+D GENES KO #

  KEGG Orthology (KO) - Thermococcus cleftensis

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:thm00010] D CL1_0471 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CL1_1657 ADP-specific phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D CL1_0470 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D CL1_1806 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CL1_1205 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D CL1_1083 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CL1_0086 putative glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D CL1_1680 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CL1_0248 putative cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CL1_0587 enolase-like protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1117 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1896 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CL1_0508 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CL1_0009 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0012 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 2 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0008 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_0011 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_1587 acetyl-CoA synthetase I (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1416 acetyl-CoA synthetase II (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1667 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1036 succinyl-CoA synthetase large subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1666 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D CL1_0374 acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CL1_1206 aldehyde: ferredoxin oxidoreductase 2 K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6] D CL1_0413 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:thm00020] D CL1_0009 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0012 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 2 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0008 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_0011 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_0007 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 1 K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D CL1_0010 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 2 K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D CL1_0013 2-oxoglutarate ferredoxin oxidoreductase subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D CL1_1262 fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CL1_1263 fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CL1_1805 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CL1_0413 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:thm00030] D CL1_0471 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CL1_0535 ribose-5-phosphate isomerase, type A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CL1_0365 bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D CL1_1119 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CL1_0891 phosphopentomutase K22199 ppm; phosphopentomutase [EC:5.4.2.7] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CL1_1233 hypothetical protein containing ribokinase-like domain 2 K21056 E2.7.1.212; alpha-D-ribose-1-phosphate 5-kinase (ADP) [EC:2.7.1.212] D CL1_1398 ribose-1,5-Bisphosphate Isomerase K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29] D CL1_1324 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CL1_0239 aldehyde: ferredoxin oxidoreductase 1 K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D CL1_1348 tungsten-containing aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D CL1_1933 putative aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D CL1_1806 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CL1_1205 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D CL1_1657 ADP-specific phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D CL1_0470 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] C 00040 Pentose and glucuronate interconversions D CL1_1185 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:thm00051] D CL1_0469 bifunctional mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CL1_0109 putative sugar-phosphate nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CL1_0414 putative mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CL1_1185 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D CL1_1806 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CL1_1205 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D CL1_1083 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:thm00052] D CL1_1379 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CL1_0841 putative UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CL1_1795 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:thm00500] D CL1_0882 glycogen synthase K20812 glgA; glycogen synthase [EC:2.4.1.242] D CL1_0546 glycogen branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CL1_0412 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CL1_1040 cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D CL1_0091 pullulanase type II K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CL1_0884 cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D CL1_0972 4-alpha-Glucanotransferase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D CL1_1275 cyclomaltodextrin glucanotransferase K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CL1_0471 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:thm00520] D CL1_1905 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CL1_1284 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CL1_0291 sugar-phosphate nucleotidyltransferase 1 K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] D CL1_0184 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CL1_0183 putative UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CL1_0824 hypothetical protein containing Trimeric LpxA-like domain K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201] D CL1_0830 UDP-n-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CL1_1379 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CL1_0841 putative UDP-or dTTP-glucose 4-epimerase or 4-6-dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CL1_1795 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CL1_0471 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CL1_0109 putative sugar-phosphate nucleotidyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CL1_0414 putative mannose-1-phosphate guanylyltransferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CL1_0469 bifunctional mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D CL1_0825 Pleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT) K13010 per; perosamine synthetase [EC:2.6.1.102] C 00620 Pyruvate metabolism [PATH:thm00620] D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CL1_0009 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0012 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 2 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0008 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_0011 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_1896 