ferric siderophore transport system, periplasmic binding protein TonB K02172 blaR1; bla regulator protein blaR1
D SMD_3412 blaI; Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SMD_3327 L2 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SMD_3333 hypothetical protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D SMD_3332 Transcriptional regulatory protein RstA K18073 parR; two-component system, OmpR family, response regulator ParR
D SMD_3392 smeM; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_2748 smeG; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3658 smeD; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_1829 smmG; Probable Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3657 smeE; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D SMD_2749 acrD; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D SMD_3391 smeN; RND multidrug efflux transporter Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D SMD_3656 smeF; RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SMD_1980 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_2316 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_1981 Two-component response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D SMD_1982 smeY; Membrane fusion protein of RND family multidrug efflux pump K18145 adeA; membrane fusion protein, multidrug efflux system
D SMD_1983 smeZ; RND efflux system, inner membrane transporter CmeB K18146 adeB; multidrug efflux pump
D SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D SMD_3429 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMD_3643 mrdA; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SMD_0638 ftsI; Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SMD_2343 L1 beta-lactamase K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:smz01502]
D SMD_0392 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D SMD_0180 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_0645 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_0484 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMD_0640 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SMD_0641 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMD_0643 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMD_1174 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:smz01503]
D SMD_0262 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SMD_0261 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SMD_3333 hypothetical protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D SMD_3332 Transcriptional regulatory protein RstA K18073 parR; two-component system, OmpR family, response regulator ParR
D SMD_2457 Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SMD_3146 Inner membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SMD_2901 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SMD_3130 Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D SMD_3593 dsbA; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SMD_3594 dsbA2; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SMD_3392 smeM; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_2748 smeG; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3658 smeD; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_1829 smmG; Probable Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3657 smeE; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D SMD_2749 acrD; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D SMD_3391 smeN; RND multidrug efflux transporter Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D SMD_1326 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SMD_3084 lpiA; membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:smz01000]
C 01001 Protein kinases [BR:smz01001]
D SMD_0851 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SMD_0262 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SMD_0914 sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SMD_0510 hypothetical protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SMD_1275 creC; Two-component response regulator CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D SMD_4024 smeS; Sensory histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SMD_1493 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_2367 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_0325 kdpD; Osmosensitive K channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SMD_3547 Two-component system sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SMD_1259 qseC; sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SMD_3333 hypothetical protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D SMD_1980 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_2316 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_0903 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SMD_1407 sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SMD_0761 Signal transduction histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SMD_0763 Signal transduction histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SMD_0167 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SMD_0293 Two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMD_3720 Autolysin sensor kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SMD_0112 glnL; Two-component system sensor protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SMD_3356 pilS; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SMD_2093 Histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D SMD_2036 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2043 cheA2; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_3237 frzE; Chemotaxis protein cheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SMD_2165 Phytochrome, two-component sensor histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D SMD_2015 rpfC; Sensory/regulatory protein rpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D SMD_1721 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D SMD_1929 two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:smz01009]
D SMD_0664 sahH; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SMD_1219 hsp90xo; Hsp90xo protein K04079 HSP90A; molecular chaperone HtpG
D SMD_1745 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D SMD_0938 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:smz01002]
D SMD_1198 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SMD_2136 lspA2; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SMD_3361 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SMD_2506 probable prepilin peptidase transmembrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SMD_2567 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMD_1861 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMD_4169 GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMD_1409 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D SMD_3374 colicin V secretion ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SMD_0841 purF; Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SMD_0064 gltB; Glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMD_3613 Glucosamine-6-phosphate deaminase [isomerizing],alternative K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMD_3685 glmS; Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMD_0512 Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SMD_1352 asnB; Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SMD_2784 asnB2; Asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SMD_1773 hchA; Chaperone protein hchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D SMD_1081 ThiJ/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D SMD_0005 hypothetical protein K07052 K07052; CAAX protease family protein
D SMD_3261 hypothetical protein K07052 K07052; CAAX protease family protein
D SMD_3650 Aminopeptidase N K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
D SMD_3147 Dipeptidyl carboxypeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D SMD_3679 prlC; Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D SMD_0192 dcp; Dipeptidyl carboxypeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D SMD_2806 Dipeptidyl carboxypeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D SMD_3991 hypothetical protein K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SMD_0467 Metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SMD_1269 Metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SMD_3030 Metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SMD_3031 Metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SMD_1174 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMD_0392 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D SMD_0173 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D SMD_0297 Peptidase B K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SMD_0569 pepA; Cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SMD_4229 Dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SMD_1350 dapE; N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SMD_1897 Peptidase M20D, amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D SMD_3598 peptidase, M23/M37 family K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SMD_3163 peptidase, M23/M37 family K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SMD_1345 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SMD_1248 map2; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SMD_3461 pepQ; Xaa-Pro dipeptidase PepQ K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D SMD_3462 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SMD_1669 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SMD_2894 htpX; Probable protease htpX homolog K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SMD_2906 Zn-dependent protease with chaperone function K23010 OMA1; metalloendopeptidase OMA1, mitochondrial [EC:3.4.24.-]
D SMD_0853 Protease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D SMD_1330 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SMD_3411 Ferric siderophore transport system, periplasmic binding protein TonB K02172 blaR1; bla regulator protein blaR1
D SMD_0844 peptidyl-Asp metalloendopeptidase K23743 E3.4.24.33; peptidyl-Asp metalloendopeptidase [EC:3.4.24.33]
D SMD_0263 Inner membrane protein K09933 mtfA; MtfA peptidase
D SMD_3130 Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D SMD_0304 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D SMD_0741 StmPr1; Extracellular protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D SMD_0579 Protease K14645 K14645; serine protease [EC:3.4.21.-]
D SMD_3670 Prolyl oligopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D SMD_4050 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SMD_0308 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SMD_3668 ptrB; Protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D SMD_3638 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMD_3826 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMD_0870 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SMD_0872 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D SMD_1677 lexA; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SMD_0195 lepB2; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMD_3128 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMD_0722 pip; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SMD_2324 pip2; Proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D SMD_0351 ctpA; Carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SMD_3633 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SMD_3727 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SMD_1354 Penicillin acylase II K01434 pac; penicillin G amidase [EC:3.5.1.11]
D SMD_3789 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D SMD_0765 Cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D SMD_3034 integral membrane rhomboid family serine protease MJ0610.1 K07059 K07059; rhomboid family protein
D SMD_3662 hslV; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SMD_0766 Isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SMD_3514 Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_1750 ggt; Gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SMD_3050 TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex (PMID 12029038) K03592 pmbA; PmbA protein
D SMD_0085 TldD family protein, Actinobacterial subgroup K03568 tldD; TldD protein
D SMD_0086 TldD family protein, Actinobacterial subgroup K03568 tldD; TldD protein
D SMD_3052 tldD; TldD protein, part of proposed TldE/TldD proteolytic complex (PMID 12029038) K03568 tldD; TldD protein
D SMD_3175 Alpha-2-macroglobulin K06894 yfhM; alpha-2-macroglobulin
D SMD_3167 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D SMD_3168 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:smz01003]
D SMD_2428 glgA; Glycogen synthase, ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D SMD_3210 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SMD_3174 pbpC; Penicillin-insensitive transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D SMD_3248 mrcB; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SMD_3429 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMD_3722 Glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D SMD_2863 hmsR; Biofilm PGA synthesis N-glycosyltransferase PgaC K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D SMD_4133 UDP-glucose:sterol glucosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D SMD_3346 otsA; Alpha,alpha-trehalose-phosphate synthase [UDP-forming] K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:smz01005]
D SMD_1326 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D SMD_1325 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D SMD_0649 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D SMD_1328 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D SMD_0845 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SMD_1467 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D SMD_3534 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SMD_3767 htrB2; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D SMD_3953 lpxO; Fe(2)/alpha-ketoglutarate-dependent dioxygenase LpxO K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D SMD_3637 probable outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D SMD_3533 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D SMD_2457 Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SMD_3146 Inner membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D SMD_0942 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D SMD_1652 kdsA; 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D SMD_1468 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D SMD_1038 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D SMD_1039 kdsD; Arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D SMD_3773 Lipid A core-O-antigen ligase and related enzymes K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D SMD_0941 ADP-heptose--lipooligosaccharide heptosyltransferase II K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D SMD_0535 Glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D SMD_3209 gtrB; Glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:smz01011]
D SMD_1041 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMD_1914 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMD_0644 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SMD_0639 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SMD_0180 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_0645 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMD_0484 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMD_0641 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMD_0643 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMD_0102 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMD_0846 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMD_1195 murJ; Proposed peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SMD_3429 mrcA; Multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMD_3248 mrcB; Multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D SMD_3174 pbpC; Penicillin-insensitive transglycosylase K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D SMD_3643 mrdA; Penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SMD_0638 ftsI; Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SMD_3638 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMD_3826 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMD_3210 mtgA; Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SMD_0392 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D SMD_1174 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMD_3598 peptidase, M23/M37 family K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SMD_3163 peptidase, M23/M37 family K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D SMD_3603 Soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SMD_0108 mltA; Membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D SMD_3640 mltB; Membrane-bound lytic murein transglycosylase B precursor K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D SMD_0933 mltD; Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SMD_3010 mltD; Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SMD_0983 yceG; protein YceG like K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SMD_3639 rlpA; Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SMD_2901 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:smz01004]
D SMD_0978 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMD_1147 Malonyl CoA acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMD_0976 fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase,KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SMD_0492 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase, KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SMD_4093 3-oxoacyl-[ACP] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D SMD_0981 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase, KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMD_4090 fabF2; 3-oxoacyl-[ACP] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMD_0979 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_2369 Short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_1997 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_3221 fabG2; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4015 fabG4; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_4091 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMD_0493 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D SMD_1327 fabZ; (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMD_1813 Short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D SMD_0683 tesA; Arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D SMD_1185 tesB; Acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D SMD_0038 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D SMD_2158 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D SMD_2477 Possible linoleoyl-CoA desaturase (delta(6)-desaturase) K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D SMD_4155 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SMD_0821 prpE; Propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D SMD_2017 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SMD_0057 plsB; Glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
C 01008 Polyketide biosynthesis proteins [BR:smz01008]
D SMD_2466 entB; Isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D SMD_2467 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D SMD_2464 entF; hypothetical protein K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01006 Prenyltransferases [BR:smz01006]
D SMD_3048 ispA; Octaprenyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D SMD_1096 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SMD_1333 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SMD_1672 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SMD_3995 ubiA; 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D SMD_0367 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:smz01007]
D SMD_1279 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SMD_0713 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SMD_2895 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SMD_0336 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMD_0280 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SMD_2877 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMD_0318 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMD_3080 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMD_1197 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMD_0566 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMD_3066 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMD_2013 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMD_3323 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMD_2731 asnC; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMD_1943 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMD_4167 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMD_4166 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMD_2677 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMD_0559 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMD_2952 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMD_1680 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMD_2948 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMD_2947 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMD_3555 Aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMD_0018 aspC; Aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D SMD_2841 aminotransferase, class I and II K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D SMD_1948 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_2723 Periplasmic aromatic amino acid aminotransferase beta precursor K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMD_0833 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SMD_4013 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SMD_1401 aptA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D SMD_3477 astC; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SMD_1253 dat; Aminotransferase, class III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D SMD_3231 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SMD_3474 hemL; Glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SMD_0740 ilvE; Branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMD_2682 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:smz00194]
