+D GENES KO
#
KEGG Orthology (KO) - Salinibacter ruber M8
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:srm00010]
D SRM_00963 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SRM_00085 tal; Putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SRM_02332 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SRM_02064 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01667 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_02117 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SRM_02116 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SRM_01388 GPD; Glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SRM_02575 gpmI; Phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SRM_02205 Metalloenzyme superfamily protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SRM_00965 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SRM_01227 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SRM_01316 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SRM_02187 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SRM_02186 pdhB; pyruvate dehydrogenase complex, E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SRM_02185 pdhC; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SRM_00990 sucB; Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_00501 korA; 2-oxoacid--ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SRM_00502 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SRM_00857 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SRM_00890 adh; Alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SRM_01456 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_02029 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01888 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_02044 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SRM_02593 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:srm00020]
D SRM_00569 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SRM_02074 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SRM_01670 citB; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SRM_02189 icd; Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SRM_01881 icd; Isocitrate dehydrogenase, NAD-dependent K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D SRM_01356 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_00501 korA; 2-oxoacid--ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SRM_00502 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SRM_00846 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SRM_01302 sucC; Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SRM_00566 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SRM_02664 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SRM_00565 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SRM_00568 sdhD; Succinate dehydrogenase hydrophobic membrane anchor subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SRM_00567 sdhA; Succinate dehydrogenase flavoprotein subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SRM_01768 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SRM_02044 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SRM_02593 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SRM_02187 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SRM_02186 pdhB; pyruvate dehydrogenase complex, E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SRM_02185 pdhC; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SRM_00990 sucB; Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:srm00030]
D SRM_00085 tal; Putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D SRM_00083 zwf; Glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SRM_01048 nagB; Glucosamine-6-phosphate deaminase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D SRM_00084 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SRM_00008 rpe; Ribulose-phosphate-3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SRM_00350 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SRM_02155 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SRM_00351 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SRM_00591 rpiA; Ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SRM_01417 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SRM_00535 prs; Ribose-phosphate pyrophosphokinase 1 K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SRM_00994 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SRM_01748 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SRM_02117 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SRM_02064 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01667 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SRM_02332 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:srm00040]
D SRM_01183 Uncharacterized ACR, double-stranded beta-helix domain K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D SRM_02917 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_00691 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_01456 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SRM_00008 rpe; Ribulose-phosphate-3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SRM_01175 glpK; Glycerol kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D SRM_01174 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D SRM_01994 aldHT; Aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
C 00051 Fructose and mannose metabolism [PATH:srm00051]
D SRM_01482 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SRM_02587 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SRM_00658 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SRM_02332 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SRM_02064 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01667 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01174 xylA; Xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D SRM_02117 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SRM_02116 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SRM_01019 sugar phosphotransferase system protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SRM_02959 yfbT; phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:srm00052]
D SRM_01476 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SRM_01984 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SRM_00790 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SRM_00963 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SRM_02332 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SRM_02237 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SRM_02235 Conserved hypothetical protein containing tagatose 6 phosphate kinase domain K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D SRM_02236 glmS; Glucosamine--fructose-6-phosphateaminotransferase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:srm00053]
D SRM_02917 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_00691 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_01456 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SRM_00247 wcaG; Nucleoside-diphosphate-sugar epimerase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D SRM_00716 wcaG; Sugar epimerase BlmG K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D SRM_00715 lspL; UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SRM_00802 NAD-dependent epimerase/dehydratase family K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:srm00500]
D SRM_03061 bglX; Periplasmic beta-glucosidase [Precursor] K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SRM_02142 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SRM_00969 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SRM_01029 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SRM_00079 glgP; Glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SRM_01030 treS; trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D SRM_02953 glycosyl hydrolase, family 13 K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D SRM_00836 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SRM_01031 Glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D SRM_02143 rfaG; Glycosyl transferase group 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D SRM_01032 glgX; Glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D SRM_00835 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D SRM_00659 otsB; trehalose-6-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D SRM_00660 otsA; Trehalose-6-phosphate synthase domain, putative K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D SRM_00963 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SRM_00085 tal; Putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:srm00520]
D SRM_03029 chiA; Chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D SRM_00449 bglX; beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SRM_00445 chb; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SRM_02747 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SRM_01558 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SRM_00065 glucokinase regulatory protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D SRM_02643 Conserved hypothetical protein containing UPF0075 K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D SRM_02067 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SRM_02408 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SRM_00718 tuaD; UDP-glucose/GDP-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D SRM_00963 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SRM_02917 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_00691 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_01476 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SRM_01984 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SRM_00790 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SRM_00715 lspL; UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SRM_00802 NAD-dependent epimerase/dehydratase family K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SRM_00085 tal; Putative Transaldolase Phosphoglucose isomerase K13810 tal-pgi; transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9]
D SRM_01482 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SRM_02587 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SRM_00658 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SRM_00695 wecE; perosamine synthetase, putative K13010 per; perosamine synthetase [EC:2.6.1.102]
D SRM_00247 wcaG; Nucleoside-diphosphate-sugar epimerase K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D SRM_00716 wcaG; Sugar epimerase BlmG K10046 GME; GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]
D SRM_02142 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:srm00620]
D SRM_02029 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01888 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_00501 korA; 2-oxoacid--ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SRM_00502 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SRM_02187 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SRM_02186 pdhB; pyruvate dehydrogenase complex, E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SRM_02185 pdhC; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SRM_00990 sucB; Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_00890 adh; Alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SRM_01456 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SRM_01227 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SRM_02569 accA; Acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SRM_01129 accB; Acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SRM_01131 accC; Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SRM_01335 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SRM_02285 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_00857 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SRM_02565 Conserved hypothetical protein containing glyoxalase domain K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SRM_00405 gloB; Metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SRM_02304 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SRM_01998 Malic oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SRM_01768 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SRM_00100 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SRM_02044 pckA; Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SRM_02593 pckA; Phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SRM_01316 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_02375 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SRM_02370 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:srm00630]
D SRM_02029 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01888 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01768 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SRM_00569 gltA; Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SRM_02074 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SRM_01670 citB; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_00070 maoC; putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D SRM_02473 pccB; Propionyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D SRM_02003 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SRM_02004 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SRM_00826 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D SRM_01837 gph; Phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SRM_01351 gltB; Ferredoxin-dependent glutamate synthase 1 K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D SRM_00461 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SRM_00954 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SRM_01446 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SRM_01817 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_02293 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SRM_01748 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SRM_01356 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D SRM_01702 Putative cyclase superfamily K07130 kynB; arylformamidase [EC:3.5.1.9]
C 00640 Propanoate metabolism [PATH:srm00640]
D SRM_02029 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01888 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_00667 acoA_pdhA; 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SRM_02182 bkdA2; Pyruvate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_01907 caiA; acyl-Coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D SRM_01567 Zinc-containing alcohol dehydrogenase superfamily K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_02569 accA; Acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SRM_01129 accB; Acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SRM_01131 accC; Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SRM_01335 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SRM_02473 pccB; Propionyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D SRM_02003 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SRM_02004 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SRM_01302 sucC; Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SRM_00846 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SRM_00857 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SRM_01814 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:srm00650]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_01605 mmgB; Probable 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SRM_01398 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_00070 maoC; putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D SRM_00566 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SRM_02664 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SRM_00565 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SRM_00568 sdhD; Succinate dehydrogenase hydrophobic membrane anchor subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SRM_00567 sdhA; Succinate dehydrogenase flavoprotein subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SRM_01538 ssdA; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SRM_00501 korA; 2-oxoacid--ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SRM_00502 porB; 2-oxoacid:ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SRM_01435 mvaB; Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SRM_02366 ilvB; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SRM_02367 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:srm00660]
D SRM_02366 ilvB; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SRM_02367 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SRM_01302 sucC; Succinyl-CoA synthetase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SRM_00846 sucD; succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SRM_02371 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SRM_02373 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SRM_02369 leuB; Isocitrate/isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:srm00562]
D SRM_00614 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SRM_02116 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:srm00190]
D SRM_00469 NADH-ubiquinone oxidoreductase K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D SRM_00470 nuoB; NADH-quinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D SRM_00471 nuoC; NADH-quinone oxidoreductase chain c/d K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D SRM_00472 nuoD; NADH-ubiquinone oxidoreductase, chain 49kDa K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D SRM_00473 nuoE; NADH dehydrogenase (ubiquinone), 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D SRM_00474 nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D SRM_00476 nuoG; NADH-quinone oxidoreductase chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D SRM_02998 nuoH; NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D SRM_00578 nuoI; NADH dehydrogenase I, I subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D SRM_01635 nuoJ; NADH dehydrogenase I, J subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D SRM_01636 nuoK; NADH dehydrogenase I, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D SRM_01637 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D SRM_01638 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D SRM_01640 nuoN; Proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D SRM_02438 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SRM_00566 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SRM_02664 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SRM_00565 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SRM_00568 sdhD; Succinate dehydrogenase hydrophobic membrane anchor subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SRM_00567 sdhA; Succinate dehydrogenase flavoprotein subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D SRM_02589 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SRM_02316 ctaF; putative cytochrome oxidase subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D SRM_02317 ctaE; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D SRM_02318 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D SRM_00394 cyoB; Cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D SRM_02319 ctaC; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D SRM_00393 cyoA; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D SRM_02588 ctaA; Cytochrome aa3-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SRM_00402 ctaD; Cytochrome c oxidase subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SRM_01108 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SRM_02647 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SRM_01109 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SRM_01107 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SRM_02648 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SRM_01104 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SRM_01106 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SRM_01105 atpH; ATP synthase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SRM_02240 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SRM_02217 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D SRM_02180 conserved hypothetical protein containing Inorganic pyrophosphatase domain K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:srm00680]
D SRM_00954 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SRM_01748 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SRM_00965 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SRM_00100 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SRM_01768 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SRM_02117 fbaB; fructose-bisphosphate aldolase class I K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SRM_02064 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01667 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SRM_02332 pfkA; 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D SRM_02029 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01888 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01316 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D SRM_02575 gpmI; Phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SRM_02205 Metalloenzyme superfamily protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SRM_02433 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SRM_00021 comA; Phosphosulfolactate synthase K08097 comA; phosphosulfolactate synthase [EC:4.4.1.19]
D SRM_01818 comB; Probable 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:srm00910]
D SRM_00384 nosZ; Nitrous-oxide reductase [Precursor] K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D SRM_00586 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_02482 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_00461 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SRM_01352 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SRM_01351 gltB; Ferredoxin-dependent glutamate synthase 1 K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
C 00920 Sulfur metabolism [PATH:srm00920]
D SRM_00674 cysN; Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SRM_00671 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SRM_01520 hal2; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SRM_01202 Dhh family/dhha1 domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SRM_00499 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SRM_00397 hcaD; putative filamentous hemagglutinin K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D SRM_01185 cysA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SRM_00560 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SRM_01342 cysA; Putative cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SRM_01563 metB; Cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D SRM_02552 Bacterial luciferase-like K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:srm00061]
D SRM_02569 accA; Acetyl-CoA carboxylase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SRM_01129 accB; Acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SRM_01131 accC; Acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SRM_01335 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SRM_02965 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
D SRM_00041 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SRM_00040 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SRM_02949 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SRM_02964 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SRM_01333 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_01141 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00043 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00912 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_02896 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00615 fab1; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SRM_01397 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_02599 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:srm00071]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_01652 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01399 thlA; Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_01398 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SRM_01907 caiA; acyl-Coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D SRM_01401 fadE; acyl-coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D SRM_01295 Acyl-CoA dehydrogenases K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_00132 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_01397 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_02599 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_00890 adh; Alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:srm00561]
D SRM_01748 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01456 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SRM_01814 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SRM_01664 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SRM_00039 plsX; Fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SRM_01673 conserved hypothetical protein, membrane K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SRM_02527 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SRM_02724 Conserved hypothetical protein of unknown function UPF0089 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D SRM_01911 conserved hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D SRM_02040 pldB; lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
C 00564 Glycerophospholipid metabolism [PATH:srm00564]
D SRM_01666 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SRM_01674 gpsA; Glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SRM_01656 glpA; FAD-dependent glycerol-3-phosphate dehydrogenase subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SRM_02657 glpA; Glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SRM_01673 conserved hypothetical protein, membrane K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SRM_02527 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SRM_00662 glpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SRM_01737 glpQ; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SRM_01920 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SRM_00419 pssA; phosphatidylcholine synthase K01004 pcs; phosphatidylcholine synthase [EC:2.7.8.24]
