+D GENES KO
#
KEGG Orthology (KO) - Streptococcus cristatus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:soi00010]
D I872_03055 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I872_09600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I872_08015 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I872_02720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I872_09155 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I872_09145 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D I872_05550 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I872_02875 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I872_06890 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I872_04535 acetoin dehydrogenase, E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I872_04530 acetoin dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I872_04525 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_04835 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D I872_00255 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D I872_00215 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D I872_04700 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I872_02360 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D I872_07295 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D I872_07245 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D I872_09295 glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D I872_10355 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:soi00020]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_07295 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D I872_04535 acetoin dehydrogenase, E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I872_04530 acetoin dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I872_04525 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:soi00030]
D I872_09600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I872_05870 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I872_02960 3-carboxymuconate cyclase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D I872_07795 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I872_09200 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D I872_06210 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D I872_02490 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D I872_03545 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D I872_02495 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D I872_04700 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I872_04745 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I872_00090 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I872_02360 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D I872_08015 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:soi00040]
D I872_09555 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I872_09200 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D I872_09785 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
C 00051 Fructose and mannose metabolism [PATH:soi00051]
D I872_08395 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I872_02390 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I872_05250 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D I872_08015 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I872_02720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I872_05245 PTS system fructose specific transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D I872_00205 phosphotransferase system sugar-specific EII component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D I872_08480 PTS system mannost-specific transporter subunits IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D I872_08485 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_00195 PTS system transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_08490 PTS system mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D I872_00200 PTS system, IID component K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:soi00052]
D I872_00215 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D I872_04025 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I872_04030 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D I872_04035 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I872_09555 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I872_04700 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I872_03055 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I872_08150 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D I872_00185 beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D I872_06840 tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I872_06835 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D I872_06845 galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D I872_06850 galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D I872_08405 beta-fructofuranosidase/sucrose 6 phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D I872_00210 agaS; tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:soi00500]
D I872_08400 PTS system transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D I872_08405 beta-fructofuranosidase/sucrose 6 phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D I872_09555 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I872_07245 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D I872_09295 glycosyl hydrolase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D I872_10355 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D I872_02370 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D I872_02375 glycogen biosynthesis protein,glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D I872_02380 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D I872_02365 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D I872_10020 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D I872_02040 pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D I872_10055 Type II secretory pathway, pullulanase PulA glycosidase K01200 pulA; pullulanase [EC:3.2.1.41]
D I872_03470 cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D I872_03415 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D I872_10025 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D I872_06100 PTS system glucose/maltose-specific transporter subunit IIBCA K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D I872_06095 hypothetical protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D I872_04700 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I872_03055 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I872_09600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I872_08395 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:soi00520]
D I872_09340 glycosyl hydrolase family 20 protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D I872_06590 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D I872_07155 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D I872_08395 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I872_01350 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I872_06715 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D I872_06300 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D I872_01965 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I872_03040 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I872_03590 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I872_00290 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D I872_00325 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D I872_09780 nucleotide sugar dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D I872_03055 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I872_04700 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I872_09555 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I872_04025 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I872_04030 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D I872_04035 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I872_00205 phosphotransferase system sugar-specific EII component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D I872_08480 PTS system mannost-specific transporter subunits IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D I872_08485 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_00195 PTS system transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_08490 PTS system mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D I872_00200 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D I872_09600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I872_02390 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I872_02370 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D I872_02375 glycogen biosynthesis protein,glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:soi00620]
D I872_04535 acetoin dehydrogenase, E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I872_04530 acetoin dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I872_04525 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_08820 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D I872_00255 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D I872_09715 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D I872_04720 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D I872_06890 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I872_08880 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D I872_08900 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I872_08890 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D I872_08885 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D I872_07820 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D I872_01055 pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D I872_04835 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D I872_01365 glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D I872_04155 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D I872_02805 Zn-dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D I872_06910 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D I872_07295 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_04235 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:soi00630]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_09615 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D I872_09130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I872_03310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_02860 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:soi00640]
D I872_09715 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D I872_04720 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_08820 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D I872_08880 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D I872_08900 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I872_08890 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D I872_08885 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D I872_04835 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:soi00650]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_04630 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I872_04620 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D I872_04615 CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D I872_04610 CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D I872_00255 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D I872_08820 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D I872_08840 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D I872_08595 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I872_08590 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I872_02415 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:soi00660]
D I872_08595 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I872_08590 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I872_02415 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D I872_04250 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D I872_04260 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D I872_04240 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:soi00562]
D I872_04055 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D I872_02720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:soi00190]
D I872_03015 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D I872_03025 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D I872_03020 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D I872_03010 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D I872_03030 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D I872_03000 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D I872_03005 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D I872_02995 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D I872_05925 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:soi00680]
D I872_03310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I872_02875 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I872_06910 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D I872_08015 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I872_09715 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
D I872_04720 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D I872_05550 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I872_06250 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I872_06255 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I872_02855 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:soi00910]
D I872_07835 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I872_09130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I872_07180 amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D I872_09420 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:soi00920]
D I872_01690 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D I872_01480 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D I872_06065 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D I872_05370 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D I872_05885 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:soi00061]
D I872_08880 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D I872_08900 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I872_08890 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D I872_08885 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D I872_08925 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D I872_00110 acyl carrier protein K02078 acpP; acyl carrier protein
D I872_08915 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I872_08930 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I872_08905 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I872_08910 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I872_08105 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I872_08895 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D I872_07580 putative oxidoreductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D I872_08920 enoyl-acyl carrier protein(ACP) reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D I872_08940 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:soi00071]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_04635 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I872_00255 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:soi00561]
D I872_02860 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I872_03445 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I872_00105 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D I872_02640 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D I872_06815 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I872_02035 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I872_06765 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D I872_06770 glycosyl transferase family protein K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D I872_02045 phosphoglycerol transferase alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:soi00564]
D I872_09550 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D I872_03450 alpha-glycerophosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D I872_02640 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D I872_06815 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I872_02035 lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I872_06130 membrane-anchored glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D I872_06195 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D I872_00960 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D I872_00965 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D I872_10625 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D I872_09880 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:soi00600]
D I872_08150 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D I872_09340 glycosyl hydrolase family 20 protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:soi00230]
D I872_06295 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D I872_02495 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D I872_04700 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I872_04745 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I872_00090 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I872_09110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D I872_00120 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D I872_09100 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D I872_09115 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D I872_09105 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D I872_00130 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D I872_00125 phosphoribosylaminoimidazole carboxylase,catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D I872_09125 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D I872_00175 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D I872_09090 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I872_05375 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D I872_02500 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I872_02510 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I872_00060 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D I872_10590 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I872_07530 deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D I872_03270 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D I872_04470 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I872_03265 guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D I872_08080 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D I872_02335 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I872_02320 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D I872_09870 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D I872_00935 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D I872_04735 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D I872_06235 guanosine 3',5'-bis-pyrophosphate (ppGpp) synthetase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D I872_09620 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D I872_00590 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D I872_07180 amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:soi00240]
D I872_03755 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D I872_02630 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D I872_02600 dihydroorotate dehydrogenase 1B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D I872_02595 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D I872_07830 dihydroorotate dehydrogenase 1A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D I872_02610 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D I872_02605 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D I872_02260 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D I872_10360 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D I872_01930 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D I872_00475 phosphoribulokinase / Uridine kinase family K00876 udk; uridine kinase [EC:2.7.1.48]