D SMD_3697 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SMD_3698 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SMD_3699 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SMD_3700 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SMD_3701 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SMD_3702 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SMD_3703 atpE; ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SMD_3704 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:smz03000]
D SMD_1595 Site-specific DNA methylase-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMD_1923 Transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D SMD_3987 putative transcriptional regulator AraC/XylS family, with a AraC_E_bind effector binding domain K13653 K13653; AraC family transcriptional regulator
D SMD_3509 Transcriptional regulator K07506 K07506; AraC family transcriptional regulator
D SMD_2525 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D SMD_2914 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SMD_1289 DNA methylation and regulatory protein Ada or K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SMD_1891 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D SMD_2275 Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D SMD_2258 metR; Transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D SMD_0718 oxyR; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SMD_1246 Transcriptional regulator lysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SMD_1157 probable LysR-family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SMD_3396 cysB; Regulatory protein CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D SMD_3328 ampR; transcriptional activator AmpR K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase
D SMD_1762 smeRv; LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D SMD_0198 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D SMD_2993 Glycine cleavage system transcriptional activator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator
D SMD_4004 agaR; Transcriptional repressor of aga operon K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D SMD_0028 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMD_2236 sal operon transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMD_3614 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMD_1965 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMD_2831 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMD_1118 cytR; Transcriptional (co)regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D SMD_2224 Transcriptional regulator lacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D SMD_2688 Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D SMD_2545 lctR; Lactate-responsive regulator LldR in Enterobacteria, GntR family K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D SMD_2020 betI; HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D SMD_3659 smeT; transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D SMD_1903 Transcriptional regulator, TetR family K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D SMD_1887 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SMD_1910 Transcriptional regulator, TetR family K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D SMD_3529 Transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SMD_3584 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SMD_2479 Unsaturated fatty acid biosythesis repressor FabR, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D SMD_2934 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D SMD_0482 lrp; Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SMD_0030 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SMD_3597 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SMD_2419 Transcriptional regulator, AsnC family K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
D SMD_1772 transcriptional regulator, LuxR family K18098 bjaR1; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
D SMD_4203 Transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D SMD_3807 Transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D SMD_1558 merR; Mercuric resistance operon regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D SMD_2144 heavy metal resistance transcriptional regulator Hmrr, MerR family K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D SMD_2583 zntR; Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SMD_1008 soxR; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D SMD_1961 cueR; HTH-type transcriptional regulator cueR K19592 golS; MerR family transcriptional regulator, gold-responsive activator of gol and ges genes
D SMD_1788 fur; Ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SMD_1280 zur; Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D SMD_3900 crp; Cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SMD_1942 fnr; transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SMD_2434 fnr2; Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D SMD_0133 arsR; Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SMD_1494 arsR2; Transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SMD_1126 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SMD_0228 Transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D SMD_1316 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D SMD_1499 Transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D SMD_2482 Mn-dependent transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D SMD_3412 blaI; Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SMD_0265 birA; Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SMD_3840 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SMD_3183 prpR; Propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D SMD_0355 nadR; Nicotinamide-nucleotide adenylyltransferase,NadR family K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D SMD_2067 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D SMD_3849 helix-turn-helix domain protein K07726 K07726; putative transcriptional regulator
D SMD_1129 transcriptional regulator K07727 K07727; putative transcriptional regulator
D SMD_0356 putA; Proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D SMD_3578 Uncharacterized protein YaiN in in formaldehyde detoxification operon K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D SMD_2832 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D SMD_0890 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_1502 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_4146 parB; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_1792 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D SMD_1708 Glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor
D SMD_0717 rnk; Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D SMD_1576 Transcriptional regulator in PFGI-1-like cluster K07733 alpA; prophage regulatory protein
D SMD_2734 pai2; transcriptional regulator protein Pai2 K07734 paiB; transcriptional regulator
D SMD_1021 yqgE; UPF0301 protein YqgE K07735 algH; putative transcriptional regulator
D SMD_2880 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D SMD_0610 nrdR; Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D SMD_0635 mraZ; Cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:smz03021]
D SMD_0809 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMD_0778 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMD_0779 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMD_3444 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMD_3765 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SMD_3132 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SMD_3095 RNA polymerase ECF-type sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SMD_1804 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D SMD_3850 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D SMD_2069 rpoN2; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D SMD_1034 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D SMD_2046 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SMD_2963 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SMD_0618 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D SMD_0773 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SMD_1433 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D SMD_1434 sspB; Stringent starvation protein B K03600 sspB; stringent starvation protein B
D SMD_2880 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D SMD_2001 greA; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D SMD_3012 greB; Transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D SMD_3859 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:smz03019]
D SMD_2823 rnE; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SMD_3054 rnG; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D SMD_3126 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMD_1367 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMD_2815 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D SMD_2617 orn; 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SMD_3855 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D SMD_0517 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D SMD_1296 deaD; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMD_3255 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SMD_1655 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMD_2958 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SMD_3859 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SMD_1794 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMD_3813 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMD_1673 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SMD_0850 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SMD_0747 Transcriptional regulator K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D SMD_1714 pcnB; Poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SMD_3892 nudH; Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D SMD_1681 csrA; Carbon storage regulator K03563 csrA; carbon storage regulator
D SMD_1030 Hypothetical ATP-binding protein UPF0042,contains P-loop K06958 rapZ; RNase adapter protein RapZ
D SMD_3253 hrpA; ATP dependent RNA helicase K03578 hrpA; ATP-dependent helicase HrpA [EC:5.6.2.6]
D SMD_4070 hrpB; ATP-dependent RNA helicase K03579 hrpB; ATP-dependent helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:smz03011]
D SMD_1839 rpsA; SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D SMD_1338 rpsB; SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D SMD_0791 rpsC; SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D SMD_0808 rpsD; SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D SMD_0802 rpsE; SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D SMD_2728 rpsF; SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D SMD_0781 rpsG; SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D SMD_0799 rpsH; SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D SMD_3895 rpsI; SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D SMD_0784 rpsJ; SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D SMD_0807 rpsK; SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D SMD_0780 rpsL; SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D SMD_0806 rpsM; SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D SMD_0798 rpsN; SSU ribosomal protein S14p (S29e) ## Zinc-independent K02954 RP-S14; small subunit ribosomal protein S14
D SMD_2959 rpsO; SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D SMD_1226 rpsP; SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D SMD_0794 rpsQ; SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D SMD_2727 rpsR; SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D SMD_0789 rpsS; SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D SMD_1194 rpsT; SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D SMD_0374 rpsU; SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D SMD_1286 hypothetical protein K19033 PSRP4; 30S ribosomal protein S31
D SMD_0775 rplA; LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D SMD_0788 rplB; LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D SMD_0785 rplC; LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D SMD_0786 rplD; LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D SMD_0797 rplE; LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D SMD_0800 rplF; LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D SMD_2726 rplI; LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D SMD_0776 rplJ; LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D SMD_0774 rplK; LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D SMD_0777 rplL; LSU ribosomal protein L7/L12 (P1/P2) K02935 RP-L7; large subunit ribosomal protein L7/L12
D SMD_3896 rplM; LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D SMD_0795 rplN; LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D SMD_0804 rplO; LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D SMD_0792 rplP; LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D SMD_0810 rplQ; LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D SMD_0801 rplR; LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D SMD_1229 rplS; LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D SMD_2949 rplT; LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D SMD_1191 rplU; LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D SMD_0790 rplV; LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D SMD_0787 rplW; LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D SMD_0796 rplX; LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D SMD_1192 rpmA; LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D SMD_4132 rpmB; LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D SMD_0793 rpmC; LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D SMD_0803 rpmD; LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D SMD_3439 rpmE; LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D SMD_0975 rpmF; LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D SMD_4131 rpmG; LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D SMD_4239 rpmH; LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D SMD_2950 RL35; LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D SMD_1837 rpmJ2; LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D SMD_0756 rplY; LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D SMD_0341 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_4183 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_4178 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0346 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0347 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0337 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_0342 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4182 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4187 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4179 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0340 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_4184 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0345 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:smz03009]
D SMD_3126 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMD_2617 orn; 3'-to-5' oligoribonuclease (orn) K13288 orn; oligoribonuclease [EC:3.1.-.-]
D SMD_3125 era; GTP-binding protein Era K03595 era; GTPase
D SMD_1193 obg; GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D SMD_2880 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D SMD_2963 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SMD_0618 nusB; Transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D SMD_0773 nusG; Transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SMD_0490 rsuA; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SMD_0699 ksgA; Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SMD_3775 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SMD_0489 rsmC; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SMD_1746 Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SMD_3232 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SMD_4148 gidB; rRNA small subunit methyltransferase, glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SMD_0636 mraW; rRNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SMD_0630 rRNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SMD_1369 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SMD_1668 ftsJ; Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D SMD_3061 rlmH; LSU m3Psi1915 methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SMD_4230 rlmI; LSU m5C1962 methyltransferase RlmI K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SMD_1273 Protein involved in catabolism of external DNA K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D SMD_1395 rlmL; 23S rRNA (guanine-N-2-)-methyltransferase rlmL EC 2.1.1.-) K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D SMD_0709 Putative RNA 2'-O-ribose methyltransferase mtfA K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D SMD_1850 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SMD_3122 rumA; 23S rRNA (Uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SMD_0820 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SMD_1817 rluA2; Similar to ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SMD_0831 rluB2; Pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SMD_2836 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SMD_2822 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D SMD_3350 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SMD_4072 rluE; Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D SMD_1299 rluF; tRNA pseudouridine synthase A K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D SMD_3101 rluF2; pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D SMD_3388 yfiF; hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SMD_0564 rimI; Ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SMD_1921 Aminoglycoside N6'-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SMD_3372 rimK; Ribosomal protein S6 glutaminyl transferase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D SMD_1227 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D SMD_3014 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D SMD_3838 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SMD_3006 yfcB; Hypothetical adenine-specific methylase yfcB K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D SMD_2772 Putative cytoplasmic protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D SMD_2823 rnE; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D SMD_3054 rnG; Cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D SMD_1022 Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SMD_1823 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D SMD_1296 deaD; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMD_3554 engC; Probable GTPase related to EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SMD_1855 engA; GTP-binding protein EngA K03977 engA; GTPase
D SMD_1674 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D SMD_3784 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SMD_3443 spoT; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SMD_2961 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SMD_2964 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D SMD_1294 hypothetical protein K14761 rlbA; ribosome-associated protein
D SMD_3062 ybeB; iojap protein ribosome-associated protein K09710 ybeB; ribosome-associated protein
D SMD_1421 metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D SMD_1667 RNA binding protein K07574 yhbY; RNA-binding protein
D SMD_3051 Putative alpha helix protein K09889 yjgA; ribosome-associated protein
D SMD_1033 yhbH; Ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D SMD_0758 ychF; GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D SMD_0974 COG1399 protein, clustered with ribosomal protein L32p K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:smz03016]
