+D GENES KO
#
KEGG Orthology (KO) - Streptococcus thermophilus MN-ZLW-002
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:stw00010]
D Y1U_C0695 glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Y1U_C0183 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Y1U_C1796 Fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Y1U_C0470 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Y1U_C1676 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Y1U_C1670 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Y1U_C1108 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Y1U_C0609 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Y1U_C1099 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Y1U_C0871 acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Y1U_C0872 acetoin dehydrogenase complex, E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Y1U_C0873 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C1197 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C0619 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C0988 Alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Y1U_C1307 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Y1U_C1071 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Y1U_C1178 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D Y1U_C0181 Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:stw00020]
D Y1U_C1183 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Y1U_C1184 Aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Y1U_C1182 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C0871 acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Y1U_C0872 acetoin dehydrogenase complex, E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Y1U_C0873 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:stw00030]
D Y1U_C0183 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Y1U_C1685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Y1U_C0294 Transketolase, putative K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Y1U_C0806 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Y1U_C1048 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Y1U_C0807 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Y1U_C1071 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Y1U_C1360 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Y1U_C0024 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Y1U_C1178 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D Y1U_C1796 Fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:stw00040]
D Y1U_C1720 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Y1U_C1685 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:stw00051]
D Y1U_C1623 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Y1U_C1622 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Y1U_C0390 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Y1U_C1796 Fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Y1U_C0470 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Y1U_C0392 Phosphotransferase system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Y1U_C0317 Phosphotransferase system, mannose/fructose-specific component IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Y1U_C0316 Mannose-specific phosphotransferase system component IIC low K02795 manY; mannose PTS system EIIC component
D Y1U_C0315 IIDman K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:stw00052]
D Y1U_C1307 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Y1U_C1310 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Y1U_C1309 Galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Y1U_C1308 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C1272 UDP-glucose 4-epimerase, putative K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C0761 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C1720 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Y1U_C1071 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Y1U_C0695 glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Y1U_C1305 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Y1U_C0822 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Y1U_C1625 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:stw00500]
D Y1U_C1624 sucrose PTS component II K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Y1U_C1625 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Y1U_C1720 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Y1U_C1268 PTS cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D Y1U_C0886 Phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Y1U_C1435 cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Y1U_C0138 1,6-alpha-glucanhydrolase (dextranase) K05988 dexA; dextranase [EC:3.2.1.11]
D Y1U_C0885 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Y1U_C0181 Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Y1U_C0180 Glucose-specific phosphotransferase enzyme IIA component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D Y1U_C0182 Metal-dependent hydrolase K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D Y1U_C1071 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Y1U_C0695 glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Y1U_C0183 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Y1U_C1623 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:stw00520]
D Y1U_C0181 Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Y1U_C0483 N-acetylglucosamine 6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Y1U_C0517 Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D Y1U_C1623 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Y1U_C0998 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Y1U_C1167 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Y1U_C0538 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Y1U_C1454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Y1U_C0763 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Y1U_C1432 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Y1U_C0695 glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Y1U_C1071 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Y1U_C1720 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Y1U_C1310 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Y1U_C1309 Galactose-1-phosphate uridyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Y1U_C1308 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C1272 UDP-glucose 4-epimerase, putative K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C0761 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C0822 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Y1U_C0317 Phosphotransferase system, mannose/fructose-specific component IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Y1U_C0316 Mannose-specific phosphotransferase system component IIC low K02795 manY; mannose PTS system EIIC component
D Y1U_C0315 IIDman K02796 manZ; mannose PTS system EIID component
D Y1U_C0183 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Y1U_C1622 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:stw00620]
D Y1U_C0871 acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Y1U_C0872 acetoin dehydrogenase complex, E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Y1U_C0873 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C1552 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Y1U_C0988 Alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D Y1U_C1742 Acetate kinase, putative K00925 ackA; acetate kinase [EC:2.7.2.1]
D Y1U_C1355 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Y1U_C1099 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Y1U_C0377 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Y1U_C0373 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Y1U_C0375 biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Y1U_C0376 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Y1U_C0235 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Y1U_C1197 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C0619 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C1427 glyoxalase I/lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Y1U_C1042 metallo-beta-lactamase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Y1U_C0687 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Y1U_C1106 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:stw00630]
D Y1U_C1183 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Y1U_C1184 Aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Y1U_C0945 Phosphatase, putative K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Y1U_C1664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Y1U_C0721 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:stw00640]
D Y1U_C1742 Acetate kinase, putative K00925 ackA; acetate kinase [EC:2.7.2.1]
D Y1U_C1355 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C1552 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Y1U_C0377 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Y1U_C0373 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Y1U_C0375 biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Y1U_C0376 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Y1U_C1197 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C0619 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:stw00650]
D Y1U_C1552 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Y1U_C0554 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D Y1U_C0958 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1758 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1757 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Y1U_C0967 (R,R)-butanediol dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:stw00660]
D Y1U_C0958 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1758 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1757 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Y1U_C1104 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Y1U_C1103 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Y1U_C1105 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:stw00562]
D Y1U_C0900 fructose-1 6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Y1U_C0470 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:stw00190]
D Y1U_C0464 ATP synthase F0F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Y1U_C0466 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Y1U_C0465 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Y1U_C0463 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Y1U_C0467 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Y1U_C0461 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Y1U_C0462 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Y1U_C0460 ATP synthase F0 sector subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Y1U_C0357 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:stw00680]
D Y1U_C0721 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Y1U_C0609 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Y1U_C0687 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Y1U_C1796 Fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Y1U_C1742 Acetate kinase, putative K00925 ackA; acetate kinase [EC:2.7.2.1]
D Y1U_C1355 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Y1U_C1108 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Y1U_C1422 D-3-phosphoglycerate dehydrogenase, putative K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Y1U_C1424 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Y1U_C1413 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:stw00910]
D Y1U_C0412 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Y1U_C1664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Y1U_C1708 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D Y1U_C1553 carbonate dehydratase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:stw00920]
D Y1U_C0714 Phosphoesterase, DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Y1U_C0076 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Y1U_C1014 serine acetyltransferase (SAT) K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Y1U_C0352 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Y1U_C1016 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Y1U_C1125 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Y1U_C0337 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:stw00061]
D Y1U_C0377 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Y1U_C0373 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Y1U_C0375 biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Y1U_C0376 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Y1U_C0029 acyl carrier protein K02078 acpP; acyl carrier protein
D Y1U_C0368 acyl carrier protein K02078 acpP; acyl carrier protein
D Y1U_C0370 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Y1U_C0367 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Y1U_C0372 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Y1U_C0371 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Y1U_C0374 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Y1U_C0369 Putative trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Y1U_C0365 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D Y1U_C0988 Alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:stw00561]
D Y1U_C0028 glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Y1U_C0564 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Y1U_C1457 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Y1U_C1447 Sphingosine kinase and enzyme eukaryotic diacylglycerol kinase-like protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Y1U_C0546 glycosyl transferase family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Y1U_C0545 glycosyl transferase, family 1 K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D Y1U_C0611 phosphoglycerol transferase/alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:stw00564]
D Y1U_C1719 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Y1U_C0564 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Y1U_C1457 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Y1U_C1447 Sphingosine kinase and enzyme eukaryotic diacylglycerol kinase-like protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Y1U_C0187 Phosphatidate cytidylyltransferase (CDP-diglyceride synthase) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Y1U_C1896 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Y1U_C1218 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase enzyme-like protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D Y1U_C1305 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:stw00230]
D Y1U_C0539 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Y1U_C0807 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Y1U_C1071 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Y1U_C1360 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Y1U_C0024 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Y1U_C0032 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Y1U_C0040 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Y1U_C0034 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Y1U_C0031 phosphoribosylformylglycinamidine synthase II (FGAM synthetase) K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Y1U_C0033 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Y1U_C0042 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Y1U_C0041 Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Y1U_C0030 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Y1U_C0045 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Y1U_C0035 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Y1U_C1126 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Y1U_C0808 Purine nucleoside phosphorylase (Family 2) K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Y1U_C0812 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Y1U_C0012 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Y1U_C1902 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Y1U_C0969 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Y1U_C0245 Nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Y1U_C1253 Xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Y1U_C0986 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Y1U_C0811 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Y1U_C1334 Guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Y1U_C1187 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Y1U_C1188 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Y1U_C1856 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Y1U_C0135 GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Y1U_C1358 RelA_SpoT domain-containing protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D Y1U_C1835 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Y1U_C0716 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D Y1U_C0131 cyclo-nucleotide phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Y1U_C1808 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Y1U_C0269 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Y1U_C0268 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Y1U_C0267 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:stw00240]
D Y1U_C0504 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Y1U_C0503 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Y1U_C0502 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Y1U_C0867 Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Y1U_C0931 Dihydroorotate dehydrogenase B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Y1U_C0932 Dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Y1U_C1109 Dihydroorotate dehydrogenase A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D Y1U_C0920 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Y1U_C0921 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Y1U_C0420 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Y1U_C0969 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Y1U_C0124 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Y1U_C0795 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Y1U_C1175 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Y1U_C1220 Hydrolase, haloacid dehalogenase-like family K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D Y1U_C0341 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Y1U_C0500 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Y1U_C0131 cyclo-nucleotide phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Y1U_C1050 Pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Y1U_C1047 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Y1U_C1856 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Y1U_C1187 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Y1U_C1188 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Y1U_C1630 late competence protein required for DNA binding and uptake K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Y1U_C0471 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Y1U_C1710 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Y1U_C0717 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Y1U_C0555 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Y1U_C0672 short chain dehydrogenase/reductase family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:stw00250]
D Y1U_C1613 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Y1U_C0362 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Y1U_C1038 aspartate aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D Y1U_C0444 Hydrolase in agr operon K13566 NIT2; omega-amidase [EC:3.5.1.3]
D Y1U_C1530 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Y1U_C1702 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Y1U_C1701 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Y1U_C1835 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Y1U_C0045 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Y1U_C0502 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Y1U_C0412 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Y1U_C1664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Y1U_C0504 Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Y1U_C0503 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Y1U_C0998 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Y1U_C0032 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:stw00260]
