+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Serratia plymuthica 4Rx13

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ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system B Type II R-M system C Restriction endonucleases C DNA methyltransferases D SOD_c44020 dam; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D SOD_c36160 hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D SOD_p00060 hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D SOD_c04470 hgiDIIM; modification methylase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C SOD_c36120 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok D SOD_c08020 putative hok/gef family toxin K18919 hokC_D; protein HokC/D C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D SOD_c00150 CopG family transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D SOD_p00130 prevent-host-death family protein K18923 stbD; antitoxin StbD D SOD_c15230 prevent-host-death protein K18923 stbD; antitoxin StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB D SOD_c04450 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D SOD_c04440 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB D SOD_c33140 transcriptional regulatory protein K18843 hicB; antitoxin HicB C YafO-YafN C Hha-TomB D SOD_c09540 tomB; Hha toxicity modulator TomB K19162 tomB; hha toxicity modulator TomB C PspC-PspB D SOD_c24770 pspC; phage shock protein C K03973 pspC; phage shock protein C D SOD_c24780 pspB; phage shock protein B K03970 pspB; phage shock protein B C CcdB-CcdA C ParE-ParD D SOD_c00160 hypothetical protein associated with plasmid stabilization K19092 parE1_3_4; toxin ParE1/3/4 C Doc-Phd C HigB-HigA D SOD_c41260 higB; mRNA interferase HigB K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D SOD_c04030 higA1; antitoxin HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D SOD_c41270 higA; antitoxin HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D SOD_c44180 putative VapC ribonuclease Y4jK K07062 fitB; toxin FitB [EC:3.1.-.-] D SOD_c44170 plasmid stability protein-like protein K21495 fitA; antitoxin FitA C BC_0920-BC_0921 C Type II TA system related factors D SOD_c17200 bssS; biofilm regulator BssS K12148 bssS; biofilm regulator BssS D SOD_c12820 putative secreted protein K12151 bhsA; multiple stress resistance protein BhsA D SOD_c12830 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA D SOD_c06320 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D SOD_c42140 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D SOD_c40730 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D SOD_c40770 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D SOD_c33340 gltX; glutamate--tRNA ligase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU D SOD_c10200 ypjF; putative toxin YpjF K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D SOD_c10190 yagB; putative protein YagB K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins C CptA-CptB D SOD_c38530 cptA; toxin CptA K19168 cptA; toxin CptA D SOD_c38540 putative antitoxin K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C SOD_c35590 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C SOD_c10110 hypothetical protein K19169 dndB; DNA sulfur modification protein DndB C SOD_c10100 putative DNA sulfurtransferase K19170 dndC; DNA sulfur modification protein DndC C SOD_c10090 putative DNA sulfur modification protein K19171 dndD; DNA sulfur modification protein DndD C SOD_c10080 putative DNA thiolation protein; putative phage protein' K19172 dndE; DNA sulfur modification protein DndE B DNA phosphorothioation-dependent restriction proteins C SOD_c10040 hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF C SOD_c10050 hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG C SOD_c10060 cell division FtsK/SpoIIIE domain-containing protein K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023