D SMD_2815 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D SMD_3604 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SMD_4076 rtcB; Protein RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D SMD_1279 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SMD_0559 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMD_1197 ileS; Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMD_3066 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMD_3080 metG; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMD_0713 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SMD_0318 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMD_2013 lysS; Lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMD_3323 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMD_1680 alaS; Alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMD_2731 asnC; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMD_2952 thrS; Threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMD_2677 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMD_2877 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMD_0566 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMD_1943 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMD_2948 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMD_2947 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMD_0336 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMD_0280 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SMD_3766 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SMD_0967 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SMD_3379 trmB; tRNA (guanine46-N7-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SMD_3000 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SMD_2960 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SMD_1659 truD; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D SMD_3784 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SMD_1672 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SMD_4235 trmE; GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SMD_4020 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SMD_3453 selD; Selenide,water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D SMD_3229 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SMD_4238 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SMD_0632 rnpB; Ribonuclease P RNA component (Rfam family RF00010) K01978 rnpB; M1 RNA
D SMD_1375 rnt; Ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D SMD_3455 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D SMD_2908 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D SMD_0605 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D SMD_4167 glyQ; Glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMD_4166 glyS; Glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMD_2895 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D SMD_0661 YbaK family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SMD_2618 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SMD_0259 dusA; tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D SMD_0673 dusB; tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SMD_1426 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SMD_0999 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D SMD_1228 trmD; tRNA (Guanine37-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SMD_3388 yfiF; hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D SMD_2892 trmJ; tRNA:Cm32/Um32 methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D SMD_0171 cspR; tRNA (cytosine34-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SMD_0188 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D SMD_0820 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SMD_1817 rluA2; Similar to ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D SMD_2101 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SMD_0058 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D SMD_2730 sufA; Iron binding protein SufA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D SMD_1731 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress K06980 ygfZ; tRNA-modifying protein YgfZ
D SMD_1808 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SMD_3306 Queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SMD_0514 ptpS; Queuosine biosynthesis QueD, PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SMD_3307 Queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SMD_3871 NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SMD_2904 Iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SMD_0224 Protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SMD_1809 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SMD_3046 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SMD_3244 Inactive homolog of metal-dependent proteases,putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SMD_0375 gcp; YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SMD_2902 yjeF; ATPase YjeE, predicted to have essential role in cell wall biosynthesis K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SMD_2791 HesA/MoeB/ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D SMD_1367 rnr; 3'-to-5' exoribonuclease RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMD_2958 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:smz03012]
D SMD_2962 infB; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D SMD_2951 infC; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D SMD_3329 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SMD_1337 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SMD_0770 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMD_0783 tuf2; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMD_0782 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D SMD_2125 fusA2; Translation elongation factor G-related protein K02355 fusA; elongation factor G
D SMD_3451 selB; Selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D SMD_0749 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SMD_1334 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D SMD_0721 hemK; Methylase of polypeptide chain release factors K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SMD_0757 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SMD_2108 infA; Translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D SMD_1986 efp2; Translation elongation factor P-related protein K02356 efp; elongation factor P
D SMD_2888 efp; Translation elongation factor P K02356 efp; elongation factor P
D SMD_2720 poxA; Lysyl-tRNA synthetase, class II K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D SMD_2889 Lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D SMD_2008 prfB; Peptide chain release factor 2 programmed frameshift-containing K02836 prfB; peptide chain release factor 2
D SMD_3205 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D SMD_0190 yaeJ; Hypothetical protein YaeJ with similarity to translation release factor K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:smz03110]
D SMD_2106 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D SMD_3336 clpB; ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SMD_0871 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SMD_3661 hslU; ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SMD_1219 hsp90xo; Hsp90xo protein K04079 HSP90A; molecular chaperone HtpG
D SMD_1745 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D SMD_1794 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMD_4160 hscC; Chaperone protein hscC (Hsc62) K04045 hscC; molecular chaperone HscC
D SMD_3090 yegD; Putative heat shock protein YegD K04046 yegD; hypothetical chaperone protein
D SMD_3813 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMD_1795 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SMD_3171 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D SMD_3211 hslO; 33 kDa chaperonin (Heat shock protein 33) (HSP33) K04083 hslO; molecular chaperone Hsp33
D SMD_1793 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SMD_1235 hslR; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 hslR; ribosome-associated heat shock protein Hsp15
D SMD_3814 groES; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SMD_3130 Serine protease precursor MucD/AlgY associated with sigma factor RpoE K04771 degP; serine protease Do [EC:3.4.21.107]
D SMD_1669 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SMD_3704 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SMD_1339 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_1343 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_0125 secB; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D SMD_1187 Copper metallochaperone, bacterial analog of Cox17 protein K09796 pccA; periplasmic copper chaperone A
D SMD_0741 StmPr1; Extracellular protease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D SMD_0579 Protease K14645 K14645; serine protease [EC:3.4.21.-]
D SMD_3618 nahB; Beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SMD_0818 ppiB; Peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SMD_0879 ppiD; Peptidyl-prolyl cis-trans isomerase ppiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SMD_2760 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SMD_1637 fkbP; FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D SMD_3040 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D SMD_0701 surA; Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SMD_2484 Thioredoxin K03671 TXN; thioredoxin
D SMD_2377 Thioredoxin related protein K03671 TXN; thioredoxin
D SMD_3857 trxA; Thioredoxin K03671 TXN; thioredoxin
D SMD_3068 ybbN; Thioredoxin domain-containing protein EC-YbbN K05838 ybbN; putative thioredoxin
D SMD_0854 grxC; Glutaredoxin 3 K03676 grxC; glutaredoxin 3
D SMD_3559 Glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D SMD_1443 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D SMD_3593 dsbA; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SMD_3594 dsbA2; Periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D SMD_0811 dsbB; Periplasmic thiol:disulfide oxidoreductase DsbB,required for DsbA reoxidation K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D SMD_0574 dsbC; Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SMD_2848 ccmG; Cytochrome c-type biogenesis protein CcmG/DsbE,thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D SMD_2580 dsbG; Thiol:disulfide interchange protein DsbG precursor K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:smz04131]
D SMD_1849 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SMD_3400 alf1; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SMD_3406 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMD_1268 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMD_3401 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMD_1219 hsp90xo; Hsp90xo protein K04079 HSP90A; molecular chaperone HtpG
D SMD_1745 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:smz03051]
D SMD_1219 hsp90xo; Hsp90xo protein K04079 HSP90A; molecular chaperone HtpG
D SMD_1745 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:smz03032]
D SMD_0936 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SMD_1595 Site-specific DNA methylase-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMD_0873 hupB; DNA-binding protein HU-alpha K03530 hupB; DNA-binding protein HU-beta
D SMD_2946 himA; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D SMD_1840 ihfB; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D SMD_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SMD_2781 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SMD_0371 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SMD_1108 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMD_1568 Single-stranded DNA-binding protein in PFGI-1-like cluster K03111 ssb; single-strand DNA-binding protein
D SMD_1323 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMD_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMD_0568 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SMD_3064 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMD_0985 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMD_0937 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_4134 dnaQ2; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_0964 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMD_1324 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SMD_4122 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMD_2722 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SMD_1052 DnaA-homolog protein K10763 hda; DnaA-homolog protein
D SMD_2717 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SMD_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SMD_1356 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMD_1648 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMD_3783 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SMD_0066 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SMD_1567 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:smz03036]
D SMD_1528 AAA family ATPase, possible cell division control protein cdc48 K22399 TRIP13; pachytene checkpoint protein 2
D SMD_1595 Site-specific DNA methylase-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMD_3126 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMD_3400 alf1; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SMD_0558 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D SMD_3749 hnsB; histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D SMD_0873 hupB; DNA-binding protein HU-alpha K03530 hupB; DNA-binding protein HU-beta
D SMD_2946 himA; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D SMD_1840 ihfB; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D SMD_3171 cbpA; DnaJ-class molecular chaperone CbpA K05516 cbpA; curved DNA-binding protein
D SMD_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D SMD_3254 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D SMD_3840 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SMD_1673 hfq; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D SMD_1246 Transcriptional regulator lysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SMD_1157 probable LysR-family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D SMD_0482 lrp; Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SMD_0030 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SMD_3597 Transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SMD_2725 smc; Chromosome partition protein smc K03529 smc; chromosome segregation protein
D SMD_2834 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SMD_2835 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SMD_0647 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SMD_1656 ftsB; Cell division protein FtsB K05589 ftsB; cell division protein FtsB
D SMD_3854 ftsE; Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) K09812 ftsE; cell division transport system ATP-binding protein
D SMD_0638 ftsI; Cell division protein FtsI [Peptidoglycan synthetase] K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SMD_2113 ftsK; Cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SMD_0637 ftsL; Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D SMD_0646 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D SMD_0642 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SMD_3853 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMD_0648 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMD_2724 zipA; Cell division protein ZipA K03528 zipA; cell division protein ZipA
D SMD_3465 hypothetical protein K09888 zapA; cell division protein ZapA
D SMD_3464 hypothetical protein K09892 zapB; cell division protein ZapB
D SMD_0213 ATPase K06916 zapE; cell division protein ZapE
D SMD_2901 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SMD_3392 smeM; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_2748 smeG; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3658 smeD; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_1829 smmG; Probable Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_1168 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SMD_1167 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SMD_1166 minE; Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SMD_3646 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SMD_3645 mreC; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SMD_3644 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SMD_3641 rodA; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D SMD_3642 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D SMD_0091 partition protein K03496 parA; chromosome partitioning protein
D SMD_0898 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D SMD_2040 chromosome partioning protein K03496 parA; chromosome partitioning protein
D SMD_4147 parA; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D SMD_0890 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_1502 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_4146 parB; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_1356 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMD_1648 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMD_4020 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SMD_4148 gidB; rRNA small subunit methyltransferase, glucose inhibited division protein GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SMD_3663 xerC; Site-specific tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D SMD_0573 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D SMD_3026 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SMD_3591 engB; GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:smz03400]
D SMD_1288 ogt; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SMD_1760 Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SMD_3851 ung; Uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SMD_2303 DNA-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SMD_1742 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SMD_1387 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SMD_3408 Endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D SMD_0652 mutT; Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMD_2610 mutX; Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMD_4115 Nudix hydrolase family protein PA3470 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMD_0322 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SMD_2914 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D SMD_3710 G:T/U mismatch-specific uracil/thymine DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D SMD_0521 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SMD_1289 DNA methylation and regulatory protein Ada or K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SMD_1019 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SMD_0041 fpg; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SMD_2202 endonuclease K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D SMD_0331 ampN; Exodeoxyribonuclease III protein AmpN K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMD_2306 xthA2; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMD_4151 xthA3; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMD_1267 nfi; Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D SMD_2004 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMD_2722 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SMD_4122 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMD_2193 Excinuclease ABC subunit A paralog of unknown function K03701 uvrA; excinuclease ABC subunit A
D SMD_1190 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SMD_1455 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SMD_1471 uvrC; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SMD_4127 uvrD; ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMD_0778 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMD_0779 rpoC; DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMD_0809 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMD_3444 rpoZ; DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMD_1271 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SMD_1238 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SMD_2900 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SMD_2739 sbcB; Exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D SMD_2905 ex7L; Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SMD_3047 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SMD_1323 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMD_0002 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMD_0568 holC; DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D SMD_3064 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMD_0985 holB; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMD_0937 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_4134 dnaQ2; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SMD_0964 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMD_1108 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMD_1568 Single-stranded DNA-binding protein in PFGI-1-like cluster K03111 ssb; single-strand DNA-binding protein
D SMD_4210 recB; Exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D SMD_4211 recC; Exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D SMD_4209 recD; Exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SMD_1678 recA; RecA protein K03553 recA; recombination protein RecA
D SMD_3317 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SMD_3315 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SMD_3318 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SMD_3793 priA; Helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SMD_1218 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D SMD_0003 recF; DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D SMD_3441 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMD_3124 recO; DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SMD_0966 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D SMD_1791 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SMD_0059 rdgC; DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D SMD_3011 ATPase K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D SMD_0022 ku; Ku domain protein K10979 ku; DNA end-binding protein Ku
D SMD_2199 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D SMD_0023 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D SMD_2717 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SMD_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SMD_3783 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SMD_0066 DNA topoisomerase IB (poxvirus type) K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SMD_0873 hupB; DNA-binding protein HU-alpha K03530 hupB; DNA-binding protein HU-beta