D Y1U_C0363 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Y1U_C1213 Aspartate-semialdehyde dehydrogenase, putative K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Y1U_C0451 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Y1U_C0452 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Y1U_C1764 Threonine synthase, putative K01733 thrC; threonine synthase [EC:4.2.3.1]
D Y1U_C0721 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Y1U_C1108 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Y1U_C1422 D-3-phosphoglycerate dehydrogenase, putative K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Y1U_C1424 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Y1U_C1413 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Y1U_C0672 short chain dehydrogenase/reductase family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C1229 L-serine dehydratase subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Y1U_C0140 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Y1U_C1481 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Y1U_C1482 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:stw00270]
D Y1U_C0076 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Y1U_C1014 serine acetyltransferase (SAT) K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Y1U_C0352 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Y1U_C1016 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Y1U_C1015 Cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Y1U_C0338 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Y1U_C0561 homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D Y1U_C0753 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Y1U_C1074 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Y1U_C0541 MTA/SAH nucleosidase (5-methylthioadenosine/S-adenosylhomocysteine nucleosidase) K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Y1U_C0445 Aspartate aminotransferase, putative K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D Y1U_C1078 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D Y1U_C1795 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0657 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0279 hypothetical protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Y1U_C0378 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Y1U_C0363 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Y1U_C1213 Aspartate-semialdehyde dehydrogenase, putative K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Y1U_C0451 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Y1U_C1125 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Y1U_C0337 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Y1U_C0907 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Y1U_C0567 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Y1U_C1319 Glutamate--cysteine ligase, putative/amino acid ligase, putative K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Y1U_C1197 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C0619 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C1229 L-serine dehydratase subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Y1U_C1422 D-3-phosphoglycerate dehydrogenase, putative K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Y1U_C1424 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:stw00280]
D Y1U_C0567 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C0554 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:stw00290]
D Y1U_C0140 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Y1U_C1104 isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Y1U_C1103 isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Y1U_C1105 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Y1U_C0958 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1758 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1757 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Y1U_C1756 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Y1U_C1499 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Y1U_C1759 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Y1U_C0567 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Y1U_C1530 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Y1U_C1106 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:stw00300]
D Y1U_C0451 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Y1U_C0363 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Y1U_C1213 Aspartate-semialdehyde dehydrogenase, putative K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Y1U_C1212 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Y1U_C0407 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Y1U_C1724 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D Y1U_C0449 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Y1U_C0241 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Y1U_C0026 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D Y1U_C1723 Peptidase, M20/M25/M40 family protein K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D Y1U_C1470 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:stw00220]
D Y1U_C0578 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Y1U_C1702 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Y1U_C1701 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Y1U_C0269 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Y1U_C0268 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Y1U_C0267 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D Y1U_C1664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Y1U_C0412 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Y1U_C1530 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Y1U_C0447 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Y1U_C0448 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Y1U_C0446 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Y1U_C0449 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:stw00330]
D Y1U_C0960 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Y1U_C1736 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Y1U_C1604 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Y1U_C1603 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:stw00340]
D Y1U_C1140 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Y1U_C1141 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Y1U_C1133 Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Y1U_C1134 phosphoribosyl-ATP pyrophosphohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D Y1U_C1136 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Y1U_C1137 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Y1U_C1135 Imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Y1U_C1138 imidazoleglycerol-phosphate dehydratase (IGPD) K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Y1U_C1142 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Y1U_C1149 Histidinol phosphatase-like protein hydrolase of the PHP family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Y1U_C1139 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Y1U_C1226 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Y1U_C1228 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
C 00350 Tyrosine metabolism [PATH:stw00350]
D Y1U_C1142 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Y1U_C0988 Alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
D Y1U_C1142 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:stw00400]
D Y1U_C1618 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Y1U_C1619 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Y1U_C0615 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Y1U_C0613 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D Y1U_C0621 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Y1U_C0620 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Y1U_C0616 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Y1U_C1487 Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Y1U_C1486 Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Y1U_C1485 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Y1U_C1483 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Y1U_C1484 Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Y1U_C1481 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Y1U_C1482 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Y1U_C1083 hypothetical protein K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D Y1U_C0617 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Y1U_C0622 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Y1U_C1142 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:stw00430]
D Y1U_C1355 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Y1U_C1742 Acetate kinase, putative K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:stw00450]
D Y1U_C0337 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Y1U_C1015 Cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Y1U_C0338 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Y1U_C0753 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Y1U_C0155 aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Y1U_C1545 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Y1U_C0433 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:stw00460]
D Y1U_C1613 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Y1U_C0362 asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Y1U_C0721 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:stw00470]
D Y1U_C1616 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Y1U_C1477 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Y1U_C0727 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Y1U_C0729 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Y1U_C0244 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Y1U_C0698 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Y1U_C0241 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:stw00480]
D Y1U_C1319 Glutamate--cysteine ligase, putative/amino acid ligase, putative K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Y1U_C0892 lysyl-aminopeptidase, aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Y1U_C0393 Glutathione reductase (GR) K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D Y1U_C1182 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:stw00511]
D Y1U_C1305 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:stw00542]
D Y1U_C0152 Glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:stw00541]
D Y1U_C1720 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Y1U_C1308 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C1272 UDP-glucose 4-epimerase, putative K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C0761 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Y1U_C0822 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D Y1U_C1160 glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Y1U_C1158 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Y1U_C0827 sugar biosynthesis protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C0585 dTDP-4-dehydrorhamnose 3,5-epimerase-related enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C1159 dTDP-4-keto-L-rhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C1376 dTDP-4-keto-L-rhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Y1U_C0826 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Y1U_C1622 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Y1U_C0538 N-acetylglucosamine-1-phosphate uridyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:stw00550]
D Y1U_C1454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Y1U_C0763 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Y1U_C1432 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Y1U_C0228 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Y1U_C0698 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Y1U_C1477 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Y1U_C1470 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Y1U_C0595 Diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D Y1U_C0186 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Y1U_C0150 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Y1U_C0257 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Y1U_C1595 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Y1U_C0699 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Y1U_C0220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Y1U_C0205 Membrane carboxypeptidase (Penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D Y1U_C0073 D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Y1U_C0106 D-alanyl-D-alanine-carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Y1U_C0334 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D Y1U_C1170 Mur ligase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Y1U_C1171 cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Y1U_C0774 UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D Y1U_C0572 Putative peptidoglycan branched peptide synthesis protein, alanine adding enzyme, beta-lactam resistance factor MurN K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D Y1U_C0333 peptidoglycan branched peptide synthesis protein, alanine adding enzyme K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D Y1U_C1754 Membrane carboxypeptidase (Penicillin-binding protein) K03693 pbp1b; penicillin-binding protein 1B
D Y1U_C0590 Penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D Y1U_C1596 penicillin binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:stw00552]
D Y1U_C0150 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Y1U_C0257 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Y1U_C0152 Glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Y1U_C0398 glycosyltransferase teichoic acid biosynthesis protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D Y1U_C0727 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Y1U_C0729 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Y1U_C0728 Membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export
D Y1U_C0730 extramembranal protein K03740 dltD; D-alanine transfer protein
D Y1U_C0323 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Y1U_C0836 cpsW K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Y1U_C0623 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Y1U_C0813 Eps7A K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Y1U_C0611 phosphoglycerol transferase/alkaline phosphatase superfamily protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D Y1U_C0546 glycosyl transferase family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:stw00543]
D Y1U_C0152 Glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Y1U_C0076 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Y1U_C1014 serine acetyltransferase (SAT) K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:stw00730]
D Y1U_C1361 Aminotransferase (Class V), putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C0396 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C0397 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Y1U_C1686 Ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Y1U_C1684 Thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Y1U_C1808 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:stw00740]
D Y1U_C0319 HAD superfamily hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D Y1U_C0903 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Y1U_C0780 nitro/flavin reductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D Y1U_C0539 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:stw00750]
D Y1U_C0113 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Y1U_C1424 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Y1U_C1764 Threonine synthase, putative K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:stw00760]
D Y1U_C0215 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Y1U_C0808 Purine nucleoside phosphorylase (Family 2) K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Y1U_C0812 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Y1U_C1515 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Y1U_C0216 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Y1U_C1357 putative inorganic polyphosphate/ATP-NAD kinase PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:stw00770]
D Y1U_C0958 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1758 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Y1U_C1757 acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Y1U_C1756 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Y1U_C1499 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Y1U_C1759 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Y1U_C0086 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Y1U_C1054 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D Y1U_C1068 phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D Y1U_C1069 putative phosphopantothenoylcysteine decarboxylase CoaC K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D Y1U_C1543 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Y1U_C0598 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Y1U_C1617 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Y1U_C0567 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:stw00780]
D Y1U_C0372 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Y1U_C0371 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Y1U_C0374 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Y1U_C1075 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:stw00785]
D Y1U_C0889 lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C0871 acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Y1U_C0872 acetoin dehydrogenase complex, E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Y1U_C0873 Pyruvate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:stw00790]
D Y1U_C1437 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Y1U_C1434 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Y1U_C1433 hydroxymethylpterin pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Y1U_C1436 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Y1U_C0556 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Y1U_C1439 folylpolyglutamate synthase / dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Y1U_C0394 folylpolyglutamate synthase / dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Y1U_C0738 Aminodeoxychorismate lyase apoprotein / aminodeoxychorismate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Y1U_C1029 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Y1U_C1028 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Y1U_C1030 protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Y1U_C1027 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:stw00670]
D Y1U_C0556 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Y1U_C1067 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Y1U_C0588 methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Y1U_C0721 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Y1U_C0034 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Y1U_C0035 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Y1U_C1331 Methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Y1U_C0555 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D Y1U_C0754 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Y1U_C1722 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:stw00860]
D Y1U_C0950 ferrochelatase (protoheme ferro-lyase) (heme synthetase) K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:stw00900]
D Y1U_C0554 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D Y1U_C0553 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D Y1U_C0533 Mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D Y1U_C0535 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D Y1U_C0534 mevalonate pyrophosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D Y1U_C0536 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Y1U_C1118 geranyltranstransferase, farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Y1U_C0186 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Y1U_C0294 Transketolase, putative K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:stw00523]