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CL1_1231 acylphosphatase-like protein K01512 acyP; acylphosphatase [EC:3.6.1.7] D CL1_1587 acetyl-CoA synthetase I (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1416 acetyl-CoA synthetase II (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1667 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1036 succinyl-CoA synthetase large subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1666 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D CL1_0374 acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D CL1_1761 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CL1_1264 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CL1_0657 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CL1_1805 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CL1_1262 fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CL1_1263 fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CL1_0413 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CL1_0508 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:thm00630] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CL1_1611 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D CL1_1609 methylmalonyl-CoA mutase, C-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D CL1_1571 methylmalonyl-CoA mutase, alpha chain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D CL1_1749 glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D CL1_0118 2-hydroxyacid dehydrogenase-like protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26] D CL1_0354 putative phosphoglycolate phosphatase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D CL1_1487 ribulose bisophosphate carboxylase K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D CL1_0909 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CL1_1869 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CL1_0436 putative glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CL1_0437 putative glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CL1_1227 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CL1_1436 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CL1_1147 hypothetical protein containing ferredoxins domain 3 K00124 fdoH; formate dehydrogenase iron-sulfur subunit C 00640 Propanoate metabolism [PATH:thm00640] D CL1_1587 acetyl-CoA synthetase I (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1416 acetyl-CoA synthetase II (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1667 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1036 succinyl-CoA synthetase large subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1666 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D CL1_0374 acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CL1_1122 4-aminobutyrate aminotransferase 2 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_0205 4-aminobutyrate aminotransferase 1 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_1611 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D CL1_1609 methylmalonyl-CoA mutase, C-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D CL1_1571 methylmalonyl-CoA mutase, alpha chain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] C 00650 Butanoate metabolism [PATH:thm00650] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CL1_0657 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CL1_0656 putative methylmalonyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CL1_0655 methylmalonyl-CoA decarboxylase subunit delta K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CL1_1658 putative maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1] D CL1_1122 4-aminobutyrate aminotransferase 2 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_0205 4-aminobutyrate aminotransferase 1 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CL1_0009 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0012 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 2 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0008 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_0011 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_1403 putative 3-hydroxy-3-methylglutaryl CoA synthase-like protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D CL1_1427 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism D CL1_1427 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00562 Inositol phosphate metabolism [PATH:thm00562] D CL1_1647 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CL1_1474 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CL1_1475 glucose-1-phosphate thymidylyltransferase-like protein K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34] D CL1_1083 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:thm00190] D CL1_0200 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D CL1_0201 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D CL1_0640 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CL1_0639 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CL1_0198 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D CL1_0202 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D CL1_0197 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D CL1_0196 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CL1_0930 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CL1_0929 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CL1_0932 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D CL1_0928 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CL1_0933 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CL1_0931 V-type ATP synthase subunit F K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D CL1_0936 V-type ATP synthase subunit H K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D CL1_0935 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CL1_0934 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CL1_0757 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:thm00720] D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CL1_0508 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CL1_1805 pyruvate carboxylase subunit B K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D CL1_1262 fumarate hydratase subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D CL1_1263 fumarate hydratase subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CL1_0009 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 1 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0012 2-oxoglutarate ferredoxin oxidoreductase subunit alpha 2 K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D CL1_0008 2-oxoglutarate ferredoxin oxidoreductase subunit beta 1 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_0011 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2 K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D CL1_0007 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 1 K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D CL1_0010 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 2 K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D CL1_0013 2-oxoglutarate ferredoxin oxidoreductase subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D CL1_1611 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D