D I872_04180 uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D I872_05150 HAD superfamily hydrolase K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D I872_05675 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D I872_03745 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I872_03540 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D I872_03550 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D I872_09870 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D I872_02335 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I872_02320 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D I872_01950 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D I872_06275 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D I872_09440 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D I872_03290 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D I872_03065 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:soi00250]
D I872_08460 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D I872_02125 aspartate aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D I872_08995 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D I872_07085 alanine dehydrogenase 1 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D I872_09620 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D I872_00175 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D I872_03755 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D I872_07835 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I872_09130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I872_01350 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I872_09110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:soi00260]
D I872_08945 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I872_04660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I872_03580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I872_03585 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D I872_00345 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D I872_03310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I872_02860 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I872_05550 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I872_06250 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I872_06255 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I872_02855 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_00960 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D I872_10650 L-serine dehydratase, iron-sulfur-dependent subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D I872_10655 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D I872_08580 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I872_00145 amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D I872_07425 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D I872_07430 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D I872_07460 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:soi00270]
D I872_01480 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D I872_06065 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D I872_05880 L-cysteine desulfhydrase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I872_03095 mmuM; homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D I872_01140 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D I872_01960 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D I872_06285 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D I872_05565 chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D I872_03325 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D I872_07785 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D I872_08945 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I872_04660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I872_03580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I872_05370 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D I872_05885 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D I872_01810 O-acetylhomoserine (thiol)-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D I872_02665 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I872_09625 bifunctional glutamate--cysteine ligase/glutathione synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D I872_04835 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D I872_00145 amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D I872_10650 L-serine dehydratase, iron-sulfur-dependent subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D I872_10655 L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D I872_06250 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I872_06255 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:soi00280]
D I872_02665 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_08840 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:soi00290]
D I872_08580 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I872_04250 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D I872_04260 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D I872_04240 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D I872_08595 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I872_08590 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I872_08585 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D I872_10290 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D I872_02665 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I872_08995 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D I872_04235 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:soi00300]
D I872_03580 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I872_08945 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I872_04660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I872_04655 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D I872_05225 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D I872_09575 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D I872_08360 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D I872_07545 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D I872_00095 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D I872_09570 aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D I872_02220 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:soi00310]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_04635 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_00145 amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D I872_04615 CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D I872_04610 CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00220 Arginine biosynthesis [PATH:soi00220]
D I872_07185 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D I872_07190 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D I872_09130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I872_07835 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I872_07180 amino acid kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D I872_08995 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D I872_01390 GNAT family acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
C 00330 Arginine and proline metabolism [PATH:soi00330]
D I872_03640 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D I872_03630 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D I872_03635 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:soi00340]
D I872_02410 hypothetical protein K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D I872_01160 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D I872_01195 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D I872_01200 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D I872_01155 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D I872_01190 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
C 00350 Tyrosine metabolism
D I872_00255 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism
D I872_04630 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
C 00380 Tryptophan metabolism [PATH:soi00380]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_04635 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:soi00400]
D I872_01625 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D I872_01630 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D I872_02065 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D I872_02055 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D I872_03345 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D I872_03340 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D I872_02070 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D I872_07455 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D I872_07450 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D I872_07445 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D I872_07435 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D I872_07440 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D I872_07425 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D I872_07430 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D I872_07460 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D I872_01705 hypothetical protein K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D I872_02075 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D I872_03350 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:soi00430]
D I872_07085 alanine dehydrogenase 1 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D I872_04720 eutD; phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D I872_09715 acetate kinase A/propionate kinase 2 K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:soi00450]
D I872_05885 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D I872_05880 L-cysteine desulfhydrase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I872_01140 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D I872_08525 class-V aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D I872_06315 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D I872_08230 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:soi00460]
D I872_08460 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D I872_03310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:soi00470]
D I872_01640 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I872_02215 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I872_10410 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D I872_10400 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D I872_00145 amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D I872_07535 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D I872_07365 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I872_07545 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:soi00480]
D I872_09625 bifunctional glutamate--cysteine ligase/glutathione synthetase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D I872_04135 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I872_06960 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D I872_07795 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I872_05870 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:soi00511]
D I872_08150 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D I872_09340 glycosyl hydrolase family 20 protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D I872_09350 glycosyl hydrolase, family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D I872_00460 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D I872_09370 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:soi00542]
D I872_08540 RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:soi00541]
D I872_09555 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D I872_04035 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I872_05305 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I872_05295 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I872_05300 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I872_01825 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D I872_02390 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I872_06300 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D I872_09825 protein Cps9E K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:soi00550]
D I872_01965 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I872_03040 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I872_03590 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I872_06030 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D I872_07365 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I872_02215 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I872_02220 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D I872_07070 diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D I872_06200 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D I872_08550 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I872_07690 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I872_06340 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I872_07360 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I872_06645 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I872_09705 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D I872_08510 penicillin-binding protein 3 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D I872_07840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_05980 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_05895 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D I872_06730 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D I872_06735 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D I872_02755 MurM protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D I872_02750 hypothetical protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D I872_00700 membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D I872_02205 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D I872_06345 penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:soi00552]
D I872_08550 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I872_07690 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I872_08540 RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I872_07235 glycosyl transferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D I872_10410 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D I872_10400 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D I872_10405 hypothetical protein K03739 dltB; membrane protein involved in D-alanine export
D I872_10395 D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D I872_03355 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D I872_06515 LytR family transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D I872_09845 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D I872_02045 phosphoglycerol transferase alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D I872_06765 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D I872_09825 protein Cps9E K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D I872_09795 LPS biosynthesis protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:soi00543]
D I872_08540 RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I872_01480 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:soi00730]
D I872_04750 pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_04900 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_04895 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D I872_09205 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D I872_09195 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D I872_00590 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:soi00740]
D I872_06540 hypothetical protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D I872_04040 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D I872_06295 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:soi00750]
D I872_08755 phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D I872_06255 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I872_00345 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:soi00760]
D I872_01650 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D I872_02500 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I872_02510 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I872_01405 ATPase/kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D I872_06420 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D I872_01655 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D I872_02520 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D I872_04730 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:soi00770]
D I872_08595 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I872_08590 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I872_08585 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D I872_10290 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D I872_03530 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D I872_04685 phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D I872_04690 phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D I872_07485 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D I872_07040 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D I872_01635 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D I872_02665 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:soi00780]
D I872_08905 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I872_08910 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I872_08105 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I872_08895 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D I872_04015 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:soi00785]
D I872_04515 lipoate protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_04535 acetoin dehydrogenase, E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I872_04530 acetoin dehydrogenase K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I872_04525 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:soi00790]
D I872_00740 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D I872_01805 dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D I872_00745 bifunctional folate synthesis protein K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D I872_00730 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D I872_03075 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D I872_00735 dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D I872_09890 dihydrofolate:folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D I872_01090 anthranilate/para-aminobenzoate synthases component I/chorismate binding enzyme K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00670 One carbon pool by folate [PATH:soi00670]
D I872_03075 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D I872_04680 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D I872_01175 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D I872_07650 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D I872_03310 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I872_09100 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D I872_09090 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I872_01190 glutamate formiminotransferase K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D I872_08065 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D I872_03065 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D I872_01145 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D I872_09565 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:soi00860]
D I872_05085 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:soi00900]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_08840 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D I872_08835 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D I872_09055 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D I872_09045 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D I872_09050 diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D I872_09040 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D I872_05610 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D I872_06200 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D I872_06210 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:soi00523]