D SMD_3840 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D SMD_2946 himA; Integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D SMD_1840 ihfB; Integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D SMD_3255 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SMD_0558 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D SMD_3749 hnsB; histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS
D SMD_0494 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SMD_1677 lexA; SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D SMD_2561 RecA/RadA recombinase K14160 imuA; protein ImuA
D SMD_2562 DNA polymerase-like protein PA0670 K14161 imuB; protein ImuB
D SMD_2563 dnaE2; DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D SMD_1679 recX; Regulatory protein RecX K03565 recX; regulatory protein
D SMD_0046 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D SMD_2671 DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D SMD_3245 yoaA; DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SMD_4039 dinG; ATP-dependent helicase DinG/Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SMD_3112 Helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D SMD_2487 nrdE; Ribonucleotide reductase of class Ia (aerobic),alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMD_0215 RRM1; Ribonucleotide reductase of class Ia (aerobic),alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMD_2486 nrdF; Ribonucleotide reductase of class Ia (aerobic),beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMD_0216 RRM2; Ribonucleotide reductase of class Ia (aerobic),beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:smz03029]
D SMD_1431 petB; Ubiquinol--cytochrome c reductase, cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D SMD_2962 infB; Translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D SMD_2951 infC; Translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D SMD_1337 tsf; Translation elongation factor Ts K02357 tsf; elongation factor Ts
D SMD_0770 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMD_0783 tuf2; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMD_0782 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D SMD_2125 fusA2; Translation elongation factor G-related protein K02355 fusA; elongation factor G
D SMD_3125 era; GTP-binding protein Era K03595 era; GTPase
D SMD_0336 tyrS; Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMD_3066 leuS; Leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMD_3323 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMD_0318 argS; Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMD_2269 endonuclease precursor K01173 ENDOG; endonuclease G, mitochondrial
D SMD_1108 ssb; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMD_1568 Single-stranded DNA-binding protein in PFGI-1-like cluster K03111 ssb; single-strand DNA-binding protein
D SMD_1329 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D SMD_1794 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMD_1793 grpE; Heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SMD_3813 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMD_3814 groES; Heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D SMD_1795 dnaJ; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SMD_3559 Glutaredoxin-like protein K07390 grxD; monothiol glutaredoxin
D SMD_1443 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D SMD_3026 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SMD_0367 cyoE; Heme O synthase, protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SMD_0361 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D SMD_0366 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SMD_4237 yidC; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMD_0364 Cytochrome oxidase biogenesis protein Surf1,facilitates heme A insertion K14998 SURF1; surfeit locus 1 family protein
D SMD_3007 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D SMD_3975 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone K07152 SCO1; protein SCO1
D SMD_1219 hsp90xo; Hsp90xo protein K04079 HSP90A; molecular chaperone HtpG
D SMD_1745 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:smz02000]
D SMD_1466 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SMD_3374 colicin V secretion ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SMD_1306 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMD_2803 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SMD_1801 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SMD_2853 cydC; Transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SMD_2854 cydD; Transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SMD_1371 macB; Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SMD_2312 Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SMD_2660 macB2; Macrolide export ATP-binding/permease protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D SMD_1826 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D SMD_2433 modA; Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) K02020 modA; molybdate transport system substrate-binding protein
D SMD_2432 modB; Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) K02018 modB; molybdate transport system permease protein
D SMD_2431 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SMD_2251 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SMD_2249 ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SMD_2250 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SMD_3546 Periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SMD_1411 potF; Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) K11073 potF; putrescine transport system substrate-binding protein
D SMD_1414 potI; Putrescine transport system permease protein PotI (TC 3.A.1.11.2) K11074 potI; putrescine transport system permease protein
D SMD_1413 potH; Putrescine transport system permease protein PotH (TC 3.A.1.11.2) K11075 potH; putrescine transport system permease protein
D SMD_1412 potG; Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D SMD_1730 Multiple sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMD_0554 ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SMD_4214 Uncharacterized ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SMD_0556 ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SMD_4213 Uncharacterized ABC transporter, permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SMD_0555 ABC transporter ATP-binding protein USSDB6B K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SMD_4212 Uncharacterized ABC transporter, ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SMD_0553 Membrane lipoprotein lipid attachment site containing protein USSDB6D K18480 linN; cholesterol transport system auxiliary component
D SMD_4215 Uncharacterized ABC transporter, auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D SMD_4216 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D SMD_2828 Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SMD_2827 Sugar ABC transporter, sugar permease protein 1 USSDB1C K02025 ABC.MS.P; multiple sugar transport system permease protein
D SMD_2826 Sugar ABC transporter, sugar permease protein 2 USSDB1D K02026 ABC.MS.P1; multiple sugar transport system permease protein
D SMD_1384 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D SMD_1385 phoX; Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) K02040 pstS; phosphate transport system substrate-binding protein
D SMD_1383 pstC; Phosphate transport system permease protein PstC (TC 3.A.1.7.1) K02037 pstC; phosphate transport system permease protein
D SMD_1382 pstA; Phosphate transport system permease protein PstA (TC 3.A.1.7.1) K02038 pstA; phosphate transport system permease protein
D SMD_1381 pstB; Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMD_3714 Methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D SMD_3673 Methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SMD_3674 Methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SMD_3823 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SMD_1900 Periplasmic binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SMD_1899 ABC-type polar amino acid transport system,ATPase component K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SMD_2121 Heme ABC transporter, cell surface heme and hemoprotein receptor HmuT K25132 hmuT; heme transport system substrate-binding protein
D SMD_2122 Heme ABC transporter, permease protein HmuU K25133 hmuU; heme transport system permease protein
D SMD_2123 Heme ABC transporter, ATPase component HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D SMD_0037 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SMD_0529 wzm; O-antigen export system permease protein RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D SMD_0530 wzt; ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D SMD_0570 Predicted permease K07091 lptF; lipopolysaccharide export system permease protein
D SMD_0571 Predicted Permease K11720 lptG; lipopolysaccharide export system permease protein
D SMD_1035 lptB; Lipopolysaccharide ABC transporter, ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SMD_4057 ABC-type Na efflux pump, permease component K09696 natB; sodium transport system permease protein
D SMD_4058 ABC-type Na transport system, ATPase component K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D SMD_1738 Lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D SMD_1739 Lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SMD_2845 Cytochrome c-type biogenesis protein CcmD,interacts with CcmCE K02196 ccmD; heme exporter protein D
D SMD_2844 ccmC; Cytochrome c-type biogenesis protein CcmC,putative heme lyase for CcmE K02195 ccmC; heme exporter protein C
D SMD_2843 ccmB; ABC transporter involved in cytochrome c biogenesis, CcmB subunit K02194 ccmB; heme exporter protein B
D SMD_2842 ccmA; ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SMD_3853 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMD_3854 ftsE; Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) K09812 ftsE; cell division transport system ATP-binding protein
D SMD_2765 ABC transporter, permease protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMD_1243 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMD_4065 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMD_1242 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMD_1105 membrane protein, putative K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMD_1425 ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMD_2764 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMD_4064 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMD_1106 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMD_1424 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMD_0289 ABC-type antimicrobial peptide transport system,permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_0290 ABC-type antimicrobial peptide transport system,permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_0682 ABC transporter, permease protein, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_1583 Cysteine desulfurase K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_2355 ABC-type antimicrobial peptide transport system,permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_3688 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_3689 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_3737 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_3738 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SMD_0291 Methionine ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMD_1584 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMD_2356 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMD_3687 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMD_3736 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMD_1077 sufC; Iron-sulfur cluster assembly ATPase protein SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SMD_4006 hypothetical protein K08150 SLC2A13; MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13
D SMD_0369 Sodium/bile acid symporter family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SMD_3790 Na-driven multidrug efflux pump K26939 norM; MATE family, multidrug efflux pump
D SMD_1233 Na-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D SMD_1712 xylE2; D-xylose proton-symporter XylE K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D SMD_2238 xylE; D-xylose proton-symporter XylE K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D SMD_1966 Predicted mannose transporter, GGP family K02429 fucP; MFS transporter, FHS family, L-fucose permease
D SMD_0285 dicarboxylate transport protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D SMD_1142 L-Proline/Glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SMD_2380 proP; L-Proline/Glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SMD_2860 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SMD_2755 Probable 3-phenylpropionic acid transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D SMD_0332 ampG; AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D SMD_2469 transporter, putative K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D SMD_3150 bcr; MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SMD_0689 Putative drug efflux protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D SMD_2644 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D SMD_3570 Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SMD_1361 emrB; Inner membrane component of tripartite multidrug resistance system K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D SMD_2351 hypothetical protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D SMD_3731 Permeases of the major facilitator superfamily K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D SMD_1797 Fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D SMD_0196 Permeases of the major facilitator superfamily K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D SMD_1027 ptsI; Phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SMD_1028 ptsH; Phosphocarrier protein, nitrogen regulation associated K02784 ptsH; phosphocarrier protein HPr
D SMD_2225 Phosphoenolpyruvate-protein phosphotransferase of PTS system K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D SMD_2227 fruA; PTS system, fructose-specific IIB component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMD_1029 PTS system, mannose-specific IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D SMD_1032 PTS system nitrogen-specific IIA component,PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D SMD_3135 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin Z
D SMD_3478 Potassium voltage-gated channel subfamily KQT possible potassium channel, VIC family K10716 kch; voltage-gated potassium channel
D SMD_0105 amtB; Ammonium transporter K03320 amt; ammonium transporter, Amt family
D SMD_0824 gst; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_2798 gst4; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_3338 Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_2786 gst3; Glutathione S-transferase, unnamed subgroup K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_1427 gstA; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_1820 gst2; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_4221 Uncharacterized glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_3746 gst5; Glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_3794 Uncharacterized glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D SMD_1433 sspA; Stringent starvation protein A K03599 sspA; stringent starvation protein A
D SMD_3419 TPR domain protein in aerotolerance operon K07114 yfbK; Ca-activated chloride channel homolog
D SMD_3420 batA; BatA (Bacteroides aerotolerance operon) K07114 yfbK; Ca-activated chloride channel homolog
D SMD_3384 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D SMD_3941 kefA; Potassium efflux system KefA protein / Small-conductance mechanosensitive channel K05802 mscK; potassium-dependent mechanosensitive channel
D SMD_2614 Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D SMD_0378 Small-conductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel
D SMD_1026 mgtE; Magnesium transporter K06213 mgtE; magnesium transporter
D SMD_4084 mgtE2; Magnesium transporter K06213 mgtE; magnesium transporter
D SMD_0478 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_2042 motA2; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_0477 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SMD_2041 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SMD_0009 exbB; MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D SMD_1464 Ferric siderophore transport system, biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D SMD_2398 exbB2; MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D SMD_3496 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D SMD_0010 exbD; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D SMD_0011 exbD3; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D SMD_3495 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D SMD_1465 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D SMD_2397 exbD2; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D SMD_3601 exbD4; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D SMD_3602 exbD5; Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D SMD_3313 tolQ; MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D SMD_3312 tolR; Tol biopolymer transport system, TolR protein K03560 tolR; biopolymer transport protein TolR
D SMD_1416 corA; Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D SMD_1623 Protein crcB homolog K06199 crcB; fluoride exporter
D SMD_4045 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein
D SMD_1557 merT; Mercuric transport protein, MerT K08363 merT; mercuric ion transport protein
D SMD_1556 merP; Periplasmic mercury(2) binding protein K08364 merP; periplasmic mercuric ion binding protein
D SMD_1643 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SMD_2248 Phosphate-specific outer membrane porin OprP Pyrophosphate-specific outer membrane porin OprO K07221 oprO_P; phosphate-selective porin OprO and OprP
D SMD_3543 oprP; Phosphate-specific outer membrane porin OprP Pyrophosphate-specific outer membrane porin OprO K07221 oprO_P; phosphate-selective porin OprO and OprP
D SMD_3549 Phosphate-specific outer membrane porin OprP Pyrophosphate-specific outer membrane porin OprO K07221 oprO_P; phosphate-selective porin OprO and OprP
D SMD_0829 Outer membrane protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SMD_0961 OmpA domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SMD_2502 Outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D SMD_0353 fadL; Long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D SMD_0597 mrkC; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D SMD_1342 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D SMD_0759 hypothetical protein K12678 aidA-I; autotransporter family porin
D SMD_0623 putative autotransporter K12678 aidA-I; autotransporter family porin
D SMD_0624 Putative ATP-binding component of a transport system and adhesin protein K12678 aidA-I; autotransporter family porin
D SMD_3562 hypothetical protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SMD_3735 hypothetical protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SMD_3376 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase
D SMD_0947 putative autotransporter protein K19231 bmaC; fibronectin-binding autotransporter adhesin
D SMD_1265 TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins K19611 fepA; ferric enterobactin receptor
D SMD_1070 Ferrichrome-iron receptor K16090 fiu; catecholate siderophore receptor
D SMD_2496 Iron(III) dicitrate transport protein FecA K16091 fecA; Fe(3+) dicitrate transport protein
D SMD_0500 Outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D SMD_3599 fhuE; Putative OMR family iron-siderophore receptor precursor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D SMD_1154 Putative OMR family iron-siderophore receptor precursor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D SMD_1066 bfrA; TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SMD_3723 cirA; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SMD_2480 TonB-dependent receptor Outer membrane receptor for ferrienterochelin and colicins K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SMD_3500 Iron siderophore receptor protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SMD_2572 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SMD_2387 Iron siderophore receptor protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SMD_0679 huvA; outer membrane hemin receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SMD_0159 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0019 Probable tonB-dependent receptor yncD precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0033 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0288 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0515 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0848 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0994 Outer membrane vitamin B12 receptor BtuB K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_2909 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_2320 Ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3393 Outer membrane receptor proteins, mostly Fe transport K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3617 N-acetylglucosamine-regulated TonB-dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_1683 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3552 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_2695 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_1284 Zinc-regulated outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3058 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_2489 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3330 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3343 ferric enterobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3600 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_1892 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_2780 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3508 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3213 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_2654 iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3985 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0764 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_1691 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_2537 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3027 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3028 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_1098 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_1204 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3967 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_3999 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SMD_0147 smmJ; Heavy metal RND efflux outer membrane protein,CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D SMD_2372 smmC; Heavy metal RND efflux outer membrane protein,CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D SMD_4138 smmO; hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system