D Y1U_C1160 glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Y1U_C1158 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Y1U_C0827 sugar biosynthesis protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C0585 dTDP-4-dehydrorhamnose 3,5-epimerase-related enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C1159 dTDP-4-keto-L-rhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C1376 dTDP-4-keto-L-rhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Y1U_C0826 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D Y1U_C1488 hypothetical protein K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D Y1U_C1158 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Y1U_C0690 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:stw00332]
D Y1U_C1604 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Y1U_C1603 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:stw00261]
D Y1U_C0363 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Y1U_C1213 Aspartate-semialdehyde dehydrogenase, putative K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Y1U_C1212 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Y1U_C0407 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:stw00521]
D Y1U_C0695 glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Y1U_C1071 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Y1U_C0900 fructose-1 6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Y1U_C1160 glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Y1U_C1158 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Y1U_C0827 sugar biosynthesis protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C0585 dTDP-4-dehydrorhamnose 3,5-epimerase-related enzyme K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C1159 dTDP-4-keto-L-rhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Y1U_C1376 dTDP-4-keto-L-rhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Y1U_C0826 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Y1U_C0695 glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:stw00525]
D Y1U_C1160 glucose-1-phosphate thymidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Y1U_C1158 dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:stw00401]
D Y1U_C0617 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Y1U_C1142 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Y1U_C1487 Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Y1U_C1486 Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Y1U_C0370 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Y1U_C0371 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Y1U_C0029 acyl carrier protein K02078 acpP; acyl carrier protein
D Y1U_C0368 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Y1U_C1074 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:stw00362]
D Y1U_C1264 Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Y1U_C0801 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation
D Y1U_C0235 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:stw00625]
D Y1U_C0988 Alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D Y1U_C1264 Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:stw00622]
D Y1U_C1264 Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Y1U_C0801 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D Y1U_C1264 Glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D Y1U_C0269 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D Y1U_C0268 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D Y1U_C0267 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D Y1U_C0801 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:stw00626]
D Y1U_C0988 Alcohol dehydrogenase, propanol-preferring K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:stw03020]
D Y1U_C1753 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Y1U_C1752 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Y1U_C1803 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Y1U_C1333 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Y1U_C0123 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:stw03010]
D Y1U_C0569 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Y1U_C0068 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Y1U_C1823 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Y1U_C1882 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Y1U_C1812 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Y1U_C1640 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Y1U_C1678 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Y1U_C1815 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Y1U_C0088 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Y1U_C1830 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Y1U_C1804 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Y1U_C1679 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Y1U_C1805 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Y1U_C1816 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Y1U_C0145 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Y1U_C1441 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Y1U_C1820 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Y1U_C1638 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Y1U_C1825 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Y1U_C1055 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Y1U_C1385 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Y1U_C1705 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Y1U_C1826 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Y1U_C1829 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Y1U_C1828 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Y1U_C1817 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Y1U_C1814 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Y1U_C0512 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Y1U_C1885 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Y1U_C0511 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Y1U_C1706 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Y1U_C0087 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Y1U_C1819 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Y1U_C1810 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Y1U_C1822 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Y1U_C1802 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Y1U_C1813 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Y1U_C1081 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Y1U_C0798 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Y1U_C0401 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Y1U_C1824 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Y1U_C1827 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Y1U_C1818 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Y1U_C0402 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Y1U_C1851 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Y1U_C1821 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Y1U_C1811 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Y1U_C0712 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Y1U_C1865 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Y1U_C1866 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Y1U_C1697 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Y1U_C0797 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Y1U_C1806 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Y1U_Cr001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:stw00970]
D Y1U_Ct001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct033 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Y1U_Ct052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Y1U_Ct048 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Y1U_Ct003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Y1U_Ct037 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Y1U_Ct032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Y1U_Ct030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Y1U_Ct043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Y1U_Ct055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Y1U_Ct023 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct047 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct041 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Y1U_Ct021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Y1U_Ct007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Y1U_Ct029 tRNA-His K14226 tRNA-His; tRNA His
D Y1U_Ct017 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Y1U_Ct022 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Y1U_Ct031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Y1U_Ct038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Y1U_Ct049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Y1U_Ct014 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct012 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct025 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct011 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Y1U_Ct026 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Y1U_Ct010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Y1U_Ct013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct024 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Y1U_Ct040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Y1U_Ct054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Y1U_Ct028 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Y1U_Ct027 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Y1U_Ct042 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Y1U_Ct002 tRNA-Val K14237 tRNA-Val; tRNA Val
D Y1U_Ct020 tRNA-Val K14237 tRNA-Val; tRNA Val
D Y1U_Ct036 tRNA-Val K14237 tRNA-Val; tRNA Val
D Y1U_C1703 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Y1U_C1522 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Y1U_C1521 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Y1U_C1523 glutamyl-tRNA Gln amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Y1U_C0441 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Y1U_C1862 aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Y1U_C1037 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Y1U_C0484 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Y1U_C0485 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Y1U_C0548 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Y1U_C0313 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Y1U_C0077 cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Y1U_C0433 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Y1U_C1331 Methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Y1U_C0459 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Y1U_C0211 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Y1U_C0708 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Y1U_C0661 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Y1U_C0047 Arginyl-tRNA synthetase, putative K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Y1U_C0189 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Y1U_C1864 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Y1U_C1209 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Y1U_C1207 Phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Y1U_C1755 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Y1U_C1903 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:stw03060]
D Y1U_C1809 Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D Y1U_C0206 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Y1U_C0600 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Y1U_C0185 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Y1U_C1699 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C0234 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C1620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Y1U_C0983 SRP54, signal recognition particle GTPase protein, putative K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Y1U_C1335 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Y1U_C0881 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D Y1U_C0880 sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
D Y1U_C0789 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Y1U_C1653 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Y1U_C0498 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:stw04122]
D Y1U_C1361 Aminotransferase (Class V), putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C0396 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C1889 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Y1U_C1838 bacteriocin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Y1U_C0520 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Y1U_C0397 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:stw03018]
D Y1U_C0609 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Y1U_C0074 polynucleotide phosphorylase, (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Y1U_C0601 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Y1U_C1462 ATP-dependent RNA helicase, dead/deah box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Y1U_C0387 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Y1U_C1662 mRNA degradation ribonuclease J1/J2enzyme K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Y1U_C1090 Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Y1U_C0110 Hsp70-like protein K04043 dnaK; molecular chaperone DnaK
D Y1U_C0193 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:stw03030]
D Y1U_C1496 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Y1U_C1101 DNA polymeraDNA polymerase III alphase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Y1U_C0060 DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Y1U_C1077 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Y1U_C0472 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Y1U_C0688 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Y1U_C0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Y1U_C1884 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Y1U_C1383 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Y1U_C1729 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1639 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C0978 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Y1U_C1652 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D Y1U_C1648 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Y1U_C1448 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:stw03410]
D Y1U_C1123 endonuclease III, DNA repair K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Y1U_C0866 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Y1U_C1643 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Y1U_C0597 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Y1U_C0056 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Y1U_C1445 3'-exo-deoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Y1U_C1648 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Y1U_C1127 single strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Y1U_C1448 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:stw03420]
D Y1U_C0006 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Y1U_C1634 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Y1U_C1391 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Y1U_C1219 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Y1U_C0908 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Y1U_C1648 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Y1U_C1448 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:stw03430]
D Y1U_C0050 Mismatch repair ATPase (MutS family) K03555 mutS; DNA mismatch repair protein MutS
D Y1U_C1649 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D Y1U_C0053 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D Y1U_C0658 LlaKR2I restriction enzyme K03573 mutH; DNA mismatch repair protein MutH
D Y1U_C0908 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Y1U_C1120 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Y1U_C1119 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Y1U_C1127 single strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Y1U_C1729 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1639 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1101 DNA polymeraDNA polymerase III alphase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Y1U_C0060 DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Y1U_C0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Y1U_C1077 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Y1U_C0688 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Y1U_C0472 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Y1U_C1496 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Y1U_C1448 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:stw03440]
D Y1U_C1127 single strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Y1U_C1729 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1639 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1901 recombination protein F K03629 recF; DNA replication and repair protein RecF
D Y1U_C0027 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Y1U_C0591 Recombination protein recR K06187 recR; recombination protein RecR
D Y1U_C0058 recombinase A K03553 recA; recombination protein RecA
D Y1U_C1648 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Y1U_C0055 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Y1U_C1831 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Y1U_C1615 ATP-dependent DNA helicase recG, transcription-repair coupling factor, putative K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Y1U_C1654 exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Y1U_C1101 DNA polymeraDNA polymerase III alphase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Y1U_C0060 DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Y1U_C0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Y1U_C1077 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Y1U_C0688 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Y1U_C0472 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Y1U_C1496 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Y1U_C1332 Replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:stw03250]
D Y1U_C0490 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:stw02010]
D Y1U_C1428 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Y1U_C1429 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D Y1U_C1430 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D Y1U_C1431 ABC-type spermidine/putrescine transport system, ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Y1U_C1224 choline/proline/glycine betaine ABC uptake transporter substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D Y1U_C1222 Proline/glycine betaine ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D Y1U_C1225 choline/proline/glycine betaine ABC uptake transporter membrane-spanning protein K05846 opuBD; osmoprotectant transport system permease protein
D Y1U_C1223 choline/proline/glycine betaine ABC uptake transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Y1U_C1046 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D Y1U_C1044 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D Y1U_C1043 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D Y1U_C1045 ABC-type uncharacterized transport system, ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D Y1U_C0898 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D Y1U_C0897 phosphate ABC uptake transporter membrane-spanning protein K02037 pstC; phosphate transport system permease protein
D Y1U_C0896 ABC-type phosphate transport system, permease component K02038 pstA; phosphate transport system permease protein
D Y1U_C0894 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Y1U_C0895 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Y1U_C1393 ABC-type amino acid transport system, periplasmic and permease components K10036 glnH; glutamine transport system substrate-binding protein