D I872_05305 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I872_05295 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I872_05300 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I872_01825 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D I872_05295 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:soi00311]
D I872_00285 acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D I872_07215 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:soi00332]
D I872_03630 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D I872_03635 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:soi00261]
D I872_08945 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I872_04660 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I872_04655 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D I872_05225 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:soi00521]
D I872_03055 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D I872_04700 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I872_04055 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D I872_05305 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I872_05295 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I872_05300 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I872_01825 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D I872_03055 glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:soi00525]
D I872_05305 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I872_05295 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D I872_02075 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D I872_07455 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D I872_07450 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D I872_08915 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I872_08910 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I872_08105 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D I872_08925 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D I872_00110 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D I872_01960 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:soi00362]
D I872_03285 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D I872_04635 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I872_04630 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:soi00627]
D I872_07820 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D I872_04615 CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D I872_04610 CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:soi00625]
D I872_00255 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D I872_03285 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D I872_03285 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:soi00626]
D I872_00255 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:soi03020]
D I872_00705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I872_00710 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I872_00615 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I872_08075 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D I872_01515 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:soi03010]
D I872_02675 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D I872_09685 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D I872_00515 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D I872_10505 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D I872_00570 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D I872_09035 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D I872_09165 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D I872_00555 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D I872_08705 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D I872_00480 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D I872_00610 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D I872_09170 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D I872_00605 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D I872_00550 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D I872_01345 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D I872_05145 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D I872_00530 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D I872_09025 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D I872_00505 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D I872_03525 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D I872_03985 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D I872_05935 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D I872_00500 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D I872_00485 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D I872_00490 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D I872_00545 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D I872_00560 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D I872_03120 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D I872_10545 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D I872_03110 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D I872_05940 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D I872_08710 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D I872_00535 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D I872_00580 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D I872_00520 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D I872_00620 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D I872_00565 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D I872_01720 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D I872_01945 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D I872_04885 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D I872_00510 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D I872_00495 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D I872_00540 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D I872_04875 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D I872_08645 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D I872_00525 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D I872_00575 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D I872_01685 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D I872_10300 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D I872_07030 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I872_09700 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I872_10305 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I872_09250 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D I872_01940 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D I872_00600 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D I872_r10800 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10804 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10802 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10806 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10812 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10814 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10810 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10808 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10792 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10794 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10798 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10796 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:soi00970]
D I872_t10692 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10718 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10772 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10714 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10756 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10744 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10752 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10716 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I872_t10786 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I872_t10768 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D I872_t10784 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D I872_t10750 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I872_t10740 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I872_t10700 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I872_t10788 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I872_t10726 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I872_t10760 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10696 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10708 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10722 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10738 tRNA-His K14226 tRNA-His; tRNA His
D I872_t10698 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I872_t10724 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I872_t10710 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I872_t10742 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10758 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10776 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10764 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10766 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I872_t10782 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I872_t10704 tRNA-Met K14230 tRNA-Met; tRNA Met
D I872_t10730 tRNA-Met K14230 tRNA-Met; tRNA Met
D I872_t10706 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I872_t10732 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I872_t10754 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I872_t10702 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10728 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10712 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10746 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10778 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I872_t10762 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I872_t10774 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I872_t10736 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D I872_t10748 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I872_t10734 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I872_t10694 tRNA-Val K14237 tRNA-Val; tRNA Val
D I872_t10770 tRNA-Val K14237 tRNA-Val; tRNA Val
D I872_t10720 tRNA-Val K14237 tRNA-Val; tRNA Val
D I872_09280 gltX; glutamyl-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D I872_08970 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D I872_08965 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D I872_08975 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D I872_07115 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I872_08980 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_10065 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_02135 asnC; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D I872_08475 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D I872_08470 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D I872_06750 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I872_08500 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I872_01495 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I872_08230 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I872_08065 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D I872_07555 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I872_09670 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I872_07315 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I872_06940 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D I872_10000 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I872_06185 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I872_10280 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I872_02435 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I872_02445 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I872_00695 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I872_10585 tryptophanyl-tRNA ligase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:soi03060]
D I872_00585 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_07275 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_09695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I872_07025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I872_06205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I872_09265 membrane protein (preprotein translocase) oxaA 1 K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_07825 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_01620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_07255 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_04485 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I872_05680 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D I872_03260 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D I872_03255 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D I872_06745 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I872_08805 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I872_05195 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:soi04122]
D I872_04750 pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_04900 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_10565 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D I872_04895 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:soi03018]
D I872_02875 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I872_01475 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D I872_07020 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D I872_06880 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I872_07780 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D I872_01285 metallo-beta-lactamase superfamily hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I872_09290 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I872_01260 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D I872_09525 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:soi03030]
D I872_06900 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I872_06165 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D I872_03330 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I872_06270 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I872_07225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I872_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I872_10540 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D I872_04000 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D I872_09030 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_00815 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_04585 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D I872_08800 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D I872_00430 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I872_02030 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:soi03410]
D I872_06005 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D I872_02620 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D I872_04715 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D I872_07045 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D I872_09955 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D I872_06385 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D I872_00430 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I872_05380 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I872_02030 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:soi03420]
D I872_00035 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D I872_09005 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D I872_02180 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D I872_05080 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D I872_01800 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I872_00430 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I872_02030 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:soi03430]
D I872_09990 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D I872_01560 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D I872_09975 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D I872_01800 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I872_05620 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D I872_05615 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D I872_05380 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I872_09030 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_00815 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_06900 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I872_06165 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D I872_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I872_03330 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I872_07225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I872_06270 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I872_02030 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:soi03440]
D I872_05380 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I872_09030 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_00815 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_10595 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D I872_00100 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D I872_02210 recR; recombination protein RecR K06187 recR; recombination protein RecR
D I872_09930 recA; recombinase A K03553 recA; recombination protein RecA
D I872_00430 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I872_09960 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D I872_00225 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D I872_01645 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D I872_08810 helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D I872_06900 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I872_06165 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D I872_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I872_03330 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I872_07225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I872_06270 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I872_08070 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:soi03250]
D I872_05975 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:soi02010]
D I872_03610 spermidine/putrescine ABC transporter spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D I872_03605 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D I872_03600 spermidine/putrescine ABC transporter transmembrane protein K11071 potB; spermidine/putrescine transport system permease protein
D I872_03595 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D I872_04285 choline ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D I872_04280 glycine betaine/L-proline ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D I872_00295 sugar ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D I872_09305 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D I872_10030 maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D I872_10035 maltodextrin ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D I872_10040 maltodextrin ABC transporter membrane-spanning protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D I872_09325 ABC sugar transporter solute binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D I872_09335 ABC sugar transporter permease protein K17319 lplB; putative aldouronate transport system permease protein
D I872_09330 ABC sugar transporter membrane spanning permease K17320 lplC; putative aldouronate transport system permease protein