D SMD_2131 smmD; Heavy metal RND efflux outer membrane protein,CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D SMD_2141 smmJ2; Outer membrane protein, probably efflux family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D SMD_1476 smmD2; Heavy metal RND efflux outer membrane protein,CzcC family K15725 czcC; outer membrane protein, heavy metal efflux system
D SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D SMD_1767 smeX; RND efflux system, outer membrane lipoprotein CmeC K18300 oprN; outer membrane protein, multidrug efflux system
D SMD_3656 smeF; RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SMD_4021 smeC; RND efflux system, outer membrane lipoprotein K18323 smeC; outer membrane protein, multidrug efflux system
D SMD_2228 rpfN; RpfN protein K07267 oprB; porin
D SMD_1329 Outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D SMD_1854 Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) K17713 bamB; outer membrane protein assembly factor BamB
D SMD_3351 comL; Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) K05807 bamD; outer membrane protein assembly factor BamD
D SMD_1787 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex K06186 bamE; outer membrane protein assembly factor BamE
D SMD_4165 Outer membrane protein K07278 tamA; translocation and assembly module TamA
D SMD_4164 putative exported protein K09800 tamB; translocation and assembly module TamB
D SMD_2503 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D SMD_0578 Outer membrane protein K21449 ata; trimeric autotransporter adhesin
D SMD_3015 Phage tail fiber protein K21449 ata; trimeric autotransporter adhesin
D SMD_1036 LptA, protein essential for LPS transport across the periplasm K09774 lptA; lipopolysaccharide export system protein LptA
D SMD_1037 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters K11719 lptC; lipopolysaccharide export system protein LptC
D SMD_0702 ostA; Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D SMD_3065 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) K03643 lptE; LPS-assembly lipoprotein
D SMD_1418 corC; Magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D SMD_1101 Predicted maltose transporter MalT K16211 malY; maltose/moltooligosaccharide transporter
D SMD_0444 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D SMD_3059 arcD; Arginine/ornithine antiporter ArcD K03758 arcD; arginine:ornithine antiporter / lysine permease
D SMD_2578 amino acid permease-associated region K03759 adiC; arginine:agmatine antiporter
D SMD_1266 Cobalt-zinc-cadmium resistance protein CzcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SMD_2821 zupT; Zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D SMD_0143 smmQ2; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K15726 czcA; heavy metal efflux system protein
D SMD_0149 cusA; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K15726 czcA; heavy metal efflux system protein
D SMD_2139 cusA2; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K15726 czcA; heavy metal efflux system protein
D SMD_2370 smmA; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K15726 czcA; heavy metal efflux system protein
D SMD_4140 smmQ; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K15726 czcA; heavy metal efflux system protein
D SMD_2133 cusA3; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07787 cusA; copper/silver efflux system protein
D SMD_3527 smeP; RND efflux transporter K18303 mexK; multidrug efflux pump
D SMD_3657 smeE; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D SMD_2749 acrD; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D SMD_3391 smeN; RND multidrug efflux transporter Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D SMD_1983 smeZ; RND efflux system, inner membrane transporter CmeB K18146 adeB; multidrug efflux pump
D SMD_4022 smeB; RND efflux system, inner membrane transporter K18322 smeB; multidrug efflux pump
D SMD_1765 smeW; RND efflux system, inner membrane transporter CmeB K19585 oqxB; multidrug efflux pump
D SMD_0911 cusA4; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07788 mdtB; multidrug efflux pump
D SMD_3874 smeJ; Acriflavin resistance plasma membrane protein K07788 mdtB; multidrug efflux pump
D SMD_0910 cusA5; Cobalt-zinc-cadmium resistance protein CzcA Cation efflux system protein CusA K07789 mdtC; multidrug efflux pump
D SMD_3875 smeK; Acriflavin resistance plasma membrane protein K07789 mdtC; multidrug efflux pump
D SMD_2935 Ethidium bromide-methyl viologen resistance protein EmrE K03297 emrE; small multidrug resistance pump
D SMD_0946 sugE; Quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D SMD_3898 sugE2; Quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D SMD_2492 mdtI; Spermidine export protein mdtI K11742 mdtI; spermidine export protein MdtI
D SMD_2493 Spermidine export protein mdtJ K11743 mdtJ; spermidine export protein MdtJ
D SMD_2337 Bacterial/Archaeal Transporter family protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D SMD_3596 protein of unknown function DUF6, transmembrane K11939 rhtA; inner membrane transporter RhtA
D SMD_0287 rarD; RarD protein, chloamphenicol sensitive K05786 rarD; chloramphenicol-sensitive protein RarD
D SMD_3227 Protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein
D SMD_2546 lctP; L-lactate permease K00427 lldP; L-lactate permease
D SMD_3513 opuD2; choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter
D SMD_2021 High-affinity choline uptake protein BetT K02168 betT; choline/glycine/proline betaine transport protein
D SMD_2490 betT; High-affinity choline uptake protein BetT K02168 betT; choline/glycine/proline betaine transport protein
D SMD_2137 sodium/calcium exchanger family protein K07301 yrbG; cation:H+ antiporter
D SMD_3920 yrbG; hypothetical protein K07301 yrbG; cation:H+ antiporter
D SMD_3542 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D SMD_0472 Na/H antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D SMD_1857 kefB2; Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D SMD_4086 kefB; Glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D SMD_3331 putative Glutathione-regulated potassium-efflux system protein KefB K26735 KEA4_5_6; K+:H+ antiporter
D SMD_1353 Na()/H() antiporter K26731 CHX; K+:H+ antiporter
D SMD_0604 Xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SMD_3339 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SMD_4189 benE; Benzoate transport protein K05782 benE; benzoate membrane transport protein
D SMD_2497 Chloride channel protein K03281 clcA; chloride channel protein, CIC family
D SMD_4010 chloride channel K03281 clcA; chloride channel protein, CIC family
D SMD_1500 chrA; Chromate transport protein ChrA K07240 chrA; chromate transporter
D SMD_0255 Sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D SMD_2483 Manganese transport protein MntH K03322 mntH; manganese transport protein
D SMD_2247 Na/H antiporter NhaD and related arsenite permeases K03893 arsB; arsenical pump membrane protein
D SMD_0131 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D SMD_1497 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D SMD_3914 phaAB; Na() H() antiporter subunit A Na() H() antiporter subunit B K05559 phaA; multicomponent K+:H+ antiporter subunit A
D SMD_3915 phaC; Na() H() antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D SMD_3916 phaD; Na() H() antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D SMD_3917 phaE; Na() H() antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D SMD_3918 phaF; Na() H() antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D SMD_3919 phaG; Na() H() antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D SMD_1195 murJ; Proposed peptidoglycan lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D SMD_3316 kup; Kup system potassium uptake protein K03549 kup; KUP system potassium uptake protein
D SMD_1247 Transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SMD_1158 Transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SMD_2937 rhtB; Homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D SMD_4224 Threonine efflux protein K11250 leuE; leucine efflux protein
D SMD_2420 Branched-chain amino acid transport protein azlC K26605 azlC; branched chain amino acid efflux pump
D SMD_2421 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D SMD_0400 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D SMD_3075 Putative preQ0 transporter K09125 yhhQ; queuosine precursor transporter
D SMD_3588 nodulin 21-related protein K22736 VIT; vacuolar iron transporter family protein
D SMD_0642 ftsW; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SMD_4157 Integral membrane protein K23242 mntP; manganese efflux pump family protein
D SMD_2143 High-affinity iron permease K07243 FTR; high-affinity iron transporter
D SMD_3138 cstA; Carbon starvation protein A K23676 btsT; pyruvate/proton symporter
D SMD_0008 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_0659 TonB family protein K03832 tonB; periplasmic protein TonB
D SMD_2574 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_2820 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_3057 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_3494 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_3243 TonB protein K03832 tonB; periplasmic protein TonB
D SMD_2679 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_4053 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_2678 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_2396 Ferric siderophore transport system, periplasmic binding protein TonB K03832 tonB; periplasmic protein TonB
D SMD_3309 Outer membrane lipoprotein omp16 precursor K03640 pal; peptidoglycan-associated lipoprotein
D SMD_3311 tolA; TolA protein K03646 tolA; colicin import membrane protein
D SMD_3310 tolB; tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins K03641 tolB; TolB protein
D SMD_2277 hypothetical protein K03641 tolB; TolB protein
D SMD_3493 Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D SMD_1153 Malonate decarboxylase alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D SMD_1152 Malonate decarboxylase delta subunit K13931 mdcC; malonate decarboxylase delta subunit
D SMD_3569 Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D SMD_1360 emrA; Membrane fusion component of tripartite multidrug resistance system K03543 emrA; membrane fusion protein, multidrug efflux system
D SMD_0142 smmP2; Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family K15727 czcB; membrane fusion protein, heavy metal efflux system
D SMD_0148 smmK; Probable Co/Zn/Cd efflux system membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D SMD_2140 cusB2; Probable Co/Zn/Cd efflux system membrane fusion protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D SMD_2371 smmB; hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D SMD_4139 smmP; hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D SMD_2132 cusB; Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family K07798 cusB; membrane fusion protein, copper/silver efflux system
D SMD_3373 hypothetical protein K13408 cvaA; membrane fusion protein
D SMD_3528 smeO; RND efflux membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D SMD_3392 smeM; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_2748 smeG; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3658 smeD; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_1829 smmG; Probable Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_1982 smeY; Membrane fusion protein of RND family multidrug efflux pump K18145 adeA; membrane fusion protein, multidrug efflux system
D SMD_4023 smeA; Membrane fusion protein of RND family multidrug efflux pump K18321 smeA; membrane fusion protein, multidrug efflux system
D SMD_1504 smeV2; RND multidrug efflux membrane fusion protein K19586 oqxA; membrane fusion protein, multidrug efflux system
D SMD_1764 smeV; RND efflux system, membrane fusion protein CmeA K19586 oqxA; membrane fusion protein, multidrug efflux system
D SMD_3873 smeI; membrane fusion protein precursor K07799 mdtA; membrane fusion protein, multidrug efflux system
D SMD_0912 Probable RND efflux membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D SMD_1372 macA; Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D SMD_2313 Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D SMD_2659 macA; Macrolide-specific efflux protein MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D SMD_0158 pnuC; PnuC-like transporter linked to homoserine kinase and OMR K03811 pnuC; nicotinamide mononucleotide transporter
D SMD_0354 pnuC2; Ribosyl nicotinamide transporter, PnuC-like K03811 pnuC; nicotinamide mononucleotide transporter
D SMD_1991 feoA; ferrous iron transport protein K04758 feoA; ferrous iron transport protein A
D SMD_1992 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D SMD_2167 Peripheral-type benzodiazepine receptor K05770 TSPO; translocator protein
D SMD_0277 ecnA; hypothetical protein K16347 ecnA; entericidin A
D SMD_2847 ccmF; Cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D SMD_2547 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D SMD_2332 mgtC; Mg(2) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D SMD_2498 bll7766 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D SMD_1485 copD; Copper resistance protein D K07245 pcoD; copper resistance protein D
D SMD_2365 copD2; Copper resistance protein D K07245 pcoD; copper resistance protein D
D SMD_1486 copC; Copper resistance protein C precursor K07156 copC; copper resistance protein C
D SMD_2364 copC2; Copper resistance protein C precursor K07156 copC; copper resistance protein C
D SMD_1460 MltA-interacting protein precursor K07274 mipA; MipA family protein
D SMD_0916 Putative outer membrane protein CC_0351 precursor K07274 mipA; MipA family protein
D SMD_3334 MltA-interacting MipA K07274 mipA; MipA family protein
C 02044 Secretion system [BR:smz02044]
D SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D SMD_3373 hypothetical protein K13408 cvaA; membrane fusion protein
D SMD_3374 colicin V secretion ABC transporter ATP-binding protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D SMD_2401 gspC; hypothetical protein K02452 gspC; general secretion pathway protein C
D SMD_0590 xpsD; General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) K02453 gspD; general secretion pathway protein D
D SMD_2409 gspD; General secretion pathway protein D K02453 gspD; general secretion pathway protein D
D SMD_0580 xpsE; General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SMD_2408 gspE; General secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SMD_4168 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D SMD_0581 xpsF; General secretion pathway protein F / Type II secretory pathway, component PulF K02455 gspF; general secretion pathway protein F
D SMD_2407 gspF; General secretion pathway protein F K02455 gspF; general secretion pathway protein F
D SMD_0582 xpsG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D SMD_2413 gspG; General secretion pathway protein G K02456 gspG; general secretion pathway protein G
D SMD_0583 xpsH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D SMD_2402 gspH; General secretion pathway protein H K02457 gspH; general secretion pathway protein H
D SMD_0584 xpsI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D SMD_2403 gspI; General secretion pathway protein I K02458 gspI; general secretion pathway protein I
D SMD_0585 xpsJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D SMD_2404 gspJ; General secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D SMD_0586 pefK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D SMD_2412 gspK; General secretion pathway protein K K02460 gspK; general secretion pathway protein K
D SMD_0587 pefL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D SMD_2411 gspL; General secretion pathway protein L K02461 gspL; general secretion pathway protein L
D SMD_0588 xpsM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D SMD_2410 gspM; General secretion pathway protein M K02462 gspM; general secretion pathway protein M
D SMD_0589 xpsN; General secretion pathway protein N K02463 gspN; general secretion pathway protein N
D SMD_3361 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SMD_3359 pilA; Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D SMD_3781 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D SMD_3358 pilB; Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D SMD_3360 pilC; Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D SMD_1452 pilE; Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D SMD_1851 pilF; Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D SMD_3241 pilG; twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D SMD_3170 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3240 pilH2; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3239 pilI; type IV pili signal transduction protein PilI K02659 pilI; twitching motility protein PilI
D SMD_3238 pilJ; pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ
D SMD_3428 pilM; Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D SMD_3427 pilN; Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D SMD_3426 pilO; Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D SMD_3425 pilP; Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D SMD_3424 pilQ; Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D SMD_1013 pilT; Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SMD_0523 Type II secretion system protein-like protein K02670 pilU; twitching motility protein PilU
D SMD_1014 pilU; twitching motility protein K02670 pilU; twitching motility protein PilU
D SMD_1448 pilV; Type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D SMD_1449 pilW; Type IV fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D SMD_1450 pilX; Type IV fimbrial biogenesis protein PilX K02673 pilX; type IV pilus assembly protein PilX
D SMD_1451 pilY1; Type IV fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D SMD_0986 pilZ; Type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D SMD_1447 fimU; Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D SMD_1454 fimT; Type IV fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D SMD_3002 fimV; FimV protein K08086 fimV; pilus assembly protein FimV
D SMD_2506 probable prepilin peptidase transmembrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SMD_0954 SAF domain K02279 cpaB; pilus assembly protein CpaB
D SMD_2508 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D SMD_0953 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D SMD_2509 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D SMD_2510 Probable pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D SMD_0952 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SMD_2511 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SMD_0951 type II secretion system protein K12510 tadB; tight adherence protein B
D SMD_2512 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D SMD_0950 Type II/IV secretion system protein TadC,associated with Flp pilus assembly K12511 tadC; tight adherence protein C
D SMD_2513 type II secretion system protein K12511 tadC; tight adherence protein C
D SMD_2514 Flp pilus assembly protein TadD, contains TPR repeats K27079 tadD; tight adherence protein D
D SMD_2516 hypothetical protein K27080 tadG; tight adherence protein G
D SMD_2505 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D SMD_0960 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SMD_1057 DNA uptake protein and related DNA-binding proteins K02237 comEA; competence protein ComEA
D SMD_1463 Predicted hydrolase of the metallo-beta-lactamase superfamily, clustered with KDO2-Lipid A biosynthesis genes K02238 comEC; competence protein ComEC
D SMD_2049 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SMD_2050 flhB; Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SMD_2064 fliF; Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D SMD_2062 fliH; Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SMD_2061 fliI; Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SMD_2056 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SMD_2055 fliO; Flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SMD_2054 fliP; Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SMD_2053 fliQ; Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SMD_2052 fliR; Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SMD_2635 Bores hole in peptidoglycan layer allowing type IV secretion complex assembly to occur (VirB1) K03194 virB1; type IV secretion system protein VirB1