D Y1U_C1394 ABC-type polar amino acid transport system, ATPase component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C0768 ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D Y1U_C0766 ABC-type amino acid transport system, permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Y1U_C0767 ABC-type amino acid transport system, permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Y1U_C0769 ABC-type polar amino acid transport system, ATPase component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C0917 Amino acid ABC superfamily ATP binding cassette transporter, binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C1549 Polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C0282 polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C0916 L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein
D Y1U_C1548 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D Y1U_C1547 ABC-type polar amino acid transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C1386 amino acid ABC transporter periplasmic protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Y1U_C1389 hypothetical protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Y1U_C1388 acetate kinase K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Y1U_C0580 polar amino acid ABC uptake transporter membrane-spanning protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D Y1U_C0581 amino acid (glutamine) ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C0149 polar amino acid ABC uptake transporter substrate binding protein/membrane-spanning protein K17073 lysX1; putative lysine transport system substrate-binding protein
D Y1U_C0148 polar amino acid ABC uptake transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D Y1U_C0345 Branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Y1U_C0346 branched-chain amino acid ABC uptake transporter membrane-spanning protein K01997 livH; branched-chain amino acid transport system permease protein
D Y1U_C0347 branched-chain amino acid ABC uptake transporter membrane-spanning protein K01998 livM; branched-chain amino acid transport system permease protein
D Y1U_C0348 ABC-type branched-chain amino acid transport system, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Y1U_C0349 ABC-type branched-chain amino acid transport system, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Y1U_C0283 ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D Y1U_C1527 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D Y1U_C0288 ABC transporter membrane-spanning protein K02072 metI; D-methionine transport system permease protein
D Y1U_C0287 ABC transporter ATP binding protein K02071 metN; D-methionine transport system ATP-binding protein
D Y1U_C1345 oligopeptide binding protein 1 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1347 oligopeptide binding protein 3 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0115 oligopeptide binding protein 2 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0160 oligopeptide ABC uptake transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1344 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D Y1U_C0165 dipeptide/oligopeptide ABC transporter permeaseed K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0164 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0163 oligopeptide ABC uptake transporter membrane-spanning proteind K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1343 oligopeptide ABC uptake transporter membrane-binding protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1342 oligopeptide ABC uptake transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0168 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0167 dipeptide/oligopeptide ABC transporter ATP binding proteind K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0166 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C1341 oligopeptide ABC uptake transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Y1U_C1004 Zinc ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein
D Y1U_C0176 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein
D Y1U_C0175 zinc (Zn2+) ABC uptake transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Y1U_C0274 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Y1U_C0275 ABC-type cobalt transport system, permease component CbiQ-like protein transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D Y1U_C0276 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Y1U_C0652 Biotin synthase K03523 bioY; biotin transport system substrate-specific component
D Y1U_C1893 ABC transporter membrane-spanning protein K16785 ecfT; energy-coupling factor transport system permease protein
D Y1U_C0293 ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D Y1U_C1895 cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Y1U_C1894 cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Y1U_C1249 ABC-type antimicrobial peptide transport system,permease component K19084 braE; bacitracin transport system permease protein
D Y1U_C1250 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D Y1U_C0785 cell division ABC transporter permease K09811 ftsX; cell division transport system permease protein
D Y1U_C0784 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D Y1U_C1587 ABC transporter ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C1586 lipid/multidrug/protein-type ABC exporter ATP binding/membrane-spanning protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0724 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0514 lipid/multidrug/protein-type ABC exporter ATP binding/membrane-spanning protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0415 ABC transporter ATP binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0515 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0416 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0725 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C1583 Competence factor transporting ATP-binding/permease protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS) [PATH:stw02060]
D Y1U_C1180 phosphoenolpyruvate-protein phosphotransferase (Phosphotransferase system, enzyme I) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Y1U_C1181 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Y1U_C0181 Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Y1U_C0180 Glucose-specific phosphotransferase enzyme IIA component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D Y1U_C1624 sucrose PTS component II K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Y1U_C1268 PTS cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D Y1U_C0317 Phosphotransferase system, mannose/fructose-specific component IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Y1U_C0316 Mannose-specific phosphotransferase system component IIC low K02795 manY; mannose PTS system EIIC component
D Y1U_C0315 IIDman K02796 manZ; mannose PTS system EIID component
D Y1U_C0392 Phosphotransferase system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Y1U_C0390 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:stw03070]
D Y1U_C0206 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Y1U_C0600 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Y1U_C1809 Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D Y1U_C0185 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Y1U_C1699 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C0234 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C1620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Y1U_C1335 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Y1U_C0983 SRP54, signal recognition particle GTPase protein, putative K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Y1U_C0881 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D Y1U_C0880 sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:stw02020]
D Y1U_C0898 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D Y1U_C1909 exported serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Y1U_C0771 sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Y1U_C0770 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D Y1U_C0001 chromosome replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D Y1U_C1277 cyclopropane-fatty-acyl-phospholipid synthase K10682 saeR; two-component system, OmpR family, response regulator SaeR
D Y1U_C1249 ABC-type antimicrobial peptide transport system,permease component K19084 braE; bacitracin transport system permease protein
D Y1U_C1250 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D Y1U_C1251 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Y1U_C1252 DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D Y1U_C0727 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Y1U_C0728 Membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export
D Y1U_C0729 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Y1U_C0730 extramembranal protein K03740 dltD; D-alanine transfer protein
D Y1U_C1172 lysyl-tRNA synthetase (class II) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D Y1U_C1063 sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Y1U_C1066 response regulatored K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D Y1U_C0106 D-alanyl-D-alanine-carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Y1U_C0300 Sensor protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Y1U_C0299 TCS response regulator CovR-like protein K18941 arlR; two-component system, OmpR family, response regulator ArlR
D Y1U_C0972 sensor histidine kinase (like protein to spaK Bsu) K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Y1U_C0973 response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D Y1U_C0091 Lantibiotic biosynthesis protein K20483 nisB; lantibiotic biosynthesis protein
D Y1U_C0092 lantibiotic biosynthesis protein K20484 nisC; lantibiotic biosynthesis protein
D Y1U_C1580 Sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D Y1U_C1579 response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D Y1U_C0120 transcriptional regulator K12296 comX1_2; competence protein ComX
D Y1U_C0010 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D Y1U_C1237 Sensor histidine kinase-like protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Y1U_C1236 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR
D Y1U_C1325 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D Y1U_C1324 response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D Y1U_C1326 hypothetical protein K11622 liaF; lia operon protein LiaF
D Y1U_C0477 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Y1U_C1664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Y1U_C1834 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:stw02024]
D Y1U_C0378 S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Y1U_C1487 Anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Y1U_C1486 Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Y1U_C0828 hypothetical protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Y1U_C0829 EpsQ protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Y1U_C1618 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Y1U_C1619 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Y1U_C0345 Branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Y1U_C0346 branched-chain amino acid ABC uptake transporter membrane-spanning protein K01997 livH; branched-chain amino acid transport system permease protein
D Y1U_C0347 branched-chain amino acid ABC uptake transporter membrane-spanning protein K01998 livM; branched-chain amino acid transport system permease protein
D Y1U_C0348 ABC-type branched-chain amino acid transport system, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Y1U_C0349 ABC-type branched-chain amino acid transport system, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Y1U_C1580 Sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D Y1U_C1579 response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
D Y1U_C1063 sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Y1U_C1066 response regulatored K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D Y1U_C1345 oligopeptide binding protein 1 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1347 oligopeptide binding protein 3 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0115 oligopeptide binding protein 2 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0160 oligopeptide ABC uptake transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1344 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D Y1U_C0165 dipeptide/oligopeptide ABC transporter permeaseed K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0164 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0163 oligopeptide ABC uptake transporter membrane-spanning proteind K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1343 oligopeptide ABC uptake transporter membrane-binding protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1342 oligopeptide ABC uptake transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0168 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0167 dipeptide/oligopeptide ABC transporter ATP binding proteind K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0166 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C1341 oligopeptide ABC uptake transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Y1U_C0258 Transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D Y1U_C0120 transcriptional regulator K12296 comX1_2; competence protein ComX
D Y1U_C1581 signal peptide protein K20343 blpC; peptide pheromone BlpC
D Y1U_C1583 Competence factor transporting ATP-binding/permease protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Y1U_C1582 lactococcin A ABC transporter permease K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Y1U_C1843 MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D Y1U_C1466 XRE family transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D Y1U_C0964 MutR family transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D Y1U_C1846 MutR family transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D Y1U_C1699 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C0234 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C0206 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Y1U_C0600 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Y1U_C1809 Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D Y1U_C0185 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Y1U_C1620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Y1U_C1335 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Y1U_C0983 SRP54, signal recognition particle GTPase protein, putative K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Y1U_C0091 Lantibiotic biosynthesis protein K20483 nisB; lantibiotic biosynthesis protein
D Y1U_C0092 lantibiotic biosynthesis protein K20484 nisC; lantibiotic biosynthesis protein
D Y1U_C0972 sensor histidine kinase (like protein to spaK Bsu) K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Y1U_C0973 response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:stw02040]
D Y1U_C0917 Amino acid ABC superfamily ATP binding cassette transporter, binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C1549 Polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C0282 polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C1382 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Y1U_C0609 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:stw01501]
D Y1U_C0010 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D Y1U_C1345 oligopeptide binding protein 1 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1347 oligopeptide binding protein 3 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0115 oligopeptide binding protein 2 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0160 oligopeptide ABC uptake transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1344 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D Y1U_C0165 dipeptide/oligopeptide ABC transporter permeaseed K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0164 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0163 oligopeptide ABC uptake transporter membrane-spanning proteind K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1343 oligopeptide ABC uptake transporter membrane-binding protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1342 oligopeptide ABC uptake transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0168 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0167 dipeptide/oligopeptide ABC transporter ATP binding proteind K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0166 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C1341 oligopeptide ABC uptake transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Y1U_C0690 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Y1U_C0220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Y1U_C1754 Membrane carboxypeptidase (Penicillin-binding protein) K03693 pbp1b; penicillin-binding protein 1B
D Y1U_C0205 Membrane carboxypeptidase (Penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D Y1U_C0590 Penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D Y1U_C1596 penicillin binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:stw01502]
D Y1U_C1477 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Y1U_C1616 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Y1U_C1470 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Y1U_C1595 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Y1U_C0699 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Y1U_C0106 D-alanyl-D-alanine-carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:stw01503]
D Y1U_C1909 exported serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Y1U_C0490 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Y1U_C0727 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Y1U_C0728 Membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export
D Y1U_C0729 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Y1U_C0730 extramembranal protein K03740 dltD; D-alanine transfer protein
D Y1U_C1172 lysyl-tRNA synthetase (class II) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:stw01000]
C 01001 Protein kinases [BR:stw01001]
D Y1U_C1328 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Y1U_C0816 Eps5D K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Y1U_C0771 sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Y1U_C1251 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Y1U_C1063 sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Y1U_C0300 Sensor protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Y1U_C0972 sensor histidine kinase (like protein to spaK Bsu) K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Y1U_C1237 Sensor histidine kinase-like protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Y1U_C1325 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D Y1U_C1580 Sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:stw01009]
D Y1U_C0279 hypothetical protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Y1U_C1329 phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Y1U_C1413 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:stw01002]
D Y1U_C0498 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Y1U_C0218 Aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D Y1U_C0986 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Y1U_C0811 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Y1U_C1364 Glutamine amidotransferase (Class I), putative K07010 K07010; putative glutamine amidotransferase
D Y1U_C1583 Competence factor transporting ATP-binding/permease protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Y1U_C0023 glucan binding protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Y1U_C0424 surface antigen K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Y1U_C0032 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Y1U_C0998 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Y1U_C0934 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D Y1U_C1195 sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D Y1U_C1737 hypothetical protein K07052 K07052; CAAX protease family protein
D Y1U_C1739 CAAX amino protease family protein K07052 K07052; CAAX protease family protein
D Y1U_C1562 CAAX amino protease family protein K07052 K07052; CAAX protease family protein