D SRM_01155 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SRM_01154 psd; Phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D SRM_01493 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SRM_02394 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:srm00600]
D SRM_00445 chb; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:srm00592]
D SRM_01907 caiA; acyl-Coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D SRM_01652 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01399 thlA; Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:srm01040]
D SRM_01907 caiA; acyl-Coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:srm00230]
D SRM_02336 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SRM_00535 prs; Ribose-phosphate pyrophosphokinase 1 K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SRM_00994 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SRM_01090 purF; Glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SRM_02070 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SRM_01840 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SRM_02873 purL; Phosphoribosylformylglycinamidine synthase K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D SRM_01156 purL; Phosphoribosylformylglycinamidine (FGAM) synthase K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D SRM_00601 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SRM_01672 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SRM_01820 purK; phosphoribosylaminoimidazole carboxylase ATPase-subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SRM_01821 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SRM_01713 purC; Phosphoribosylaminoimidazole-succinocarboxamidesynthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SRM_00462 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SRM_01841 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SRM_02050 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SRM_01689 nagD; N-acetylglucosamine-6-phosphate deacetylase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SRM_02355 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SRM_00868 punA; Purine nucleoside phosphorylase I K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SRM_02459 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SRM_01917 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SRM_01694 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SRM_01273 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SRM_01354 yggV; HAM1 protein homolog K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SRM_02292 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SRM_01168 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SRM_00941 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SRM_01518 Probable cytidine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D SRM_00029 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SRM_00377 nrdB; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SRM_00154 nrdA; Ribonucleoside-diphosphate reductase large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SRM_00153 nrdB; Ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SRM_01263 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SRM_01000 Ppx/GppA phosphatase family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SRM_01634 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SRM_02036 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SRM_01454 Deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D SRM_00849 add; Adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SRM_02595 ade; Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D SRM_02083 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SRM_00674 cysN; Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SRM_00671 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:srm00240]
D SRM_01152 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SRM_01151 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SRM_01529 pyrB; Aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SRM_02424 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SRM_02601 pyrD; Dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D SRM_01494 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SRM_00955 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SRM_01945 pyrF; orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SRM_00032 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SRM_01273 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SRM_00942 yceF; Maf-like protein yceF K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D SRM_00636 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SRM_02000 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SRM_00610 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SRM_02050 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SRM_01689 nagD; N-acetylglucosamine-6-phosphate deacetylase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SRM_00599 Haloacid dehalogenase-like hydrolase, putative K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D SRM_01479 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SRM_01530 upp; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SRM_02904 pyrR; PyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SRM_01344 deoA; Thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SRM_01625 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D SRM_00377 nrdB; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SRM_00154 nrdA; Ribonucleoside-diphosphate reductase large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SRM_00153 nrdB; Ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SRM_01454 Deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D SRM_02911 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SRM_02177 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SRM_02778 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SRM_00497 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:srm00250]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_02125 nadB; Quinolinate synthetase B K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SRM_01916 ansA; Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SRM_01487 ansA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SRM_02972 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SRM_00271 Asparagine synthetase B (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SRM_00276 asnB; Asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SRM_00215 asnB; Asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SRM_01094 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SRM_02441 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SRM_02448 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SRM_02036 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SRM_00462 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SRM_01529 pyrB; Aspartate carbamoyltransferase catalytic chain K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SRM_01538 ssdA; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SRM_01352 gltD; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SRM_00586 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_02482 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_01717 pruA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SRM_00461 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SRM_01152 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SRM_01151 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SRM_00601 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SRM_01558 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SRM_01090 purF; Glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:srm00260]
D SRM_00561 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_01959 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_00867 metL; Bifunctional aspartokinase/homoserine dehydrogenase II K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SRM_00378 dapG; Aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SRM_02046 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SRM_00562 thrA; bifunctional aspartokinase/homoserine K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SRM_00866 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SRM_02597 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SRM_01615 ltaE; Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D SRM_00954 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SRM_01748 ttuD; hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D SRM_02575 gpmI; Phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SRM_02205 Metalloenzyme superfamily protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SRM_02433 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SRM_00458 kbl; Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SRM_00504 Amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SRM_01446 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SRM_01817 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_02293 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D SRM_01155 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D SRM_01301 cysK; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SRM_03001 cysB; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SRM_02583 sufS; Cysteine desulfurase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SRM_01563 metB; Cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D SRM_02514 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SRM_01875 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SRM_01874 trpB2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:srm00270]
D SRM_02583 sufS; Cysteine desulfurase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SRM_01563 metB; Cystathionine gamma-synthase K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D SRM_01301 cysK; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SRM_03001 cysB; Cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D SRM_01458 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SRM_02966 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SRM_01754 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SRM_02314 conserved hypothetical protein K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SRM_02381 mtnP; 5'-methylthioadenosine phosphorylase II K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D SRM_02459 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SRM_00873 Conserved hypohtetical protein containing GAF domain K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SRM_01319 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SRM_00561 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_01959 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_00867 metL; Bifunctional aspartokinase/homoserine dehydrogenase II K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SRM_00378 dapG; Aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SRM_02046 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SRM_00562 thrA; bifunctional aspartokinase/homoserine K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SRM_00560 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D SRM_01342 cysA; Putative cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SRM_00559 met17; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SRM_02543 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_01185 cysA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SRM_00857 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SRM_01768 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SRM_02254 cysK; cysteine synthase A K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D SRM_02433 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:srm00280]
D SRM_02543 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SRM_00667 acoA_pdhA; 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SRM_02182 bkdA2; Pyruvate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_01652 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01399 thlA; Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_02473 pccB; Propionyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D SRM_02003 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SRM_02004 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01435 mvaB; Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:srm00290]
D SRM_02514 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SRM_02371 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SRM_02373 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SRM_02369 leuB; Isocitrate/isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SRM_02366 ilvB; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SRM_02367 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SRM_02368 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SRM_02374 ilvD; Dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SRM_02543 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SRM_02375 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D SRM_02370 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:srm00300]
D SRM_00562 thrA; bifunctional aspartokinase/homoserine K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SRM_00561 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_01959 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_00867 metL; Bifunctional aspartokinase/homoserine dehydrogenase II K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SRM_00378 dapG; Aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SRM_02046 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SRM_01627 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SRM_01278 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SRM_01279 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SRM_01162 dapD; Tetrahydrodipicolinate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SRM_02444 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SRM_01607 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SRM_00642 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SRM_02563 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:srm00310]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_01295 Acyl-CoA dehydrogenases K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_00132 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_01538 ssdA; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SRM_02980 conserved hypothetical protein, secreted K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D SRM_01310 kamA; lysine 2,3-aminomutase YodO family protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D SRM_00628 Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:srm00220]
D SRM_02445 argF; Ornithine carbamoyltransferase K09065 argF; N-acetylornithine carbamoyltransferase [EC:2.1.3.9]
D SRM_02441 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SRM_02448 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SRM_00842 arcA; Arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SRM_00601 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SRM_00461 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SRM_00586 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_02482 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_02446 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SRM_02443 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SRM_02444 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SRM_02447 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
D SRM_03015 argE; Acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:srm00330]
D SRM_00225 hyuA; 5-oxoprolinase K01473 hyuA; N-methylhydantoinase A [EC:3.5.2.14]
D SRM_00127 hyuB; N-methylhydantoinase (ATP-hydrolyzing) K01474 hyuB; N-methylhydantoinase B [EC:3.5.2.14]
D SRM_02138 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_00504 Amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SRM_00492 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SRM_01568 ordL; oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D SRM_01758 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SRM_00632 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D SRM_01717 pruA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SRM_01441 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SRM_01442 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_00628 Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:srm00340]
D SRM_00905 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SRM_00906 hisIE; Histidine biosynthesis bifunctional protein hisIE K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D SRM_01216 hisI; Phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D SRM_01761 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SRM_01759 hisH; Imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SRM_01762 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SRM_01757 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SRM_02352 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SRM_01536 Inositol monophosphatase family K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D SRM_02351 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SRM_00901 hutH; Phenylalanine and histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_00504 Amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SRM_02219 conserved hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:srm00350]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_02352 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SRM_01565 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SRM_02580 fahA; Fumarylacetoacetate (FAA) hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D SRM_01447 gadB; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SRM_00504 Amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SRM_00890 adh; Alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SRM_01538 ssdA; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SRM_01915 tnaA; Tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism [PATH:srm00360]
D SRM_02286 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SRM_01447 gadB; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SRM_00504 Amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SRM_01605 mmgB; Probable 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_02352 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SRM_01565 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SRM_00628 Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SRM_02625 katG; Peroxidase/catalase T K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D SRM_00492 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SRM_00607 mhpC; beta-D-galactosidase, putative K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
C 00380 Tryptophan metabolism [PATH:srm00380]
D SRM_01702 Putative cyclase superfamily K07130 kynB; arylformamidase [EC:3.5.1.9]
D SRM_01610 Conserved hypothetical protein K01556 KYNU; kynureninase [EC:3.7.1.3]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_01295 Acyl-CoA dehydrogenases K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_00132 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_01447 gadB; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SRM_00504 Amine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_00492 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SRM_02625 katG; Peroxidase/catalase T K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:srm00400]
D SRM_02705 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SRM_00574 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D SRM_02503 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SRM_00839 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SRM_00850 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SRM_02279 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SRM_01867 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SRM_01870 pabA; para-aminobenzoate synthase glutamine amidotransferase, component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SRM_01871 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SRM_01873 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SRM_01872 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SRM_01875 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SRM_01874 trpB2; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SRM_00821 pheA; Chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D SRM_01816 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SRM_02170 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_02352 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SRM_02286 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:srm00410]
D SRM_01604 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01603 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_01907 caiA; acyl-Coenzyme A oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 00430 Taurine and hypotaurine metabolism [PATH:srm00430]
D SRM_01088 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SRM_02877 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SRM_01094 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D SRM_00572 phnP; metallo-beta-lactamase superfamily protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:srm00450]
D SRM_01342 cysA; Putative cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SRM_01458 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SRM_02583 sufS; Cysteine desulfurase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SRM_01579 sufS; cysteine desulfurases, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SRM_01329 Aminotransferase, class V superfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SRM_02875 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SRM_00674 cysN; Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SRM_00671 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SRM_01755 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:srm00460]
D SRM_03061 bglX; Periplasmic beta-glucosidase [Precursor] K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SRM_01088 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SRM_02877 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SRM_01916 ansA; Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SRM_01487 ansA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SRM_02972 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SRM_00954 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:srm00470]
D SRM_00663 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SRM_00628 Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SRM_02423 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_01313 ddl; D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_00601 purQ; phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SRM_00644 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SRM_01607 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D SRM_00378 dapG; Aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
C 00480 Glutathione metabolism [PATH:srm00480]
D SRM_01088 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SRM_02877 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SRM_02105 pepN; putative metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SRM_02189 icd; Isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SRM_00084 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SRM_00083 zwf; Glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:srm00511]
D SRM_00445 chb; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SRM_02869 asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis
D SRM_00861 Ser/Thr protein phosphatase superfamily K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
C 00542 O-Antigen repeat unit biosynthesis [PATH:srm00542]
D SRM_00341 rgpG; Glycosyl transferase N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:srm00541]
D SRM_01984 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SRM_00790 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SRM_02917 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_00691 udg; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D SRM_00715 lspL; UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SRM_00802 NAD-dependent epimerase/dehydratase family K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SRM_00681 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_p84026 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_00680 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_02916 rfbB; dTDP-glucose 4-6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_p84027 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_00682 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase related K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SRM_p84025 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SRM_00683 rfbD; DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SRM_02062 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SRM_p84024 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SRM_01482 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SRM_02587 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D SRM_00658 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D SRM_00695 wecE; perosamine synthetase, putative K13010 per; perosamine synthetase [EC:2.6.1.102]
D SRM_00718 tuaD; UDP-glucose/GDP-mannose dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:srm00550]
D SRM_02067 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SRM_02408 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SRM_00646 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SRM_00644 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SRM_00642 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SRM_02423 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_01313 ddl; D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_02563 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SRM_02055 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SRM_00416 bacA; Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SRM_00643 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SRM_00862 mcpA; methyl-accepting chemotaxis protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SRM_02603 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SRM_00641 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SRM_01276 dacB; Penicillin-binding protein 4 [Precursor] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SRM_01961 dacB; D-alanyl-D-alanine carboxypeptidase [Precursor] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:srm00552]