D I872_03555 lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D I872_03565 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D I872_03570 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D I872_03560 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D I872_04065 phosphate transport protein K02040 pstS; phosphate transport system substrate-binding protein
D I872_04070 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D I872_04075 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D I872_04080 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D I872_04085 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D I872_02170 arginine/histidine ABC transporter permease K10036 glnH; glutamine transport system substrate-binding protein
D I872_02165 glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D I872_08370 L-cystine ABC transporter substrate-binding component K02424 tcyA; L-cystine transport system substrate-binding protein
D I872_06330 arginine/histidine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D I872_06325 polar amino acid ABC transporter ATPase K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D I872_08560 amino acid ABC transporter substrate-binding protein K17073 lysX1; putative lysine transport system substrate-binding protein
D I872_08565 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D I872_05660 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I872_05655 ABC transporter membrane-spanning permease-branched chain amino acid transport K01997 livH; branched-chain amino acid transport system permease protein
D I872_05650 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D I872_05645 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I872_05640 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I872_08365 lipoprotein transporter K02073 metQ; D-methionine transport system substrate-binding protein
D I872_08350 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D I872_08355 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D I872_04850 peptide ABC transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_08505 peptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06125 oligopeptide ABC transporter oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06120 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D I872_06115 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D I872_06110 oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D I872_06105 oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D I872_05100 metal binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D I872_00645 Zn-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D I872_00640 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D I872_00635 zinc ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D I872_09645 metal ABC transporter substrate-binding lipoprotein K19971 psaA; manganese/zinc transport system substrate-binding protein
D I872_09650 ABC transporter membrane-spanning permease - manganese transport K19972 psaC; manganese/zinc transport system permease protein
D I872_09655 manganese transport protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D I872_06975 biotin synthase K03523 bioY; biotin transport system substrate-specific component
D I872_10640 cobalt transport protein cbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D I872_08245 cobalt ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein
D I872_10630 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D I872_10635 cbiO; cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D I872_08180 multidrig ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D I872_08185 multidrig ABC transporter ATPase K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D I872_08135 peptide ABC transporter permease K19084 braE; bacitracin transport system permease protein
D I872_08190 antibiotic ABC transporter permease K19084 braE; bacitracin transport system permease protein
D I872_08140 peptide ABC transporter ATPase K19083 braD; bacitracin transport system ATP-binding protein
D I872_08195 antibiotic ABC transporter ATPase K19083 braD; bacitracin transport system ATP-binding protein
D I872_02795 cell division protein K09811 ftsX; cell division transport system permease protein
D I872_02790 cell-division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I872_03710 ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_03715 multidrig ABC transporter ATPase/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_09545 ABC transporter ATP-binding protein/permease K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_09540 ATP-binding permease K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_02145 multidrug ABC transporter permease/ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_03125 permease ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_03130 ABC transporter permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_02150 multidrug ABC transporter permease/ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_08790 peptide transport ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
C 02060 Phosphotransferase system (PTS) [PATH:soi02060]
D I872_02350 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D I872_02345 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D I872_06100 PTS system glucose/maltose-specific transporter subunit IIBCA K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D I872_08400 PTS system transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D I872_00205 phosphotransferase system sugar-specific EII component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D I872_08480 PTS system mannost-specific transporter subunits IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D I872_08485 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_00195 PTS system transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_08490 PTS system mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D I872_00200 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D I872_06870 PTS system enzyme IIBC component (galactitol/fructose specific) K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D I872_06865 PTS system transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D I872_06860 PTS system galactitol-specific family transporter subunit IIC K20114 gatC; galactose PTS system EIIC component
D I872_05245 PTS system fructose specific transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D I872_05250 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:soi03070]
D I872_09695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I872_07025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I872_00585 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_07275 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_06205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I872_09265 membrane protein (preprotein translocase) oxaA 1 K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_07825 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_01620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_07255 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_05680 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D I872_04485 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I872_03260 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D I872_03255 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D I872_03915 TraG protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:soi02020]
D I872_04065 phosphate transport protein K02040 pstS; phosphate transport system substrate-binding protein
D I872_10675 DegP protein K04771 degP; serine protease Do [EC:3.4.21.107]
D I872_05730 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D I872_05735 two-component response transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D I872_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D I872_06230 two-component response transcriptional regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D I872_03165 histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D I872_03160 two-component response transcriptional regulator K10682 saeR; two-component system, OmpR family, response regulator SaeR
D I872_08135 peptide ABC transporter permease K19084 braE; bacitracin transport system permease protein
D I872_08190 antibiotic ABC transporter permease K19084 braE; bacitracin transport system permease protein
D I872_08140 peptide ABC transporter ATPase K19083 braD; bacitracin transport system ATP-binding protein
D I872_08195 antibiotic ABC transporter ATPase K19083 braD; bacitracin transport system ATP-binding protein
D I872_08205 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D I872_08210 two-component response transcriptional regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D I872_10410 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D I872_10405 hypothetical protein K03739 dltB; membrane protein involved in D-alanine export
D I872_10400 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D I872_10395 D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D I872_04150 sensor protein ciaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D I872_04145 two-component response transcriptional regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D I872_07840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_05980 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_02990 two component system histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3]
D I872_02985 two-component response transcriptional regulator K18987 irr; two-component system, OmpR family, response regulator Irr
D I872_00770 sensor protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D I872_00765 DNA response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D I872_05520 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D I872_05525 response regulator of the competence regulon K07707 agrA; two-component system, LytTR family, response regulator AgrA
D I872_08790 peptide transport ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D I872_08785 competence factor transport protein ComB K12293 comB; competence factor transport accessory protein ComB
D I872_10665 signal transduction protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D I872_10660 two-component system LytR/AlgR family transcriptional regulator K12295 comE; two-component system, LytTR family, response regulator ComE
D I872_00070 competence specific sigma factor ComR1 K12296 comX1_2; competence protein ComX
D I872_01520 competence specific sigma factor ComR1 K12296 comX1_2; competence protein ComX
D I872_00050 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D I872_08605 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D I872_08600 two-component response transcriptional regulator K07693 desR; two-component system, NarL family, response regulator DesR
D I872_06085 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D I872_06080 two-component response transcriptional regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D I872_09130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I872_04615 CoA-transferase subunit A K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D I872_04610 CoA-transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_03195 two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D I872_09315 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D I872_09310 response regulator K07720 yesN; two-component system, response regulator YesN
D I872_03190 two-component response transcriptional regulator K07720 yesN; two-component system, response regulator YesN
D I872_00240 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:soi02024]
D I872_07785 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D I872_07455 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D I872_07450 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D I872_01625 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D I872_01630 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D I872_05660 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I872_05655 ABC transporter membrane-spanning permease-branched chain amino acid transport K01997 livH; branched-chain amino acid transport system permease protein
D I872_05650 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D I872_05645 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I872_05640 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I872_05520 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D I872_05525 response regulator of the competence regulon K07707 agrA; two-component system, LytTR family, response regulator AgrA
D I872_08790 peptide transport ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D I872_08785 competence factor transport protein ComB K12293 comB; competence factor transport accessory protein ComB
D I872_10665 signal transduction protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D I872_10660 two-component system LytR/AlgR family transcriptional regulator K12295 comE; two-component system, LytTR family, response regulator ComE
D I872_05515 putative immunity protein K20341 blpL; immunity protein
D I872_04150 sensor protein ciaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D I872_04145 two-component response transcriptional regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D I872_04850 peptide ABC transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_08505 peptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06125 oligopeptide ABC transporter oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06120 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D I872_06115 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D I872_06110 oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D I872_06105 oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D I872_00260 transcriptional regulator PlcR K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D I872_08295 transcription activator plcR K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D I872_00070 competence specific sigma factor ComR1 K12296 comX1_2; competence protein ComX
D I872_01520 competence specific sigma factor ComR1 K12296 comX1_2; competence protein ComX
D I872_02700 transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D I872_07595 putative transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D I872_06835 tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D I872_09265 membrane protein (preprotein translocase) oxaA 1 K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_07825 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_09695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I872_07025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I872_00585 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_07275 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_06205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I872_01620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_07255 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_05680 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D I872_04485 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I872_00770 sensor protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D I872_00765 DNA response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:soi02040]
D I872_08370 L-cystine ABC transporter substrate-binding component K02424 tcyA; L-cystine transport system substrate-binding protein
D I872_04005 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D I872_02875 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:soi01501]
D I872_00050 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D I872_04850 peptide ABC transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_08505 peptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06125 oligopeptide ABC transporter oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06120 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D I872_06115 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D I872_06110 oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D I872_06105 oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D I872_03805 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I872_07215 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D I872_06645 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I872_00700 membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D I872_09705 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D I872_02205 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D I872_06345 penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:soi01502]
D I872_02215 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I872_01640 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I872_02220 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D I872_06340 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I872_07360 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I872_07840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_05980 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:soi01503]
D I872_06310 N-acetylmuramidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D I872_10675 DegP protein K04771 degP; serine protease Do [EC:3.4.21.107]
D I872_05975 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I872_10410 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D I872_10405 hypothetical protein K03739 dltB; membrane protein involved in D-alanine export
D I872_10400 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D I872_10395 D-alanine transfer protein K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:soi01000]
C 01001 Protein kinases [BR:soi01001]
D I872_08050 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I872_09830 putative autophosphorylating protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D I872_05730 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D I872_03165 histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D I872_08205 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D I872_04150 sensor protein ciaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D I872_02990 two component system histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3]
D I872_00770 sensor protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D I872_08605 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D I872_06085 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D I872_05520 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D I872_10665 signal transduction protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D I872_03195 two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D I872_09315 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:soi01009]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I872_08055 phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D I872_02855 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:soi01002]
D I872_05195 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D I872_01660 aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D I872_04470 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I872_04765 glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D I872_09450 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D I872_08790 peptide transport ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D I872_00085 secreted antigen GbpB/SagA; peptidoglycan hydrolase; PcsB protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D I872_00115 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D I872_09110 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D I872_01350 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I872_02825 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D I872_04825 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D I872_06995 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D I872_02175 hypothetical protein K07052 K07052; CAAX protease family protein
D I872_05260 hypothetical protein K07052 K07052; CAAX protease family protein
D I872_09950 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D I872_08315 abortive infection protein K07052 K07052; CAAX protease family protein