D Y1U_C0892 lysyl-aminopeptidase, aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D Y1U_C0437 oligopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Y1U_C1768 Endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D Y1U_C0106 D-alanyl-D-alanine-carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Y1U_C0802 dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D Y1U_C0791 Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Y1U_C1723 Peptidase, M20/M25/M40 family protein K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D Y1U_C1451 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Y1U_C0605 dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Y1U_C1631 aminopeptidase P, XAA-pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Y1U_C1314 Zinc metalloprotease ZmpB K08643 zmpB; zinc metalloprotease ZmpB [EC:3.4.24.-]
D Y1U_C0061 Aminopeptidase pepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Y1U_C0013 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Y1U_C1735 glutamyl-aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D Y1U_C0684 putative protease htpX like protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Y1U_C0188 membrane-associated Zn-dependent protease 1 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Y1U_C1909 exported serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Y1U_C1057 protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D Y1U_C0073 D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Y1U_C0342 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Y1U_C1564 x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D Y1U_C1542 protease K07177 K07177; Lon-like protease
D Y1U_C0980 Putative transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D Y1U_C0789 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Y1U_C1653 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Y1U_C0651 Peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:stw01003]
D Y1U_C0546 glycosyl transferase family protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Y1U_C0545 glycosyl transferase, family 1 K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D Y1U_C0220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Y1U_C1754 Membrane carboxypeptidase (Penicillin-binding protein) K03693 pbp1b; penicillin-binding protein 1B
D Y1U_C0205 Membrane carboxypeptidase (Penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D Y1U_C0758 glycosyltransferase K21011 pelF; polysaccharide biosynthesis protein PelF
D Y1U_C0398 glycosyltransferase teichoic acid biosynthesis protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D Y1U_C0152 Glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:stw01005]
D Y1U_C0828 hypothetical protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Y1U_C0829 EpsQ protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D Y1U_C1371 Hexosyltransferase K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D Y1U_C1370 polysaccharide biosynthesis protein/rhamnosyl transferase K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D Y1U_C1367 polysaccharide biosynthesis protein/glycosyltransferase K12998 rgpE; glucosyltransferase [EC:2.4.1.-]
D Y1U_C1366 Hexosyltransferase K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D Y1U_C0152 Glycosyl transferase, group 4 family protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Y1U_C1378 glycosyl transferase family protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:stw01011]
D Y1U_C1454 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Y1U_C0763 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Y1U_C1432 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Y1U_C0228 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Y1U_C0698 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Y1U_C0334 UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D Y1U_C1477 D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Y1U_C0774 UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D Y1U_C0572 Putative peptidoglycan branched peptide synthesis protein, alanine adding enzyme, beta-lactam resistance factor MurN K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D Y1U_C0333 peptidoglycan branched peptide synthesis protein, alanine adding enzyme K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D Y1U_C1616 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Y1U_C0244 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Y1U_C1595 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Y1U_C0699 UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Y1U_C0150 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Y1U_C0257 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Y1U_C0220 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Y1U_C1754 Membrane carboxypeptidase (Penicillin-binding protein) K03693 pbp1b; penicillin-binding protein 1B
D Y1U_C0205 Membrane carboxypeptidase (Penicillin-binding protein) K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D Y1U_C0590 Penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D Y1U_C1596 penicillin binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
D Y1U_C0073 D-alanyl-D-alanine carboxypeptidase, penicillin-binding protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Y1U_C0106 D-alanyl-D-alanine-carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Y1U_C0023 glucan binding protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Y1U_C0424 surface antigen K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Y1U_C1195 sortase A K07284 srtA; sortase A [EC:3.4.22.70]
D Y1U_C0230 Aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:stw01004]
D Y1U_C0370 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Y1U_C0367 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Y1U_C0372 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Y1U_C0371 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Y1U_C0374 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Y1U_C0369 Putative trans-2-enoyl-ACP reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Y1U_C0365 enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D Y1U_C0028 glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Y1U_C0564 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Y1U_C1457 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:stw01006]
D Y1U_C1118 geranyltranstransferase, farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Y1U_C0186 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Y1U_C1079 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:stw01007]
D Y1U_C1703 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Y1U_C1755 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Y1U_C1903 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Y1U_C0077 cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Y1U_C0047 Arginyl-tRNA synthetase, putative K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Y1U_C0433 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Y1U_C0708 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Y1U_C0459 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Y1U_C0211 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Y1U_C0661 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Y1U_C1862 aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Y1U_C1037 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Y1U_C1864 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Y1U_C0484 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Y1U_C0485 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Y1U_C0313 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Y1U_C0189 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Y1U_C0548 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Y1U_C0441 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Y1U_C1209 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Y1U_C1207 Phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Y1U_C1530 aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Y1U_C0445 Aspartate aminotransferase, putative K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D Y1U_C0026 aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D Y1U_C1142 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Y1U_C0338 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Y1U_C0449 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Y1U_C0567 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Y1U_C0738 Aminodeoxychorismate lyase apoprotein / aminodeoxychorismate synthase, subunit I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D Y1U_C1424 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:stw00194]
D Y1U_C0467 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Y1U_C0466 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Y1U_C0465 ATP synthase F0F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Y1U_C0464 ATP synthase F0F1 subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Y1U_C0463 ATP synthase F0F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Y1U_C0462 ATP synthase F0F1 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Y1U_C0460 ATP synthase F0 sector subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Y1U_C0461 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:stw03000]
D Y1U_C1795 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0657 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0389 transcriptional repressor K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D Y1U_C0210 Transcriptional regulator, DeoR family K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D Y1U_C0606 catabolite control protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Y1U_C1311 galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Y1U_C1626 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D Y1U_C1773 trehalose operon transcriptional repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D Y1U_C0985 Transcription regulator GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D Y1U_C0063 MarR family transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D Y1U_C1665 glutamine synthetase transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D Y1U_C1495 Transcriptional regulator, MerR family K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D Y1U_C0693 ferric transport regulator protein K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Y1U_C0142 Crp-like transcriptional regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D Y1U_C1874 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D Y1U_C1875 Transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Y1U_C1075 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Y1U_C0258 Transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D Y1U_C1843 MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D Y1U_C1466 XRE family transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D Y1U_C0964 MutR family transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D Y1U_C1846 MutR family transcriptional regulator K20374 rgg3; HTH-type transcriptional regulator, SHP3-responsive repressor
D Y1U_C1681 pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D Y1U_C1363 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D Y1U_C1529 transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D Y1U_C0749 Transcriptional regulator, Cro/CI family K07727 K07727; putative transcriptional regulator
D Y1U_C0524 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D Y1U_C1741 hypothetical protein K07729 K07729; putative transcriptional regulator
D Y1U_C1910 Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Y1U_C0048 arginine repressor ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Y1U_C1116 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D Y1U_C0108 heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D Y1U_C0071 transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D Y1U_C0500 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Y1U_C0301 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D Y1U_C0120 transcriptional regulator K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:stw03021]
D Y1U_C1803 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Y1U_C1753 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Y1U_C1752 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Y1U_C0123 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D Y1U_C1333 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Y1U_C1382 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Y1U_C0325 transcription termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Y1U_C1627 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D Y1U_C0207 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Y1U_C0231 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:stw03019]
D Y1U_C1211 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Y1U_C1662 mRNA degradation ribonuclease J1/J2enzyme K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Y1U_C1090 Metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Y1U_C0387 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Y1U_C0601 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Y1U_C1682 CMP-binding factor K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Y1U_C1462 ATP-dependent RNA helicase, dead/deah box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Y1U_C1594 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D Y1U_C0609 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Y1U_C0074 polynucleotide phosphorylase, (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Y1U_C1100 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Y1U_C0110 Hsp70-like protein K04043 dnaK; molecular chaperone DnaK
D Y1U_C0193 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Y1U_C1024 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:stw03011]
D Y1U_C0569 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D Y1U_C0068 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Y1U_C1823 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Y1U_C1882 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Y1U_C1812 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Y1U_C1640 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Y1U_C1678 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Y1U_C1815 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Y1U_C0088 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Y1U_C1830 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Y1U_C1804 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Y1U_C1679 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Y1U_C1805 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Y1U_C1816 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Y1U_C0145 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Y1U_C1441 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Y1U_C1820 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Y1U_C1638 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Y1U_C1825 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Y1U_C1055 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Y1U_C1385 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Y1U_C1705 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Y1U_C1826 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Y1U_C1829 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Y1U_C1828 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Y1U_C1817 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Y1U_C1814 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Y1U_C1885 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Y1U_C0511 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Y1U_C1706 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Y1U_C0512 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Y1U_C0087 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Y1U_C1819 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Y1U_C1810 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Y1U_C1822 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Y1U_C1802 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Y1U_C1813 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Y1U_C1081 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Y1U_C0798 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Y1U_C0401 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Y1U_C1824 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Y1U_C1827 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Y1U_C1818 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Y1U_C0402 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Y1U_C1851 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Y1U_C1821 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Y1U_C1811 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Y1U_C0712 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Y1U_C1865 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Y1U_C1866 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Y1U_C1697 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Y1U_C0797 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Y1U_C1806 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Y1U_Cr003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:stw03009]
D Y1U_C1211 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Y1U_C0596 GTP-binding protein Era K03595 era; GTPase
D Y1U_C1396 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D Y1U_C0325 transcription termination-antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Y1U_C1627 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D Y1U_C0207 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Y1U_C1398 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Y1U_C0527 Pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Y1U_C1687 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Y1U_C1330 RNA-binding protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Y1U_C1053 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Y1U_C1544 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Y1U_C0128 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Y1U_C0297 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Y1U_C1598 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Y1U_C0475 Tetrapyrrole (Corrin/Porphyrin) methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Y1U_C0505 Methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D Y1U_C1117 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Y1U_C1725 RRNA (Guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D Y1U_C0082 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Y1U_C1908 Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Y1U_C0612 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Y1U_C1590 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Y1U_C0627 tRNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Y1U_C0251 Pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Y1U_C0499 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Y1U_C1356 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Y1U_C0204 Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Y1U_C1658 Ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Y1U_C1323 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Y1U_C0127 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Y1U_C1853 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Y1U_C0078 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D Y1U_C1462 ATP-dependent RNA helicase, dead/deah box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Y1U_C1594 ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D Y1U_C1686 Ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Y1U_C0304 GTP-binding protein engA K03977 engA; GTPase
D Y1U_C0979 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D Y1U_C1131 HflX GTPase, putative K03665 hflX; GTPase
D Y1U_C1517 GTP-binding protein YqeH K06948 yqeH; 30S ribosome assembly GTPase
D Y1U_C0720 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Y1U_C0135 GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Y1U_C0329 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Y1U_C0324 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D Y1U_C1900 hypothetical protein K14761 rlbA; ribosome-associated protein
D Y1U_C1513 hypothetical protein K09710 ybeB; ribosome-associated protein
D Y1U_C0594 metalloprotease K07042 ybeY; probable rRNA maturation factor
