+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Serratia plymuthica 4Rx13
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ACRISPR-Cas system
B Universal Cas proteins
B Type I CRISPR-Cas system
C Type I signiture cas proteins
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D SOD_c44020 dam; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SOD_c36160 hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SOD_p00060 hypothetical protein K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SOD_c04470 hgiDIIM; modification methylase HgiDII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C SOD_c36120 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
D SOD_c08020 putative hok/gef family toxin K18919 hokC_D; protein HokC/D
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D SOD_c00150 CopG family transcriptional regulator K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D SOD_p00130 prevent-host-death family protein K18923 stbD; antitoxin StbD
D SOD_c15230 prevent-host-death protein K18923 stbD; antitoxin StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
D SOD_c04450 hipA; serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D SOD_c04440 helix-turn-helix domain protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
C HicA-HicB
D SOD_c33140 transcriptional regulatory protein K18843 hicB; antitoxin HicB
C YafO-YafN
C Hha-TomB
D SOD_c09540 tomB; Hha toxicity modulator TomB K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D SOD_c24770 pspC; phage shock protein C K03973 pspC; phage shock protein C
D SOD_c24780 pspB; phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
C ParE-ParD
D SOD_c00160 hypothetical protein associated with plasmid stabilization K19092 parE1_3_4; toxin ParE1/3/4
C Doc-Phd
C HigB-HigA
D SOD_c41260 higB; mRNA interferase HigB K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D SOD_c04030 higA1; antitoxin HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D SOD_c41270 higA; antitoxin HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D SOD_c44180 putative VapC ribonuclease Y4jK K07062 fitB; toxin FitB [EC:3.1.-.-]
D SOD_c44170 plasmid stability protein-like protein K21495 fitA; antitoxin FitA
C BC_0920-BC_0921
C Type II TA system related factors
D SOD_c17200 bssS; biofilm regulator BssS K12148 bssS; biofilm regulator BssS
D SOD_c12820 putative secreted protein K12151 bhsA; multiple stress resistance protein BhsA
D SOD_c12830 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D SOD_c06320 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SOD_c42140 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D SOD_c40730 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SOD_c40770 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SOD_c33340 gltX; glutamate--tRNA ligase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
D SOD_c10200 ypjF; putative toxin YpjF K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins
D SOD_c10190 yagB; putative protein YagB K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins
C CptA-CptB
D SOD_c38530 cptA; toxin CptA K19168 cptA; toxin CptA
D SOD_c38540 putative antitoxin K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C SOD_c35590 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C SOD_c10110 hypothetical protein K19169 dndB; DNA sulfur modification protein DndB
C SOD_c10100 putative DNA sulfurtransferase K19170 dndC; DNA sulfur modification protein DndC
C SOD_c10090 putative DNA sulfur modification protein K19171 dndD; DNA sulfur modification protein DndD
C SOD_c10080 putative DNA thiolation protein; putative phage protein' K19172 dndE; DNA sulfur modification protein DndE
B DNA phosphorothioation-dependent restriction proteins
C SOD_c10040 hypothetical protein K19173 dptF; DNA phosphorothioation-dependent restriction protein DptF
C SOD_c10050 hypothetical protein K19174 dptG; DNA phosphorothioation-dependent restriction protein DptG
C SOD_c10060 cell division FtsK/SpoIIIE domain-containing protein K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023