D SMD_2634 Major pilus subunit of type IV secretion complex (VirB2) K03197 virB2; type IV secretion system protein VirB2
D SMD_2633 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB3) K03198 virB3; type IV secretion system protein VirB3
D SMD_2632 virB4; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB4) K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D SMD_2630 trwI; Integral inner membrane protein of type IV secretion complex (VirB6) K03201 virB6; type IV secretion system protein VirB6
D SMD_2639 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB8) K03203 virB8; type IV secretion system protein VirB8
D SMD_2638 virB9; Forms the bulk of type IV secretion complex that spans outer membrane and periplasm (VirB9) K03204 virB9; type IV secretion system protein VirB9
D SMD_2637 Inner membrane protein forms channel for type IV secretion of T-DNA complex (VirB10) K03195 virB10; type IV secretion system protein VirB10
D SMD_2636 virB11; ATPase provides energy for both assembly of type IV secretion complex and secretion of T-DNA complex (VirB11) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D SMD_0920 virD4; Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SMD_2641 virD4; Type IV secretion system protein VirD4 K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D SMD_1575 Chromosome partitioning ATPase in PFGI-1-like cluster, ParA-like K12055 K12055; chromosome partitioning related protein ParA
D SMD_1505 Pyruvate/2-oxoglutarate dehydrogenase complex,dihydrolipoamide acyltransferase (E2) component, and related enzymes K12070 traI; conjugal transfer pilus assembly protein TraI
D SMD_1535 Type IV secretory pathway, VirD4 components K12071 traD; conjugal transfer pilus assembly protein TraD
D SMD_0574 dsbC; Thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D SMD_0922 trbB; Conjugative transfer protein TrbB K20527 trbB; type IV secretion system protein TrbB [EC:7.4.2.8]
D SMD_0923 trbC; Conjugative transfer protein TrbC K20528 trbC; type IV secretion system protein TrbC
D SMD_0924 trbD; Conjugative transfer protein TrbD K20529 trbD; type IV secretion system protein TrbD
D SMD_0925 trbE; Conjugative transfer protein TrbE K20530 trbE; type IV secretion system protein TrbE [EC:7.4.2.8]
D SMD_0929 trbF; Conjugative transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D SMD_0930 trbG; Conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D SMD_0931 trbI; Conjugative transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D SMD_0926 trbJ; Conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D SMD_0928 trbL; Conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D SMD_0759 hypothetical protein K12678 aidA-I; autotransporter family porin
D SMD_0623 putative autotransporter K12678 aidA-I; autotransporter family porin
D SMD_0624 Putative ATP-binding component of a transport system and adhesin protein K12678 aidA-I; autotransporter family porin
D SMD_3562 hypothetical protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SMD_3735 hypothetical protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D SMD_3376 Phospholipase/lecithinase/hemolysin K12686 apeE; outer membrane lipase/esterase
D SMD_0595 fimA; Fimbrial protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin)
D SMD_1339 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_1343 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_0597 mrkC; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D SMD_1342 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D SMD_1341 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SMD_1344 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SMD_2328 hypothetical protein K21965 ecpB; Mat/Ecp fimbriae periplasmic chaperone
D SMD_2326 CFA/I fimbrial subunit C precursor K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D SMD_3435 cblC; Alpha-fimbriae usher protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein
D SMD_0651 secA; Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMD_0125 secB; Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) K03071 secB; preprotein translocase subunit SecB
D SMD_1811 secD; Protein-export membrane protein SecD (TC 3.A.5.1.1) K03072 secD; preprotein translocase subunit SecD
D SMD_0772 Preprotein translocase subunit SecE (TC 3.A.5.1.1) K03073 secE; preprotein translocase subunit SecE
D SMD_1812 secF; Protein-export membrane protein SecF (TC 3.A.5.1.1) K03074 secF; preprotein translocase subunit SecF
D SMD_2982 secG; Preprotein translocase subunit SecG (TC 3.A.5.1.1) K03075 secG; preprotein translocase subunit SecG
D SMD_0805 secY; Preprotein translocase secY subunit (TC 3.A.5.1.1) K03076 secY; preprotein translocase subunit SecY
D SMD_1223 ffh; Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMD_1743 ftsY; Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) K03110 ftsY; fused signal recognition particle receptor
D SMD_1810 yajC; Preprotein translocase subunit YajC (TC 3.A.5.1.1) K03210 yajC; preprotein translocase subunit YajC
D SMD_4237 yidC; Inner membrane protein translocase component YidC, long form K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMD_4173 tatE; Twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D SMD_4172 tatB; Twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D SMD_4171 tatC; Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:smz02042]
D SMD_2175 Zona occludens toxin K10954 zot; zona occludens toxin
D SMD_1643 Hemolysins and related proteins containing CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SMD_3206 Predicted membrane protein hemolysin III homolog K11068 hlyIII; hemolysin III
D SMD_1690 plcC; Phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:smz02022]
D SMD_0851 phoR; Phosphate regulon sensor protein PhoR (SphS) K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SMD_0852 phoB; Phosphate regulon transcriptional regulatory protein PhoB (SphR) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D SMD_0262 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SMD_0261 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SMD_0914 sensory histidine kinase in two-component regulatory system with OmpR K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D SMD_0913 Two component transcriptional regulator, winged helix family K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D SMD_0510 hypothetical protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D SMD_1275 creC; Two-component response regulator CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D SMD_1274 creB; Two-component response regulator CreB K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D SMD_4024 smeS; Sensory histidine kinase K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D SMD_4025 smeR; Response regulator BaeR K07664 baeR; two-component system, OmpR family, response regulator BaeR
D SMD_1493 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_2367 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_2366 cusR; Copper-sensing two-component system response regulator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SMD_0325 kdpD; Osmosensitive K channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D SMD_0324 kdpE; DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D SMD_3547 Two-component system sensor protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SMD_1259 qseC; sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D SMD_3548 tctD; Tricarboxylate transport transcriptional regulator TctD K07774 tctD; two-component system, OmpR family, response regulator TctD
D SMD_0904 phoB2; two component transcriptional regulator, winged helix family K07671 prrA; two-component system, OmpR family, response regulator PrrA
D SMD_3333 hypothetical protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D SMD_3332 Transcriptional regulatory protein RstA K18073 parR; two-component system, OmpR family, response regulator ParR
D SMD_1980 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_2316 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_1981 Two-component response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D SMD_0903 periplasmic sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SMD_1373 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator
D SMD_1260 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SMD_1139 Transcriptional regulatory protein ompR K02483 K02483; two-component system, OmpR family, response regulator
D SMD_2373 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D SMD_3809 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SMD_3948 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D SMD_1407 sensor kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D SMD_0761 Signal transduction histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SMD_0763 Signal transduction histidine kinase K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D SMD_0166 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_0760 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_2925 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_0320 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_2149 two component transcriptional regulator, LuxR family K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D SMD_1724 BarA-associated response regulator UvrY (= GacA = SirA) K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D SMD_0167 hypothetical protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D SMD_0293 Two-component sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMD_0294 Two-component system regulatory protein K07693 desR; two-component system, NarL family, response regulator DesR
D SMD_3720 Autolysin sensor kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SMD_3719 Autolysis response regulater LytR K08083 algR; two-component system, LytTR family, response regulator AlgR
D SMD_0657 Two-component response regulator K02477 K02477; two-component system, LytTR family, response regulator
D SMD_0112 glnL; Two-component system sensor protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D SMD_0113 glnG; Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D SMD_3356 pilS; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SMD_3357 hydG; Type IV fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D SMD_2093 Histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D SMD_2036 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2043 cheA2; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2045 cheY2; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2037 cheY; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2027 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_1928 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_2089 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D SMD_3237 frzE; Chemotaxis protein cheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SMD_3241 pilG; twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D SMD_3170 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3240 pilH2; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3236 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D SMD_2165 Phytochrome, two-component sensor histidine kinase K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D SMD_1924 two-component system regulatory protein K13589 cpdR; two-component system, cell cycle response regulator CpdR
D SMD_2015 rpfC; Sensory/regulatory protein rpfC K10715 rpfC; two-component system, sensor histidine kinase RpfC [EC:2.7.13.3]
D SMD_2014 rpfG; response regulator K13815 rpfG; two-component system, response regulator RpfG
D SMD_1721 Sensor histidine kinase PrrB (RegB) K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D SMD_1720 Dna binding response regulator PrrA (RegA) K15012 regA; two-component system, response regulator RegA
D SMD_3626 Two-component system response regulator K02485 rssB; two-component system, response regulator
D SMD_1929 two-component hybrid sensor and regulator K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:smz02035]
D SMD_2036 cheA; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2043 cheA2; Signal transduction histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SMD_2033 cheW; Positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_2039 chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_1889 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D SMD_2028 cheD; Chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D SMD_2029 cheR; Chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SMD_1927 chemotaxis protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SMD_2027 cheB; Chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_1928 Protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SMD_2045 cheY2; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2037 cheY; Chemotaxis regulator-transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SMD_2044 cheZ; Chemotaxis response-phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D SMD_2089 cheV; Chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D SMD_4079 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_1240 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3161 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2099 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2595 mcpA; Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2030 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2031 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3725 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_3820 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_4177 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2035 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SMD_2062 fliH; Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D SMD_2061 fliI; Flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SMD_2060 fliJ; Flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D SMD_2055 fliO; Flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D SMD_2054 fliP; Flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SMD_2053 fliQ; Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SMD_2052 fliR; Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SMD_2049 flhA; Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D SMD_2050 flhB; Flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D SMD_2063 fliG; Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D SMD_2057 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SMD_2056 fliN; Flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SMD_2064 fliF; Flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D SMD_2081 flgI; Flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D SMD_2090 flgA; Flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SMD_2082 flgH; Flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D SMD_2058 fliL; Flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D SMD_2065 fliE; Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SMD_2059 fliK; Flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D SMD_2088 flgB; Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D SMD_2087 flgC; Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D SMD_2086 flgD; Flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D SMD_2084 flgF; Flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D SMD_2083 flgG; Flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SMD_2080 flgK; Flagellar protein FlgJ [peptidoglycan hydrolase] K02395 flgJ; peptidoglycan hydrolase FlgJ
D SMD_2085 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SMD_2079 flgL; Flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D SMD_2078 flgJ; Flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SMD_2075 fliC2; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2076 fliC; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2077 fliC3; Flagellar biosynthesis protein FliC K02406 fliC; flagellin
D SMD_2074 fliD; Flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D SMD_2073 fliS; Flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D SMD_2046 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SMD_0478 motA; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_2042 motA2; Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D SMD_0477 motB; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SMD_2041 motB2; Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D SMD_2067 Flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D SMD_2091 flgM; Negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D SMD_2048 flhF; Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D SMD_2047 fleN; Flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D SMD_3241 pilG; twitching motility protein PilG K02657 pilG; twitching motility two-component system response regulator PilG
D SMD_3170 pilH; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3240 pilH2; twitching motility protein PilH K02658 pilH; twitching motility two-component system response regulator PilH
D SMD_3239 pilI; type IV pili signal transduction protein PilI K02659 pilI; twitching motility protein PilI
D SMD_3238 pilJ; pilus biogenesis protein K02660 pilJ; twitching motility protein PilJ
D SMD_3237 frzE; Chemotaxis protein cheA K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D SMD_3357 hydG; Type IV fimbriae expression regulatory protein PilR K02667 pilR; two-component system, NtrC family, response regulator PilR
D SMD_3356 pilS; Two-component sensor PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D SMD_1013 pilT; Twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SMD_0523 Type II secretion system protein-like protein K02670 pilU; twitching motility protein PilU
D SMD_1014 pilU; twitching motility protein K02670 pilU; twitching motility protein PilU
D SMD_3236 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D SMD_3235 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC
D SMD_3359 pilA; Type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D SMD_3781 fimbrial protein K02650 pilA; type IV pilus assembly protein PilA
D SMD_3358 pilB; Type IV fimbrial assembly, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D SMD_3360 pilC; Type IV fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D SMD_3361 Leader peptidase (Prepilin peptidase) K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SMD_1851 pilF; Type IV pilus biogenesis protein PilF K02656 pilF; type IV pilus assembly protein PilF
D SMD_3424 pilQ; Type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D SMD_3425 pilP; Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D SMD_3426 pilO; Type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D SMD_3427 pilN; Type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D SMD_3428 pilM; Type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D SMD_0986 pilZ; Type IV pilus biogenesis protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ
D SMD_1448 pilV; Type IV fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D SMD_1449 pilW; Type IV fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D SMD_1450 pilX; Type IV fimbrial biogenesis protein PilX K02673 pilX; type IV pilus assembly protein PilX
D SMD_1451 pilY1; Type IV fimbrial biogenesis protein PilY1 K02674 pilY1; type IV pilus assembly protein PilY1
D SMD_1452 pilE; Type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D SMD_2505 Flp/Fap pilin component K02651 flp; pilus assembly protein Flp/PilA
D SMD_0960 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D SMD_2506 probable prepilin peptidase transmembrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D SMD_0954 SAF domain K02279 cpaB; pilus assembly protein CpaB
D SMD_2508 Flp pilus assembly protein RcpC/CpaB K02279 cpaB; pilus assembly protein CpaB
D SMD_0953 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D SMD_2509 Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly K02280 cpaC; pilus assembly protein CpaC
D SMD_2510 Probable pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D SMD_0952 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SMD_2511 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D SMD_0595 fimA; Fimbrial protein precursor K07345 fimA; major type 1 subunit fimbrin (pilin)
D SMD_1339 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_1343 Sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein
D SMD_0597 mrkC; outer membrane usher protein precursor K07347 fimD; outer membrane usher protein
D SMD_1342 Sigma-fimbriae usher protein K07347 fimD; outer membrane usher protein
D SMD_1341 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D SMD_1344 Sigma-fimbriae tip adhesin K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins [BR:smz03037]
D SMD_0823 Suppressor of fused K06229 SUFU; suppressor of fused
C 04812 Cytoskeleton proteins [BR:smz04812]
D SMD_3646 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SMD_0648 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMD_0647 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SMD_1168 minC; Septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D SMD_1167 minD; Septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D SMD_1166 minE; Cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D SMD_0091 partition protein K03496 parA; chromosome partitioning protein
D SMD_0898 Chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D SMD_2040 chromosome partioning protein K03496 parA; chromosome partitioning protein