D SRM_00416 bacA; Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SRM_00341 rgpG; Glycosyl transferase N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:srm00543]
D SRM_01198 rfaG; glycosyl transferase, group 1 K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
D SRM_00341 rgpG; Glycosyl transferase N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:srm00730]
D SRM_01428 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SRM_01711 Conserved hypothetical protein K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SRM_02066 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SRM_01423 D-aminoacid oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D SRM_01426 thiG; Thiazole biosynthesis protein thiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SRM_01427 thiE; Thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SRM_01750 thiE; Thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SRM_02644 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D SRM_01298 Predicted GTPases K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SRM_02672 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_00298 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_02083 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SRM_00411 tenA; putative Transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:srm00740]
D SRM_01710 riboflavin-specific deaminase/GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SRM_00013 ribA; Riboflavin biosynthesis protein ribA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SRM_02528 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SRM_01268 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SRM_02529 ribC; Riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SRM_01987 ribF; Riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SRM_02336 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:srm00750]
D SRM_00630 pdxH; Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SRM_01614 pdxH; Pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D SRM_02299 pdxB; Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D SRM_02433 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SRM_02297 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D SRM_02597 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:srm00760]
D SRM_02125 nadB; Quinolinate synthetase B K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SRM_02123 nadA; Quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SRM_02124 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SRM_00427 pncB; Nicotinic acid phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SRM_02355 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SRM_00868 punA; Purine nucleoside phosphorylase I K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SRM_02050 surE; 5'-nucleotidase surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D SRM_01689 nagD; N-acetylglucosamine-6-phosphate deacetylase NagD K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D SRM_02289 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SRM_00481 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D SRM_01648 pncA; Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D SRM_02790 npdA; NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SRM_01811 ppnK; Probable inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SRM_02431 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SRM_02432 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D SRM_02430 pntB; NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D SRM_01538 ssdA; Succinate-semialdehyde dehydrogenase [NADP+] K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:srm00770]
D SRM_02366 ilvB; Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SRM_02367 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SRM_02368 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SRM_02374 ilvD; Dihydroxyacid dehydratase/phosphogluconate dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SRM_02051 panB; 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SRM_01603 panC; Pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SRM_00611 Putative transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D SRM_01322 GHMP kinases putative ATP-binding protein K06982 pok; pantoate kinase [EC:2.7.1.169]
D SRM_00027 coaBC; Coenzyme A biosynthesis bifunctional protein coaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SRM_02294 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SRM_03008 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SRM_01307 hetI; Phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D SRM_02543 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SRM_01604 panD; Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:srm00780]
D SRM_02949 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SRM_02964 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SRM_01333 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_01141 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00043 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00912 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_02896 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00615 fab1; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SRM_00597 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SRM_00933 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D SRM_00612 birA; Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:srm00785]
D SRM_02771 lipB; Lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SRM_00974 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SRM_00313 lplA; Lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_02187 pdhA; Pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SRM_02186 pdhB; pyruvate dehydrogenase complex, E1 component K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SRM_02185 pdhC; pyruvate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SRM_00990 sucB; Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SRM_01356 odhA; 2-oxoglutarate dehydrogenase E1 component K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D SRM_00667 acoA_pdhA; 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SRM_02182 bkdA2; Pyruvate dehydrogenase beta subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D SRM_01446 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D SRM_01817 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SRM_02293 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:srm00790]
D SRM_03011 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SRM_02672 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_00298 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_02666 phoD; Alkaline phosphatase D [Precursor] K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SRM_00347 Conserved hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SRM_02096 hydrolase, NUDIX family protein K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D SRM_00940 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SRM_01147 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SRM_02162 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SRM_00491 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SRM_02638 folC; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SRM_01710 riboflavin-specific deaminase/GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SRM_00013 ribA; Riboflavin biosynthesis protein ribA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SRM_01889 pabB; Para-aminobenzoate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SRM_03010 6-pyruvoyl-tetrahydropterin synthase homolog K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SRM_01708 ygcM; Putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SRM_01639 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D SRM_02286 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D SRM_01349 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 00670 One carbon pool by folate [PATH:srm00670]
D SRM_00491 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SRM_02047 folD; FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SRM_00954 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SRM_01840 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SRM_01841 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SRM_02392 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SRM_01817 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SRM_00497 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SRM_02313 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D SRM_00441 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D SRM_01831 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:srm00860]
D SRM_02008 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SRM_01753 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SRM_01952 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SRM_01211 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SRM_01752 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SRM_01751 hemD; Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SRM_01908 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SRM_01955 hemF; Coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D SRM_00922 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D SRM_01404 hemG; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D SRM_02906 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SRM_01954 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SRM_02589 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SRM_02588 ctaA; Cytochrome aa3-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SRM_02545 chlI; Magnesium-chelatase subunit chlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:srm00130]
D SRM_01002 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SRM_01544 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D SRM_01545 menD; Menaquinone biosynthesis protein menD K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D SRM_01548 menC; O-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D SRM_01549 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D SRM_02979 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D SRM_02950 Conserved hypothetical protein containing thioesterase domain K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D SRM_01547 menA; Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SRM_01825 conserved hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D SRM_01565 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:srm00900]
D SRM_02057 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D SRM_01853 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D SRM_00865 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SRM_01852 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D SRM_00858 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D SRM_02088 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_02640 hmgA; 3-hydroxy-3-methylglutaryl coenzyme A reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D SRM_02110 idi; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SRM_02082 idsA; polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SRM_01414 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SRM_02055 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SRM_00829 htpX; Caax prenyl protease 1 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:srm00906]
D SRM_01622 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D SRM_01671 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D SRM_02276 crtI; Phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D SRM_01699 phytoene synthase-related protein K22502 crtY; lycopene beta-cyclase [EC:5.5.1.19]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:srm00907]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_01435 mvaB; Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D SRM_01652 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01399 thlA; Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SRM_00350 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D SRM_01546 putative cyclase K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:srm00523]
D SRM_00681 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_p84026 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_00680 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_02916 rfbB; dTDP-glucose 4-6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_p84027 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_00682 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase related K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SRM_p84025 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SRM_00683 rfbD; DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SRM_02062 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SRM_p84024 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D SRM_01544 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D SRM_00680 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_02916 rfbB; dTDP-glucose 4-6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_p84027 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:srm00946]
D SRM_03061 bglX; Periplasmic beta-glucosidase [Precursor] K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SRM_01887 Conserved hypothetical protein containing penicillin amidase domain K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:srm00332]
D SRM_01441 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SRM_01442 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:srm00261]
D SRM_00674 cysN; Sulfate adenylyltransferase subunit 1 K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D SRM_00671 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D SRM_00561 lysC; Aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_01959 dapG; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SRM_00867 metL; Bifunctional aspartokinase/homoserine dehydrogenase II K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D SRM_00378 dapG; Aspartate kinase K12526 lysAC; bifunctional diaminopimelate decarboxylase / aspartate kinase [EC:4.1.1.20 2.7.2.4]
D SRM_02046 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SRM_01627 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SRM_01278 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SRM_01279 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:srm00521]
D SRM_00963 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SRM_00614 suhB; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SRM_00681 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_p84026 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_00680 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_02916 rfbB; dTDP-glucose 4-6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_p84027 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_00682 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase related K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SRM_p84025 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SRM_00683 rfbD; DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SRM_02062 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SRM_p84024 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SRM_00963 glcK; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:srm00525]
D SRM_00681 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_p84026 rfbA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SRM_00680 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_02916 rfbB; dTDP-glucose 4-6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SRM_p84027 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:srm00401]
D SRM_01816 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_02352 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SRM_01867 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SRM_01870 pabA; para-aminobenzoate synthase glutamine amidotransferase, component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SRM_00041 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SRM_01333 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_01141 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00043 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00912 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_02896 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00615 fab1; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SRM_02965 acpP; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:srm00999]
D SRM_02966 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SRM_02503 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SRM_03061 bglX; Periplasmic beta-glucosidase [Precursor] K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:srm00362]
D SRM_02897 mhpC; Alpha/beta hydrolase fold K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D SRM_01652 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01399 thlA; Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D SRM_01398 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SRM_01295 Acyl-CoA dehydrogenases K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_00132 gcdH; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SRM_01605 mmgB; Probable 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:srm00627]
D SRM_00492 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SRM_02285 yccX; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation [PATH:srm00364]
D SRM_01909 clcD; carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:srm00625]
D SRM_00890 adh; Alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SRM_01649 aldH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01418 Aldehyde dehydrogenase, mitochondrial precursor K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SRM_01449 dehII; Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:srm00361]
D SRM_01909 clcD; carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D SRM_01449 dehII; Haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:srm00623]
D SRM_01909 clcD; carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:srm00633]
D SRM_01890 nemA; NADH:flavin oxidoreductases, Old Yellow Enzyme family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D SRM_01652 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SRM_01399 thlA; Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:srm00643]
D SRM_02580 fahA; Fumarylacetoacetate (FAA) hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D SRM_00492 Putative amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:srm00930]
D SRM_01456 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SRM_01651 fadJ; fatty acid oxidation complex alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:srm00626]
D SRM_00890 adh; Alcohol dehydrogenase, zinc-containing K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:srm03020]
D SRM_01971 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SRM_01970 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SRM_01261 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:srm03010]
D SRM_01999 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SRM_00034 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SRM_01242 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SRM_01260 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SRM_01253 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SRM_01560 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SRM_01250 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SRM_00035 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SRM_01234 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SRM_01259 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SRM_01230 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SRM_01258 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SRM_01249 rpsN2; Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SRM_01986 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SRM_01829 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SRM_01245 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SRM_01561 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SRM_01240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SRM_01099 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SRM_01355 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SRM_01974 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SRM_01239 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SRM_01236 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SRM_01237 rplD; 50S Ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SRM_01248 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SRM_01251 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SRM_01972 rplL; Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SRM_01562 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SRM_01973 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SRM_01975 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SRM_00036 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SRM_01246 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SRM_01254 rplO; Ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SRM_01243 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SRM_01262 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SRM_01252 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SRM_01826 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SRM_03021 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SRM_01612 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SRM_01241 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SRM_01238 rplW; Ribosomal L23 protein K02892 RP-L23; large subunit ribosomal protein L23
D SRM_01247 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SRM_00993 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SRM_01611 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SRM_00022 rpmB; 50S Ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SRM_01244 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SRM_01343 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SRM_00038 rpmF; Ribosomal L32p protein K02911 RP-L32; large subunit ribosomal protein L32
D SRM_00023 rpmG; Ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SRM_00051 rpmH; Ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SRM_03020 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D rRNA_2 rRNA_2 K01977 16SrRNA; 16S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:srm00970]
D tRNA_40 tRNA_40 K14218 tRNA-Ala; tRNA Ala
D tRNA_15 tRNA_15 K14218 tRNA-Ala; tRNA Ala
D tRNA_14 tRNA_14 K14218 tRNA-Ala; tRNA Ala
D tRNA_22 tRNA_22 K14219 tRNA-Arg; tRNA Arg
D tRNA_8 tRNA_8 K14219 tRNA-Arg; tRNA Arg
D tRNA_16 tRNA_16 K14219 tRNA-Arg; tRNA Arg
D tRNA_12 tRNA_12 K14219 tRNA-Arg; tRNA Arg
D tRNA_33 tRNA_33 K14220 tRNA-Asn; tRNA Asn
D tRNA_30 tRNA_30 K14221 tRNA-Asp; tRNA Asp
D tRNA_2 tRNA_2 K14222 tRNA-Cys; tRNA Cys
D tRNA_9 tRNA_9 K14223 tRNA-Gln; tRNA Gln
D tRNA_34 tRNA_34 K14223 tRNA-Gln; tRNA Gln
D tRNA_39 tRNA_39 K14224 tRNA-Glu; tRNA Glu
D tRNA_5 tRNA_5 K14225 tRNA-Gly; tRNA Gly
D tRNA_28 tRNA_28 K14225 tRNA-Gly; tRNA Gly
D tRNA_26 tRNA_26 K14225 tRNA-Gly; tRNA Gly
D tRNA_13 tRNA_13 K14226 tRNA-His; tRNA His
D tRNA_41 tRNA_41 K14227 tRNA-Ile; tRNA Ile
D tRNA_32 tRNA_32 K14228 tRNA-Leu; tRNA Leu
D tRNA_36 tRNA_36 K14228 tRNA-Leu; tRNA Leu
D tRNA_31 tRNA_31 K14228 tRNA-Leu; tRNA Leu
D tRNA_29 tRNA_29 K14228 tRNA-Leu; tRNA Leu
D tRNA_35 tRNA_35 K14229 tRNA-Lys; tRNA Lys
D tRNA_17 tRNA_17 K14229 tRNA-Lys; tRNA Lys
D tRNA_24 tRNA_24 K14230 tRNA-Met; tRNA Met
D tRNA_6 tRNA_6 K14230 tRNA-Met; tRNA Met
D tRNA_10 tRNA_10 K14230 tRNA-Met; tRNA Met
D tRNA_20 tRNA_20 K14231 tRNA-Phe; tRNA Phe
D tRNA_37 tRNA_37 K14232 tRNA-Pro; tRNA Pro
D tRNA_1 tRNA_1 K14232 tRNA-Pro; tRNA Pro
D tRNA_18 tRNA_18 K14232 tRNA-Pro; tRNA Pro
D tRNA_3 tRNA_3 K14233 tRNA-Ser; tRNA Ser
D tRNA_43 tRNA_43 K14233 tRNA-Ser; tRNA Ser
D tRNA_11 tRNA_11 K14233 tRNA-Ser; tRNA Ser
D tRNA_19 tRNA_19 K14233 tRNA-Ser; tRNA Ser
D tRNA_21 tRNA_21 K14234 tRNA-Thr; tRNA Thr
D tRNA_25 tRNA_25 K14234 tRNA-Thr; tRNA Thr
D tRNA_38 tRNA_38 K14234 tRNA-Thr; tRNA Thr
D tRNA_23 tRNA_23 K14235 tRNA-Trp; tRNA Trp
D tRNA_27 tRNA_27 K14236 tRNA-Tyr; tRNA Tyr
D tRNA_42 tRNA_42 K14237 tRNA-Val; tRNA Val
D tRNA_4 tRNA_4 K14237 tRNA-Val; tRNA Val
D tRNA_7 tRNA_7 K14237 tRNA-Val; tRNA Val
D SRM_02008 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SRM_00847 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SRM_02113 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SRM_01472 Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SRM_02007 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SRM_01742 alaS; Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SRM_02179 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SRM_02042 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SRM_02558 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SRM_03018 thrS; threonyl-tRNA synthetase, class IIa K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SRM_02063 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SRM_01212 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SRM_01755 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SRM_02392 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SRM_02259 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SRM_01126 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SRM_00532 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SRM_01097 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SRM_01180 argS; Arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SRM_02759 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SRM_01021 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SRM_03023 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SRM_03024 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SRM_01823 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SRM_01869 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:srm03060]
D SRM_01255 secY; Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SRM_02037 secF; Protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D SRM_02038 secD; Protein-export membrane protein secD K12257 secDF; SecD/SecF fusion protein