D Y1U_C1516 hypothetical protein K07574 yhbY; RNA-binding protein
D Y1U_C0356 ribosomal subunit interface protein, ribosomal protein S30AE family K05808 hpf; ribosome hibernation promoting factor
D Y1U_C0004 GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
D Y1U_C0298 putative metal-binding, possibly nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:stw03016]
D Y1U_C1129 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Y1U_C0408 CCA-adding enzyme (tRNA nucleotidyltransferase) K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Y1U_C0189 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Y1U_C0708 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Y1U_C0211 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Y1U_C0433 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Y1U_C0047 Arginyl-tRNA synthetase, putative K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Y1U_C0661 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Y1U_C1862 aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Y1U_C0441 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Y1U_C1037 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Y1U_C0548 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Y1U_C0313 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Y1U_C0077 cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Y1U_C0459 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Y1U_C1864 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Y1U_C1209 phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Y1U_C1207 Phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Y1U_C1755 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Y1U_C1903 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Y1U_C0136 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Y1U_C1505 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Y1U_C1501 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Y1U_C0112 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Y1U_C0904 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Y1U_C1361 Aminotransferase (Class V), putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C0396 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C0720 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Y1U_C1079 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Y1U_C0910 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Y1U_C1887 Putative tRNA(5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Y1U_C1700 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Y1U_C0484 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Y1U_C0485 glycyl-tRNA synthetase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Y1U_C1703 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Y1U_C0666 transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Y1U_C1728 Cytidine/deoxycytidylate deaminase family protein, putative K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Y1U_C0172 transcriptional regulator K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Y1U_C0971 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Y1U_C1322 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Y1U_C1165 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Y1U_C0255 RRNA methyltransferase, TrmH family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Y1U_C0236 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D Y1U_C1889 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Y1U_C0516 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Y1U_C1030 protein ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Y1U_C1029 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Y1U_C1028 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Y1U_C1027 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Y1U_C0782 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Y1U_C1696 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Y1U_C0397 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Y1U_C0011 cell-cycle protein, MesJ/Ycf62 family K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Y1U_C1659 glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Y1U_C1657 DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Y1U_C0321 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Y1U_C1511 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D Y1U_C0601 exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Y1U_C0074 polynucleotide phosphorylase, (PNPase) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:stw03012]
D Y1U_C0328 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Y1U_C0796 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Y1U_C1174 ATPase component of ABC transporter with duplicated ATPase domains K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Y1U_C0069 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Y1U_C0469 elongation factor Tu K02358 tuf; elongation factor Tu
D Y1U_C1677 elongation factor G K02355 fusA; elongation factor G
D Y1U_C0718 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Y1U_C0421 ribosome recycling factor K02838 frr; ribosome recycling factor
D Y1U_C0719 protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Y1U_C0005 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Y1U_C1807 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Y1U_C1629 elongation factor P K02356 efp; elongation factor P
D Y1U_C0783 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Y1U_C1468 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:stw03110]
D Y1U_C0072 ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Y1U_C0577 ATP-dependent Clp protease K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D Y1U_C1510 ATP-dependent proteinase ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D Y1U_C0558 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Y1U_C0110 Hsp70-like protein K04043 dnaK; molecular chaperone DnaK
D Y1U_C0193 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Y1U_C0111 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Y1U_C0171 Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D Y1U_C0109 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D Y1U_C0192 10 kDa chaperonin K04078 groES; chaperonin GroES
D Y1U_C1909 exported serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D Y1U_C0013 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Y1U_C0461 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Y1U_C1057 protease K01361 E3.4.21.96; lactocepin [EC:3.4.21.96]
D Y1U_C0490 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Y1U_C0603 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Y1U_C0440 protease maturation protein K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D Y1U_C1691 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:stw04131]
D Y1U_C0969 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Y1U_C1676 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Y1U_C1108 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D Y1U_C1099 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:stw03032]
D Y1U_C1795 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0657 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C1111 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Y1U_C0001 chromosome replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D Y1U_C1884 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Y1U_C1383 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Y1U_C0302 chromosome replication initiation / membrane attachment protein DnaB K03346 dnaB; replication initiation and membrane attachment protein
D Y1U_C0303 Replicative DNA helicase loader DnaI K11144 dnaI; primosomal protein DnaI
D Y1U_C1729 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1639 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1101 DNA polymeraDNA polymerase III alphase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Y1U_C0060 DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Y1U_C0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Y1U_C0688 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Y1U_C0472 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Y1U_C1496 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Y1U_C1077 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Y1U_C0978 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Y1U_C1652 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D Y1U_C1648 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Y1U_C1448 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Y1U_C1196 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Y1U_C1415 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Y1U_C0566 DNA topoisomerase IV (Subunit C) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Y1U_C0565 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Y1U_C0975 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:stw03036]
D Y1U_C1795 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0657 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C1211 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Y1U_C1111 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Y1U_C0001 chromosome replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D Y1U_C0692 DNA-binding ferritin-like protein (Oxidative damage protectant) K04047 dps; starvation-inducible DNA-binding protein
D Y1U_C1210 chromosome segregation SMC protein K03529 smc; chromosome segregation protein
D Y1U_C0249 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D Y1U_C0250 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D Y1U_C0701 cell division protein K03590 ftsA; cell division protein FtsA
D Y1U_C0008 MesJ/Ycf62 family cell-cycle protein K13052 divIC; cell division protein DivIC
D Y1U_C0784 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D Y1U_C1320 cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Y1U_C1597 Cell division protein FtsL K03586 ftsL; cell division protein FtsL
D Y1U_C0700 cell division protein K03589 ftsQ; cell division protein FtsQ
D Y1U_C0468 cell division protein K03588 ftsW; cell division protein FtsW
D Y1U_C0785 cell division ABC transporter permease K09811 ftsX; cell division transport system permease protein
D Y1U_C0702 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Y1U_C1414 Septation ring formation regulator K06286 ezrA; septation ring formation regulator
D Y1U_C0707 cell division initiation protein K04074 divIVA; cell division initiation protein
D Y1U_C0704 hypothetical protein K09772 sepF; cell division inhibitor SepF
D Y1U_C0021 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Y1U_C0022 Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Y1U_C1132 Cell division membrane protein K05837 rodA; rod shape determining protein RodA
D Y1U_C1910 Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Y1U_C0566 DNA topoisomerase IV (Subunit C) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Y1U_C0565 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Y1U_C1887 Putative tRNA(5-carboxymethylaminomethyl-2-thiouridylate) synthase subunit K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Y1U_C0297 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Y1U_C0971 tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Y1U_C0559 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D Y1U_C1022 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:stw03400]
D Y1U_C1420 methylguanine-DNA methyltransferaseed K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Y1U_C0866 Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Y1U_C1643 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Y1U_C1123 endonuclease III, DNA repair K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Y1U_C1390 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Y1U_C0576 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Y1U_C0126 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Y1U_C0786 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Y1U_C0411 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Y1U_C1710 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Y1U_C0056 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D Y1U_C0597 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Y1U_C1445 3'-exo-deoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Y1U_C1127 single strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Y1U_C1448 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Y1U_C1648 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Y1U_C1634 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Y1U_C1391 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Y1U_C1219 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D Y1U_C0908 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Y1U_C1753 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Y1U_C1752 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Y1U_C1803 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Y1U_C0123 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D Y1U_C1333 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Y1U_C0006 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Y1U_C0050 Mismatch repair ATPase (MutS family) K03555 mutS; DNA mismatch repair protein MutS
D Y1U_C1649 DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D Y1U_C0053 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D Y1U_C0658 LlaKR2I restriction enzyme K03573 mutH; DNA mismatch repair protein MutH
D Y1U_C1120 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Y1U_C1119 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Y1U_C1101 DNA polymeraDNA polymerase III alphase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Y1U_C0060 DNA polymerase III PolC K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Y1U_C0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Y1U_C0688 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Y1U_C0472 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Y1U_C1496 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Y1U_C1077 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Y1U_C1729 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1639 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1654 exonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Y1U_C0058 recombinase A K03553 recA; recombination protein RecA
D Y1U_C0055 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Y1U_C1831 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Y1U_C1332 Replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Y1U_C1303 ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50
D Y1U_C1304 ATP-dependent dsDNA exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D Y1U_C1709 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Y1U_C1901 recombination protein F K03629 recF; DNA replication and repair protein RecF
D Y1U_C1615 ATP-dependent DNA helicase recG, transcription-repair coupling factor, putative K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Y1U_C0027 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Y1U_C0591 Recombination protein recR K06187 recR; recombination protein RecR
D Y1U_C1115 DNA repair and genetic recombination protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D Y1U_C0221 Holliday junction-specific endonuclease K03700 recU; recombination protein U
D Y1U_C1608 Exodeoxyribonuclease V K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Y1U_C1609 ATP-dependent exonuclease, subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Y1U_C0930 CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D Y1U_C0634 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D Y1U_C1411 CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1
D Y1U_C1196 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Y1U_C1415 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Y1U_C0975 DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Y1U_C1111 histone-like DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Y1U_C1551 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Y1U_C1280 Nucleotidyltransferase/DNA polymerase involved in DNA repair K03502 umuC; DNA polymerase V
D Y1U_C0992 SOS responce UmuC protein K03502 umuC; DNA polymerase V
D Y1U_C0980 Putative transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88]
D Y1U_C0360 recombination regulator RecX K03565 recX; regulatory protein
D Y1U_C1041 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Y1U_C1187 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Y1U_C1188 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Y1U_C0714 Phosphoesterase, DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:stw03029]
D Y1U_C0328 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Y1U_C0796 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Y1U_C0069 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Y1U_C0469 elongation factor Tu K02358 tuf; elongation factor Tu
D Y1U_C1677 elongation factor G K02355 fusA; elongation factor G
D Y1U_C0596 GTP-binding protein Era K03595 era; GTPase
D Y1U_C1755 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Y1U_C0211 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Y1U_C1862 aspartyl-tRNA synthetase (aspartate--tRNA ligase) (AspRS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Y1U_C0047 Arginyl-tRNA synthetase, putative K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Y1U_C1522 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Y1U_C1521 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Y1U_C1523 glutamyl-tRNA Gln amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Y1U_C1729 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C1639 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Y1U_C0110 Hsp70-like protein K04043 dnaK; molecular chaperone DnaK
D Y1U_C0109 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D Y1U_C0193 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Y1U_C0192 10 kDa chaperonin K04078 groES; chaperonin GroES
D Y1U_C0111 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Y1U_C1361 Aminotransferase (Class V), putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C0396 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C1699 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C0234 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:stw02000]
D Y1U_C1587 ABC transporter ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C1586 lipid/multidrug/protein-type ABC exporter ATP binding/membrane-spanning protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0724 ABC-type multidrug transport system, ATPase and permease component K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0514 lipid/multidrug/protein-type ABC exporter ATP binding/membrane-spanning protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0415 ABC transporter ATP binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0515 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0416 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0725 ABC-type multidrug transport system, ATPase and permease component K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Y1U_C0262 putative ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Y1U_C1317 ABC-type multidrug/protein/lipid transport system, ATPase component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Y1U_C1583 Competence factor transporting ATP-binding/permease protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Y1U_C0409 ABC transporter, drug resistance ATPase-1 (drug RA1) family, ATP binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D Y1U_C1428 spermidine/putrescine-binding periplasmic protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Y1U_C1429 spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D Y1U_C1430 spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D Y1U_C1431 ABC-type spermidine/putrescine transport system, ATPase component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Y1U_C1224 choline/proline/glycine betaine ABC uptake transporter substrate binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D Y1U_C1222 Proline/glycine betaine ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D Y1U_C1225 choline/proline/glycine betaine ABC uptake transporter membrane-spanning protein K05846 opuBD; osmoprotectant transport system permease protein