D SMD_4147 parA; Chromosome (plasmid) partitioning protein ParA / Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D SMD_0890 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_1502 putative plasmid stabilization protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMD_4146 parB; Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:smz04147]
D SMD_1219 hsp90xo; Hsp90xo protein K04079 HSP90A; molecular chaperone HtpG
D SMD_1745 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D SMD_3400 alf1; Fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SMD_1655 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMD_3406 gap; NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMD_3403 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMD_3401 pykA; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMD_4229 Dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SMD_3813 groEL; Heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMD_1794 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMD_1719 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMD_4050 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SMD_0308 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SMD_1859 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SMD_0770 tuf; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMD_0783 tuf2; Translation elongation factor Tu K02358 tuf; elongation factor Tu
D SMD_0967 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SMD_0369 Sodium/bile acid symporter family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D SMD_2017 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SMD_0118 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3106 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SMD_3147 Dipeptidyl carboxypeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
D SMD_0664 sahH; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SMD_3489 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SMD_1822 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SMD_2868 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMD_2873 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMD_0528 metC; Cystathionine gamma-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SMD_0017 fbp; Fructose-1,6-bisphosphatase, type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SMD_2427 glgB; 1,4-alpha-glucan (glycogen) branching enzyme,GH-13-type K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SMD_3713 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SMD_0103 glnA; Glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_1410 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMD_4044 hemB; Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SMD_3924 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SMD_2819 moaB3; Pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D SMD_3044 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SMD_1976 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMD_3847 purH; IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMD_2776 odhL; Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_3708 lpdA; Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMD_0542 etfA; Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D SMD_1729 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SMD_2983 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMD_1268 gpmA; Phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMD_2918 blc; Outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
D SMD_2151 Outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
D SMD_3672 outer membrane lipoprotein K03098 APOD; apolipoprotein D and lipocalin family protein
D SMD_3943 blc2; Outer membrane lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:smz02048]
D SMD_1862 hsdR; Type I restriction-modification system,restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SMD_1864 hsdS; Type I restriction-modification system,specificity subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SMD_1863 hsdM; Type I restriction-modification system,DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SMD_1595 Site-specific DNA methylase-like K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D SMD_2023 hypothetical protein K19156 prlF; antitoxin PrlF
D SMD_3179 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D SMD_3415 HigA protein (antitoxin to HigB) K21498 higA-1; antitoxin HigA-1
D SMD_0648 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMD_3646 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SMD_1356 parC; Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMD_1648 parE; Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMD_1279 gltX; Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SMD_1737 hypothetical protein K19168 cptA; toxin CptA
D SMD_1736 YgfY COG2938 K09159 cptB; antitoxin CptB
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:smz04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:smz04052]
D SMD_0225 Nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:smz04090]
D SMD_4050 Dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SMD_0308 hypothetical protein K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SMD_3147 Dipeptidyl carboxypeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1]
C 01504 Antimicrobial resistance genes [BR:smz01504]
D SMD_1909 Aminoglycoside 3'-phosphotransferase K19300 aph3-II; aminoglycoside 3'-phosphotransferase II [EC:2.7.1.95]
D SMD_2105 Streptomycin 3''-kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D SMD_1912 spcN; Spectinomycin phosphotransferase K18844 aph; spectinomycin phosphotransferase
D SMD_2469 transporter, putative K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D SMD_2351 hypothetical protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D SMD_0998 smqnr; quinolone resistance protein K18555 qnr; fluoroquinolone resistance protein
D SMD_3411 Ferric siderophore transport system, periplasmic binding protein TonB K02172 blaR1; bla regulator protein blaR1
D SMD_3412 blaI; Transcriptional repressor, BlaI/MecI family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SMD_3327 L2 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D SMD_3333 hypothetical protein K18072 parS; two-component system, OmpR family, sensor kinase ParS [EC:2.7.13.3]
D SMD_3332 Transcriptional regulatory protein RstA K18073 parR; two-component system, OmpR family, response regulator ParR
D SMD_1493 Heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_2367 hypothetical protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D SMD_2366 cusR; Copper-sensing two-component system response regulator CusR K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D SMD_1174 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMD_0392 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D SMD_3084 lpiA; membrane protein, putative K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SMD_0262 phoQ; Sensor protein PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D SMD_0261 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP
D SMD_3392 smeM; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_2748 smeG; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3658 smeD; Membrane fusion protein of RND family multidrug efflux pump K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_1829 smmG; Probable Co/Zn/Cd efflux system membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D SMD_3657 smeE; RND efflux system, inner membrane transporter K18138 acrB; multidrug efflux pump
D SMD_2749 acrD; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D SMD_3391 smeN; RND multidrug efflux transporter Acriflavin resistance protein K18138 acrB; multidrug efflux pump
D SMD_3656 smeF; RND efflux system, outer membrane lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D SMD_1767 smeX; RND efflux system, outer membrane lipoprotein CmeC K18300 oprN; outer membrane protein, multidrug efflux system
D SMD_3529 Transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SMD_3584 transcriptional regulator, TetR family K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D SMD_3528 smeO; RND efflux membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D SMD_3527 smeP; RND efflux transporter K18303 mexK; multidrug efflux pump
D SMD_2583 zntR; Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D SMD_1980 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_2316 Signal transduction histidine kinase K18143 adeS; two-component system, OmpR family, sensor histidine kinase AdeS [EC:2.7.13.3]
D SMD_1981 Two-component response regulator K18144 adeR; two-component system, OmpR family, response regulator AdeR
D SMD_1982 smeY; Membrane fusion protein of RND family multidrug efflux pump K18145 adeA; membrane fusion protein, multidrug efflux system
D SMD_1983 smeZ; RND efflux system, inner membrane transporter CmeB K18146 adeB; multidrug efflux pump
D SMD_3531 tolC; Type I secretion outer membrane protein, TolC precursor K12340 tolC; outer membrane protein
D SMD_1762 smeRv; LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:smz00537]
D SMD_3044 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SMD_4229 Dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:smz03100]
D SMD_2910 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_2584 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_2588 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_2586 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_0338 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_4181 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_0343 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_4186 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMD_0863 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1920 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1699 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1701 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1700 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_3996 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMD_1453 tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMD_0875 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_0876 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_0878 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_0877 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMD_1590 tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SMD_3894 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMD_0754 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMD_1713 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_2585 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_2589 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_2587 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMD_3375 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_0768 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1473 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1589 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1581 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_1588 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMD_0864 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D SMD_0339 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_0344 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_4185 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_4180 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMD_2593 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1631 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_0868 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1362 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1365 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_1366 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_2981 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMD_3304 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMD_0865 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMD_0866 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMD_3893 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D SMD_3763 tRNA-Ile; tRNA-Ile K14230 tRNA-Met; tRNA Met
D SMD_2965 tRNA-fMet; tRNA-Met K14230 tRNA-Met; tRNA Met
D SMD_2966 tRNA-fMet; tRNA-Met K14230 tRNA-Met; tRNA Met
D SMD_2916 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMD_2917 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMD_2944 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_0862 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_2859 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_2858 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMD_0939 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_0963 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_1682 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_2672 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMD_1210 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMD_0268 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMD_0769 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMD_0771 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SMD_0767 tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMD_0874 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_0987 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_1456 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_1457 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D SMD_3452 tRNA-seC; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D SMD_0337 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_0342 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4182 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4187 16S_rRNA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMD_4179 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0340 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_4184 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0345 23S_rRNA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMD_0341 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_4183 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_4178 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0346 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0347 5S_rRNA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMD_0945 ffs; RNA component of signal recognition particle (Rfam family RF00169) K01983 ffs; SRP RNA
D SMD_0632 rnpB; Ribonuclease P RNA component (Rfam family RF00010) K01978 rnpB; M1 RNA
D SMD_1782 tmRNA; Transfer-messenger RNA (Rfam family RF00023) K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SMD_0316 Oxidoreductase K05886 sdh; serine 3-dehydrogenase (NADP+) [EC:1.1.1.276]
D SMD_2360 Methylglyoxal reductase, acetol producing K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D SMD_4080 Methylglyoxal reductase, acetol producing K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D SMD_0179 3-beta hydroxysteroid dehydrogenase/isomerase family protein in hypothetical gene cluster K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D SMD_1110 Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D SMD_0381 PQQ-dependent oxidoreductase, gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D SMD_2308 F420-dependent glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D SMD_4152 calB; Aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D SMD_0088 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D SMD_0826 fadH; 2,4-dienoyl-CoA reductase [NADPH] K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D SMD_2915 Quinone oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D SMD_0169 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D SMD_0828 Bifunctional protein: zinc-containing alcohol dehydrogenase quinone oxidoreductase (NADPH:quinone reductase) K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SMD_2488 Putative oxidoreductase SMc00968 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SMD_2675 acpD; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SMD_0719 ahpF; Alkyl hydroperoxide reductase protein F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SMD_1692 Cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D SMD_0505 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SMD_0715 msrA2; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SMD_0479 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SMD_0507 msrB2; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SMD_4051 gst6; Glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SMD_2206 Manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6]
D SMD_2519 cpo; non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SMD_2189 Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SMD_0426 Non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SMD_1707 Thiol peroxidase, Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SMD_0720 ahpC; Alkyl hydroperoxide reductase protein C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SMD_1086 osmC; Osmotically inducible protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SMD_0234 ohr; Organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SMD_0156 Aspartate aminotransferase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D SMD_1697 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SMD_2391 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SMD_3137 Pirin K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SMD_0027 cysteine dioxygenase type I K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D SMD_1068 piuC; Iron-uptake factor PiuC K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D SMD_1555 merA; Mercuric ion reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D SMD_2804 fpr; Ferredoxin--NADP() reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SMD_2797 arsC2; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SMD_1498 arsC4; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D SMD_0132 arsC; Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D SMD_1496 arsC3; Arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D SMD_3530 pcm2; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SMD_1662 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SMD_2807 cfa; Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SMD_2152 Cyclopropane-fatty-acyl-phospholipid synthase-like protein, clusters with FIG005069 K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SMD_2155 S-adenosyl-L-methionine dependent methyltransferase, similar to cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D SMD_3321 acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SMD_3259 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SMD_3821 nhoA; N-hydroxyarylamine O-acetyltransferase,putative K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D SMD_1501 Acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D SMD_2622 Acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D SMD_2621 GCN5-related N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D SMD_1635 GCN5-related N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D SMD_2109 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D SMD_0969 Transglutaminase-like enzymes, putative cysteine proteases K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D SMD_1181 ate1; Arginine-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D SMD_0175 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase,KASIII in hypothetical gene cluster K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D SMD_1148 citG; Triphosphoribosyl-dephospho-CoA synthetase K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D SMD_0693 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SMD_1062 apbE; Thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SMD_2612 ATP/GTP-binding protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SMD_0399 glnE; Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D SMD_1264 Putative Heme-regulated two-component response regulator K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D SMD_1149 Phosphoribosyl-dephospho-CoA transferase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D SMD_1821 Selenoprotein O and cysteine-containing homologs K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D SMD_3940 mdoB; Phosphoglycerol transferase I K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D SMD_3862 Isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D SMD_1031 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SMD_3544 Sensor histidine kinase K10819 E2.7.13.3; histidine kinase [EC:2.7.13.3]
D SMD_1258 hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D SMD_2234 Sialic acid-specific 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D SMD_3398 Macro domain, possibly ADP-ribose binding module K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D SMD_3314 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SMD_1189 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SMD_4098 4-hydroxybenzoyl-CoA thioesterase domain protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SMD_0092 sixA; Phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D SMD_0443 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D SMD_2790 yjjV; Putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SMD_4069 tatD; Deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SMD_3266 prophage LambdaSo, lysozyme, putative K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D SMD_2235 aguA; Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D SMD_2256 Beta-lactamase class C and other penicillin binding proteins K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D SMD_0107 ampDII; N-acetyl-anhydromuramyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SMD_1393 ampDI; N-acetyl-anhydromuramyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SMD_3777 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SMD_1960 actP; Lead, cadmium, zinc and mercury transporting ATPase K19597 golT; Au+-exporting ATPase [EC:3.6.1.-]