D SRM_00012 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SRM_00053 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SRM_00979 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SRM_01830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SRM_02393 ftsY; Signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor
D SRM_02639 arsA; arsenite-activated ATPase (arsA) subfamily K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D SRM_00848 tatB; Sec-independent protein translocase protein tatB homolog K03116 tatA; sec-independent protein translocase protein TatA
D SRM_00956 tatC; Sec-independent protein translocase protein tatC homolog K03118 tatC; sec-independent protein translocase protein TatC
D SRM_00485 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SRM_01181 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SRM_00482 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:srm04122]
D SRM_02066 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SRM_01185 cysA; thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D SRM_02710 trmU; Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SRM_02256 thiS; ThiamineS K03636 moaD; sulfur-carrier protein
D SRM_01124 TST; Thiosulfate sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D SRM_02257 moeB; Molybdopterin biosynthesis protein moeB K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D SRM_01349 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SRM_01425 thiS; ThiamineS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:srm03018]
D SRM_00965 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SRM_01985 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SRM_01727 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SRM_00044 deaD; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SRM_p56018 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_00373 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_01878 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_02561 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SRM_02462 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SRM_01492 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SRM_02345 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_00297 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_02654 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:srm03030]
D SRM_01633 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_01143 polC; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_00894 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_01173 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SRM_02776 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SRM_01041 dnaX; DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SRM_00580 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SRM_00003 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SRM_00025 dnaB; putative replicative DNA helicase, intein-containing K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SRM_01163 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SRM_00604 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_00895 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_01370 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SRM_02592 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SRM_01836 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SRM_01077 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SRM_02212 pol; DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
C 03410 Base excision repair [PATH:srm03410]
D SRM_02577 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SRM_02341 mutY; A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SRM_01744 alkA; DNA-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SRM_00026 dbh2; DNA polymerase-related protein,bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SRM_01836 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SRM_p56014 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_02461 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_01077 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:srm03420]
D SRM_00062 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SRM_00525 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SRM_02606 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D SRM_01341 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D SRM_01777 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D SRM_p56012 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00621 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00593 uvrD; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00897 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_02541 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_01836 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SRM_01077 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:srm03430]
D SRM_01808 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SRM_00825 mutS2; DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SRM_01919 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D SRM_p56012 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00621 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00593 uvrD; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00897 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_02541 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00914 xseA; Probable exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SRM_00911 xseB; Probable exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SRM_p56014 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_02461 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_00604 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_00895 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_01173 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SRM_00003 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SRM_02776 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SRM_00580 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SRM_01041 dnaX; DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SRM_01633 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_01143 polC; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_00894 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_01077 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:srm03440]
D SRM_p56014 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_02461 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_00604 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_00895 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_00068 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D SRM_01362 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SRM_02774 recR; Recombination protein recR K06187 recR; recombination protein RecR
D SRM_01730 recA; RecA protein K03553 recA; recombination protein RecA
D SRM_01836 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SRM_00534 ruvA; Holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D SRM_01326 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SRM_02885 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SRM_00344 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SRM_01173 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SRM_00003 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SRM_02776 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SRM_00580 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SRM_01041 dnaX; DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SRM_01633 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_01143 polC; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_00894 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_02956 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:srm02010]
D SRM_02620 fbpA; Iron(III)-binding periplasmic protein [Precursor] K02012 afuA; iron(III) transport system substrate-binding protein
D SRM_02619 fbpB; Ferric transport system permease protein fbpB K02011 afuB; iron(III) transport system permease protein
D SRM_02618 fbpC; Fe(3+) ions import ATP-binding protein fbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SRM_00510 glycine betaine ABC transporter glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SRM_00511 glycine betaine ABC transporter glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SRM_00509 ABC-type proline/glycine betaine transport system, permease component K02001 proW; glycine betaine/proline transport system permease protein
D SRM_00508 ABC transporter, ATP-binding protein, proline/glycine betaine K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SRM_02692 transmembrane protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SRM_02691 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SRM_02961 ttg2D; putative periplasmic efflux protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SRM_02719 Conserved hypothetical protein containing mce domain K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SRM_00421 pqiB; putative paraquat-inducible protein B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SRM_00423 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SRM_02717 Conserved hypothetical protein, membrane, containing DUF140 domain K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SRM_00422 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SRM_02718 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SRM_01658 ugpB; ABC transporter, periplasmic substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D SRM_01661 ugpA; ABC-type sugar transport systems, permease component K17322 glpP; glycerol transport system permease protein
D SRM_01660 ugpE; ABC-type sugar transport system, permease component K17323 glpQ; glycerol transport system permease protein
D SRM_01663 sugar ABC transporter, ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D SRM_01662 malK; sugar ABC transporter, ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D SRM_02519 pstS; ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D SRM_02520 pstC; ABC-type phosphate transport system, permease component K02037 pstC; phosphate transport system permease protein
D SRM_02521 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D SRM_02522 pstB; Phosphate import ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SRM_00907 bioY; BioY protein K03523 bioY; biotin transport system substrate-specific component
D SRM_00020 lolC; Lipoprotein releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D SRM_01716 Conserved hypothetical protein containing permease domain K09808 lolC_E; lipoprotein-releasing system permease protein
D SRM_01391 ABC-type transport systems, ATPase components K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SRM_02415 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C
D SRM_02413 ccmB; Heme exporter protein B K02194 ccmB; heme exporter protein B
D SRM_00970 ABC transporter K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SRM_02305 Conserved hypothetical protein containing permease domain K07091 lptF; lipopolysaccharide export system permease protein
D SRM_01303 conserved hypothetical protein, membrane K11720 lptG; lipopolysaccharide export system permease protein
D SRM_01557 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SRM_00369 znuC; ABC transporter, nucleotide binding/ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SRM_00389 Hypothetical protein, membrane K19341 nosY; Cu-processing system permease protein
D SRM_00387 nosF; ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D SRM_02169 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D SRM_01204 ftsE; Cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D SRM_03053 msbA; Lipid A export ATP-binding/permease protein msbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SRM_02386 ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SRM_02384 msbA; ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:srm02060]
D SRM_02080 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SRM_02081 HPr-like protein crh K02784 ptsH; phosphocarrier protein HPr
D SRM_01019 sugar phosphotransferase system protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
C 03070 Bacterial secretion system [PATH:srm03070]
D SRM_03066 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00090 Outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00904 Putative outer membrane protein TolC K12340 tolC; outer membrane protein
D SRM_02962 tolC; Outer membrane protein tolC K12340 tolC; outer membrane protein
D SRM_01470 gspD; Probable general secretion pathway protein D [Precursor] K02453 gspD; general secretion pathway protein D
D SRM_02038 secD; Protein-export membrane protein secD K12257 secDF; SecD/SecF fusion protein
D SRM_02037 secF; Protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D SRM_01255 secY; Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SRM_00012 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SRM_00053 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SRM_00979 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SRM_02393 ftsY; Signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor
D SRM_01830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SRM_00848 tatB; Sec-independent protein translocase protein tatB homolog K03116 tatA; sec-independent protein translocase protein TatA
D SRM_00956 tatC; Sec-independent protein translocase protein tatC homolog K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:srm02020]
D SRM_01049 Signal transduction histidine kinase, membrane K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SRM_02518 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SRM_02704 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SRM_02707 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SRM_02672 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_00298 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_02666 phoD; Alkaline phosphatase D [Precursor] K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SRM_00347 Conserved hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D SRM_03007 phoR; Alkaline phosphatase synthesis sensor protein phoR K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D SRM_02519 pstS; ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D SRM_01812 degP; Probable periplasmic serine protease DO-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SRM_02853 fliC; Flagellin A K02406 fliC; flagellin
D SRM_02800 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SRM_02814 motA; Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D SRM_01018 Response regulator receiver domain protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SRM_02588 ctaA; Cytochrome aa3-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SRM_01564 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SRM_00002 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SRM_00552 HTR-like protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D SRM_02263 two-component sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D SRM_01998 Malic oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SRM_00493 lytS; Sensor protein lytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SRM_03043 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D SRM_00461 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_01327 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D SRM_02825 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SRM_00414 cheB; Chemotaxis response regulator protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_p84019 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_00165 mcpA; methyl-accepting chemotaxis protein McpA K03406 mcp; methyl-accepting chemotaxis protein
D SRM_01014 mcpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02815 fixL; probable sensor protein FixL K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02817 vicK; methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02819 dcrH; Methyl-accepting chemotaxis protein DcrH K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02826 cheW; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D SRM_02822 cheA; Chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SRM_02824 cheY; Chemotaxis protein cheY homolog K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SRM_02821 cheB; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SRM_01036 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K11443 divK; two-component system, cell cycle response regulator DivK
D SRM_01300 Signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D SRM_00855 fixL; Sensor protein fixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SRM_02841 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC
D SRM_02387 transcription regulator, Crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SRM_00402 ctaD; Cytochrome c oxidase subunit 1 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D SRM_03066 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00090 Outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00904 Putative outer membrane protein TolC K12340 tolC; outer membrane protein
D SRM_02962 tolC; Outer membrane protein tolC K12340 tolC; outer membrane protein
D SRM_00915 stp1; Low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SRM_02476 rpoE; RNA polymerase sigma-E factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SRM_00223 fecR; Putative anti-sigma factor K07165 fecR; transmembrane sensor
D SRM_02360 Putative Fe2+-dicitrate sensor, membrane component K07165 fecR; transmembrane sensor
D SRM_02477 Putative Fe2+-dicitrate sensor, membrane protein K07165 fecR; transmembrane sensor
D SRM_02645 Conserved hypothetical protein containing Hpt domain K20976 hptB; histidine phosphotransfer protein HptB
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:srm02024]
D SRM_01867 trpE; Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SRM_01870 pabA; para-aminobenzoate synthase glutamine amidotransferase, component ii K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SRM_02705 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SRM_01397 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_02599 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_02387 transcription regulator, Crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SRM_01710 riboflavin-specific deaminase/GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D SRM_02528 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SRM_00556 sepC; efflux pump outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D SRM_02237 lacD; Tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SRM_00053 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SRM_02038 secD; Protein-export membrane protein secD K12257 secDF; SecD/SecF fusion protein
D SRM_01255 secY; Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SRM_00012 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SRM_00979 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SRM_02393 ftsY; Signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor
D SRM_01830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:srm02030]
D SRM_00165 mcpA; methyl-accepting chemotaxis protein McpA K03406 mcp; methyl-accepting chemotaxis protein
D SRM_01014 mcpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02815 fixL; probable sensor protein FixL K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02817 vicK; methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02819 dcrH; Methyl-accepting chemotaxis protein DcrH K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02822 cheA; Chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SRM_02826 cheW; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D SRM_02824 cheY; Chemotaxis protein cheY homolog K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SRM_02821 cheB; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SRM_00414 cheB; Chemotaxis response regulator protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_p84019 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_02825 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SRM_02835 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D SRM_02811 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SRM_02810 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SRM_02814 motA; Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D SRM_02909 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D SRM_02465 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D SRM_02813 motB; Chemotaxis motB protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:srm02040]
D SRM_02837 FliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SRM_02836 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D SRM_02835 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D SRM_02834 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH
D SRM_02833 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SRM_02832 fliJ; Flagellar export FliJ K02413 fliJ; flagellar protein FliJ
D SRM_02812 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D SRM_02811 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SRM_02810 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SRM_02809 fliO; Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D SRM_02808 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SRM_02807 fliQ; Flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SRM_02806 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SRM_02804 FlhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D SRM_02805 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D SRM_02862 flgA; Flagellar protein flgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SRM_02839 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D SRM_02829 flgD; Basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D SRM_02827 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SRM_02864 flgG; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D SRM_02863 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SRM_02861 flgH; Flagellar L-ring protein [Precursor] K02393 flgH; flagellar L-ring protein FlgH
D SRM_02860 flgI; Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D SRM_02859 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SRM_02857 flgK; flagellar hook associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D SRM_02856 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SRM_02853 fliC; Flagellin A K02406 fliC; flagellin
D SRM_02844 fliD; A-type flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D SRM_02845 fliS; Flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS
D SRM_02814 motA; Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D SRM_02909 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D SRM_02465 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D SRM_02813 motB; Chemotaxis motB protein K02557 motB; chemotaxis protein MotB
D SRM_02164 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D SRM_01327 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D SRM_02841 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC
D SRM_02800 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SRM_00965 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:srm04980]
D SRM_02005 argK-probable family K07588 MMAA; GTPase [EC:3.6.5.-]
D SRM_02003 mutA; methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D SRM_02004 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:srm01501]
D SRM_00449 bglX; beta-N-acetylglucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D SRM_01380 tonB; Protein tonB K02172 blaR1; bla regulator protein blaR1
D SRM_00372 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SRM_01381 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SRM_00903 Multidrug resistance protein containing Acriflavin resistance domain K18138 acrB; multidrug efflux pump
D SRM_00556 sepC; efflux pump outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D SRM_03066 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00090 Outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00904 Putative outer membrane protein TolC K12340 tolC; outer membrane protein
D SRM_02962 tolC; Outer membrane protein tolC K12340 tolC; outer membrane protein
D SRM_00862 mcpA; methyl-accepting chemotaxis protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SRM_02603 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SRM_00641 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:srm01502]
D SRM_02423 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_01313 ddl; D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_00663 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SRM_02563 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SRM_00643 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:srm01503]
D SRM_02713 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SRM_01812 degP; Probable periplasmic serine protease DO-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SRM_00903 Multidrug resistance protein containing Acriflavin resistance domain K18138 acrB; multidrug efflux pump
D SRM_03066 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00090 Outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00904 Putative outer membrane protein TolC K12340 tolC; outer membrane protein
D SRM_02962 tolC; Outer membrane protein tolC K12340 tolC; outer membrane protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:srm01000]
C 01001 Protein kinases [BR:srm01001]