D I872_04135 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I872_07135 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D I872_09660 Zinc metalloproteinase in scaA 5'region K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D I872_07840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_05980 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_04925 dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D I872_08360 acetylornithine deacetylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D I872_03695 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D I872_09570 aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D I872_01980 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D I872_05740 proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D I872_08450 X-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D I872_06160 aminopeptidase PepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D I872_00065 membrane ATPase FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D I872_00795 glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D I872_03460 hypothetical protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D I872_06365 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D I872_06190 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D I872_10675 DegP protein K04771 degP; serine protease Do [EC:3.4.21.107]
D I872_08510 penicillin-binding protein 3 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D I872_05670 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D I872_09075 x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D I872_03475 LPXTG cell wall surface protein, X-prolyl dipeptidylaminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D I872_07480 hypothetical protein K07177 K07177; Lon-like protease
D I872_06745 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I872_08805 Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I872_03820 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D I872_10440 microcin C7 resistance protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D I872_06990 putative peptidase, peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:soi01003]
D I872_06765 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D I872_06770 glycosyl transferase family protein K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D I872_02380 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D I872_06645 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I872_00700 membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D I872_09705 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D I872_07235 glycosyl transferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D I872_08540 RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:soi01005]
D I872_01885 polysaccharide biosynthesis protein/rhamnosyltransferase K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D I872_01900 lipopolysaccharide biosynthesis protein K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D I872_08540 RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I872_01815 glycosyl transferase family protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:soi01011]
D I872_01965 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I872_03040 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I872_03590 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I872_06030 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D I872_07365 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I872_05895 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D I872_02215 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I872_02755 MurM protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D I872_02750 hypothetical protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D I872_01640 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I872_07535 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D I872_10440 microcin C7 resistance protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D I872_06340 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I872_07360 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I872_08550 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I872_07690 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I872_06645 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I872_00700 membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D I872_09705 penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D I872_02205 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D I872_06345 penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
D I872_08510 penicillin-binding protein 3 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D I872_07840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_05980 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_00085 secreted antigen GbpB/SagA; peptidoglycan hydrolase; PcsB protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D I872_00115 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D I872_04825 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D I872_06015 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D I872_06310 N-acetylmuramidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:soi01004]
D I872_08915 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I872_08930 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I872_08905 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I872_08910 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I872_08105 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I872_08895 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D I872_07580 putative oxidoreductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D I872_08920 enoyl-acyl carrier protein(ACP) reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D I872_08940 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D I872_00105 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D I872_02640 glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D I872_06815 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:soi01008]
C 01006 Prenyltransferases [BR:soi01006]
D I872_05610 farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D I872_06200 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D I872_05485 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:soi01007]
D I872_09280 gltX; glutamyl-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D I872_00695 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I872_10585 tryptophanyl-tRNA ligase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I872_01495 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I872_10000 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I872_08230 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I872_07315 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I872_07555 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I872_09670 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I872_06940 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D I872_08980 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_10065 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_02135 asnC; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D I872_10280 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I872_08475 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D I872_08470 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D I872_08500 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I872_06185 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I872_06750 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I872_07115 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I872_02435 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I872_02445 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I872_08995 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D I872_00095 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D I872_05880 L-cysteine desulfhydrase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I872_02665 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I872_01090 anthranilate/para-aminobenzoate synthases component I/chorismate binding enzyme K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D I872_06255 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:soi00194]
D I872_03030 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D I872_03025 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D I872_03020 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D I872_03015 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D I872_03010 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D I872_03005 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D I872_02995 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D I872_03000 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:soi03000]
D I872_05170 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D I872_06875 lactose specific PTS system transcriptional repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D I872_05255 fructose operon transcriptional repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D I872_04020 LacI family transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D I872_10050 maltose operon transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D I872_06905 catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D I872_08410 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D I872_04475 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D I872_01015 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility
D I872_04270 SlyA-like protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D I872_09135 transcription regulator (glutamine synthetase repressor) K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D I872_05555 ferric transport regulator protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D I872_07195 catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D I872_07205 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D I872_10420 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D I872_01020 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D I872_03805 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I872_04015 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D I872_01405 ATPase/kinase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D I872_04355 DNA-binding helix-turn-helix protein K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D I872_00260 transcriptional regulator PlcR K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D I872_08295 transcription activator plcR K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D I872_02700 transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D I872_07595 putative transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D I872_01135 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D I872_09180 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D I872_04760 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D I872_08990 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D I872_09240 DNA-binding protein K07727 K07727; putative transcriptional regulator
D I872_07105 transcriptional regulator K07729 K07729; putative transcriptional regulator
D I872_08330 DNA-binding protein K07729 K07729; putative transcriptional regulator
D I872_00775 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D I872_10365 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D I872_06690 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D I872_10680 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I872_07165 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D I872_09995 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D I872_05600 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism
D I872_01250 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D I872_01375 transcriptional repressor CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D I872_05830 hypothetical protein K03973 pspC; phage shock protein C
D I872_05960 hypothetical protein K03973 pspC; phage shock protein C
D I872_07100 hypothetical protein K03973 pspC; phage shock protein C
D I872_03745 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I872_08865 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D I872_00070 competence specific sigma factor ComR1 K12296 comX1_2; competence protein ComX
D I872_01520 competence specific sigma factor ComR1 K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:soi03021]
D I872_00615 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I872_00705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I872_00710 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I872_01515 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D I872_08075 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D I872_04005 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D I872_08040 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D I872_08435 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D I872_09690 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D I872_06010 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:soi03019]
D I872_05715 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I872_01285 metallo-beta-lactamase superfamily hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I872_09290 metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D I872_07780 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D I872_07020 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D I872_09185 CMP-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D I872_06880 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I872_06335 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D I872_02875 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I872_01475 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D I872_06895 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I872_01260 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D I872_09525 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I872_03775 glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:soi03011]
D I872_02675 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D I872_09685 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D I872_00515 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D I872_10505 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D I872_00570 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D I872_09035 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D I872_09165 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D I872_00555 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D I872_08705 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D I872_00480 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D I872_00610 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D I872_09170 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D I872_00605 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D I872_00550 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D I872_01345 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D I872_05145 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D I872_00530 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D I872_09025 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D I872_00505 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D I872_03525 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D I872_03985 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D I872_05935 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D I872_00500 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D I872_00485 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D I872_00490 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D I872_00545 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D I872_00560 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D I872_10545 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D I872_03110 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D I872_05940 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D I872_03120 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D I872_08710 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D I872_00535 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D I872_00580 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D I872_00520 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D I872_00620 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D I872_00565 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D I872_01720 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D I872_01945 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D I872_04885 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D I872_00510 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D I872_00495 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D I872_00540 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D I872_04875 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D I872_08645 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D I872_00525 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D I872_00575 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D I872_01685 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D I872_10300 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D I872_07030 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I872_09700 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I872_10305 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D I872_09250 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D I872_01940 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D I872_00600 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D I872_r10792 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10794 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10798 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10796 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10800 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10804 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10802 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10806 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10812 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10814 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10810 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10808 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:soi03009]
D I872_05715 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I872_07065 era; GTPase Era K03595 era; GTPase
D I872_06705 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D I872_08040 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D I872_08435 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D I872_09690 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D I872_07380 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D I872_06140 16S rRNA uridine-516 pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D I872_09210 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D I872_08060 16S rRNA methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D I872_03535 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D I872_07490 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D I872_09455 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D I872_06380 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D I872_06355 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D I872_06260 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D I872_05605 rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D I872_00680 23S_rRNA m1G745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D I872_08725 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D I872_10670 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D I872_02050 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D I872_07470 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D I872_03360 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D I872_07500 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D I872_04725 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D I872_05190 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D I872_09710 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D I872_07900 erythromycin resistance protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D I872_01300 ribosomal protein alanine acetyl transferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D I872_08115 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D I872_08685 hypothetical protein K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D I872_05110 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D I872_09460 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D I872_09905 holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D I872_01500 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D I872_06880 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I872_06335 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D I872_09205 GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D I872_08845 GTP-binding protein Der K03977 engA; GTPase