D SMD_0973 Septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D SMD_0082 ATPase, MoxR family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SMD_0971 MoxR-like ATPases K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SMD_3423 MoxR-like ATPase in aerotolerance operon K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SMD_4032 MoxR-like ATPases K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SMD_1151 Malonate decarboxylase beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D SMD_1150 Malonate decarboxylase gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D SMD_0176 dhaA; Hydrolase, alpha/beta fold family protein, in hypothetical gene cluster K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D SMD_1884 putative 67 kDa myosin-crossreactive streptococcal antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D SMD_2903 YjeF protein, function unknown K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D SMD_1315 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D SMD_1390 Macrophage infectivity potentiator K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D SMD_0178 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase/Peptide synthase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D SMD_3488 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D SMD_3082 rnfB; Ferredoxin II K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D SMD_1565 cadA; Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SMD_2142 Lead, cadmium, zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D SMD_2331 mgtA; Mg(2) transport ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D SMD_1111 hypothetical protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D SMD_2347 fdsC; Formate dehydrogenase chain D K02379 fdhD; FdhD protein
D SMD_1711 4Fe-4S ferredoxin, iron-sulfur binding K05524 fdxA; ferredoxin
D SMD_0543 etfB; Electron transfer flavoprotein, beta subunit K03521 fixA; electron transfer flavoprotein beta subunit
D SMD_3187 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
D SMD_3109 Acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D SMD_3078 Hypothetical protein YaeR with similarity to glyoxylase family K08234 yaeR; glyoxylase I family protein
D SMD_2566 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC K06997 yggS; PLP dependent protein
D SMD_1012 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC K06997 yggS; PLP dependent protein
D SMD_2870 N-acetylglutamate synthase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D SMD_1841 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D SMD_1842 Heat shock (predicted periplasmic) protein YciM,precursor K19804 lapB; lipopolysaccharide assembly protein B
D SMD_1803 hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA
C 99987 Cofactor metabolism
D SMD_0119 Homolog of E. coli HemY protein K02498 hemY; HemY protein
D SMD_0182 ubiB; Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D SMD_1676 Ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D SMD_0181 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D SMD_3958 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D SMD_2783 Putative oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D SMD_0100 ssuE2; NADPH:quinone oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D SMD_0470 putative membrane protein K15977 K15977; putative oxidoreductase
D SMD_1376 DoxX family protein K15977 K15977; putative oxidoreductase
D SMD_1136 DoxX family protein K15977 K15977; putative oxidoreductase
D SMD_2523 Membrane protein 2, distant similarity to thiosulphate:quinone oxidoreductase DoxD K15977 K15977; putative oxidoreductase
D SMD_3184 putative transmembrane DoxX protein K15977 K15977; putative oxidoreductase
D SMD_3750 Inner membrane protein YqjF K15977 K15977; putative oxidoreductase
D SMD_3721 estB; phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
D SMD_4083 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SMD_3116 cspD; Cold shock protein CspD K03704 cspA; cold shock protein
D SMD_2794 cspA2; major cold shock protein K03704 cspA; cold shock protein
D SMD_1819 cspA; Cold shock protein CspA K03704 cspA; cold shock protein
D SMD_2599 tex; Transcription accessory protein (S1 RNA-binding domain) K06959 tex; protein Tex
C 99974 Translation
D SMD_3110 mRNA 3-end processing factor K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D SMD_2104 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D SMD_0869 tig; Cell division trigger factor K03545 tig; trigger factor
D SMD_1132 Inner membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D SMD_3449 fdhE; formate dehydrogenase formation protein FdhE K02380 fdhE; FdhE protein
D SMD_1785 smpB; tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SMD_3965 comM; MG(2) Chelatase family protein / ComM-related protein K07391 comM; magnesium chelatase family protein
D SMD_3623 hypothetical protein K07395 K07395; putative proteasome-type protease
D SMD_2393 OsmC-like protein K07397 yhfA; putative redox protein
D SMD_2818 hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
D SMD_2182 xdhC; xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D SMD_3035 methylated-DNA-protein-cysteine S-methyltransferase related protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D SMD_0319 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SMD_1514 radC2; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SMD_4220 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D SMD_0628 Predicted endonuclease distantly related to archaeal Holliday junction resolvase K07460 yraN; putative endonuclease
D SMD_3799 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D SMD_3779 smf; Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake K04096 smf; DNA processing protein
D SMD_2116 ATPase, AAA family K07478 ycaJ; putative ATPase
D SMD_1602 hypothetical protein K06919 K06919; putative DNA primase/helicase
D SMD_1481 ISStmaD5 transposase A K07483 K07483; transposase
D SMD_0432 ISStmaD4 Transposase K07486 K07486; transposase
D SMD_0438 ISStmaD4 Transposase K07486 K07486; transposase
D SMD_0631 ISStmaD4 Transposase K07486 K07486; transposase
D SMD_1074 hypothetical protein K07491 rayT; REP-associated tyrosine transposase
D SMD_4056 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D SMD_1024 protein of unknown function DUF1568 K07491 rayT; REP-associated tyrosine transposase
D SMD_0139 ISStmaD1 Transposase B K07497 K07497; putative transposase
D SMD_0140 ISStmaD1 Transposase A K07497 K07497; putative transposase
D SMD_0269 ISStmaD1 Transposase B K07497 K07497; putative transposase
D SMD_0270 ISStmaD1 Transposase A K07497 K07497; putative transposase
D SMD_0540 ISStmaD1 Transposase A K07497 K07497; putative transposase
D SMD_3365 ISStmaD1 Transposase A K07497 K07497; putative transposase
D SMD_3366 ISStmaD1 Transposase B K07497 K07497; putative transposase
D SMD_1479 ISStmaD1 Transposase B K07497 K07497; putative transposase
D SMD_1480 ISStmaD1 Transposase A K07497 K07497; putative transposase
D SMD_1779 ISStmaD1 Transposase A K07497 K07497; putative transposase
D SMD_1780 ISStmaD1 Transposase B K07497 K07497; putative transposase
D SMD_3760 ISStmaD1 Transposase B K07497 K07497; putative transposase
D SMD_3761 ISStmaD1 Transposase A K07497 K07497; putative transposase
D SMD_1482 ISStmaD5 transposase B K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SMD_0965 hypothetical protein co-occurring with RecR K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SMD_2231 transport protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D SMD_3155 amino acid transporter K03293 TC.AAT; amino acid transporter, AAT family
D SMD_1973 Amino acid transporters K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SMD_1974 Amino acid transporters K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SMD_4228 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SMD_3532 cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SMD_1830 smmH; Transport protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D SMD_1831 smmI; Transport protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D SMD_3550 citM; Mg/citrate complex transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D SMD_3219 hypothetical protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D SMD_2812 Oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SMD_1160 Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SMD_3928 Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SMD_1645 pitA; Probable low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D SMD_3386 Sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SMD_3389 sodium/alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SMD_0676 Nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D SMD_0350 Membrane-bound metallopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
D SMD_0502 TfoX C-terminal domain superfamily K07343 tfoX; DNA transformation protein and related proteins
D SMD_0596 pili assembly chaperone:Bacterial pili assembly chaperone K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D SMD_3882 transmembrane protein K03807 ampE; AmpE protein
D SMD_0817 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D SMD_2161 hypothetical protein K07167 chrR; putative transcriptional regulator
D SMD_1422 Phosphate starvation-inducible ATPase PhoH with RNA binding motif K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D SMD_1706 Predicted ATPase related to phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
D SMD_3676 UPF0234 protein YajQ K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D SMD_2115 lolA; Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D SMD_0752 Outer membrane lipoprotein LolB precursor K02494 lolB; outer membrane lipoprotein LolB
D SMD_4217 Lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D SMD_2793 Peptidoglycan-associated outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D SMD_1664 nlpD; Lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D SMD_3407 Outer membrane protein W precursor K07275 ompW; outer membrane protein
D SMD_3711 Outer membrane protein W precursor K07275 ompW; outer membrane protein
D SMD_3717 Putative salt-induced outer membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D SMD_0968 Starvation lipoprotein Slp paralog K07285 slp; outer membrane lipoprotein
D SMD_1244 HlyD family secretion protein K01993 ABC-2.TX; HlyD family secretion protein
D SMD_1423 Membrane-fusion protein K01993 ABC-2.TX; HlyD family secretion protein
D SMD_3686 ABC transporter permease K02005 ABC.CD.TX; HlyD family secretion protein
D SMD_0161 putative membrane protein K04062 osmB; osmotically inducible lipoprotein OsmB
D SMD_1276 creD; Inner membrane protein CreD K06143 creD; inner membrane protein
D SMD_2846 ccmE; Cytochrome c-type biogenesis protein CcmE, heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D SMD_2849 ccmH; Cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D SMD_2850 cycH; Cytochrome c heme lyase subunit CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D SMD_1852 Putative DNA-binding protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D SMD_1380 phoU; Phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D SMD_3891 Bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D SMD_0042 mdoD; Glucans biosynthesis protein D precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D SMD_4232 export protein K05794 terC; tellurite resistance protein TerC
D SMD_3816 cutA; Periplasmic divalent cation tolerance protein cutA K03926 cutA; periplasmic divalent cation tolerance protein
D SMD_1958 cutC; Cytoplasmic copper homeostasis protein cutC K06201 cutC; copper homeostasis protein
D SMD_0698 ApaG protein K06195 apaG; ApaG protein
D SMD_1404 Hemerythrin-like protein PA1673 K07216 hr; hemerythrin
D SMD_3258 copB2; Copper resistance protein B K07233 pcoB; copper resistance protein B
D SMD_1490 copB; Copper resistance protein B K07233 pcoB; copper resistance protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SMD_0840 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D SMD_3279 lys; Lytic enzyme K03791 K03791; putative chitinase
D SMD_2627 lytic enzyme K03791 K03791; putative chitinase
D SMD_3628 Osmotically inducible protein OsmY K04065 osmY; hyperosmotically inducible periplasmic protein
D SMD_0075 lhr; ATP-dependent RNA helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D SMD_1629 putative sec-independent protein translocase protein TatC K06886 glbN; hemoglobin
D SMD_0031 Serine protease K07001 K07001; NTE family protein
D SMD_0395 Hydrolase, haloacid delahogenase-like family K07025 K07025; putative hydrolase of the HAD superfamily
D SMD_3884 probable iron binding protein from the HesB_IscA_SufA family K15724 erpA; iron-sulfur cluster insertion protein
D SMD_1078 sufB; Iron-sulfur cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SMD_1076 sufD; Iron-sulfur cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SMD_0627 Putative membrane-bound metal-dependent hydrolases K07038 K07038; inner membrane protein
D SMD_0671 putative YhfP protein K07038 K07038; inner membrane protein
D SMD_0372 Ribonuclease BN K07058 K07058; membrane protein
D SMD_0745 Ribonuclease BN K07058 K07058; membrane protein
D SMD_2878 sufE; Sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D SMD_1639 Rhodanese domain protein UPF0176,Betaproteobacterial subgroup K07146 K07146; UPF0176 protein
D SMD_2100 hypothetical protein K07153 hflD; high frequency lysogenization protein
D SMD_0450 phnB; PhnB protein putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein K04750 phnB; PhnB protein
D SMD_0601 nfrB; bacteriophage N4 adsorption protein B K11740 nfrB; bacteriophage N4 adsorption protein B
D SMD_0134 arsH; Arsenic resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D SMD_0690 lemA; LemA family protein K03744 lemA; LemA protein
D SMD_2758 Protein slyX homolog K03745 slyX; SlyX protein
D SMD_3780 smg; Protein of unknown function Smg K03747 smg; Smg protein
D SMD_4061 cbpD; Chitin binding protein K03933 cpbD; chitin-binding protein
D SMD_3770 Possibly related to ydbT K08981 K08981; putative membrane protein
D SMD_1046 putative integral membrane protein K08984 yjdF; putative membrane protein
D SMD_3218 hypothetical protein K08987 K08987; putative membrane protein
D SMD_4197 hypothetical protein K09858 K09858; SEC-C motif domain protein
D SMD_3089 phnA; Alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D SMD_2532 Ankyrin K06867 K06867; uncharacterized protein
D SMD_4087 ankyrin-like protein K06867 K06867; uncharacterized protein
D SMD_0691 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D SMD_3990 Beta-propeller domains of methanol dehydrogenase type K06872 K06872; uncharacterized protein
D SMD_2205 General stress protein K06884 K06884; uncharacterized protein
D SMD_3730 General stress protein K06884 K06884; uncharacterized protein
D SMD_3288 W; Phage baseplate assembly protein K06903 W; Bacteriophage baseplate protein W
D SMD_3295 D; Gene D protein K06905 D; Bacteriophage probable baseplate hub protein
D SMD_3294 GpU; Phage-related tail protein K06906 gpU; phage tail protein
D SMD_3289 FI; Phage tail sheath monomer K06907 FI; Bacteriophage tail sheath protein
D SMD_3290 FII; Major tail tube protein K06908 FII; Bacteriophage tail tube protein
D SMD_0177 Ferredoxin K06940 K06940; uncharacterized protein
D SMD_2927 Putative ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D SMD_3866 Putative ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D SMD_3113 hypothetical protein K06953 K06953; uncharacterized protein
D SMD_2157 Amine oxidase, flavin-containing K06954 K06954; uncharacterized protein
D SMD_2809 hypothetical protein K06975 K06975; uncharacterized protein
D SMD_1169 hypothetical protein K06977 K06977; uncharacterized protein
D SMD_2550 Glutaryl-7-ACA acylase K06978 K06978; uncharacterized protein
D SMD_0431 hypothetical protein K06983 K06983; uncharacterized protein
D SMD_2284 bacteriocin resistance protein, putative K06992 K06992; uncharacterized protein
D SMD_0155 Glyoxalase family protein K06996 K06996; uncharacterized protein
D SMD_3001 Glyoxalase family protein K06996 K06996; uncharacterized protein
D SMD_3822 Glyoxalase family protein K06996 K06996; uncharacterized protein
D SMD_0210 Nuclease K07004 K07004; uncharacterized protein
D SMD_2985 Choline-sulfatase K07014 K07014; uncharacterized protein
D SMD_2119 iroE; IroE protein K07017 K07017; uncharacterized protein
D SMD_3263 iroE2; IroE protein K07017 K07017; uncharacterized protein
D SMD_3264 putative esterase K07017 K07017; uncharacterized protein
D SMD_0212 Alpha/beta hydrolase K07018 K07018; uncharacterized protein
D SMD_0097 hypothetical protein K07019 K07019; uncharacterized protein
D SMD_0451 Glyoxalase family protein K07032 K07032; uncharacterized protein
D SMD_4026 hypothetical protein K07074 K07074; uncharacterized protein
D SMD_0859 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D SMD_1364 membrane protein, putative K07090 K07090; uncharacterized protein
D SMD_4198 hypothetical protein K07090 K07090; uncharacterized protein
D SMD_3901 Sulfate transporter, CysZ-type K07090 K07090; uncharacterized protein
D SMD_1131 putative phosphoesterase K07098 K07098; uncharacterized protein
D SMD_1932 Probable transmembrane protein K07112 K07112; uncharacterized protein
D SMD_1933 GENE II AND X PROTEINS K07112 K07112; uncharacterized protein
D SMD_1080 Proteins containing SET domain K07117 K07117; uncharacterized protein
D SMD_0496 Rrf2-linked NADH-flavin reductase K07118 K07118; uncharacterized protein
D SMD_0629 LppC putative lipoprotein K07121 K07121; uncharacterized protein
D SMD_2192 Short-chain dehydrogenases of various substrate specificities K07124 K07124; uncharacterized protein
D SMD_1069 FOG: TPR repeat, SEL1 subfamily K07126 K07126; uncharacterized protein
D SMD_1351 hypothetical protein K07126 K07126; uncharacterized protein
D SMD_2928 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D SMD_3865 Roadblock/LC7 K07131 K07131; uncharacterized protein
D SMD_3039 Transport protein K07148 K07148; uncharacterized protein
D SMD_1911 hypothetical protein K07148 K07148; uncharacterized protein
D SMD_3487 Uncharacterized protein, similar to the N-terminal domain of Lon protease K07157 K07157; uncharacterized protein
D SMD_2881 yidD; Protein YidD K08998 K08998; uncharacterized protein
D SMD_3470 hypothetical protein K09005 K09005; uncharacterized protein
D SMD_0373 Transamidase GatB domain protein K09117 K09117; uncharacterized protein
D SMD_3636 Proposed lipoate regulatory protein YbeD K09158 K09158; uncharacterized protein
D SMD_2899 hypothetical protein K09164 K09164; uncharacterized protein
D SMD_3769 hypothetical protein K09167 K09167; uncharacterized protein
D SMD_2156 Hypothetical protein K09701 K09701; uncharacterized protein
D SMD_1818 protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D SMD_2833 yciL; YciL protein K09780 K09780; uncharacterized protein
D SMD_3938 Membrane protein, putative K09781 K09781; uncharacterized protein
D SMD_3497 Similar to hypothetical protein DUF454 K09790 K09790; uncharacterized protein
D SMD_3667 protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D SMD_2795 probable membrane protein NMA1128 K09793 K09793; uncharacterized protein
D SMD_1786 UPF0125 protein yfjF K09801 K09801; uncharacterized protein
D SMD_3056 Protein of unknown function DUF541 K09807 K09807; uncharacterized protein
D SMD_3906 hypothetical protein K09807 K09807; uncharacterized protein
D SMD_3463 Putative conserved exported protein precursor K09895 K09895; uncharacterized protein
D SMD_4088 ycgL; Protein YcgL K09902 K09902; uncharacterized protein
D SMD_3099 nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D SMD_0052 mviM; Virulence factor mviM K09915 K09915; uncharacterized protein
D SMD_2110 hypothetical protein K09919 K09919; uncharacterized protein
D SMD_2611 hypothetical protein K09920 K09920; uncharacterized protein
D SMD_3664 Protein of unknown function DUF484 K09921 K09921; uncharacterized protein
D SMD_0189 hypothetical protein K09924 K09924; uncharacterized protein
D SMD_2729 hypothetical protein K09925 K09925; uncharacterized protein
D SMD_2318 Putative cytoplasmic protein K09927 K09927; uncharacterized protein
D SMD_1377 hypothetical protein K09929 K09929; uncharacterized protein
D SMD_1133 hypothetical protein K09929 K09929; uncharacterized protein
D SMD_1378 hypothetical protein K09930 K09930; uncharacterized protein
D SMD_1134 hypothetical protein K09930 K09930; uncharacterized protein
D SMD_3166 Putative inner membrane protein YjeT (clustered with HflC) K09937 K09937; uncharacterized protein
D SMD_1050 hypothetical protein K09938 K09938; uncharacterized protein
D SMD_1065 putative membrane protein K09939 K09939; uncharacterized protein
D SMD_3049 hypothetical protein K09940 K09940; uncharacterized protein
D SMD_3677 hypothetical protein K09941 K09941; uncharacterized protein
D SMD_2353 Lipoprotein, putative K09950 K09950; uncharacterized protein
D SMD_2354 lipoprotein, putative K09950 K09950; uncharacterized protein
D SMD_2187 hypothetical protein K09958 K09958; uncharacterized protein
D SMD_2609 hypothetical protein K09965 K09965; uncharacterized protein
D SMD_2898 hypothetical protein K09973 K09973; uncharacterized protein
D SMD_0696 hypothetical protein K09974 K09974; uncharacterized protein
D SMD_1060 Conserved hypothetical protein (perhaps related to histidine degradation) K09975 K09975; uncharacterized protein
D SMD_3260 hypothetical protein K09981 K09981; uncharacterized protein
D SMD_0074 hypothetical protein K07502 yprB; uncharacterized protein
D SMD_1644 hypothetical protein K07220 K07220; uncharacterized protein
D SMD_0405 DUF1022 domain-containing protein K07276 K07276; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024