+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Thermococcus barophilus

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D TERMP_01303 rRNA biogenesis Nop5/Nop56-like protein K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D TERMP_00124 tRNA pseudouridine 55 synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D TERMP_00377 ribosome biogenesis Nop10-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins D TERMP_00167 brix-domain ribosomal biogenesis protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 C Helicases C GTPase C RNase C Kinase C Other 90S particles D TERMP_00041 N1-specific pseudouridine methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D TERMP_00500 RNA-binding protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D TERMP_00501 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D TERMP_00949 hypothetical protein K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D TERMP_00572 AMP/CMP kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] C Other pre-40S particles D TERMP_00675 RNase L inhibitor K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D TERMP_00703 GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E TERMP_00100 ribonuclease P protein component 1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E TERMP_00159 ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E TERMP_00156 ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases D TERMP_02001 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D TERMP_01090 eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D TERMP_02183 hypothetical protein K07562 NMD3; 60S ribosomal export protein NMD3 D TERMP_00161 hypothetical protein K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D TERMP_01274 cell division FtsH-like protein K13525 VCP; transitional endoplasmic reticulum ATPase D TERMP_01112 cell division protein FtsH K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles D TERMP_01709 predicted RNA-binding protein involved in ribosomal biogenesis K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 B Other ribosome biogenesis factors C TERMP_00798 GTP-binding Era-like protein K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D TERMP_01303 rRNA biogenesis Nop5/Nop56-like protein K14564 NOP56; nucleolar protein 56 D TERMP_01302 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D TERMP_01118 LSU ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D TERMP_00124 tRNA pseudouridine 55 synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D TERMP_00822 gar1-like small nucleolar rnp K07569 gar1; RNA-binding protein D TERMP_00377 ribosome biogenesis Nop10-like protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C TERMP_00245 NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D TERMP_00391 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D TERMP_01003 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D TERMP_01622 tRNA/RNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] C 23S rRNA modification factors D TERMP_01666 LSU methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D TERMP_01125 TrmA-like RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] B ribosomal protein modification factors C TERMP_00920 ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] B rRNA processing factors B rRNA helicases C TERMP_01196 cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C TERMP_00798 GTP-binding Era-like protein K03595 era; GTPase C TERMP_01562 GTP-binding HflX-like protein K03665 hflX; GTPase B Other maturation factors C TERMP_01070 putative YrdC/Sua5 protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C TERMP_01094 hypothetical protein K07574 yhbY; RNA-binding protein C TERMP_00325 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase C TERMP_00932 hypothetical protein K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024