D SRM_01647 Conserved hypothetical protein containing serine/threonine protein kinase domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SRM_02902 Conserved hypothetical protein containing PASTA domain K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SRM_01552 conserved hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SRM_00245 wzc; Tyrosine-protein kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SRM_p84039 conserved hypothetical protein, transmembrane K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SRM_01049 Signal transduction histidine kinase, membrane K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SRM_03007 phoR; Alkaline phosphatase synthesis sensor protein phoR K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D SRM_01018 Response regulator receiver domain protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SRM_00150 Putative light-and oxygen-sensing transcription regulator K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SRM_00552 HTR-like protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D SRM_02263 two-component sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D SRM_00493 lytS; Sensor protein lytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SRM_02550 two-component signal transduction histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SRM_03073 lytS; Regulatory protein LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SRM_02035 vicK; Sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D SRM_02822 cheA; Chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SRM_01300 Signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D SRM_00855 fixL; Sensor protein fixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:srm01009]
D SRM_01319 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SRM_02486 potE; Na-K-Cl cotransporter, putative K10951 SLC12A2; solute carrier family 12 (sodium/potassium/chloride transporter), member 2
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:srm01002]
D SRM_00482 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SRM_02292 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SRM_01168 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SRM_00941 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SRM_01165 guaA; GMP synthase K07010 K07010; putative glutamine amidotransferase
D SRM_00107 rlpA; Rare lipoprotein A K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D SRM_00115 nlpC; Probable lipoprotein nlpC homolog [Precursor] K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SRM_01090 purF; Glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SRM_01351 gltB; Ferredoxin-dependent glutamate synthase 1 K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D SRM_01558 glmS; glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SRM_00271 Asparagine synthetase B (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SRM_00276 asnB; Asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SRM_00215 asnB; Asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D SRM_00505 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D SRM_01934 thiJ; intracellular protease I K05520 yhbO; deglycase [EC:3.5.1.124]
D SRM_00175 Conserved hypothetical protein containing CAAX amino terminal protease domain, membrane K07052 K07052; CAAX protease family protein
D SRM_02701 Conserved hypothetical protein, membrane, containing amino terminal protease K07052 K07052; CAAX protease family protein
D SRM_00311 Conserved hypothetical protein, membrane, containing protease domain K07052 K07052; CAAX protease family protein
D SRM_02105 pepN; putative metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SRM_01505 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SRM_01834 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D SRM_01833 putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D SRM_01434 zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D SRM_01112 rDP; Renal dipeptidase superfamily K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SRM_00467 microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SRM_00530 argE; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D SRM_01962 Peptidase, M20/M25/M40 family K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D SRM_01256 map; Methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SRM_02017 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SRM_01695 pepP; Putative Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SRM_00049 pepB; aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D SRM_02702 Thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D SRM_01229 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SRM_02028 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SRM_00829 htpX; Caax prenyl protease 1 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D SRM_00109 htpX; Probable protease htpX homolog K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SRM_02056 Membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SRM_01380 tonB; Protein tonB K02172 blaR1; bla regulator protein blaR1
D SRM_01609 Conserved hypothetical protein, membrane containing DUF980 K09933 mtfA; MtfA peptidase
D SRM_02147 L-aminopeptidase/D-esterase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D SRM_01812 degP; Probable periplasmic serine protease DO-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SRM_01822 prpL; Lysyl endopeptidase [Precursor] K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D SRM_01595 aprE; Subtilisin-like serine proteases K17734 aprX; serine protease AprX [EC:3.4.21.-]
D SRM_00664 Dipeptidyl peptidase IV (DPP IV) K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SRM_02977 DPP4; dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SRM_01276 dacB; Penicillin-binding protein 4 [Precursor] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SRM_01961 dacB; D-alanyl-D-alanine carboxypeptidase [Precursor] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SRM_01631 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SRM_02891 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SRM_00637 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SRM_01363 lexA2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SRM_00380 umuD; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SRM_00485 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SRM_01181 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SRM_02040 pldB; lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D SRM_02158 ctpA; carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SRM_00957 prc; Carboxy-terminal peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SRM_02463 MdsD protein, putative K08676 tri; tricorn protease [EC:3.4.21.-]
D SRM_01887 Conserved hypothetical protein containing penicillin amidase domain K01434 pac; penicillin G amidase [EC:3.5.1.11]
D SRM_02574 sppA; Protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D SRM_00860 Rhomboid-like protein K07059 K07059; rhomboid family protein
D SRM_00859 Rhomboid family protein K07059 K07059; rhomboid family protein
D SRM_01617 ldcA; Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SRM_01844 hslV; ATP-dependent protease hslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SRM_01487 ansA; L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SRM_02972 Asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D SRM_01088 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D SRM_02877 ggt; Gamma-glutamyltranspeptidase [Precursor] K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
C 01003 Glycosyltransferases [BR:srm01003]
D SRM_02188 wcaA; Glycosyl transferase, family 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D SRM_00357 Glycogen synthase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D SRM_00521 rfaG; Glycosyl transferase, group 1 K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D SRM_00969 glgA; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SRM_02143 rfaG; Glycosyl transferase group 1 K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D SRM_00862 mcpA; methyl-accepting chemotaxis protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SRM_00341 rgpG; Glycosyl transferase N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SRM_01696 conserved hypothetical protein, membrane K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D SRM_00660 otsA; Trehalose-6-phosphate synthase domain, putative K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D SRM_01198 rfaG; glycosyl transferase, group 1 K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:srm01005]
D SRM_00861 Ser/Thr protein phosphatase superfamily K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D SRM_00341 rgpG; Glycosyl transferase N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:srm01011]
D SRM_02067 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SRM_02408 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SRM_00646 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SRM_00644 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SRM_00642 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D SRM_02423 ddlA; D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_01313 ddl; D-ala D-ala ligase C-terminus superfamily K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SRM_00663 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SRM_01617 ldcA; Muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SRM_00643 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SRM_00416 bacA; Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SRM_00576 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D SRM_00862 mcpA; methyl-accepting chemotaxis protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SRM_02603 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D SRM_00641 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SRM_01276 dacB; Penicillin-binding protein 4 [Precursor] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SRM_01961 dacB; D-alanyl-D-alanine carboxypeptidase [Precursor] K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D SRM_00115 nlpC; Probable lipoprotein nlpC homolog [Precursor] K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D SRM_00107 rlpA; Rare lipoprotein A K19223 lytF; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
D SRM_00366 mltE; peptidoglycan N-acetylmuramoylhydrolase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D SRM_02762 Uncharacterized BCR, YceG family K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D SRM_02363 rlpA; Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D SRM_01489 spoIID; Stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D SRM_02713 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:srm01004]
D SRM_00041 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SRM_00040 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SRM_02949 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SRM_02964 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SRM_01333 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_01141 Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00043 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00912 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_02896 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SRM_00615 fab1; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SRM_02029 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01888 acs; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SRM_01397 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_02599 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_00039 plsX; Fatty acid/phospholipid synthesis protein plsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SRM_01673 conserved hypothetical protein, membrane K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SRM_02527 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:srm01008]
D SRM_01546 putative cyclase K05555 actIV; cyclase [EC:4.-.-.-]
C 01006 Prenyltransferases [BR:srm01006]
D SRM_02082 idsA; polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SRM_01414 ispB; Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D SRM_02055 uppS; Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SRM_01622 crtB; Phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D SRM_01671 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D SRM_01697 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SRM_01547 menA; Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SRM_02589 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:srm01007]
D SRM_02008 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SRM_02007 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SRM_01823 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SRM_01869 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SRM_01212 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SRM_01180 argS; Arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SRM_01755 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SRM_00532 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SRM_02259 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SRM_01126 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SRM_01097 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SRM_02179 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SRM_02042 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SRM_01021 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SRM_02558 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SRM_02063 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SRM_02759 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SRM_03018 thrS; threonyl-tRNA synthetase, class IIa K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SRM_01742 alaS; Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SRM_03023 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SRM_03024 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SRM_01132 aspB; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D SRM_01993 aspC; aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D SRM_01517 aspC; aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-]
D SRM_02352 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SRM_00458 kbl; Glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SRM_00597 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D SRM_00977 argD; Acetylornithine aminotransferase K03918 lat; L-lysine 6-transaminase [EC:2.6.1.36]
D SRM_02444 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SRM_01952 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SRM_00628 Aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SRM_02543 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SRM_01889 pabB; Para-aminobenzoate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D SRM_02433 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SRM_00695 wecE; perosamine synthetase, putative K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:srm00194]
D SRM_02648 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SRM_02647 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SRM_01109 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SRM_01108 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SRM_01107 atpH; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SRM_01106 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SRM_01105 atpH; ATP synthase C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SRM_01104 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SRM_01102 Hypothetical protein, membrane K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:srm03000]
D SRM_01665 araC; transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator
D SRM_02626 oxyR; Redox-sensitive transcriptional activator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D SRM_01712 purR; transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SRM_03055 rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SRM_00446 rbsR; ribose operon repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D SRM_00396 transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SRM_01719 GntR family transcriptional regulatory protein K07978 plmA; GntR family transcriptional regulator
D SRM_00557 acrR; transcriptional regulator, TetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator
D SRM_02987 acrR; transcriptional regulator protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SRM_02513 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D SRM_00089 transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D SRM_01121 Transcriptional regulator, HTH motif K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D SRM_00460 lrp; putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SRM_01473 Transcriptional regulator, MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D SRM_02913 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SRM_02387 transcription regulator, Crp family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D SRM_00390 regulatory protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D SRM_00924 Transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D SRM_00126 arsR; Bacterial regulatory protein, ArsR K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D SRM_02260 ideR; Iron dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SRM_00372 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SRM_01381 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SRM_00612 birA; Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SRM_00429 putative transcriptional regulator K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D SRM_p56016 transcriptional regulators K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D SRM_00095 Pyridine nucleotide-disulphide oxidoreductase domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D SRM_00009 Conserved hypothetical protein containing DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SRM_00595 spo0J; spoOJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SRM_00798 nusG; Transcription antitermination protein nusG K05785 rfaH; transcriptional antiterminator RfaH
D SRM_02957 putative transcriptional regulator NusG/RfaH family K05785 rfaH; transcriptional antiterminator RfaH
D SRM_02573 hrcA; Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D SRM_00411 tenA; putative Transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SRM_01832 Conserved hypothetical protein, membrane, containing PspC domain K03973 pspC; phage shock protein C
D SRM_01530 upp; Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SRM_02904 pyrR; PyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SRM_00577 Conserved hypothetical protein containing DUF179 K07735 algH; putative transcriptional regulator
D SRM_00533 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SRM_00638 mraZ; protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:srm03021]
D SRM_02156 Metallo-beta-lactamase superfamily K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D SRM_01261 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SRM_01971 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SRM_01970 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SRM_02164 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D SRM_02476 rpoE; RNA polymerase sigma-E factor K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D SRM_01327 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D SRM_02800 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SRM_01990 nusA; transcription factor K02600 nusA; transcription termination/antitermination protein NusA
D SRM_00016 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D SRM_01976 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SRM_01551 Response regulator receiver containing Stage II sporulation protein E (SpoII) domain K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D SRM_01553 spoIIAA; Anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D SRM_01552 conserved hypothetical protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SRM_00533 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SRM_01616 greA; Transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D SRM_02561 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SRM_02462 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:srm03019]
D SRM_02156 Metallo-beta-lactamase superfamily K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
D SRM_00570 rne; Ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-]
D SRM_01537 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SRM_01727 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SRM_00044 deaD; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SRM_p56018 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_00373 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_01878 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_00965 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SRM_01985 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SRM_02561 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SRM_02462 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SRM_01004 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SRM_01492 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SRM_02345 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_00297 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_02654 cca; tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D SRM_02958 hrpB; ATP-dependent helicase protein K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:srm03011]
D SRM_01999 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SRM_00034 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SRM_01242 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SRM_01260 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SRM_01253 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SRM_01560 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SRM_01250 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SRM_00035 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SRM_01234 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SRM_01259 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SRM_01230 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SRM_01258 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SRM_01249 rpsN2; Ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SRM_01986 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SRM_01829 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SRM_01245 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SRM_01561 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SRM_01240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SRM_01099 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SRM_01355 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SRM_01974 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SRM_01239 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SRM_01236 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SRM_01237 rplD; 50S Ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SRM_01248 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SRM_01251 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SRM_01562 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SRM_01973 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SRM_01975 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SRM_01972 rplL; Ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SRM_00036 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SRM_01246 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SRM_01254 rplO; Ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SRM_01243 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SRM_01262 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SRM_01252 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SRM_01826 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SRM_03021 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SRM_01612 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SRM_01241 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SRM_01238 rplW; Ribosomal L23 protein K02892 RP-L23; large subunit ribosomal protein L23
D SRM_01247 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SRM_01611 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SRM_00022 rpmB; 50S Ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SRM_01244 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SRM_01343 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SRM_00038 rpmF; Ribosomal L32p protein K02911 RP-L32; large subunit ribosomal protein L32
D SRM_00023 rpmG; Ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SRM_00051 rpmH; Ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SRM_03020 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SRM_00993 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D rRNA_2 rRNA_2 K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:srm03009]
D SRM_01537 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SRM_02298 era; GTP-binding protein K03595 era; GTPase
D SRM_01371 GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D SRM_00533 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D SRM_01990 nusA; transcription factor K02600 nusA; transcription termination/antitermination protein NusA
D SRM_00016 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D SRM_01976 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SRM_02420 ksgA; Dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SRM_01069 sun; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SRM_02295 conserved hypothetical protein containing methylase domain K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SRM_02338 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SRM_00060 gidB; Methyltransferase gidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SRM_00639 mraW; S-adenosyl-methyltransferase mraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SRM_02306 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SRM_01653 spoU; tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SRM_02350 Conserved hypothetical protein containing radical SAM domain K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SRM_01693 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SRM_01375 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SRM_01956 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SRM_01828 rimM; 16S rRNA processing protein rimM K02860 rimM; 16S rRNA processing protein RimM
D SRM_01001 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SRM_00949 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D SRM_00570 rne; Ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-]
D SRM_01265 yqgF; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SRM_00044 deaD; Cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SRM_01298 Predicted GTPases K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SRM_00418 putative GTPases K03977 engA; GTPase
D SRM_02632 hflX; GTP-binding protein hflX K03665 hflX; GTPase