D Y1U_C1223 choline/proline/glycine betaine ABC uptake transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Y1U_C1046 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D Y1U_C1044 ABC-type uncharacterized transport system, permease component K23535 nupB; general nucleoside transport system permease protein
D Y1U_C1043 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D Y1U_C1045 ABC-type uncharacterized transport system, ATPase component K23537 nupA; general nucleoside transport system ATP-binding protein
D Y1U_C1557 ABC-type uncharacterized transport system, permease component K02069 STAR2; UDP-glucose/iron transport system permease protein
D Y1U_C1558 ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Y1U_C0898 ABC-type phosphate transport system, periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D Y1U_C0897 phosphate ABC uptake transporter membrane-spanning protein K02037 pstC; phosphate transport system permease protein
D Y1U_C0896 ABC-type phosphate transport system, permease component K02038 pstA; phosphate transport system permease protein
D Y1U_C0894 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Y1U_C0895 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Y1U_C1393 ABC-type amino acid transport system, periplasmic and permease components K10036 glnH; glutamine transport system substrate-binding protein
D Y1U_C1394 ABC-type polar amino acid transport system, ATPase component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C0768 ABC-type amino acid transport/signal transduction system, periplasmic component/domain protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D Y1U_C0766 ABC-type amino acid transport system, permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Y1U_C0767 ABC-type amino acid transport system, permease component K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Y1U_C0769 ABC-type polar amino acid transport system, ATPase component K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C0917 Amino acid ABC superfamily ATP binding cassette transporter, binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C1549 Polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C0282 polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C0916 L-cystine transport system permease protein TcyB K10009 tcyB; L-cystine transport system permease protein
D Y1U_C1548 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D Y1U_C1547 ABC-type polar amino acid transport system, ATPase component K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C1386 amino acid ABC transporter periplasmic protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Y1U_C1389 hypothetical protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Y1U_C1388 acetate kinase K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Y1U_C0580 polar amino acid ABC uptake transporter membrane-spanning protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D Y1U_C0581 amino acid (glutamine) ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C0345 Branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Y1U_C0346 branched-chain amino acid ABC uptake transporter membrane-spanning protein K01997 livH; branched-chain amino acid transport system permease protein
D Y1U_C0347 branched-chain amino acid ABC uptake transporter membrane-spanning protein K01998 livM; branched-chain amino acid transport system permease protein
D Y1U_C0348 ABC-type branched-chain amino acid transport system, ATPase component K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Y1U_C0349 ABC-type branched-chain amino acid transport system, ATPase component K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Y1U_C0283 ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D Y1U_C1527 ABC-type metal ion transport system, periplasmic component/surface antigen K02073 metQ; D-methionine transport system substrate-binding protein
D Y1U_C0288 ABC transporter membrane-spanning protein K02072 metI; D-methionine transport system permease protein
D Y1U_C0287 ABC transporter ATP binding protein K02071 metN; D-methionine transport system ATP-binding protein
D Y1U_C1093 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Y1U_C0190 ABC transporter permease protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Y1U_C1092 ABC transporter membrane-spanning protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D Y1U_C0191 ABC transporter ATP binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Y1U_C1091 ABC transporter ATP binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Y1U_C0149 polar amino acid ABC uptake transporter substrate binding protein/membrane-spanning protein K17073 lysX1; putative lysine transport system substrate-binding protein
D Y1U_C0148 polar amino acid ABC uptake transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D Y1U_C0994 amino acid ABC transporter periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Y1U_C0277 amino acid ABC transporter periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Y1U_C1473 amino acid (glutamine) ABC transporter substrate binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Y1U_C1475 ABC-type amino acid transport system, permease component K02029 ABC.PA.P; polar amino acid transport system permease protein
D Y1U_C1476 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Y1U_C0996 Amino acid (Glutamine) ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D Y1U_C1474 Amino acid (Glutamine) ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C0995 polar amino acid ABC uptake transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Y1U_C1345 oligopeptide binding protein 1 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1347 oligopeptide binding protein 3 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0115 oligopeptide binding protein 2 K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C0160 oligopeptide ABC uptake transporter substrate binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D Y1U_C1344 ABC-type dipeptide/oligopeptide/nickel transport system, permease component K15581 oppB; oligopeptide transport system permease protein
D Y1U_C0165 dipeptide/oligopeptide ABC transporter permeaseed K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0164 hypothetical protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C0163 oligopeptide ABC uptake transporter membrane-spanning proteind K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1343 oligopeptide ABC uptake transporter membrane-binding protein K15582 oppC; oligopeptide transport system permease protein
D Y1U_C1342 oligopeptide ABC uptake transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0168 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0167 dipeptide/oligopeptide ABC transporter ATP binding proteind K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C0166 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component K15583 oppD; oligopeptide transport system ATP-binding protein
D Y1U_C1341 oligopeptide ABC uptake transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Y1U_C1537 ABC transporter ATP binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Y1U_C1004 Zinc ABC transporter substrate binding protein K09815 znuA; zinc transport system substrate-binding protein
D Y1U_C0176 ABC-type Mn2+/Zn2+ transport system, permease component K09816 znuB; zinc transport system permease protein
D Y1U_C0175 zinc (Zn2+) ABC uptake transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Y1U_C0275 ABC-type cobalt transport system, permease component CbiQ-like protein transporter K02008 cbiQ; cobalt/nickel transport system permease protein
D Y1U_C0274 cobalt transport protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Y1U_C0276 ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Y1U_C0652 Biotin synthase K03523 bioY; biotin transport system substrate-specific component
D Y1U_C0291 hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D Y1U_C1718 hypothetical protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D Y1U_C0685 Conserved hypothetical, predicted membrane protein (TMS4) K16927 cbrT; energy-coupling factor transport system substrate-specific component
D Y1U_C1893 ABC transporter membrane-spanning protein K16785 ecfT; energy-coupling factor transport system permease protein
D Y1U_C0293 ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D Y1U_C1895 cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Y1U_C1894 cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Y1U_C0292 ABC-type cobalt transport system, ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Y1U_C1249 ABC-type antimicrobial peptide transport system,permease component K19084 braE; bacitracin transport system permease protein
D Y1U_C1250 ABC-type antimicrobial peptide transport system, ATPase component K19083 braD; bacitracin transport system ATP-binding protein
D Y1U_C0785 cell division ABC transporter permease K09811 ftsX; cell division transport system permease protein
D Y1U_C0784 cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D Y1U_C1231 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D Y1U_C1503 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D Y1U_C1504 ABC transporter ATP binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D Y1U_C1605 ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Y1U_C1369 Polysaccharide export ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Y1U_C0522 ABC transporter membrane-spanning protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Y1U_C1238 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Y1U_C1244 ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Y1U_C1368 polysaccharide ABC exporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Y1U_C1339 ABC transporter ATP binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Y1U_C1606 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Y1U_C0521 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Y1U_C1239 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Y1U_C1245 ABC-type multidrug transport system, ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Y1U_C1288 ABC-type antimicrobial peptide transport system, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D Y1U_C0956 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D Y1U_C1289 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Y1U_C0153 ABC transporter ATP binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Y1U_C1256 multi Antimicrobial extrusion (MATE) family,drug:Na+ antiporter K26939 norM; MATE family, multidrug efflux pump
D Y1U_C1763 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D Y1U_C0942 DNA-damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump
D Y1U_C1291 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D Y1U_C1351 major facilitator superfamily permease K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Y1U_C0599 Multi-drug resistance efflux pump K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D Y1U_C1293 putative transporter K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D Y1U_C1180 phosphoenolpyruvate-protein phosphotransferase (Phosphotransferase system, enzyme I) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Y1U_C1181 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Y1U_C0181 Glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D Y1U_C0180 Glucose-specific phosphotransferase enzyme IIA component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D Y1U_C1624 sucrose PTS component II K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Y1U_C0392 Phosphotransferase system, fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Y1U_C1268 PTS cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D Y1U_C0317 Phosphotransferase system, mannose/fructose-specific component IIA K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Y1U_C0316 Mannose-specific phosphotransferase system component IIC low K02795 manY; mannose PTS system EIIC component
D Y1U_C0315 IIDman K02796 manZ; mannose PTS system EIID component
D Y1U_C1563 glycerol facilitator K02440 glpF; glycerol uptake facilitator
D Y1U_C0476 Ammonium uptake transporter K03320 amt; ammonium transporter, Amt family
D Y1U_C0121 mechanosensitive ion channel MscS K22044 ybiO; moderate conductance mechanosensitive channel
D Y1U_C0266 urea channel K03191 ureI; acid-activated urea channel
D Y1U_C1635 magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D Y1U_C1536 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Y1U_C1418 hypothetical protein K06518 cidA; holin-like protein
D Y1U_C1306 Lactose permease K16209 lacS; lactose/raffinose/galactose permease
D Y1U_C0560 Amino-acid permease RocE K16235 mmuP; S-methylmethionine transporter
D Y1U_C0952 Co/Zn/Cd efflux system component K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Y1U_C1163 GufA-like protein, putative K07238 TC.ZIP; zinc transporter, ZIP family
D Y1U_C1010 glucose uptake permease K05340 glcU; glucose uptake protein
D Y1U_C0453 permease K05786 rarD; chloramphenicol-sensitive protein RarD
D Y1U_C1783 putative glutamate/aspartate-proton symport protein K11102 gltP; proton glutamate symport protein
D Y1U_C0289 serine/threonine:Na+ symporter K07862 sstT; serine/threonine transporter
D Y1U_C1538 NhaP-type Na+/H+ and K+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D Y1U_C0253 K+ transporter (Trk), membrane-spanning protein K03498 trkH; trk/ktr system potassium uptake protein
D Y1U_C0296 K+ transporter (Trk), membrane-spanning protein K03498 trkH; trk/ktr system potassium uptake protein
D Y1U_C0254 K+ transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein
D Y1U_C0295 K+ transporter (Trk), NAD+ binding protein K03499 trkA; trk/ktr system potassium uptake protein
D Y1U_C0501 hypothetical protein K02824 uraA; uracil permease
D Y1U_C0320 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Y1U_C1058 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D Y1U_C1084 Cloride channel-like protein K03281 clcA; chloride channel protein, CIC family
D Y1U_C0810 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D Y1U_C1082 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D Y1U_C0655 metal ion (Mn2+-iron) transporter (Nramp) family protein K03322 mntH; manganese transport protein
D Y1U_C0177 ABC transporter permease protein, putative malate permease K24180 mleP; malate permease and related proteins
D Y1U_C1656 putative branched-chain amino acid permease (Azaleucine resistance) K26605 azlC; branched chain amino acid efflux pump
D Y1U_C1655 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D Y1U_C0256 Riboflavin transporter K23675 fmnP; riboflavin transporter
D Y1U_C1201 hypothetical protein K23675 fmnP; riboflavin transporter
D Y1U_C1465 hypothetical protein K16789 thiT; thiamine transporter
D Y1U_C0982 Conserved hypothetical, predicted membrane protein (TMS5) K16788 niaX; niacin transporter
D Y1U_C0468 cell division protein K03588 ftsW; cell division protein FtsW
D Y1U_C0879 Iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D Y1U_C0877 Periplasmic iron transport lipoprotein, putative K07224 efeO; iron uptake system component EfeO
D Y1U_C0878 Tat translocated dye-type peroxidase family K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D Y1U_C1582 lactococcin A ABC transporter permease K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Y1U_C0816 Eps5D K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Y1U_C0815 EpsC K19420 epsA; protein tyrosine kinase modulator
D Y1U_C0582 Fe2+ transport system protein A K04758 feoA; ferrous iron transport protein A
D Y1U_C0583 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:stw02044]
D Y1U_C0705 hypothetical protein K02221 yggT; YggT family protein
D Y1U_C1456 late competence protein required for DNA binding and uptake K02237 comEA; competence protein ComEA
D Y1U_C1630 late competence protein required for DNA binding and uptake K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Y1U_C1455 putative hydrolase (Metallo-beta-lactamase superfamily) K02238 comEC; competence protein ComEC
D Y1U_C0354 Superfamily II DNA/RNA helicase required for DNA uptake (Late competence protein) K02240 comFA; competence protein ComFA
D Y1U_C0355 putative amidophosphoribosyltransferase K02242 comFC; competence protein ComFC
D Y1U_C1750 Late competence protein, ABC transporter subunit K02243 comGA; competence protein ComGA
D Y1U_C1749 late competence protein, ABC transporter subunit K02244 comGB; competence protein ComGB
D Y1U_C1748 late competence protein exogenous DNA-binding protein K02245 comGC; competence protein ComGC
D Y1U_C1747 competence protein K02246 comGD; competence protein ComGD
D Y1U_C1745 competence protein K02248 comGF; competence protein ComGF
D Y1U_C0691 Prepilin peptidase type IV K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Y1U_C1620 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Y1U_C0206 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Y1U_C0600 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Y1U_C1809 Preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D Y1U_C0983 SRP54, signal recognition particle GTPase protein, putative K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Y1U_C1335 Signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Y1U_C0185 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D Y1U_C1699 preprotein translocase subunit YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C0234 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Y1U_C0881 hypothetical protein K03116 tatA; sec-independent protein translocase protein TatA
D Y1U_C0880 sec-independent protein translocase protein tatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:stw02042]
D Y1U_C0624 Tellurite resistance-like protein permease K11041 eta; exfoliative toxin A/B
D Y1U_C1536 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Y1U_C0551 hemolysin III-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:stw02022]
D Y1U_C0771 sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Y1U_C0770 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D Y1U_C1277 cyclopropane-fatty-acyl-phospholipid synthase K10682 saeR; two-component system, OmpR family, response regulator SaeR
D Y1U_C1251 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Y1U_C1252 DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D Y1U_C1063 sensor protein CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Y1U_C1066 response regulatored K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D Y1U_C0300 Sensor protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Y1U_C0299 TCS response regulator CovR-like protein K18941 arlR; two-component system, OmpR family, response regulator ArlR
D Y1U_C0972 sensor histidine kinase (like protein to spaK Bsu) K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Y1U_C0973 response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D Y1U_C1237 Sensor histidine kinase-like protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D Y1U_C1236 response regulator receiver domain protein K07693 desR; two-component system, NarL family, response regulator DesR
D Y1U_C1325 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D Y1U_C1324 response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D Y1U_C1580 Sensor histidine kinase-like protein K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D Y1U_C1579 response regulator K07707 agrA; two-component system, LytTR family, response regulator AgrA
C 02035 Bacterial motility proteins [BR:stw02035]
D Y1U_C0917 Amino acid ABC superfamily ATP binding cassette transporter, binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C1549 Polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D Y1U_C0282 polar amino acid ABC uptake transporter substrate binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:stw04812]
D Y1U_C0702 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Y1U_C0701 cell division protein K03590 ftsA; cell division protein FtsA
D Y1U_C1910 Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:stw04147]