D I872_04590 rbgA; GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D I872_05480 GTP-binding protein HflX K03665 hflX; GTPase
D I872_06430 GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D I872_03305 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D I872_00935 GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D I872_08020 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D I872_08045 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP
D I872_10605 hypothetical protein K14761 rlbA; ribosome-associated protein
D I872_06405 hypothetical protein K09710 ybeB; ribosome-associated protein
D I872_07075 metal-binding heat shock protein K07042 ybeY; probable rRNA maturation factor
D I872_06425 hypothetical protein K07574 yhbY; RNA-binding protein
D I872_06045 30S ribosomal interface protein S30EA K05808 hpf; ribosome hibernation promoting factor
D I872_00025 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D I872_08085 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:soi03016]
D I872_05470 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D I872_05220 tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D I872_06185 prolyl-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I872_07315 ileS; isoleucyl-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I872_09670 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I872_08230 methionyl-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I872_10000 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I872_06940 lysS; lysyl-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D I872_08980 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_10065 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_07115 alaS; alanyl-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I872_02135 asnC; asparaginyl-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D I872_06750 thrS; threonyl-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I872_08500 seryl-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I872_01495 cysS; cysteinyl-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I872_07555 valS; valyl-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I872_10280 hisS; histidyl-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I872_02435 pheS; phenylalanyl-tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I872_02445 pheT; phenylalanyl-tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I872_00695 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I872_10585 tryptophanyl-tRNA ligase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I872_00940 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D I872_01575 diadenosine tetraphosphate (Ap4A) hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I872_01595 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D I872_08760 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D I872_03675 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D I872_04750 pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_04900 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_03305 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D I872_05485 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D I872_02480 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D I872_10555 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D I872_09270 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D I872_08475 glyQ; glycyl-tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D I872_08470 glyS; glycyl-tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D I872_09280 gltX; glutamyl-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D I872_06930 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D I872_04915 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D I872_09605 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D I872_05695 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D I872_01425 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D I872_04555 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D I872_05105 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D I872_05330 bcl-2 family protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D I872_07705 rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D I872_07815 SpoU rRNA methylase family protein K03437 spoU; RNA methyltransferase, TrmH family
D I872_10565 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D I872_07160 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D I872_01615 (Fe-S)-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D I872_00470 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D I872_04895 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D I872_00055 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D I872_01295 glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D I872_01305 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D I872_06525 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D I872_06395 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D I872_07020 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D I872_01475 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:soi03012]
D I872_08025 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D I872_01935 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D I872_02690 ABC transporter ATPase K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D I872_09680 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D I872_06785 elongation factor Tu K02358 tuf; elongation factor Tu
D I872_09160 elongation factor G K02355 fusA; elongation factor G
D I872_03295 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D I872_02265 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D I872_03300 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D I872_00030 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D I872_00595 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D I872_08445 elongation factor P K02356 efp; elongation factor P
D I872_02785 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D I872_02240 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:soi03110]
D I872_07660 ATP dependent protease K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D I872_01355 ATP-dependent protease, ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D I872_03080 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D I872_01260 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D I872_09525 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I872_01265 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I872_01430 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D I872_01255 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D I872_09530 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D I872_10675 DegP protein K04771 degP; serine protease Do [EC:3.4.21.107]
D I872_00065 membrane ATPase FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D I872_03000 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D I872_09340 glycosyl hydrolase family 20 protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D I872_05975 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I872_06075 cyclophilin type peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D I872_07125 prsA; foldase protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D I872_01565 thioredoxin K03671 TXN; thioredoxin
D I872_01440 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:soi04131]
D I872_07800 flotillin family protein K07192 FLOT; flotillin
D I872_09350 glycosyl hydrolase, family 38 K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D I872_09155 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I872_05550 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I872_06890 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:soi03032]
D I872_05575 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I872_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D I872_10540 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D I872_02910 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D I872_04000 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D I872_08860 replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D I872_08855 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D I872_09030 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_00815 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_06900 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I872_06165 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D I872_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I872_07225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I872_06270 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I872_03330 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I872_04585 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D I872_08800 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D I872_00430 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I872_02030 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D I872_04830 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I872_02835 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I872_02660 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D I872_02645 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D I872_04570 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:soi03036]
D I872_05715 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I872_07800 flotillin family protein K07192 FLOT; flotillin
D I872_05575 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I872_00005 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D I872_07415 non-heme iron-containing ferritin K04047 dps; starvation-inducible DNA-binding protein
D I872_05710 chromosome partition protein K03529 smc; chromosome segregation protein
D I872_07510 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D I872_07505 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D I872_07350 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D I872_00045 cell division protein DivIC K13052 divIC; cell division protein DivIC
D I872_02790 cell-division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I872_00925 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D I872_05955 DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D I872_06350 cell division protein K03586 ftsL; cell division protein FtsL
D I872_07355 cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D I872_06915 cell division protein K03588 ftsW; cell division protein FtsW
D I872_02795 cell division protein K09811 ftsX; cell division transport system permease protein
D I872_07345 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I872_06310 N-acetylmuramidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D I872_02840 septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D I872_07320 cell division protein DivIVA K04074 divIVA; cell division initiation protein
D I872_07335 hypothetical protein K09772 sepF; cell division inhibitor SepF
D I872_00075 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D I872_00080 cell-shape determining protein MreD K03571 mreD; rod shape-determining protein MreD
D I872_02820 rod shape determining protein (cell-cycle protein) K05837 rodA; rod shape determining protein RodA
D I872_03965 putative plasmid partition protein K03496 parA; chromosome partitioning protein
D I872_10680 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I872_02660 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D I872_02645 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D I872_10555 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D I872_06380 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D I872_04555 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D I872_03975 filamentation induced by cAMP protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D I872_03085 engB; GTP-binding protein YsxC K03978 engB; GTP-binding protein
D I872_03785 cytoplasmic protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:soi03400]
D I872_06245 methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D I872_02620 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D I872_04715 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D I872_06005 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D I872_02625 Mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I872_09445 NUDIX family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I872_09470 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I872_07310 MutT/NUDIX family NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I872_01330 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I872_01415 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I872_05970 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D I872_09440 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D I872_09955 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D I872_07045 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D I872_06385 exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D I872_05380 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I872_02030 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D I872_00430 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I872_09005 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D I872_02180 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D I872_05080 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D I872_01800 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I872_00705 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I872_00710 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I872_00615 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I872_01515 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D I872_08075 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D I872_00035 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D I872_09990 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D I872_01560 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D I872_09975 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D I872_05620 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D I872_05615 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D I872_06900 dnaE; DNA polymerase III DnaE K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I872_06165 polC; DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D I872_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I872_07225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I872_06270 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I872_03330 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I872_09030 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_00815 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_08810 helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D I872_09930 recA; recombinase A K03553 recA; recombination protein RecA
D I872_09960 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D I872_00225 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D I872_08070 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D I872_09430 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D I872_10595 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D I872_01645 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D I872_00100 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D I872_02210 recR; recombination protein RecR K06187 recR; recombination protein RecR
D I872_05595 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D I872_06640 recU; Holliday junction-specific endonuclease K03700 recU; recombination protein U
D I872_06775 exonuclease RexA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D I872_06780 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D I872_02525 CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D I872_01765 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D I872_04830 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I872_02835 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I872_04570 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D I872_05575 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I872_08815 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D I872_07615 recX; recombination regulator RecX K03565 recX; regulatory protein
D I872_02810 ATP-dependent DNA helicase; DNA polymerase III, epsilon subunit K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D I872_02335 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I872_02320 nrdF; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D I872_01690 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:soi03029]
D I872_08025 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D I872_01935 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D I872_09680 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D I872_06785 elongation factor Tu K02358 tuf; elongation factor Tu
D I872_09160 elongation factor G K02355 fusA; elongation factor G
D I872_07065 era; GTPase Era K03595 era; GTPase
D I872_00695 tyrosyl-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I872_09670 leuS; leucyl-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I872_08980 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_10065 aspS; aspartyl-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I872_10000 argS; arginyl-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I872_08970 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D I872_08965 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D I872_08975 gatC; asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D I872_09030 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_00815 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I872_01260 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D I872_01255 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D I872_09525 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I872_09530 groES; co-chaperonin GroES K04078 groES; chaperonin GroES
D I872_01265 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I872_04750 pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_04900 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_09265 membrane protein (preprotein translocase) oxaA 1 K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_07825 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:soi02000]
D I872_03710 ABC transporter K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_03715 multidrig ABC transporter ATPase/permease K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_09545 ABC transporter ATP-binding protein/permease K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_09540 ATP-binding permease K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_02145 multidrug ABC transporter permease/ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_03125 permease ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_03130 ABC transporter permease K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_02150 multidrug ABC transporter permease/ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I872_08790 peptide transport ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D I872_05215 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D I872_03610 spermidine/putrescine ABC transporter spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D I872_03605 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D I872_03600 spermidine/putrescine ABC transporter transmembrane protein K11071 potB; spermidine/putrescine transport system permease protein