D SRM_01797 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SRM_01263 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SRM_01988 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SRM_01991 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D SRM_02765 conserved hypothetical protein with DUF143 domain K09710 ybeB; ribosome-associated protein
D SRM_02311 Conserved hypothetical protein containing UPF0054 K07042 ybeY; probable rRNA maturation factor
D SRM_01534 Conserved hypothetical protein containing CRS1 / YhbY domain superfamily K07574 yhbY; RNA-binding protein
D SRM_02312 yfiA; Ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D SRM_00018 Conserved hypothetical protein containing GTP-binding site K06942 ychF; ribosome-binding ATPase
D SRM_00037 Conserved hypothetical protein containing DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:srm03016]
D SRM_02385 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SRM_01413 elaC; metallo-beta-lactamase superfamily, putative K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SRM_02008 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SRM_02759 proS; Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SRM_00532 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SRM_01126 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SRM_01755 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SRM_02007 glnS; Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D SRM_01180 argS; Arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SRM_01097 lysS; Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SRM_02179 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SRM_01742 alaS; Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SRM_02042 asnS; Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SRM_02558 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SRM_03018 thrS; threonyl-tRNA synthetase, class IIa K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SRM_02063 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SRM_01212 cysS; Cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SRM_02259 valS; Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SRM_01021 hisS; Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SRM_03023 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SRM_03024 pheT; Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SRM_01823 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SRM_01869 trpS; Tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SRM_01353 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SRM_01321 alaS; Alanyl-tRNA synthetase K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D SRM_03009 conserved hypothetical protein containing HIT-like domain K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SRM_00840 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SRM_02066 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SRM_01797 SUA5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SRM_01697 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SRM_00054 trmE; tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SRM_00059 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SRM_01520 hal2; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D SRM_00052 Conserved hypothetical protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SRM_01764 ligT; 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D SRM_02741 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SRM_02794 miaB; 2-methylthioadenine synthetase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SRM_02943 smtA; Conserved hypothetical protein, putative SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D SRM_01827 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SRM_01066 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D SRM_03036 Conserved hypothetical protein containing RNA methylase domain K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256]
D SRM_00585 spoU; Putative RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D SRM_02710 trmU; Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SRM_01583 Iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D SRM_01511 hesB; iron-sulfur cluster assembly accessory protein, putative K13628 iscA; iron-sulfur cluster assembly protein
D SRM_01854 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SRM_03010 6-pyruvoyl-tetrahydropterin synthase homolog K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SRM_01708 ygcM; Putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SRM_01918 mesJ; cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SRM_01334 Inactive homolog of metal-dependent proteases, putative molecular chaperone K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SRM_02764 gcp; Probable O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SRM_02637 Uncharacterized P-loop hydrolase UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SRM_01727 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SRM_01985 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:srm03012]
D SRM_01989 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SRM_03019 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SRM_03027 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SRM_00033 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D SRM_01233 tufA; Translation elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D SRM_01977 tuf; Translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SRM_01330 fusA; Elongation factor G K02355 fusA; elongation factor G
D SRM_01231 fusA; Translation elongation factor G (EF-G) K02355 fusA; elongation factor G
D SRM_01559 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SRM_00031 frr; Ribosome recycling factor K02838 frr; ribosome recycling factor
D SRM_02284 hemK; Protein methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SRM_00992 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SRM_01257 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SRM_01128 efp; Elongation factor P K02356 efp; elongation factor P
D SRM_01992 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D SRM_01861 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:srm03110]
D SRM_03049 clpB; Chaperone clpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SRM_01510 clpC; ATP-dependent Clp protease, ATPase subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SRM_01846 hslU; Heat shock protein HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SRM_01492 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SRM_02345 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_00297 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_02571 dnaJ; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D SRM_02572 grpE; Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D SRM_02579 hsp; Heat shock protein K13993 HSP20; HSP20 family protein
D SRM_02555 hsp; heat shock protein, class I K13993 HSP20; HSP20 family protein
D SRM_02171 Heat shock protein K13993 HSP20; HSP20 family protein
D SRM_02344 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D SRM_01046 groS; 10 kDa chaperonin, groES protein K04078 groES; chaperonin GroES
D SRM_01812 degP; Probable periplasmic serine protease DO-like K04771 degP; serine protease Do [EC:3.4.21.107]
D SRM_01229 ftsH; Cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SRM_02028 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SRM_01104 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SRM_00445 chb; Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D SRM_00558 rot; peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SRM_01608 ppiD; Putative peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D SRM_02892 prsA; Foldase protein prsA [Precursor] K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D SRM_02009 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SRM_02011 ppiD; Peptidyl-prolyl cis-trans isomerase surA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D SRM_02874 trxA; Thioredoxin K03671 TXN; thioredoxin
D SRM_02378 Thioredoxin K05838 ybbN; putative thioredoxin
D SRM_00185 dsbE; Thiol:disulfide interchange protein dsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:srm04131]
D SRM_01273 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SRM_00345 conserved hypothetical protein, membrane K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SRM_02639 arsA; arsenite-activated ATPase (arsA) subfamily K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D SRM_01388 GPD; Glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SRM_01227 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:srm04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:srm03032]
D SRM_01370 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SRM_01572 himA; Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SRM_01264 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D SRM_01564 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SRM_00002 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SRM_00025 dnaB; putative replicative DNA helicase, intein-containing K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SRM_01163 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SRM_00604 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_00895 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_01173 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SRM_00003 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SRM_00580 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SRM_01041 dnaX; DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SRM_01633 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_01143 polC; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_00894 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_02776 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SRM_02592 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SRM_01836 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SRM_01077 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SRM_02212 pol; DNA polymerase K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D SRM_02425 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SRM_01676 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SRM_01677 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SRM_02628 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SRM_01297 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:srm03036]
D SRM_01537 rnc; Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SRM_01572 himA; Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SRM_01264 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D SRM_01564 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SRM_00002 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D SRM_00408 dpsA; Nutrient stress-induced DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D SRM_01296 dpsA; Starvation induced DNA binding protein K04047 dps; starvation-inducible DNA-binding protein
D SRM_00460 lrp; putative AsnC-family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D SRM_01079 smc; Chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D SRM_01983 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SRM_01692 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SRM_00648 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA
D SRM_00964 ftsB; probable cell division protein K05589 ftsB; cell division protein FtsB
D SRM_01204 ftsE; Cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D SRM_00641 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D SRM_01819 ftsK; DNA translocase ftsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SRM_00647 ftsQ; FtsQ protein, putative K03589 ftsQ; cell division protein FtsQ
D SRM_00645 ftsW; Cell division protein K03588 ftsW; cell division protein FtsW
D SRM_02169 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D SRM_00649 ftsZ2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SRM_03026 Conserved hypothetical protein containing DUF710 K09888 zapA; cell division protein ZapA
D SRM_00540 putative ATPase K06916 zapE; cell division protein ZapE
D SRM_02713 amiB; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SRM_01842 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D SRM_01843 mreC; Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D SRM_02604 ftsW; Bacterial cell division membrane protein K05837 rodA; rod shape determining protein RodA
D SRM_p61022 parA; plasmid partitioning protein K03496 parA; chromosome partitioning protein
D SRM_p56028 parA; plasmid partition protein ParA K03496 parA; chromosome partitioning protein
D SRM_00594 soj; SpoOJ regulator protein K03496 parA; chromosome partitioning protein
D SRM_02245 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D SRM_00943 soj; Soj family protein K03496 parA; chromosome partitioning protein
D SRM_01145 soj; ParA family protein K03496 parA; chromosome partitioning protein
D SRM_p11011 parA; plasmid partition protein ParA K03496 parA; chromosome partitioning protein
D SRM_p84060 cobB; Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D SRM_00595 spo0J; spoOJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SRM_00059 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SRM_00060 gidB; Methyltransferase gidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SRM_00981 xerD; Tyrosine recombinase xerD K03733 xerC; integrase/recombinase XerC
D SRM_p61037 xerD; Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
D SRM_01704 xerD; Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
D SRM_01706 xerD; Tyrosine recombinase xerD K04763 xerD; integrase/recombinase XerD
D SRM_p84022 xerC; Phage integrase family K04763 xerD; integrase/recombinase XerD
D SRM_00999 mrp; Protein mrp homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:srm03400]
D SRM_01280 phrB; Deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SRM_02554 phrB; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SRM_01967 phrB; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D SRM_01744 alkA; DNA-3-methyladenine glycosylase II K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SRM_02341 mutY; A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SRM_02577 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SRM_00960 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SRM_02177 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SRM_02252 Deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D SRM_00026 dbh2; DNA polymerase-related protein,bacteriophage-type K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D SRM_03017 nfi; Endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D SRM_p56014 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_02461 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SRM_01077 ligA; NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SRM_01836 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SRM_00525 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SRM_02606 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D SRM_01341 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D SRM_01777 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D SRM_p56012 pcrA; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00621 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00593 uvrD; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_00897 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_02541 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SRM_01971 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SRM_01970 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SRM_01261 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SRM_00062 mfd; Transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SRM_01808 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SRM_00825 mutS2; DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D SRM_01919 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D SRM_00914 xseA; Probable exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SRM_00911 xseB; Probable exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SRM_01173 dnaE2; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SRM_00003 dnaN; DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SRM_00580 holA; DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SRM_01041 dnaX; DNA polymerase III gamma/tau subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SRM_01633 dnaQ; DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_01143 polC; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_00894 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SRM_02776 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SRM_00604 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_00895 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_01730 recA; RecA protein K03553 recA; recombination protein RecA
D SRM_00534 ruvA; Holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D SRM_01326 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SRM_02885 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D SRM_02956 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SRM_02076 sbcC; exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D SRM_00863 sbcD; Exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D SRM_02224 sbcD; DNA repair exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D SRM_02716 radA; DNA repair protein radA homolog K04485 radA; DNA repair protein RadA/Sms
D SRM_00068 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D SRM_00344 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SRM_01362 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D SRM_02774 recR; Recombination protein recR K06187 recR; recombination protein RecR
D SRM_00978 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SRM_02515 mcrA; putative helicase K19789 radD; DNA repair protein RadD
D SRM_02425 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SRM_01676 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SRM_01677 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SRM_02628 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SRM_01297 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SRM_01572 himA; Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D SRM_01264 hup; DNA-binding protein HU K05788 ihfB; integration host factor subunit beta
D SRM_p56018 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_00373 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_01878 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SRM_01738 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SRM_p56036 dinP; DNA polymerase IV, damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SRM_00381 umuC; Protein umuC K03502 umuC; DNA polymerase V
D SRM_00380 umuD; umuD protein K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D SRM_00637 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SRM_01363 lexA2; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D SRM_02357 recX; Regulatory protein RecX K03565 recX; regulatory protein
D SRM_01886 pol4; DNA polymerase IV (family X) K02347 polX; DNA polymerase (family X)
D SRM_02466 hydrolase, NUDIX family protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D SRM_00377 nrdB; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SRM_00154 nrdA; Ribonucleoside-diphosphate reductase large chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SRM_00153 nrdB; Ribonucleoside-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SRM_01202 Dhh family/dhha1 domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:srm03029]
D SRM_01989 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SRM_03019 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SRM_00033 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D SRM_01233 tufA; Translation elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D SRM_01977 tuf; Translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SRM_01330 fusA; Elongation factor G K02355 fusA; elongation factor G
D SRM_01231 fusA; Translation elongation factor G (EF-G) K02355 fusA; elongation factor G
D SRM_02298 era; GTP-binding protein K03595 era; GTPase
D SRM_01823 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SRM_01126 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SRM_02179 aspS; Aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SRM_02558 glyQS; glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SRM_01180 argS; Arginyl-tRNA synthetase, class Ic K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SRM_00847 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SRM_02113 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SRM_01472 Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SRM_00604 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_00895 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D SRM_02054 Surface antigen (D15): Surface antigen variable number K07277 SAM50; outer membrane protein insertion porin family
D SRM_01451 yaeT; Outer membrane protein assembly factor yaeT [Precursor] K07277 SAM50; outer membrane protein insertion porin family
D SRM_01492 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SRM_02572 grpE; Molecular chaperone GrpE (heat shock protein) K03687 GRPE; molecular chaperone GrpE
D SRM_02345 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_00297 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_02344 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D SRM_01046 groS; 10 kDa chaperonin, groES protein K04078 groES; chaperonin GroES
D SRM_02571 dnaJ; chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D SRM_02066 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SRM_02616 conserved hypothetical protein K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
D SRM_01455 conserved hypothetical protein K18159 NDUFAF1; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
D SRM_00999 mrp; Protein mrp homolog K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SRM_02589 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D SRM_02588 ctaA; Cytochrome aa3-controlling protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D SRM_00053 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SRM_00110 sco1; Protein sco1 K07152 SCO1; protein SCO1
D SRM_00006 SCO1/SenC family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:srm02000]
D SRM_03053 msbA; Lipid A export ATP-binding/permease protein msbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D SRM_02386 ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SRM_02384 msbA; ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SRM_01195 ABC transporter, ATP-binding/permease protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D SRM_00273 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SRM_02620 fbpA; Iron(III)-binding periplasmic protein [Precursor] K02012 afuA; iron(III) transport system substrate-binding protein
D SRM_02619 fbpB; Ferric transport system permease protein fbpB K02011 afuB; iron(III) transport system permease protein
D SRM_02618 fbpC; Fe(3+) ions import ATP-binding protein fbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SRM_00510 glycine betaine ABC transporter glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SRM_00511 glycine betaine ABC transporter glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D SRM_00509 ABC-type proline/glycine betaine transport system, permease component K02001 proW; glycine betaine/proline transport system permease protein
D SRM_00508 ABC transporter, ATP-binding protein, proline/glycine betaine K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SRM_02692 transmembrane protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SRM_02691 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SRM_01658 ugpB; ABC transporter, periplasmic substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein
D SRM_01661 ugpA; ABC-type sugar transport systems, permease component K17322 glpP; glycerol transport system permease protein
D SRM_01660 ugpE; ABC-type sugar transport system, permease component K17323 glpQ; glycerol transport system permease protein
D SRM_01663 sugar ABC transporter, ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein
D SRM_01662 malK; sugar ABC transporter, ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein
D SRM_02673 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D SRM_02674 pstB; phosphate-transporting ATPase K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D SRM_02719 Conserved hypothetical protein containing mce domain K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SRM_00421 pqiB; putative paraquat-inducible protein B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D SRM_00423 ABC transporter, permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SRM_02717 Conserved hypothetical protein, membrane, containing DUF140 domain K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D SRM_00422 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SRM_02718 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D SRM_02961 ttg2D; putative periplasmic efflux protein K07323 mlaC; phospholipid transport system substrate-binding protein
D SRM_02519 pstS; ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D SRM_02520 pstC; ABC-type phosphate transport system, permease component K02037 pstC; phosphate transport system permease protein
D SRM_02521 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D SRM_02522 pstB; Phosphate import ATP-binding protein pstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SRM_02937 btuF; Vitamin B12 binding protein [Precursor] K25132 hmuT; heme transport system substrate-binding protein
D SRM_02938 btuC; Vitamin B12 import system permease protein btuC K25133 hmuU; heme transport system permease protein
D SRM_02940 hmuV; hemin ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D SRM_01052 btuF; Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SRM_01855 iron transport system substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SRM_01416 Hemin ABC transporter, permease protein, putative K02015 ABC.FEV.P; iron complex transport system permease protein
D SRM_01485 hmuV; hemin ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SRM_00907 bioY; BioY protein K03523 bioY; biotin transport system substrate-specific component
D SRM_02305 Conserved hypothetical protein containing permease domain K07091 lptF; lipopolysaccharide export system permease protein
