+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Streptococcus pneumoniae 670-6B (serotype 6B)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D SP670_1028 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C SP670_1350 era; GTP-binding protein Era K03595 era; GTPase C SP670_1260 Spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C SP670_0616 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA C SP670_0506 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB C SP670_2087 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D SP670_0352 RNA pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D SP670_0739 ribosomal small subunit pseudouridine synthase A, putative K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D SP670_2062 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D SP670_1827 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D SP670_1485 methyltransferase small domain superfamily K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D SP670_2048 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D SP670_1859 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D SP670_0990 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D SP670_0403 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D SP670_1383 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D SP670_1072 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D SP670_2243 rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D SP670_0839 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D SP670_2382 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D SP670_0918 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D SP670_1558 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D SP670_1072 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D SP670_1293 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D SP670_1948 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D SP670_1240 ribosomal large subunit pseudouridine synthase, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SP670_1391 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SP670_2090 ribosomal large subunit pseudouridine synthase, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D SP670_1166 rRNA adenine N-6-methyltransferase K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184] B ribosomal protein modification factors C SP670_0210 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C SP670_1548 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM C SP670_1860 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C SP670_1028 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C SP670_0270 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C SP670_0655 ribonuclease III family protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C SP670_1669 cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C SP670_1564 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C SP670_1350 era; GTP-binding protein Era K03595 era; GTPase C SP670_2061 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C SP670_1802 engA; GTP-binding protein EngA K03977 engA; GTPase C SP670_1260 Spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-] C SP670_1116 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A C SP670_0731 hflX; GTP-binding proten HflX K03665 hflX; GTPase C SP670_1842 GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C SP670_1299 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C SP670_1731 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C SP670_0620 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C SP670_0615 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP C SP670_2370 S4 domain protein YaaA, putative K14761 rlbA; ribosome-associated protein C SP670_1837 putative iojap protein K09710 ybeB; ribosome-associated protein C SP670_1352 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor C SP670_1841 conserved hypothetical protein K07574 yhbY; RNA-binding protein C SP670_2353 ribosome-associated factor Y K05808 hpf; ribosome hibernation promoting factor C SP670_0027 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C SP670_0995 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024