D I872_03595 spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D I872_04285 choline ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D I872_04280 glycine betaine/L-proline ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D I872_00295 sugar ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D I872_09305 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D I872_10030 maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D I872_10035 maltodextrin ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D I872_10040 maltodextrin ABC transporter membrane-spanning protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D I872_09325 ABC sugar transporter solute binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D I872_09335 ABC sugar transporter permease protein K17319 lplB; putative aldouronate transport system permease protein
D I872_09330 ABC sugar transporter membrane spanning permease K17320 lplC; putative aldouronate transport system permease protein
D I872_03555 lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D I872_03565 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D I872_03570 sugar ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D I872_03560 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D I872_00300 ABC transporter substrate-binding protein - sugar transport K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D I872_00305 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D I872_00310 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D I872_04065 phosphate transport protein K02040 pstS; phosphate transport system substrate-binding protein
D I872_04070 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein
D I872_04075 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein
D I872_04080 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D I872_04085 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D I872_02170 arginine/histidine ABC transporter permease K10036 glnH; glutamine transport system substrate-binding protein
D I872_02165 glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D I872_08370 L-cystine ABC transporter substrate-binding component K02424 tcyA; L-cystine transport system substrate-binding protein
D I872_06330 arginine/histidine ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D I872_06325 polar amino acid ABC transporter ATPase K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D I872_05660 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D I872_05655 ABC transporter membrane-spanning permease-branched chain amino acid transport K01997 livH; branched-chain amino acid transport system permease protein
D I872_05650 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D I872_05645 branched-chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D I872_05640 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D I872_08365 lipoprotein transporter K02073 metQ; D-methionine transport system substrate-binding protein
D I872_08350 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D I872_08355 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D I872_02430 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D I872_09415 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D I872_09410 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D I872_08560 amino acid ABC transporter substrate-binding protein K17073 lysX1; putative lysine transport system substrate-binding protein
D I872_08565 amino acid ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D I872_06545 putative periplasmic solute-binding transport protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D I872_01790 amino acid ABC transporter binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D I872_06555 glutamine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D I872_01775 amino acid (glutamine) ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D I872_06560 glutamine ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D I872_06550 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D I872_04850 peptide ABC transporter K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_08505 peptide ABC transporter periplasmic protein K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06125 oligopeptide ABC transporter oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D I872_06120 peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D I872_06115 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D I872_06110 oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D I872_06105 oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D I872_05100 metal binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D I872_00645 Zn-binding lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D I872_00640 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D I872_00635 zinc ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D I872_09645 metal ABC transporter substrate-binding lipoprotein K19971 psaA; manganese/zinc transport system substrate-binding protein
D I872_09650 ABC transporter membrane-spanning permease - manganese transport K19972 psaC; manganese/zinc transport system permease protein
D I872_09655 manganese transport protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D I872_06975 biotin synthase K03523 bioY; biotin transport system substrate-specific component
D I872_03760 hypothetical protein K16923 qrtT; energy-coupling factor transport system substrate-specific component
D I872_08335 hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D I872_08345 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D I872_01395 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D I872_10640 cobalt transport protein cbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D I872_08245 cobalt ABC transporter K16785 ecfT; energy-coupling factor transport system permease protein
D I872_10630 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D I872_10635 cbiO; cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D I872_08250 cobalt ABC transporter ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D I872_08180 multidrig ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D I872_08185 multidrig ABC transporter ATPase K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D I872_08135 peptide ABC transporter permease K19084 braE; bacitracin transport system permease protein
D I872_08190 antibiotic ABC transporter permease K19084 braE; bacitracin transport system permease protein
D I872_08140 peptide ABC transporter ATPase K19083 braD; bacitracin transport system ATP-binding protein
D I872_08195 antibiotic ABC transporter ATPase K19083 braD; bacitracin transport system ATP-binding protein
D I872_06945 ABC transporter ATP-binding protein K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D I872_02980 ATP-binding cassette transporter-like protein K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D I872_02975 ATP-binding cassette protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D I872_06950 ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D I872_02795 cell division protein K09811 ftsX; cell division transport system permease protein
D I872_02790 cell-division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I872_04465 multidrug efflux membrane protein K25154 evrC; viologen exporter family transport system permease protein
D I872_01530 membrane protein K25155 evrB; viologen exporter family transport system permease protein
D I872_04460 ABC transporter integral membrane protein K25155 evrB; viologen exporter family transport system permease protein
D I872_04455 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D I872_01525 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D I872_01585 multidrug ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D I872_01580 multidrug ABC transporter ATPase K25158 ecsA; ABC-2 type transport system ATP-binding protein
D I872_02255 Na+ ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D I872_01890 ABC-type lipopolysaccharide transport system K01992 ABC-2.P; ABC-2 type transport system permease protein
D I872_03490 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I872_08275 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D I872_01080 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I872_08610 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D I872_00755 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I872_01895 sugar ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_02250 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_03485 multidrig ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_00750 multidrug ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_08280 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_08615 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_01085 multidrug ABC transporter ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_05510 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I872_02465 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D I872_05765 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D I872_04510 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D I872_02470 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I872_05770 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I872_04505 ATP-binding transport protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I872_08775 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I872_08535 ABC transporter ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein
D I872_03280 Na+-driven multidrug efflux pump K26939 norM; MATE family, multidrug efflux pump
D I872_00410 MATE family transporter K26937 dinF; MATE family, multidrug efflux pump
D I872_07145 sugar-H+ symporter permease K02532 lacY; MFS transporter, OHS family, lactose permease
D I872_05560 major facilitator superfamily transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D I872_10385 transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D I872_07035 major facilitator superfamily multi-drug resistance efflux pump PmrA K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D I872_02350 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D I872_02345 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D I872_06100 PTS system glucose/maltose-specific transporter subunit IIBCA K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D I872_08400 PTS system transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D I872_05245 PTS system fructose specific transporter subunit IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D I872_06870 PTS system enzyme IIBC component (galactitol/fructose specific) K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D I872_06865 PTS system transporter subunit IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D I872_06860 PTS system galactitol-specific family transporter subunit IIC K20114 gatC; galactose PTS system EIIC component
D I872_08480 PTS system mannost-specific transporter subunits IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D I872_00205 phosphotransferase system sugar-specific EII component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D I872_08485 PTS system mannose-specific transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_00195 PTS system transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D I872_08490 PTS system mannose family transporter subunit IID K02796 manZ; mannose PTS system EIID component
D I872_00200 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D I872_01445 aquaporin K06188 aqpZ; aquaporin Z
D I872_09070 glycerol uptake facilitator/aquaporin protein K02440 glpF; glycerol uptake facilitator
D I872_03455 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D I872_09665 potassium channel family protein K10716 kch; voltage-gated potassium channel
D I872_08695 ion transport protein, putative K10716 kch; voltage-gated potassium channel
D I872_03995 large conductance mechano-sensitive ion channel K03282 mscL; large conductance mechanosensitive channel
D I872_01225 mechanosensitive ion channel protein K22044 ybiO; moderate conductance mechanosensitive channel
D I872_09010 magnesium and cobalt transporter K03284 corA; magnesium transporter
D I872_01710 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D I872_01715 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D I872_07290 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I872_02100 effector of murein hydrolase LrgA/holin-like protein K06518 cidA; holin-like protein
D I872_10375 cation (Co/Zn/Cd) efflux protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D I872_01220 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D I872_07665 NhaP-type Na+/H+ and K+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D I872_05130 sodium transport family protein K03498 trkH; trk/ktr system potassium uptake protein
D I872_07715 Trk family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D I872_05125 Trk transporter NAD+ binding protein-K+ transport K03499 trkA; trk/ktr system potassium uptake protein
D I872_07710 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D I872_03750 xanthine/uracil permease K02824 uraA; uracil permease
D I872_03275 xanthine permease K16169 pbuX; xanthine permease
D I872_06530 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D I872_03235 voltage gated chloride channel EriC K03281 clcA; chloride channel protein, CIC family
D I872_02505 voltage-gated chloride channel family protein,CIC family K03281 clcA; chloride channel protein, CIC family
D I872_06595 Na/Pi-cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D I872_01310 transport protein-like protein K26605 azlC; branched chain amino acid efflux pump
D I872_01315 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D I872_07695 hypothetical protein K23675 fmnP; riboflavin transporter
D I872_03730 hypothetical protein K16788 niaX; niacin transporter
D I872_09675 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D I872_06915 cell division protein K03588 ftsW; cell division protein FtsW
D I872_03250 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D I872_03240 periplasmic iron transport lipoprotein K07224 efeO; iron uptake system component EfeO
D I872_03245 Iron-dependent peroxidase K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D I872_03170 cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D I872_03200 cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D I872_02970 ATP-binding cassette transporter-like protein K24950 yknX; membrane fusion protein, antimicrobial resistance system
D I872_06955 membrane-fusion protein / periplasmic component of efflux system K24950 yknX; membrane fusion protein, antimicrobial resistance system
D I872_09830 putative autophosphorylating protein tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D I872_09835 MPA1 family polysaccharide export protein K19420 epsA; protein tyrosine kinase modulator
D I872_01410 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
C 02044 Secretion system [BR:soi02044]
D I872_07330 YlmG protein K02221 yggT; YggT family protein
D I872_06810 DNA uptake protein K02237 comEA; competence protein ComEA
D I872_01950 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D I872_06805 competence protein K02238 comEC; competence protein ComEC
D I872_06055 superfamily II ATP-dependent DNA/RNA helicase K02240 comFA; competence protein ComFA
D I872_06050 late competence protein K02242 comFC; competence protein ComFC
D I872_09755 competence protein ComYA K02243 comGA; competence protein ComGA
D I872_09750 competence protein ComYB K02244 comGB; competence protein ComGB
D I872_09745 competence protein ComYC K02245 comGC; competence protein ComGC
D I872_09740 competence protein ComYD K02246 comGD; competence protein ComGD
D I872_09730 competence protein ComGF K02248 comGF; competence protein ComGF
D I872_07420 type 4 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D I872_03915 TraG protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D I872_01620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_07255 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I872_09695 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I872_07025 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I872_00585 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_07275 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I872_04485 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I872_05680 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D I872_06205 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I872_09265 membrane protein (preprotein translocase) oxaA 1 K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_07825 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I872_07270 glycosylation associated protein, mature Fap1 export and glycosylation,gap1 K12268 asp1; accessory secretory protein Asp1
D I872_07265 accessory secretory protein Asp2 K12269 asp2; accessory secretory protein Asp2
D I872_07260 accessory secretory protein asp3 K12270 asp3; accessory secretory protein Asp3
D I872_03260 twin arginine-targeting protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D I872_03255 Sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:soi02042]
D I872_05205 exfoliative toxin A K11041 eta; exfoliative toxin A/B
D I872_07290 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I872_03500 hemolysin III-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:soi02022]
D I872_05730 histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D I872_05735 two-component response transcriptional regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D I872_06230 two-component response transcriptional regulator K11521 manR; two-component system, OmpR family, manganese sensing response regulator
D I872_03165 histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D I872_03160 two-component response transcriptional regulator K10682 saeR; two-component system, OmpR family, response regulator SaeR
D I872_08205 histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D I872_08210 two-component response transcriptional regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D I872_04150 sensor protein ciaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D I872_04145 two-component response transcriptional regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D I872_02990 two component system histidine kinase K18986 ihk; two-component system, OmpR family, sensor kinase Ihk [EC:2.7.13.3]
D I872_02985 two-component response transcriptional regulator K18987 irr; two-component system, OmpR family, response regulator Irr
D I872_00770 sensor protein K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D I872_00765 DNA response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D I872_08605 histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D I872_08600 two-component response transcriptional regulator K07693 desR; two-component system, NarL family, response regulator DesR
D I872_06085 histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D I872_06080 two-component response transcriptional regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D I872_05520 hypothetical protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D I872_05525 response regulator of the competence regulon K07707 agrA; two-component system, LytTR family, response regulator AgrA
D I872_10665 signal transduction protein K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D I872_10660 two-component system LytR/AlgR family transcriptional regulator K12295 comE; two-component system, LytTR family, response regulator ComE
D I872_08175 LytTr family transcriptional regulator K02477 K02477; two-component system, LytTR family, response regulator