D SRM_01303 conserved hypothetical protein, membrane K11720 lptG; lipopolysaccharide export system permease protein
D SRM_01557 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SRM_00369 znuC; ABC transporter, nucleotide binding/ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D SRM_00389 Hypothetical protein, membrane K19341 nosY; Cu-processing system permease protein
D SRM_00387 nosF; ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D SRM_01439 probable permease of ABC transporter K25151 gldF; gliding motility-associated transport system permease protein
D SRM_01440 ccmA; ABC-type multidrug transport system, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein
D SRM_01438 conserved hypothetical protein, membrane or secreted K25153 gldG; gliding motility-associatede transport system auxiliary component
D SRM_00020 lolC; Lipoprotein releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D SRM_01716 Conserved hypothetical protein containing permease domain K09808 lolC_E; lipoprotein-releasing system permease protein
D SRM_01391 ABC-type transport systems, ATPase components K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D SRM_02415 ccmC; Heme exporter protein C K02195 ccmC; heme exporter protein C
D SRM_02413 ccmB; Heme exporter protein B K02194 ccmB; heme exporter protein B
D SRM_00970 ABC transporter K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D SRM_02169 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D SRM_01204 ftsE; Cell-division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D SRM_02889 natB; ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SRM_02591 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SRM_00206 Conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SRM_00927 ABC-2 type transport system integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SRM_01384 Conserved hypothetical protein, membrane K01992 ABC-2.P; ABC-2 type transport system permease protein
D SRM_02888 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_01385 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_02698 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_02744 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_00928 ABC transporter, ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_02590 ABC transporter, ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_00205 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_00174 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SRM_01524 Putative permease domain protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SRM_01930 ftsX; ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SRM_01932 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SRM_03067 salY; ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SRM_03068 ybjZ; ABC transporter, ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SRM_00872 Conserved hypohtetical protein, membrane, containing DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D SRM_03064 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SRM_01525 lolD; ABC transporter, lipoprotein releasing system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SRM_01931 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SRM_02429 lolD; ABC transporter, lipoprotein releasing system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SRM_01581 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SRM_02486 potE; Na-K-Cl cotransporter, putative K10951 SLC12A2; solute carrier family 12 (sodium/potassium/chloride transporter), member 2
D SRM_02926 mdtK; Multidrug resistance protein K26939 norM; MATE family, multidrug efflux pump
D SRM_01924 matE; DNA damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump
D SRM_02517 matE; MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D SRM_03062 putative sugar-transporter subfamily K08139 HXT; MFS transporter, SP family, sugar:H+ symporter
D SRM_00156 cynX; Cyanate transport protein cynX K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SRM_02534 putative multidrug resistance protein mdtG K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D SRM_02080 ptsI; Phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SRM_02081 HPr-like protein crh K02784 ptsH; phosphocarrier protein HPr
D SRM_01019 sugar phosphotransferase system protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SRM_00487 trkA; potassium channel, putative K10716 kch; voltage-gated potassium channel
D SRM_02605 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D SRM_02788 batB; aerotolerance-related membrane protein K07114 yfbK; Ca-activated chloride channel homolog
D SRM_02789 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D SRM_02421 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D SRM_01498 mscS; MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D SRM_02048 Transporter, small conductance mechanosensitive ion channel (MscS) family K03442 mscS; small conductance mechanosensitive channel
D SRM_01386 MscS Mechanosensitive ion channel, transmembrane K22044 ybiO; moderate conductance mechanosensitive channel
D SRM_02915 small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein
D SRM_02419 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D SRM_02814 motA; Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D SRM_02909 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D SRM_02465 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D SRM_02813 motB; Chemotaxis motB protein K02557 motB; chemotaxis protein MotB
D SRM_01885 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D SRM_01786 exbB; biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D SRM_01787 exbD; Putative biopolymer transport exbD protein K03559 exbD; biopolymer transport protein ExbD
D SRM_00983 corA; Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D SRM_02676 crcB1; Protein crcB homolog 1 K06199 crcB; fluoride exporter
D SRM_01116 Conserved hypothetical protein containing domain of unknown function domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SRM_00496 Phosphate-selective porin O and P K07221 oprO_P; phosphate-selective porin OprO and OprP
D SRM_02166 fadL; Long-chain fatty acid transport protein [Precursor] K06076 fadL; long-chain fatty acid transport protein
D SRM_01027 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein
D SRM_01055 btuB; Vitamin B12 transporter btuB [Precursor] K16092 btuB; vitamin B12 transporter
D SRM_02944 btuB; Vitamin B12 transporter btuB [Precursor] K16092 btuB; vitamin B12 transporter
D SRM_00436 cirA; TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D SRM_00324 cirA; TonB-dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D SRM_02936 btuB; Vitamin B12 transporter btuB [Precursor] K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SRM_02769 TonB-dependent outer membrane receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D SRM_02094 conserved hypothetical protein containing tonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D SRM_02327 conserved hypothetical protein containing TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SRM_01488 predicted TonB-dependent receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SRM_00133 cirA; ferrienterobactin-like protein containing TonB receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SRM_02539 bfeA; ferric enterobactin receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SRM_00468 cirA; TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SRM_02667 conserved hypothetical protein containing TonB receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D SRM_03040 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system
D SRM_03066 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00090 Outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00904 Putative outer membrane protein TolC K12340 tolC; outer membrane protein
D SRM_02962 tolC; Outer membrane protein tolC K12340 tolC; outer membrane protein
D SRM_00556 sepC; efflux pump outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D SRM_02054 Surface antigen (D15): Surface antigen variable number K07277 SAM50; outer membrane protein insertion porin family
D SRM_01451 yaeT; Outer membrane protein assembly factor yaeT [Precursor] K07277 SAM50; outer membrane protein insertion porin family
D SRM_02290 Conserved hypothetical protein containing tetratricopeptide repeat domain K05807 bamD; outer membrane protein assembly factor BamD
D SRM_02340 Outer membrane protein, OMP85 family protein K07278 tamA; translocation and assembly module TamA
D SRM_01450 conserved hypothetical protein containing DUF490 K09800 tamB; translocation and assembly module TamB
D SRM_01726 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D SRM_p61038 Conserved hypothetical protein containing GLUG domain K21449 ata; trimeric autotransporter adhesin
D SRM_01628 Zinc transporter ZIP K07238 TC.ZIP; zinc transporter, ZIP family
D SRM_00407 gufA; Zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D SRM_03042 acrB; Cation efflux system protein czcA K15726 czcA; heavy metal efflux system protein
D SRM_00903 Multidrug resistance protein containing Acriflavin resistance domain K18138 acrB; multidrug efflux pump
D SRM_01118 acrB; Multidrug resistance protein, putative K18989 vexF; multidrug efflux pump
D SRM_01596 putative transmembrane K+ dependent Na+/Ca+ exchanger-related K07301 yrbG; cation:H+ antiporter
D SRM_02244 Sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D SRM_02026 Na+/Ca2+-exchanging protein K07301 yrbG; cation:H+ antiporter
D SRM_01217 putP; Sodium/proline symporter K11928 putP; sodium/proline symporter
D SRM_02991 nhaC; Na(+)/H(+) antiporter K18218 tet35; tetracycline resistance efflux pump
D SRM_01523 putative potassium-efflux system protein K26730 napA; Na+:H+ antiporter
D SRM_02495 trkH1; TrkH potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D SRM_02497 trkH2; TrkH potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D SRM_02489 trkA; potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein
D SRM_02494 trkA3; Trk potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein
D SRM_02496 trkA4; Trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D SRM_00881 trkA; TRK potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein
D SRM_01038 trkA; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D SRM_02467 sul1; Sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D SRM_02639 arsA; arsenite-activated ATPase (arsA) subfamily K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D SRM_02680 ACR3; Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter
D SRM_01900 mnhA; Na(+)/H(+) antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D SRM_01899 mnhB; Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D SRM_01898 mrpC; Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D SRM_01897 mrpD; NADH-Ubiquinone/plastoquinone (complex I), various chains domain protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D SRM_01896 mrpE; Na(+)/H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D SRM_01902 mrpF; Na(+)/H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D SRM_01901 mnhG; Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D SRM_00576 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D SRM_02542 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D SRM_02781 yhgN; UPF0056 inner membrane protein yhgN K05595 marC; multiple antibiotic resistance protein
D SRM_00645 ftsW; Cell division protein K03588 ftsW; cell division protein FtsW
D SRM_00345 conserved hypothetical protein, membrane K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D SRM_02270 Conserved hypothetical protein probably involved in high-affinity fe2+ transport K07230 p19; periplasmic iron binding protein
D SRM_00590 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D SRM_02183 conserved hypothetical protein containing TonB, C-terminal domain K03832 tonB; periplasmic protein TonB
D SRM_00338 tonB; Protein TonB K03832 tonB; periplasmic protein TonB
D SRM_01566 Conserved hypothetical protein, membrane, containing TonB K03832 tonB; periplasmic protein TonB
D SRM_01150 tonB; Protein tonB K03832 tonB; periplasmic protein TonB
D SRM_p61040 tolB; TolB protein precursor K03641 tolB; TolB protein
D SRM_00991 hppA; Pyrophosphate-energized proton pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D SRM_03041 acrA; cation efflux system protein CzcB-like protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D SRM_01119 Membrane-fusion protein K18990 vexE; membrane fusion protein, multidrug efflux system
D SRM_00245 wzc; Tyrosine-protein kinase K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SRM_p84039 conserved hypothetical protein, transmembrane K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D SRM_03058 outer membrane protein, probably involved in nut rient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D SRM_02405 putative outer membrane protein probably involved in nutrient binding K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D SRM_00325 Conserved hypothetical protein, secreted K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D SRM_00331 Conserved hypothetical protein, secreted K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D SRM_00437 Conserved hypothetical protein, outer membrane, containing RagB/SusD domain K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D SRM_01221 mitochondrial benzodiazepine receptor/sensory transduction protein K05770 TSPO; translocator protein
D SRM_02364 ccmF; Cytochrome c-type biogenesis protein ccmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:srm02044]
D SRM_03066 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00090 Outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00904 Putative outer membrane protein TolC K12340 tolC; outer membrane protein
D SRM_02962 tolC; Outer membrane protein tolC K12340 tolC; outer membrane protein
D SRM_01470 gspD; Probable general secretion pathway protein D [Precursor] K02453 gspD; general secretion pathway protein D
D SRM_01463 pulE; Bacterial type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D SRM_01462 pulF; Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
D SRM_01466 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SRM_01361 conserved hypothetical protein K02237 comEA; competence protein ComEA
D SRM_00015 ComEC; DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D SRM_02804 FlhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D SRM_02805 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D SRM_02836 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D SRM_02834 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH
D SRM_02833 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SRM_02810 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SRM_02809 fliO; Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D SRM_02808 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SRM_02807 fliQ; Flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SRM_02806 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SRM_p84012 csgF; curli production assembly/transport component CsgF precursor K04338 csgF; curli production assembly/transport component CsgF
D SRM_p84013 csgG; Curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG
D SRM_00979 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SRM_02038 secD; Protein-export membrane protein secD K12257 secDF; SecD/SecF fusion protein
D SRM_02037 secF; Protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D SRM_01255 secY; Preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D SRM_01830 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SRM_02393 ftsY; Signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor
D SRM_00012 yajC; Preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SRM_00053 oxaA; Inner membrane protein oxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SRM_00848 tatB; Sec-independent protein translocase protein tatB homolog K03116 tatA; sec-independent protein translocase protein TatA
D SRM_00956 tatC; Sec-independent protein translocase protein tatC homolog K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:srm02042]
D SRM_01116 Conserved hypothetical protein containing domain of unknown function domain K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SRM_01412 Conserved hypothetical protein, membrane K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:srm02022]
D SRM_01049 Signal transduction histidine kinase, membrane K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SRM_02518 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SRM_02704 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SRM_02707 drrA; response regulator DrrA K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SRM_03007 phoR; Alkaline phosphatase synthesis sensor protein phoR K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D SRM_01018 Response regulator receiver domain protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D SRM_00150 Putative light-and oxygen-sensing transcription regulator K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SRM_00552 HTR-like protein K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D SRM_02263 two-component sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D SRM_00493 lytS; Sensor protein lytS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D SRM_02550 two-component signal transduction histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SRM_03073 lytS; Regulatory protein LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D SRM_03072 lytT; Sensory transduction protein lytT K02477 K02477; two-component system, LytTR family, response regulator
D SRM_00494 lytT; two-component system, regulatory protein K02477 K02477; two-component system, LytTR family, response regulator
D SRM_00301 lytT; Sensory transduction protein lytT K02477 K02477; two-component system, LytTR family, response regulator
D SRM_02551 lytT; LytTr DNA-binding domain family K02477 K02477; two-component system, LytTR family, response regulator
D SRM_00925 lytR; Sensory transduction protein lytR K02477 K02477; two-component system, LytTR family, response regulator
D SRM_02935 lytR; Sensory transduction protein lytR K02477 K02477; two-component system, LytTR family, response regulator
D SRM_p84028 lytT; two-component system response regulator protein K02477 K02477; two-component system, LytTR family, response regulator
D SRM_02035 vicK; Sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D SRM_02822 cheA; Chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SRM_02824 cheY; Chemotaxis protein cheY homolog K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SRM_02821 cheB; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SRM_00414 cheB; Chemotaxis response regulator protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_p84019 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_01036 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K11443 divK; two-component system, cell cycle response regulator DivK
D SRM_01300 Signal transduction histidine kinase K13587 cckA; two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
D SRM_00855 fixL; Sensor protein fixL K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3]
D SRM_02841 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC
D SRM_02645 Conserved hypothetical protein containing Hpt domain K20976 hptB; histidine phosphotransfer protein HptB
C 02035 Bacterial motility proteins [BR:srm02035]
D SRM_02822 cheA; Chemotaxis protein cheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D SRM_02826 cheW; Chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW
D SRM_02825 cheR; Chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D SRM_02821 cheB; Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D SRM_00414 cheB; Chemotaxis response regulator protein-glutamate methylesterase K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_p84019 cheB; protein-glutamate methylesterase CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D SRM_02824 cheY; Chemotaxis protein cheY homolog K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D SRM_00165 mcpA; methyl-accepting chemotaxis protein McpA K03406 mcp; methyl-accepting chemotaxis protein
D SRM_01014 mcpA; methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02815 fixL; probable sensor protein FixL K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02817 vicK; methyl-accepting chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02819 dcrH; Methyl-accepting chemotaxis protein DcrH K03406 mcp; methyl-accepting chemotaxis protein
D SRM_02834 conserved hypothetical protein K02411 fliH; flagellar assembly protein FliH
D SRM_02833 fliI; Flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D SRM_02832 fliJ; Flagellar export FliJ K02413 fliJ; flagellar protein FliJ
D SRM_02809 fliO; Flagellar biosynthesis protein fliO K02418 fliO; flagellar protein FliO/FliZ
D SRM_02808 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D SRM_02807 fliQ; Flagellar biosynthetic protein fliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D SRM_02806 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D SRM_02804 FlhA; Flagellar biosynthesis protein flhA K02400 flhA; flagellar biosynthesis protein FlhA
D SRM_02805 flhB; Flagellar biosynthetic protein flhB K02401 flhB; flagellar biosynthesis protein FlhB
D SRM_02835 fliG; Flagellar motor switch protein fliG K02410 fliG; flagellar motor switch protein FliG
D SRM_02811 fliM; Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D SRM_02810 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D SRM_02836 fliF; Flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D SRM_02860 flgI; Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D SRM_02862 flgA; Flagellar protein flgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D SRM_02861 flgH; Flagellar L-ring protein [Precursor] K02393 flgH; flagellar L-ring protein FlgH
D SRM_02812 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D SRM_02837 FliE; Flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D SRM_02839 flgC; Flagellar basal-body rod protein flgC K02388 flgC; flagellar basal-body rod protein FlgC
D SRM_02829 flgD; Basal-body rod modification protein flgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D SRM_02864 flgG; flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D SRM_02863 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D SRM_02859 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D SRM_02827 flgE; Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D SRM_02857 flgK; flagellar hook associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D SRM_02856 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D SRM_02853 fliC; Flagellin A K02406 fliC; flagellin
D SRM_02844 fliD; A-type flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D SRM_02845 fliS; Flagellar protein fliS K02422 fliS; flagellar secretion chaperone FliS
D SRM_02800 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D SRM_02814 motA; Chemotaxis motA protein K02556 motA; chemotaxis protein MotA
D SRM_02909 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D SRM_02465 motB; Motility protein B K02557 motB; chemotaxis protein MotB
D SRM_02813 motB; Chemotaxis motB protein K02557 motB; chemotaxis protein MotB
D SRM_02841 ntrC; nitrogen regulation protein NtrC K10943 flrC; two-component system, response regulator FlrC
D SRM_02803 flhF; Flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D SRM_02802 flhG; Flagellar biosynthesis switch protein K04562 flhG; flagellar biosynthesis protein FlhG
D SRM_01466 pilT; twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D SRM_01463 pulE; Bacterial type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D SRM_01462 pulF; Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:srm04812]
D SRM_01842 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D SRM_02652 conserved hypothetical protein K18640 parM; plasmid segregation protein ParM
D SRM_00649 ftsZ2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SRM_00648 ftsA; Cell division protein ftsA K03590 ftsA; cell division protein FtsA
D SRM_p61022 parA; plasmid partitioning protein K03496 parA; chromosome partitioning protein
D SRM_p56028 parA; plasmid partition protein ParA K03496 parA; chromosome partitioning protein
D SRM_00594 soj; SpoOJ regulator protein K03496 parA; chromosome partitioning protein
D SRM_02245 ATPases involved in chromosome partitioning K03496 parA; chromosome partitioning protein
D SRM_00943 soj; Soj family protein K03496 parA; chromosome partitioning protein
D SRM_01145 soj; ParA family protein K03496 parA; chromosome partitioning protein
D SRM_p11011 parA; plasmid partition protein ParA K03496 parA; chromosome partitioning protein
D SRM_p84060 cobB; Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein
D SRM_00595 spo0J; spoOJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:srm04147]
D SRM_00965 eno2; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SRM_01388 GPD; Glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SRM_01227 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SRM_01112 rDP; Renal dipeptidase superfamily K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SRM_00467 microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SRM_02345 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_00297 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SRM_01492 dnaK; Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D SRM_00664 Dipeptidyl peptidase IV (DPP IV) K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SRM_02977 DPP4; dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SRM_01694 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SRM_01233 tufA; Translation elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D SRM_01977 tuf; Translation elongation factor EF-Tu K02358 tuf; elongation factor Tu