CL1_1571 methylmalonyl-CoA mutase, alpha chain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D CL1_1609 methylmalonyl-CoA mutase, C-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] C 00680 Methane metabolism [PATH:thm00680] D CL1_1147 hypothetical protein containing ferredoxins domain 3 K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CL1_1148 formate hydrogen lyase subunit alpha K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6] D CL1_0794 formate dehydrogenase subunit alpha FdhA K22516 fdhA; formate dehydrogenase (coenzyme F420) alpha subunit [EC:1.17.98.3 1.8.98.6] D CL1_1869 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CL1_0587 enolase-like protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1117 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1806 fructose 1,6-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CL1_1205 fructose-1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D CL1_1657 ADP-specific phosphofructokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D CL1_0470 ADP-dependent glucokinase K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147] D CL1_0365 bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde lyase/phosphohexuloisomerase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D CL1_1151 coenzyme F420 hydrogenase subunit alpha (frhA) K00440 frhA; coenzyme F420 hydrogenase subunit alpha [EC:1.12.98.1] D CL1_1149 coenzyme F420-reducing hydrogenase subunit beta K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D CL1_1150 coenzyme F420 hydrogenase subunit gamma (frhG) K00443 frhG; coenzyme F420 hydrogenase subunit gamma [EC:1.12.98.1] D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D CL1_0508 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CL1_0248 putative cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CL1_1261 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CL1_1528 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CL1_0978 tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00910 Nitrogen metabolism [PATH:thm00910] D CL1_0542 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CL1_0909 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CL1_1359 glutamate synthase small subunit-like protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CL1_1144 putative glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CL1_1439 putative oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CL1_1208 carbamate kinase-like carbamoyl phosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00920 Sulfur metabolism [PATH:thm00920] D CL1_0982 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D CL1_0988 putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D CL1_1736 hypothetical protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CL1_0642 sulfhydrogenase II, gamma chain K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4] D CL1_0142 cytosolic NiFe-hydrogenase subunit gamma K17995 hydG; sulfhydrogenase subunit gamma (sulfur reductase) [EC:1.12.98.4] D CL1_0641 sulfhydrogenase II, beta chain K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4] D CL1_0141 cytosolic NiFe-hydrogenase subunit beta K17996 hydB; sulfhydrogenase subunit beta (sulfur reductase) [EC:1.12.98.4] D CL1_0144 cytosolic NiFe-hydrogenase subunit alpha K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5] D CL1_0644 sulfhydrogenase II, alpha chain K17993 hydA; sulfhydrogenase subunit alpha [EC:1.12.1.3 1.12.1.5] D CL1_0143 cytosolic NiFe-hydrogenase subunit delta K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5] D CL1_0643 sulfhydrogenase II, delta chain K17994 hydD; sulfhydrogenase subunit delta [EC:1.12.1.3 1.12.1.5] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:thm00061] D CL1_1998 glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:thm00071] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism C 00564 Glycerophospholipid metabolism [PATH:thm00564] D CL1_0424 anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CL1_0421 glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CL1_0422 glycerophosphoryl diester phosphodiesterase 2 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CL1_1645 NAD(P)-dependent glycerol-1-phosphate dehydrogenase K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261] D CL1_1622 geranylgeranylglyceryl phosphate synthase-like protein K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D CL1_1374 hypothetical protein K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D CL1_0718 prenyltransferase UbiA-like protein K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D CL1_1098 hypothetical protein K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D CL1_0388 geranylgeranyl hydrogenase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:thm00230] D CL1_0891 phosphopentomutase K22199 ppm; phosphopentomutase [EC:5.4.2.7] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CL1_1324 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CL1_0793 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CL1_0785 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CL1_0787 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CL1_0781 phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain protein K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CL1_0783 phosphoribosylformylglycinamidine (FGAM) synthase, PurS component K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CL1_0782 phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain protein K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CL1_0788 Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CL1_0786 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CL1_0039 putative phosphoribosylaminoimidazole-succinocarboxamide (SAICAR) synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CL1_0792 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CL1_1777 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CL1_0040 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase 1 K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D CL1_0780 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase 2 K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D CL1_0784 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase 3 K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D CL1_0041 putative Inosine monophosphate cyclohydrolase K11176 purO; IMP cyclohydrolase [EC:3.5.4.10] D CL1_0017 putative stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CL1_0803 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CL1_1744 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CL1_1106 HamI-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CL1_0776 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CL1_0779 GMP synthase subunit B K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CL1_0573 5'-methylthioadenosine phosphorylase K26211 K26211; guanosine phosphorylase [EC:2.4.2.15] D CL1_0862 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CL1_0818 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CL1_0298 putative adenylate cyclase 1 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D CL1_2037 putative adenylate cyclase 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D