D I872_03195 two-component sensor kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D I872_09315 sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D I872_09310 response regulator K07720 yesN; two-component system, response regulator YesN
D I872_03190 two-component response transcriptional regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:soi02035]
D I872_08370 L-cystine ABC transporter substrate-binding component K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:soi04812]
D I872_07345 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I872_07350 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D I872_03965 putative plasmid partition protein K03496 parA; chromosome partitioning protein
D I872_10680 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:soi04147]
D I872_02875 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I872_09155 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I872_09145 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D I872_06890 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I872_05975 cyclophilin type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I872_07800 flotillin family protein K07192 FLOT; flotillin
D I872_09525 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I872_01260 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D I872_09600 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I872_10590 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I872_06785 elongation factor Tu K02358 tuf; elongation factor Tu
D I872_01575 diadenosine tetraphosphate (Ap4A) hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I872_04835 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D I872_04625 acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I872_00590 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D I872_05375 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D I872_00460 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D I872_09370 alpha-L-fucosidase K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D I872_04025 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I872_02365 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D I872_03445 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I872_09130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I872_06250 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I872_09090 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I872_04520 acetoin dehydrogenase complex, E3 component,dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I872_05870 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I872_02720 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I872_05550 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:soi02048]
D I872_02525 CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D I872_01765 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D I872_01770 CRISPR-associated protein cas2 K09951 cas2; CRISPR-associated protein Cas2
D I872_02530 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
D I872_01725 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D I872_01760 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D I872_02540 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D I872_01755 CRISPR-associated protein csd2 K19118 csd2; CRISPR-associated protein Csd2
D I872_01730 CRISPR-associated protein cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D I872_02545 HD superfamily hydrolase K07016 csm1; CRISPR-associated protein Csm1
D I872_02550 hypothetical protein K19138 csm2; CRISPR-associated protein Csm2
D I872_02555 hypothetical protein K09002 csm3; CRISPR-associated protein Csm3
D I872_02560 hypothetical protein K19139 csm4; CRISPR-associated protein Csm4
D I872_02565 hypothetical protein K19140 csm5; CRISPR-associated protein Csm5
D I872_02305 type I restriction-modification system, helicase subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D I872_01105 type I restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D I872_02290 type I restriction-modification system S protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D I872_01115 Type I restriction-modification system DNA methylase K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D I872_01110 type I restriction-modification system DNA-methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D I872_09720 adenine-specific DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D I872_06690 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D I872_05830 hypothetical protein K03973 pspC; phage shock protein C
D I872_05960 hypothetical protein K03973 pspC; phage shock protein C
D I872_07100 hypothetical protein K03973 pspC; phage shock protein C
D I872_01135 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D I872_04360 zeta toxin K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
D I872_04355 DNA-binding helix-turn-helix protein K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D I872_04985 hypothetical protein K21494 yxxD; antitoxin YxxD
D I872_07345 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I872_02660 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D I872_02645 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D I872_04750 pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I872_04900 class-V aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:soi01504]
D I872_07050 hypothetical protein K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D I872_02650 aminoglycoside adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D I872_07950 putative translation elongation factor G K18220 tetM; ribosomal protection tetracycline resistance protein
D I872_07900 erythromycin resistance protein K00561 ermC; 23S rRNA (adenine-N6)-dimethyltransferase [EC:2.1.1.184]
D I872_03805 penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I872_07215 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D I872_07840 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_05980 D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D I872_10410 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D I872_10405 hypothetical protein K03739 dltB; membrane protein involved in D-alanine export
D I872_10400 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D I872_10395 D-alanine transfer protein K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:soi00536]
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:soi03100]
D I872_t10692 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10718 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10772 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10714 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I872_t10756 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10744 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10790 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10752 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I872_t10716 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I872_t10786 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I872_t10768 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D I872_t10784 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D I872_t10750 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I872_t10740 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I872_t10700 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I872_t10788 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I872_t10726 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I872_t10760 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10696 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10708 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10722 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I872_t10738 tRNA-His K14226 tRNA-His; tRNA His
D I872_t10698 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I872_t10724 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I872_t10710 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I872_t10742 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10758 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10776 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10764 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I872_t10766 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I872_t10782 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I872_t10704 tRNA-Met K14230 tRNA-Met; tRNA Met
D I872_t10730 tRNA-Met K14230 tRNA-Met; tRNA Met
D I872_t10706 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I872_t10732 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I872_t10754 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I872_t10702 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10728 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10712 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10746 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I872_t10778 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I872_t10762 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I872_t10774 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I872_t10736 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D I872_t10748 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I872_t10734 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I872_t10694 tRNA-Val K14237 tRNA-Val; tRNA Val
D I872_t10770 tRNA-Val K14237 tRNA-Val; tRNA Val
D I872_t10720 tRNA-Val K14237 tRNA-Val; tRNA Val
D I872_r10800 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10804 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10802 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10806 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I872_r10812 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10814 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10810 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10808 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I872_r10792 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10794 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10798 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I872_r10796 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D I872_06565 L-lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D I872_04600 acyl-CoA dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-]
D I872_03185 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D I872_06220 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D I872_09640 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D I872_03790 ferredoxin--NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D I872_09850 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D I872_07285 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D I872_07000 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D I872_06625 hypothetical protein K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D I872_02440 acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D I872_09465 GNAT family acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D I872_04580 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D I872_05810 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D I872_03220 thiamin biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D I872_08635 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D I872_06725 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D I872_00975 phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D I872_00955 phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D I872_05815 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D I872_09285 tributyrin esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D I872_09840 wzh/putative phosphotyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D I872_06435 HAD family phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D I872_10550 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D I872_09230 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D I872_09220 ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D I872_07150 DD-carboxypeptidase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D I872_06150 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D I872_08390 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D I872_04160 peptidoglycan N-acetylglucosamine deacetylase A K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D I872_03770 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D I872_05630 putative carbohydrate kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D I872_02775 calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D I872_05430 calcium-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D I872_05875 cation (Mg/Ni uptake) transport ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D I872_06820 cation transport ATPase K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D I872_07645 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D I872_01920 ferredoxin K05337 fer; ferredoxin
D I872_08520 NifU family protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D I872_03795 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D I872_05230 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D I872_05580 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D I872_10010 flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D I872_08155 NrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
D I872_00165 hypothetical protein K15051 endA; DNA-entry nuclease
D I872_03050 DNA-entry nuclease K15051 endA; DNA-entry nuclease
D I872_09215 hypothetical protein K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D I872_05950 lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein
D I872_07340 pyridoxal 5'-phosphate dependent enzymes class III K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D I872_04045 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D I872_09925 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D I872_05840 transcriptional accessory ribonuclease (YqgFc, S1) K06959 tex; protein Tex
C 99974 Translation
D I872_06070 hypothetical protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D I872_08740 tig; trigger factor K03545 tig; trigger factor
D I872_07015 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D I872_02340 glutaredoxin-like protein K06191 nrdH; glutaredoxin-like protein NrdH
D I872_08545 adaptor protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D I872_07685 DNA methyltransferase protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D I872_04770 hypothetical protein K03630 radC; DNA repair protein RadC
D I872_09190 competence-induced protein Ccs50 K09760 rmuC; DNA recombination protein RmuC
D I872_06830 hypothetical protein K07461 K07461; putative endonuclease
D I872_04575 DNA processing Smf protein K04096 smf; DNA processing protein
D I872_05365 DNA replication protein DnaD K02086 dnaD; DNA replication protein
D I872_07890 Cro/CI family transcriptional regulator K07467 nicK; putative DNA relaxase
D I872_09485 recombination factor protein RarA K07478 ycaJ; putative ATPase
D I872_05445 transposase for insertion sequence element IS1086 K07482 K07482; transposase, IS30 family
D I872_10130 IS3-Spn1, transposase K07483 K07483; transposase
D I872_01675 transposase K07483 K07483; transposase
D I872_06650 transposase K07483 K07483; transposase
D I872_06970 transposase K07483 K07483; transposase
D I872_07910 transposase K07485 K07485; transposase
D I872_07410 transposase K07497 K07497; putative transposase
D I872_06655 transposase K07497 K07497; putative transposase
D I872_06965 transposase K07497 K07497; putative transposase
D I872_10120 transposase K07497 K07497; putative transposase
D I872_10125 integrase core subunit K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D I872_09085 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D I872_08090 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D I872_08130 cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D I872_08870 D-alanine/glycine/Na permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D I872_03145 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D I872_06620 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D I872_09260 RNA-binding protein K06346 jag; spoIIIJ-associated protein
D I872_06440 site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D I872_05415 stress response protein, TerZ- and CABP1 K05795 terD; tellurium resistance protein TerD
D I872_05420 stress protein K05795 terD; tellurium resistance protein TerD
D I872_05425 Tellurium resistance protein terD,TerD family K05795 terD; tellurium resistance protein TerD
D I872_07375 GTP-binding protein TypA K06207 typA; GTP-binding protein
D I872_07860 hypothetical protein K07166 K07166; ACT domain-containing protein
D I872_02315 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D I872_06920 1,4-beta-N-acetylmuramidase K07273 acm; lysozyme
D I872_05985 hypothetical protein K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D I872_04090 phosphate transporter PhoU K02039 phoU; phosphate transport system protein
D I872_03700 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D I872_07200 hypothetical protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D I872_07630 acetyltransferase K02348 elaA; ElaA protein
D I872_07140 competence protein K06198 coiA; competence protein CoiA
D I872_00810 phenylalanyl-tRNA synthetase subunit beta K06878 K06878; tRNA-binding protein
D I872_10435 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D I872_02715 haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D I872_10530 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D I872_08515 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D I872_08530 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D I872_01985 Ribonuclease BN K07058 K07058; membrane protein
D I872_08305 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D I872_06370 cytoplasmic membrane protein K03744 lemA; LemA protein
D I872_05835 hypothetical protein K03095 sprL; SprT-like protein
D I872_10460 hypothetical protein K01421 yhgE; putative membrane protein
D I872_06925 hypothetical protein K08974 K08974; putative membrane protein
D I872_05855 hypothetical protein K08986 ycgQ; putative membrane protein
D I872_03800 hypothetical protein K08987 K08987; putative membrane protein
D I872_03735 PhnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D I872_10115 ankyrin repeat-containing protein K06867 K06867; uncharacterized protein
D I872_02765 hypothetical protein K06885 K06885; uncharacterized protein
D I872_07805 hypothetical protein K06890 K06890; uncharacterized protein
D I872_00435 CoA-binding domain-containing protein K06929 K06929; uncharacterized protein
D I872_05175 Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D I872_07810 HD superfamily metal-dependent phosphohydrolase K06950 K06950; uncharacterized protein
D I872_05140 RNA-binding protein K06960 K06960; uncharacterized protein
D I872_05850 permease K07089 K07089; uncharacterized protein
D I872_07525 hypothetical protein K07095 K07095; uncharacterized protein
D I872_03725 biotin repressor family transcriptional regulator K07105 K07105; uncharacterized protein
D I872_05460 hypothetical protein K07124 K07124; uncharacterized protein
D I872_07680 hypothetical protein K07139 K07139; uncharacterized protein
D I872_07495 hypothetical protein K08998 K08998; uncharacterized protein
D I872_07570 hemerythrin HHE cation binding domain subfamily, putative K09155 K09155; uncharacterized protein
D I872_07855 hypothetical protein K09157 K09157; uncharacterized protein
D I872_09355 hypothetical protein K09704 K09704; uncharacterized protein
D I872_04480 DNA-binding protein K09787 K09787; uncharacterized protein
D I872_05720 hypothetical protein K09790 K09790; uncharacterized protein
D I872_02270 S1 RNA-binding domain-containing protein K00243 K00243; uncharacterized protein
D I872_03510 hypothetical protein K09861 K09861; uncharacterized protein
D I872_01170 hypothetical protein K09975 K09975; uncharacterized protein
D I872_07540 hypothetical protein K09976 K09976; uncharacterized protein
D I872_04880 hypothetical protein K07584 ysxB; uncharacterized protein
D I872_07620 hypothetical protein K07586 ygaC; uncharacterized protein
D I872_08035 hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024