D Y1U_C0609 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Y1U_C1676 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Y1U_C1670 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Y1U_C1099 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Y1U_C0490 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D Y1U_C0193 molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Y1U_C0110 Hsp70-like protein K04043 dnaK; molecular chaperone DnaK
D Y1U_C0183 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Y1U_C1902 Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Y1U_C0469 elongation factor Tu K02358 tuf; elongation factor Tu
D Y1U_C1505 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Y1U_C1197 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C0619 L-2-hydroxyisocaproate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Y1U_C0279 hypothetical protein K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Y1U_C1808 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Y1U_C1126 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Y1U_C1701 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Y1U_C1702 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Y1U_C1310 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Y1U_C1664 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Y1U_C1422 D-3-phosphoglycerate dehydrogenase, putative K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Y1U_C0035 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Y1U_C0874 acetoin/pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Y1U_C0470 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Y1U_C1108 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:stw02048]
D Y1U_C0930 CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D Y1U_C0634 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D Y1U_C1411 CRISPR-associated Cas1 family protein K15342 cas1; CRISP-associated protein Cas1
D Y1U_C1410 Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Y1U_C0929 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Y1U_C0928 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Y1U_C1412 Csn1 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D Y1U_C0633 CRISPR-system-like protein K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D Y1U_C1409 CRISPR-associated protein, Csn2 family K19137 csn2; CRISPR-associated protein Csn2
D Y1U_C0927 hypothetical protein K07016 csm1; CRISPR-associated protein Csm1
D Y1U_C0926 hypothetical protein K19138 csm2; CRISPR-associated protein Csm2
D Y1U_C0925 CRISPR-associated protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Y1U_C0924 CRISPR-associated protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Y1U_C0923 CRISPR-associated protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Y1U_C0674 type I restriction-modification system restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Y1U_C0677 type-I specificity determinant subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Y1U_C0680 type I restriction-modification system methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Y1U_C1743 hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Y1U_C1795 putative cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0657 Cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Y1U_C0987 Site-specific DNA-methyltransferase (adenine-specific) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Y1U_C0702 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Y1U_C0566 DNA topoisomerase IV (Subunit C) K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Y1U_C0565 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Y1U_C1361 Aminotransferase (Class V), putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Y1U_C0396 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:stw04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:stw01504]
D Y1U_C0690 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Y1U_C0106 D-alanyl-D-alanine-carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Y1U_C0727 D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D Y1U_C0728 Membrane bound O-acyl transferase MBOAT family protein K03739 dltB; membrane protein involved in D-alanine export
D Y1U_C0729 D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D Y1U_C0730 extramembranal protein K03740 dltD; D-alanine transfer protein
D Y1U_C1172 lysyl-tRNA synthetase (class II) K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:stw03100]
D Y1U_Ct001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct019 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct051 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct033 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct035 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Y1U_Ct046 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct057 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Y1U_Ct034 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Y1U_Ct052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Y1U_Ct048 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Y1U_Ct003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Y1U_Ct037 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Y1U_Ct032 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Y1U_Ct030 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Y1U_Ct043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Y1U_Ct055 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Y1U_Ct023 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct047 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct041 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Y1U_Ct016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Y1U_Ct021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Y1U_Ct007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Y1U_Ct029 tRNA-His K14226 tRNA-His; tRNA His
D Y1U_Ct017 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Y1U_Ct022 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Y1U_Ct031 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct045 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Y1U_Ct004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Y1U_Ct038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Y1U_Ct049 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Y1U_Ct014 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct012 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct025 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct011 tRNA-Met K14230 tRNA-Met; tRNA Met
D Y1U_Ct015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Y1U_Ct026 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Y1U_Ct010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Y1U_Ct013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct024 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Y1U_Ct006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Y1U_Ct040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Y1U_Ct054 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Y1U_Ct028 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Y1U_Ct027 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Y1U_Ct042 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Y1U_Ct002 tRNA-Val K14237 tRNA-Val; tRNA Val
D Y1U_Ct020 tRNA-Val K14237 tRNA-Val; tRNA Val
D Y1U_Ct036 tRNA-Val K14237 tRNA-Val; tRNA Val
D Y1U_Cr001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Y1U_Cr002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Y1U_Cr003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Y1U_Cr013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Y1U_C1526 Peptide methionine sulfoxide reductase, putative K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Y1U_C1257 bifunctional methionine sulfoxide reductase A/B protein K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D Y1U_C0715 Glutathione S-transferase family K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D Y1U_C1173 hypothetical protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D Y1U_C0906 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Y1U_C1321 Pyridine nucleotide-disulfide oxidoreductase family protein K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Y1U_C1859 anaerobic ribonucleotide reductase activator K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Y1U_C1535 pyruvate-formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Y1U_C0118 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Y1U_C1442 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D Y1U_C0224 Methyltransferase, N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D Y1U_C1208 transcriptional regulator K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D Y1U_C0646 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Y1U_C0713 lipoprotein involved thiamine biosynthesis K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Y1U_C1761 Peptide chain release factor 3 K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Y1U_C1169 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Y1U_C0645 Serine kinase of the HPr protein, regulates carbohydrat e metabolism K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Y1U_C1088 esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D Y1U_C0814 Eps5B K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Y1U_C1518 hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Y1U_C1886 Signaling protein (Consists of PAS, a modified GGDEF and a DHH family phosphatase domains) K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D Y1U_C1689 Sec-independent protein translocase protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Y1U_C1688 topoisomerase/primase K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D Y1U_C1892 Aggregation promoting factor surface-like protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Y1U_C0413 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Y1U_C0141 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Y1U_C1458 peptidoglycan GlcNAc deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Y1U_C1031 translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Y1U_C0589 putative sugar kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D Y1U_C1018 Cu2+-Cu+-Ag+-P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Y1U_C0779 Cation-transporting ATPase PacL K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Y1U_C0737 Calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Y1U_C1490 Cation-transporting ATPase, E1-E2 family K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D Y1U_C0350 acetoin utilization protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D Y1U_C0793 ferredoxin K05337 fer; ferredoxin
D Y1U_C0156 NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Y1U_C0531 pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D Y1U_C1114 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Y1U_C0406 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D Y1U_C0134 flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D Y1U_C0765 competence associated membrane nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D Y1U_C1194 hypothetical protein K08234 yaeR; glyoxylase I family protein
D Y1U_C0703 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D Y1U_C0861 putative unusual protein kinase K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Y1U_C1019 cold shock protein B K03704 cspA; cold shock protein
D Y1U_C1020 cold shock protein A K03704 cspA; cold shock protein
D Y1U_C0902 transcriptional regulator Spx K16509 spxA; regulatory protein spx
D Y1U_C0059 transcriptional regulator Spx K16509 spxA; regulatory protein spx
D Y1U_C0643 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
D Y1U_C0604 hypothetical protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D Y1U_C0122 trigger factor K03545 tig; trigger factor
D Y1U_C0270 urease accessory protein UreE K03187 ureE; urease accessory protein
D Y1U_C0271 urease accessory protein K03188 ureF; urease accessory protein
D Y1U_C0272 urease accessory protein K03189 ureG; urease accessory protein
D Y1U_C0273 urease accessory protein K03190 ureD; urease accessory protein
D Y1U_C0602 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Y1U_C1186 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D Y1U_C0151 Adapter protein mecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D Y1U_C1365 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Y1U_C1683 DNA recombination protein RmuC-like protein K09760 rmuC; DNA recombination protein RmuC
D Y1U_C1461 hypothetical protein K07461 K07461; putative endonuclease
D Y1U_C0976 Smf family DNA processing protein K04096 smf; DNA processing protein
D Y1U_C1124 DNA replication protein dnaD K02086 dnaD; DNA replication protein
D Y1U_C1850 recombination factor protein RarA K07478 ycaJ; putative ATPase
D Y1U_C0842 transposase K07481 K07481; transposase, IS5 family
D Y1U_C1801 Transposase InsI for insertion sequence element IS30B/C/D K07482 K07482; transposase, IS30 family
D Y1U_C1348 IS-LL6 transposase/hypothetical protein fusion K07483 K07483; transposase
D Y1U_C0839 transposase K07483 K07483; transposase
D Y1U_C0851 IS981 transposase A K07483 K07483; transposase
D Y1U_C0198 IS-LL6 transposase/hypothetical protein fusion K07483 K07483; transposase
D Y1U_C0386 IS981 transposase A K07483 K07483; transposase
D Y1U_C1570 IS3 familytransposase orf1 K07483 K07483; transposase
D Y1U_C0016 Transposase K07483 K07483; transposase
D Y1U_C0036 Transposase K07483 K07483; transposase
D Y1U_C1062 TnpA-IS1253-like protein K07483 K07483; transposase
D Y1U_C0194 Transposase K07483 K07483; transposase
D Y1U_C1298 transposase K07483 K07483; transposase
D Y1U_C0492 IS3 familytransposase orf1 K07483 K07483; transposase
D Y1U_C1353 transposase K07483 K07483; transposase
D Y1U_C0844 transposase K07485 K07485; transposase
D Y1U_C1680 Transposase IS204 K07485 K07485; transposase
D Y1U_C0014 Transposase K07485 K07485; transposase
D Y1U_C0911 transposase K07485 K07485; transposase
D Y1U_C0957 transposase K07485 K07485; transposase
D Y1U_C0089 Transposase IS204 K07485 K07485; transposase
D Y1U_C0116 ed IS1193 transposase K07485 K07485; transposase
D Y1U_C1060 transposase IS204 K07485 K07485; transposase
D Y1U_C1073 Putative transposase, ISSmu2 K07485 K07485; transposase
D Y1U_C0219 Transposase IS204 K07485 K07485; transposase
D Y1U_C1098 Transposase IS204 K07485 K07485; transposase
D Y1U_C1157 transposase K07485 K07485; transposase
D Y1U_C1179 Transposase IS204 K07485 K07485; transposase
D Y1U_C1346 transposase (IS1193) K07485 K07485; transposase
D Y1U_C1840 transposase K07493 K07493; putative transposase
D Y1U_C1841 ed IS1191 transposase K07493 K07493; putative transposase
D Y1U_C0513 Transposase for insertion sequence element IS905 K07493 K07493; putative transposase
D Y1U_C0385 IS981 transposase B K07497 K07497; putative transposase
D Y1U_C0199 hypothetical protein K07497 K07497; putative transposase
D Y1U_C1349 hypothetical protein K07497 K07497; putative transposase
D Y1U_C1297 transposase K07497 K07497; putative transposase
D Y1U_C1352 Transposase K07497 K07497; putative transposase
D Y1U_C0037 IS861, transposase OrfB K07497 K07497; putative transposase
D Y1U_C1000 hypothetical protein K07497 K07497; putative transposase
D Y1U_C0019 Putative transposase, ISSmu1 K07497 K07497; putative transposase
D Y1U_C1571 IS3 familytransposase orf2 K07497 K07497; putative transposase
D Y1U_C0837 ed transposase K07497 K07497; putative transposase
D Y1U_C0848 ed transposase K07497 K07497; putative transposase
D Y1U_C0067 hypothetical protein K07497 K07497; putative transposase
D Y1U_C1056 ISSth1 transposase K07497 K07497; putative transposase
D Y1U_C1061 IS3 familytransposase orf2 K07497 K07497; putative transposase
D Y1U_C0233 Transposase K07497 K07497; putative transposase
D Y1U_C0491 IS3 familytransposase orf2 K07497 K07497; putative transposase
D Y1U_C0379 IS1216 transposase K07498 K07498; putative transposase
D Y1U_C0840 transposase element IS1297 K07498 K07498; putative transposase
D Y1U_C0101 transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D Y1U_C0968 Glyoxylase II family protein K03972 pspE; phage shock protein E
D Y1U_C1493 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Y1U_C0487 D-Serine/D-alanine/glycine:H+ symporter K03293 TC.AAT; amino acid transporter, AAT family
D Y1U_C1262 amino acid transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Y1U_C0919 Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D Y1U_C0909 Na+/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Y1U_C1258 Branched chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D Y1U_C1242 Na+-dependent transporter, putative K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D Y1U_C0225 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D Y1U_C0760 hypothetical protein K06330 cotH; spore coat protein H
D Y1U_C1698 DNA/RNA-binding protein K06346 jag; spoIIIJ-associated protein
D Y1U_C1520 hypothetical protein K06349 kbaA; KinB signaling pathway activation protein
C 99993 Cell motility
C 99995 Signaling proteins
D Y1U_C0696 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D Y1U_C0103 hypothetical protein K07166 K07166; ACT domain-containing protein
D Y1U_C0426 phosphate starvation-induced protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D Y1U_C1572 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D Y1U_C0667 endolysin K07273 acm; lysozyme
C 99994 Others
D Y1U_C0893 phosphate uptake regulatory protein K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Y1U_C0436 competence protein, transcription factor K06198 coiA; competence protein CoiA
D Y1U_C1732 phenylalanyl-tRNA synthetase-like protein K06878 K06878; tRNA-binding protein
D Y1U_C0664 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D Y1U_C0157 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D Y1U_C0154 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D Y1U_C1450 tRNA-processing ribonuclease BN K07058 K07058; membrane protein
D Y1U_C0523 Rhodanese-like domain protein K07146 K07146; UPF0176 protein
D Y1U_C0683 cytoplasmic membrane protein K03744 lemA; LemA protein
D Y1U_C1878 hypothetical protein K01421 yhgE; putative membrane protein
D Y1U_C0640 ABC transporter, substrate-binding protein K08986 ycgQ; putative membrane protein
D Y1U_C1880 hypothetical protein K08987 K08987; putative membrane protein
D Y1U_C1230 hypothetical protein K13256 psiE; protein PsiE
D Y1U_C0997 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D Y1U_C0238 hypothetical protein K06890 K06890; uncharacterized protein
D Y1U_C1690 CoA binding protein K06929 K06929; uncharacterized protein
D Y1U_C1248 Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D Y1U_C0237 hydrolase K06950 K06950; uncharacterized protein
D Y1U_C1440 hypothetical protein K06960 K06960; uncharacterized protein
D Y1U_C0083 putative RNA-binding protein containing a PIN domain K06962 K06962; uncharacterized protein
D Y1U_C1263 putative oxidoreductase nitroreductase-like protein K07078 K07078; uncharacterized protein
D Y1U_C0641 ABC transporter, permease protein, putative K07089 K07089; uncharacterized protein
D Y1U_C0246 hypothetical protein K07095 K07095; uncharacterized protein
D Y1U_C0981 Biotin repressor family transcriptional regulator K07105 K07105; uncharacterized protein
D Y1U_C1731 3-isopropylmalate dehydratase large subunit K07112 K07112; uncharacterized protein
D Y1U_C1128 oxidoreductase, short chain dehydrogenase/reductase K07124 K07124; uncharacterized protein
D Y1U_C1541 hypothetical protein K07139 K07139; uncharacterized protein
D Y1U_C1607 Integral membrane protein K07150 K07150; uncharacterized protein
D Y1U_C0252 hypothetical protein K08998 K08998; uncharacterized protein
D Y1U_C0104 Glycerol-3-phosphate dehydrogenase K09157 K09157; uncharacterized protein
D Y1U_C1227 OsrF K09703 K09703; uncharacterized protein
D Y1U_C0984 DNA-binding protein K09787 K09787; uncharacterized protein
D Y1U_C0773 hypothetical protein K09790 K09790; uncharacterized protein
D Y1U_C0422 RNA-binding protein K00243 K00243; uncharacterized protein
D Y1U_C1860 hypothetical protein K09861 K09861; uncharacterized protein
D Y1U_C0532 hypothetical protein K09962 K09962; uncharacterized protein
D Y1U_C0243 hypothetical protein K09976 K09976; uncharacterized protein
D Y1U_C0359 hypothetical protein K07586 ygaC; uncharacterized protein
D Y1U_C0326 hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024