+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Salmonella enterica subsp. enterica serovar Typhi CT18
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ACRISPR-Cas system
B Universal Cas proteins
C STY3065 CRISPR/Cas system-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C STY3064 ygbF; ssRNA endonuclease K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D STY3070 Cse1 family CRISPR-associated protein K19123 casA; CRISPR system Cascade subunit CasA
D STY3069 CRISPR/Cas system-associated protein Cse2 K19046 casB; CRISPR system Cascade subunit CasB
D STY3068 Cse4 family CRISPR-associated protein K19124 casC; CRISPR system Cascade subunit CasC
D STY3067 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD
D STY3066 CRISPR/Cas system-associated RAMP superfamily protein K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C STY4884 hsdR; subunit R of type I restriction-modification system K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C STY4881 hsdS; subunit S of type I restriction-modification system K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D STY1014 DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STY3667 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STY4636 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STY4312 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HCM1.59 DNA modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D STY3566 yhdJ; adenine-specific DNA-modification methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D HCM1.187c DNA cytosine methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D STY2200 dcm; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
C STY0388 mod; type III restriction-modification system StyLTI enzyme mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
C STY4885 mrr; mrr restriction system protein K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
D HCM1.290c small toxic polypeptide K18921 hokB; protein HokB
D STY2054A mokW; host cell-killing modulation protein K18919 hokC_D; protein HokC/D
C SymE-SymR
D STY4880 yjiW; endoribonuclease SymE K19048 symE; toxic protein SymE
C Ldr-Rdl
D STY4175 small toxic polypeptide LdrD K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
D STY20074a lar; restriction alleviation and modification enhancement protein K19779 ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D STY4789 relE; toxin-antitoxin stability system translational repressor RelE K06218 relE; mRNA interferase RelE/StbE
D STY4788 relB; bifunctional antitoxin/transcriptional repressor RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
D STY0516 hha; hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D HCM1.135 regulatory protein K05839 hha; haemolysin expression modulating protein
D STY0517 ybaJ; Hha toxicity attenuator K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D STY1373 pspC; phage shock protein C K03973 pspC; phage shock protein C
D STY1372 pspB; phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
C ParE-ParD
D STY3093 transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
D STY1031 bacteriophage protein K07341 doc; death on curing protein
C HigB-HigA
D STY3847 ygjN; hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D STY3848 ygjM; transcription regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
D STY3182 hypothetical protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D STY3183 virulence-associated protein VagC K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D STY4806 hypothetical protein K19334 tabA; biofilm protein TabA
D STY1199 biofilm formation regulatory protein BssS K12148 bssS; biofilm regulator BssS
D STY0893 biofilm formation regulatory protein BssR K19688 bssR; biofilm regulator BssR
D STY1254 hypothetical protein K12151 bhsA; multiple stress resistance protein BhsA
D STY0153 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D STY3554 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D STY3351 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D STY3359 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D STY2654 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D STY3203 hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C STY2789 L-cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023