D SRM_03009 conserved hypothetical protein containing HIT-like domain K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SRM_00857 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SRM_01397 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_02599 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SRM_01745 atoB; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SRM_01319 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D SRM_02083 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SRM_02448 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SRM_02441 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SRM_02583 sufS; Cysteine desulfurase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D SRM_01447 gadB; L-2,4-diaminobutyrate decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SRM_02580 fahA; Fumarylacetoacetate (FAA) hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D SRM_02064 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01667 fbp; Fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D SRM_01029 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SRM_01664 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SRM_00461 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SRM_01211 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SRM_01565 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D SRM_01639 Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D SRM_02672 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_00298 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_01841 purH; Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SRM_00829 htpX; Caax prenyl protease 1 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D SRM_01456 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D SRM_01803 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SRM_00586 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_02482 gdhA; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D SRM_00083 zwf; Glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SRM_02116 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:srm02048]
D SRM_p56023 hsdR; Type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D SRM_p56025 hsdS; Type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D SRM_p56026 hsdM; Type I restriction modification enzyme, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SRM_p56021 hsdM; Type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D SRM_00768 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SRM_00078 Conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SRM_01832 Conserved hypothetical protein, membrane, containing PspC domain K03973 pspC; phage shock protein C
D SRM_03033 doc; Death on curing protein K07341 doc; death on curing protein
D SRM_00797 Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D SRM_00752 Hypothetical protein containing ribbon-helix-helix K21495 fitA; antitoxin FitA
D SRM_00649 ftsZ2; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SRM_01842 mreB; cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D SRM_02008 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D SRM_02066 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors [BR:srm04030]
D SRM_02994 hop; Halorhodopsin K04642 hop; halorhodopsin
D SRM_02798 sop1; Sensory rhodopsin I K04643 sop; sensory rhodopsin
D SRM_02733 sop1; Sensory rhodopsin I (SR-I) K04643 sop; sensory rhodopsin
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:srm04090]
D SRM_00664 Dipeptidyl peptidase IV (DPP IV) K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D SRM_02977 DPP4; dipeptidyl peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:srm01504]
D SRM_02991 nhaC; Na(+)/H(+) antiporter K18218 tet35; tetracycline resistance efflux pump
D SRM_01380 tonB; Protein tonB K02172 blaR1; bla regulator protein blaR1
D SRM_00372 transcriptional regulator, BlaI/MecI/CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SRM_01381 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D SRM_00903 Multidrug resistance protein containing Acriflavin resistance domain K18138 acrB; multidrug efflux pump
D SRM_00556 sepC; efflux pump outer membrane protein K18139 oprM; outer membrane protein, multidrug efflux system
D SRM_03066 tolC; outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00090 Outer membrane efflux protein K12340 tolC; outer membrane protein
D SRM_00904 Putative outer membrane protein TolC K12340 tolC; outer membrane protein
D SRM_02962 tolC; Outer membrane protein tolC K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:srm00537]
D SRM_02672 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_00298 phoA; Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D SRM_01112 rDP; Renal dipeptidase superfamily K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D SRM_00467 microsomal dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:srm03100]
D tRNA_40 tRNA_40 K14218 tRNA-Ala; tRNA Ala
D tRNA_15 tRNA_15 K14218 tRNA-Ala; tRNA Ala
D tRNA_14 tRNA_14 K14218 tRNA-Ala; tRNA Ala
D tRNA_22 tRNA_22 K14219 tRNA-Arg; tRNA Arg
D tRNA_8 tRNA_8 K14219 tRNA-Arg; tRNA Arg
D tRNA_16 tRNA_16 K14219 tRNA-Arg; tRNA Arg
D tRNA_12 tRNA_12 K14219 tRNA-Arg; tRNA Arg
D tRNA_33 tRNA_33 K14220 tRNA-Asn; tRNA Asn
D tRNA_30 tRNA_30 K14221 tRNA-Asp; tRNA Asp
D tRNA_2 tRNA_2 K14222 tRNA-Cys; tRNA Cys
D tRNA_9 tRNA_9 K14223 tRNA-Gln; tRNA Gln
D tRNA_34 tRNA_34 K14223 tRNA-Gln; tRNA Gln
D tRNA_39 tRNA_39 K14224 tRNA-Glu; tRNA Glu
D tRNA_5 tRNA_5 K14225 tRNA-Gly; tRNA Gly
D tRNA_28 tRNA_28 K14225 tRNA-Gly; tRNA Gly
D tRNA_26 tRNA_26 K14225 tRNA-Gly; tRNA Gly
D tRNA_13 tRNA_13 K14226 tRNA-His; tRNA His
D tRNA_41 tRNA_41 K14227 tRNA-Ile; tRNA Ile
D tRNA_32 tRNA_32 K14228 tRNA-Leu; tRNA Leu
D tRNA_36 tRNA_36 K14228 tRNA-Leu; tRNA Leu
D tRNA_31 tRNA_31 K14228 tRNA-Leu; tRNA Leu
D tRNA_29 tRNA_29 K14228 tRNA-Leu; tRNA Leu
D tRNA_35 tRNA_35 K14229 tRNA-Lys; tRNA Lys
D tRNA_17 tRNA_17 K14229 tRNA-Lys; tRNA Lys
D tRNA_24 tRNA_24 K14230 tRNA-Met; tRNA Met
D tRNA_6 tRNA_6 K14230 tRNA-Met; tRNA Met
D tRNA_10 tRNA_10 K14230 tRNA-Met; tRNA Met
D tRNA_20 tRNA_20 K14231 tRNA-Phe; tRNA Phe
D tRNA_37 tRNA_37 K14232 tRNA-Pro; tRNA Pro
D tRNA_1 tRNA_1 K14232 tRNA-Pro; tRNA Pro
D tRNA_18 tRNA_18 K14232 tRNA-Pro; tRNA Pro
D tRNA_3 tRNA_3 K14233 tRNA-Ser; tRNA Ser
D tRNA_43 tRNA_43 K14233 tRNA-Ser; tRNA Ser
D tRNA_11 tRNA_11 K14233 tRNA-Ser; tRNA Ser
D tRNA_19 tRNA_19 K14233 tRNA-Ser; tRNA Ser
D tRNA_21 tRNA_21 K14234 tRNA-Thr; tRNA Thr
D tRNA_25 tRNA_25 K14234 tRNA-Thr; tRNA Thr
D tRNA_38 tRNA_38 K14234 tRNA-Thr; tRNA Thr
D tRNA_23 tRNA_23 K14235 tRNA-Trp; tRNA Trp
D tRNA_27 tRNA_27 K14236 tRNA-Tyr; tRNA Tyr
D tRNA_42 tRNA_42 K14237 tRNA-Val; tRNA Val
D tRNA_4 tRNA_4 K14237 tRNA-Val; tRNA Val
D tRNA_7 tRNA_7 K14237 tRNA-Val; tRNA Val
D rRNA_2 rRNA_2 K01977 16SrRNA; 16S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SRM_00007 short-chain dehydrogenase/reductase (SDR) family protein K11162 RDH14; retinol dehydrogenase 14 [EC:1.1.1.-]
D SRM_00526 putative Glucose/sorbosone dehydrogenases K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D SRM_01033 gfo; glucose-fructose oxidoreductase K00118 gfo; glucose-fructose oxidoreductase [EC:1.1.99.28]
D SRM_03079 conserved hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5]
D SRM_00843 trxB; Thioredoxin reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D SRM_02990 msrA; Peptide methionine sulfoxide reductase msrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SRM_01272 msrA; Peptide methionine sulfoxide reductase msrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SRM_01773 msrA; methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SRM_02989 msrA; Peptide methionine sulfoxide reductase msrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SRM_02329 msrB; Methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SRM_02027 msrAB; peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SRM_01715 bcp; Peroxiredoxin K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D SRM_01497 osmC; Peroxiredoxin osmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D SRM_01892 Pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D SRM_02436 Conserved hypothetical protein, membrane K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D SRM_00919 brp; bacteriorhodopsin related protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D SRM_00147 Retinal pigment epithelial membrane protein K10252 BCDO2; beta,beta-carotene 9',10'-dioxygenase [EC:1.13.11.71]
D SRM_02013 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SRM_02678 Low molecular weight phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D SRM_02160 pcm; protein-L-isoaspartate (D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SRM_02540 pmc; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D SRM_01006 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D SRM_02303 rfaG; Glycosyl transferase, group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D SRM_01178 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SRM_01857 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D SRM_p84001 Conserved hypothetical protein containing reverse transcriptase (RNA-dependent DNA polymerase) domain K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D SRM_02161 conserved hypothetical protein, membrane, containing DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SRM_02390 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SRM_02427 Conserved hypothetical protein, secreted K08095 CUT1_2_3; cutinase [EC:3.1.1.74]
D SRM_00633 Appr-1-p processing enzyme family protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D SRM_02379 Thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SRM_02568 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SRM_01266 conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D SRM_01720 Conserved hypothetical protein, membrane-associated HD superfamily hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D SRM_01490 tatD; TatD related DNase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SRM_02020 Putative endonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SRM_p56037 Putative nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SRM_01140 Predicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily) K01175 ybfF; esterase [EC:3.1.-.-]
D SRM_02629 Cyclomaltodextrin glucanotransferase [Precursor] K21575 susA; neopullulanase [EC:3.2.1.135]
D SRM_01483 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SRM_01323 Penicillin amidase superfamily K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D SRM_02073 nodB; Chitooligosaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D SRM_01127 Uncharacterized proteins, LmbE homolog K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D SRM_01050 Uncharacterized proteins, LmbE homolog K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D SRM_02711 Putative translation initiation inhibitor containig endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SRM_02391 ATPase family associated with various cellular activities (AAA), putative K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SRM_02012 moxR; moxR-like transcriptional regulator protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D SRM_00583 etp; Low molecular weight protein-tyrosine-phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D SRM_02032 conserved hypothetical protein containing DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D SRM_00588 Conserved hypothetical protein, containing YjeF-related protein, N-terminal domain K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D SRM_01849 paaY; carbonic anhydrase K01726 GAMMACA; gamma-carbonic anhydrase [EC:4.2.1.-]
D SRM_01459 ilvA; Threonine dehydratase biosynthetic K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D SRM_02434 fklB; Peptidyl-prolyl cis-trans isomerase, FKBP-type K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D SRM_01894 bhbA; Methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D SRM_01115 murC; UDP-N-acetylmuramate--L-alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D SRM_00404 Cation-transporting ATPase pacS K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D SRM_00415 zntA; heavy-metal transporting CPx-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D SRM_00112 zntA; Cadmium-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D SRM_00635 Inosine-5'-monophosphate dehydrogenase K04767 acuB; acetoin utilization protein AcuB
D SRM_02631 Conserved hypothetical protein containing CBS domain K04767 acuB; acetoin utilization protein AcuB
D SRM_02566 acuC; acetoin utilization protein acuC K04768 acuC; acetoin utilization protein AcuC
D SRM_02354 conserved hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D SRM_00315 fer; Putative ferredoxin K05337 fer; ferredoxin
D SRM_01798 Conserved hypothetical protein containing 3Fe-4S ferredoxin domain K05337 fer; ferredoxin
D SRM_01325 fdxA; Ferredoxin-1 K05524 fdxA; ferredoxin
D SRM_00317 fdxA; Ferredoxin K05524 fdxA; ferredoxin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D SRM_01575 conserved hypothetical protein containing Glyoxalase/bleomycin resistance protein/dioxygenase K08234 yaeR; glyoxylase I family protein
D SRM_00870 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D SRM_02091 conserved hypothetical protein, membrane K07027 K07027; glycosyltransferase 2 family protein
D SRM_01767 conserved hypothetical protein, membrane K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D SRM_02901 ubiB; Ubiquinone biosynthesis protein ubiB K03688 ubiB; ubiquinone biosynthesis protein
D SRM_01774 mtrF; efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D SRM_02951 glyoxalase family protein K15975 K15975; glyoxalase family protein
D SRM_03084 gloA; Lactoylglutathione lyase K15975 K15975; glyoxalase family protein
D SRM_00503 Conserved hypothetical protein, membrane, containing DoxD domain K15977 K15977; putative oxidoreductase
D SRM_00047 Conserved hypothetical protein containing DoxD domain, membrane K15977 K15977; putative oxidoreductase
D SRM_00489 Conserved hypothetical protein, membrane, containing DoxX domain K15977 K15977; putative oxidoreductase
D SRM_02675 conserved hypothetical protein, membrane K15977 K15977; putative oxidoreductase
D SRM_02952 estA; Phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D SRM_02346 lcfA; Acyl-CoA synthetase (NDP forming) K09181 yfiQ; acetyltransferase
D SRM_01691 conserved hypothetical protein containing DUF1094 K26958 brxA_B; bacilliredoxin
D SRM_01504 general stress protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SRM_02310 cspD; putative cold shock-like protein K03704 cspA; cold shock protein
D SRM_01159 cspC; 'Cold-shock' DNA-binding domain K03704 cspA; cold shock protein
D SRM_01939 csp; cold shock-like protein K03704 cspA; cold shock protein
D SRM_02671 cspC; Cold shock-like protein cspC K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D SRM_01157 clpS; ATP-dependent Clp protease adaptor protein clpS, putative K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D SRM_02890 tig; Trigger factor K03545 tig; trigger factor
D SRM_01824 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D SRM_01788 chlI; magnesium chelatase subunit ChlI K07391 comM; magnesium chelatase family protein
D SRM_01410 conserved hypothetical protein containing OsmC domain K07397 yhfA; putative redox protein
D SRM_02506 predicted redox protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D SRM_02407 Conserved hypothetical protein containing methylated-DNA-[protein]-cysteine S-methyltransferase domain K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D SRM_02402 adaB; Methylated-DNA--protein-cysteinemethyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D SRM_02560 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SRM_02031 conserved hypothetical protein containing DUF102 K07460 yraN; putative endonuclease
D SRM_01372 smf; SMF protein K04096 smf; DNA processing protein
D SRM_01184 ATPase, AAA family protein K07478 ycaJ; putative ATPase
D SRM_p11002 conserved hypothetical protein containing phage/plasmid primase P4, C-terminal domain K06919 K06919; putative DNA primase/helicase
D SRM_p61008 Conserved hypothetical protein containing Polynucleotidyl transferase, Ribonuclease H fold domain K07501 K07501; 3'-5' exonuclease
D SRM_00774 Insertion element K07480 insB; insertion element IS1 protein InsB
D SRM_00303 insB; Transposase K07480 insB; insertion element IS1 protein InsB
D SRM_00759 Transposase and inactivated derivatives, IS1 family K07480 insB; insertion element IS1 protein InsB
D SRM_02852 insB; transposase insB K07480 insB; insertion element IS1 protein InsB
D SRM_p84010 insB; ISSru3, transposase insB K07480 insB; insertion element IS1 protein InsB
D SRM_p84069 insB; putative Transposase K07480 insB; insertion element IS1 protein InsB
D SRM_00208 Transposase K07483 K07483; transposase
D SRM_p61002 tnp; Transposase K07485 K07485; transposase
D SRM_00751 transposase K07486 K07486; transposase
D SRM_01491 Transposase IS110 family K07486 K07486; transposase
D SRM_02986 Transposase IS110 family K07486 K07486; transposase
D SRM_00810 Transposase IS200 like K07491 rayT; REP-associated tyrosine transposase
D SRM_00750 putative transposase K07491 rayT; REP-associated tyrosine transposase
D SRM_00243 Transposase K07496 K07496; putative transposase
D SRM_00296 Transposase K07496 K07496; putative transposase
D SRM_00811 Probable transposase K07496 K07496; putative transposase
D SRM_00230 Transposase K07496 K07496; putative transposase
D SRM_00627 transposase K07496 K07496; putative transposase
D SRM_00749 IS605 family transposase orfB K07496 K07496; putative transposase
D SRM_00832 Transposase K07496 K07496; putative transposase
D SRM_01317 Putative transposase K07496 K07496; putative transposase
D SRM_00209 Putative Transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SRM_01345 conserved hypothetical protein K03969 pspA; phage shock protein A
D SRM_02221 conserved hypothetical protein K07504 K07504; predicted type IV restriction endonuclease
D SRM_02775 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D SRM_01365 phrB; Deoxyribodipyrimidine photo-lyase K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SRM_02538 lysP; amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SRM_02487 cat2; cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SRM_02490 cat3; cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SRM_02501 cat5; cationic amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SRM_01220 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SRM_01367 acrF; acriflavine resistance protein (cation efflux system) K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D SRM_02178 Proton/peptide symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SRM_00352 Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SRM_00434 dhlC; Sodium/glucose cotransporter 2 K03307 TC.SSS; solute:Na+ symporter, SSS family
D SRM_03056 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SRM_02216 putP; Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SRM_00448 putP; Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SRM_00451 Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SRM_02993 putP; sodium:proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D SRM_00945 sodium-and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D SRM_01091 Sodium-and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D SRM_01092 Sodium-and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D SRM_01478 Sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SRM_00619 nupC; Nucleoside permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D SRM_00921 Conserved hypothetical protein containing DUF542 K07322 ytfE; regulator of cell morphogenesis and NO signaling
D SRM_01958 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D SRM_01960 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D SRM_00697 spsF; Spore coat polysaccharide biosynthesis protein spsF K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D SRM_01802 Peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D SRM_00179 Conserved hypothetical protein K03607 proQ; ProP effector
D SRM_00541 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D SRM_01606 phoH; PhoH-lihe protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SRM_01766 lolA; outer membrane lipoprotein carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D SRM_02053 ompH; Outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D SRM_03065 emrA; membrane fusion efflux protein, putative K02005 ABC.CD.TX; HlyD family secretion protein
D SRM_01929 ABC transporter permease K02005 ABC.CD.TX; HlyD family secretion protein
D SRM_01368 mdtA; Multidrug transporter mdtA K02005 ABC.CD.TX; HlyD family secretion protein
D SRM_02417 ccmE; Heme exporter protein E K02197 ccmE; cytochrome c-type biogenesis protein CcmE
C 99994 Others
D SRM_02523 phoU; Phosphate uptake regulator K02039 phoU; phosphate transport system protein
D SRM_00520 phoU; phosphate transport system K02039 phoU; phosphate transport system protein
D SRM_00500 Protein apaG K06195 apaG; ApaG protein
D SRM_00386 nosD; Nitrous oxidase accessory protein K07218 nosD; nitrous oxidase accessory protein
D SRM_02941 hemS; Hemin transport protein K07225 hmuS; putative hemin transport protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SRM_02078 cvpA; Conserved hypothetical protein, membrane, containing colicin V production domain K03558 cvpA; membrane protein required for colicin V production
D SRM_00490 rssA; phospholipase, patatin family K07001 K07001; NTE family protein
D SRM_02900 rssA; Predicted esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D SRM_00196 Conserved hypothetical protein containing hydrolase domain K07025 K07025; putative hydrolase of the HAD superfamily
D SRM_01582 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SRM_01580 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D SRM_p56005 Membrane protein containing bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D SRM_01500 Predicted membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D SRM_01452 yihY; YihY family protein K07058 K07058; membrane protein
D SRM_02014 fxsA; FxsA cytoplasmic membrane protein K07113 fxsA; UPF0716 protein FxsA
D SRM_01578 sufE; Probable cysteine desulfuration protein sufE K02426 sufE; cysteine desulfuration protein SufE
D SRM_02464 HAD superfamily (subfamily IA) hydrolase K11777 K11777; HAD superfamily phosphatase
D SRM_00104 lemA; LemA protein K03744 lemA; LemA protein
D SRM_02910 conserved hypothetical protein, membrane, containing DUF368 K08974 K08974; putative membrane protein
D SRM_00837 Conserved hypohtetical protein containing bacterial membrane flanked domain K08981 K08981; putative membrane protein
D SRM_00883 Conserved hypohtetical protein, membrane K08983 K08983; putative membrane protein
D SRM_01574 Conserved hypothetical protein, membrane, containing DUF477 K08988 K08988; putative membrane protein
C 99997 Function unknown
D SRM_02624 Conserved hypothetical protein containing ankyrin repeat K06867 K06867; uncharacterized protein
D SRM_00105 Conserved hypothetical protein, membrane, containing DUF477 K06872 K06872; uncharacterized protein
D SRM_01912 phosphohydrolase K06885 K06885; uncharacterized protein
D SRM_01746 conserved hypothetical protein K06888 K06888; uncharacterized protein
D SRM_02933 Conserved hypothetical protein containing hydrolase domain K06889 K06889; uncharacterized protein
D SRM_00061 conserved hypothetical protein, secreted K06889 K06889; uncharacterized protein
D SRM_01848 conserved hypothetical protein, secreted K06889 K06889; uncharacterized protein
D SRM_01125 CoA-binding protein K06929 K06929; uncharacterized protein
D SRM_02893 Conserved hypothetical protein containing HD domain K06950 K06950; uncharacterized protein
D SRM_00071 similar to exporters of the RND superfamily K07003 K07003; uncharacterized protein
D SRM_02460 Conserved hypothetical protein containing hydrolase domain K07019 K07019; uncharacterized protein
D SRM_01650 conserved hypothetical protein K07028 K07028; uncharacterized protein
D SRM_00812 hypothetical protein K07064 K07064; uncharacterized protein
D SRM_00777 conserved hypothetical protein K07065 K07065; uncharacterized protein
D SRM_00902 conserved hypothetical protein K07071 K07071; uncharacterized protein
D SRM_00726 conserved hypothetical protein K07075 K07075; uncharacterized protein
D SRM_00813 Conserved hypothetical protein containing nucleotidyltransferase domain K07075 K07075; uncharacterized protein
D SRM_00406 Predicted permease K07090 K07090; uncharacterized protein
D SRM_02152 putative phosphoesterase K07095 K07095; uncharacterized protein
D SRM_00413 Ser/Thr protein phosphatase family protein K07096 K07096; uncharacterized protein
D SRM_02334 hypothetical protein K07164 K07164; uncharacterized protein
D SRM_01215 conserved hypothetical protein K08998 K08998; uncharacterized protein
D SRM_02353 Uncharacterized ACR K08999 K08999; uncharacterized protein
D SRM_00410 Conserved hypothetical protein containing DUF1791 K09004 K09004; uncharacterized protein
D SRM_01585 Conserved hypothetical protein, secreted protein containing DUF192 K09005 K09005; uncharacterized protein
D SRM_01586 Conserved hypothetical protein containing DUF192 K09005 K09005; uncharacterized protein
D SRM_02079 Conserved hypothetical protein, containing GatB/Yqey domain superfamily K09117 K09117; uncharacterized protein
D SRM_02453 Conserved hypohtetical protein containing UPF0182 domain K09118 K09118; uncharacterized protein
D SRM_01432 conserved hypothetical protein K09158 K09158; uncharacterized protein
D SRM_01332 conserved hypothetical protein containing DUF1684 K09164 K09164; uncharacterized protein
D SRM_02165 conserved hypothetical protein K09166 K09166; uncharacterized protein
D SRM_00838 conserved hypothetical protein, membrane K09167 K09167; uncharacterized protein
D SRM_p56029 conserved hypothetical protein containing DUF497 K09803 K09803; uncharacterized protein
D SRM_02041 conserved hypothetical protein, secreted, containing DUF541 K09807 K09807; uncharacterized protein
D SRM_02272 conserved hypothetical protein K09822 K09822; uncharacterized protein
D SRM_00420 Conserved hypothetical protein containing DUF330 domain K09857 K09857; uncharacterized protein
D SRM_00609 conserved hypothetical protein containig DUF328 K09861 K09861; uncharacterized protein
D SRM_02065 conserved hypothetical protein K09931 K09931; uncharacterized protein
D SRM_02330 conserved hypothetical protein K09966 K09966; uncharacterized protein
D SRM_00151 Conserved hypothetical protein containing GumN domain K09973 K09973; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024