CL1_1796 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CL1_1626 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D CL1_0603 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_0540 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_1899 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_0125 putative kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D CL1_1773 hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D CL1_0249 hypothetical protein containing Histidine triad-like motif K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CL1_0673 hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CL1_0988 putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D CL1_0982 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D CL1_1208 carbamate kinase-like carbamoyl phosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:thm00240] D CL1_1294 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CL1_1293 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CL1_0918 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CL1_1365 putative dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D CL1_0919 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D CL1_1199 putative orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CL1_1472 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CL1_1372 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CL1_1744 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CL1_1607 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CL1_0349 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CL1_0600 putative cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CL1_0017 putative stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CL1_0571 uridine phosphorylase (udp) K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CL1_0511 putative uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CL1_1013 hypothetical protein containing ribokinase-like domain 1 K21057 E2.7.1.213; cytidine kinase [EC:2.7.1.213] D CL1_1626 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D CL1_0818 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CL1_0405 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CL1_0862 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CL1_1344 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CL1_0416 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CL1_1488 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D CL1_0251 putative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CL1_0744 putative carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:thm00250] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_0800 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CL1_1883 putative aspartate racemase 1 K01779 racD; aspartate racemase [EC:5.1.1.13] D CL1_2035 putative aspartate racemase 2 K01779 racD; aspartate racemase [EC:5.1.1.13] D CL1_1333 L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CL1_1601 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CL1_0496 putative aminotransferase 3 K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12] D CL1_0451 putative aminotransferase 2 K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CL1_1796 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CL1_1777 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CL1_1294 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CL1_1293 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CL1_1122 4-aminobutyrate aminotransferase 2 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_0205 4-aminobutyrate aminotransferase 1 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_1359 glutamate synthase small subunit-like protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CL1_1144 putative glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CL1_1439 putative oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CL1_0542 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CL1_0909 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CL1_0782 phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain protein K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CL1_1905 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CL1_0793 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:thm00260] D CL1_0659 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CL1_1302 threonine synthase 2 K01733 thrC; threonine synthase [EC:4.2.3.1] D CL1_0537 threonine synthase 1 K01733 thrC; threonine synthase [EC:4.2.3.1] D CL1_1869 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CL1_0248 putative cofactor-independent phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CL1_1261 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CL1_1528 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CL1_1311 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CL1_0343 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D CL1_0436 putative glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CL1_0437 putative glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CL1_1227 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CL1_1436 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00270 Cysteine and methionine metabolism [PATH:thm00270] D CL1_0126 archaeal S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CL1_0940 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CL1_1423 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CL1_1047 purine phosphorylase family 2 related protein K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D CL1_1045 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CL1_1713 hypothetical protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D CL1_1772 translation initiation factor IF-2B subunit beta K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D CL1_1080 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1491 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1545 SAM-dependent methyltransferase 2 K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-] D CL1_1522 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CL1_0659 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CL1_0387 ferredoxin K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_0496 putative aminotransferase 3 K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12] D CL1_1261 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CL1_0055 chromosome partitioning protein ParB-like protein K23370 serK; L-serine kinase (ADP) [EC:2.7.1.226] C 00280 Valine, leucine and isoleucine degradation [PATH:thm00280] D CL1_1247 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha K00186 vorA; 2-oxoisovalerate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.7] D CL1_1246 2-ketoisovalerate ferredoxin oxidoreductase subunit beta K00187 vorB; 2-oxoisovalerate ferredoxin oxidoreductase beta subunit [EC:1.2.7.7] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1248 2-ketoisovalerate ferredoxin oxidoreductase subunit delta K00188 vorD; 2-oxoisovalerate ferredoxin oxidoreductase delta subunit [EC:1.2.7.7] D CL1_1611 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D CL1_1609 methylmalonyl-CoA mutase, C-terminal domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D CL1_1571 methylmalonyl-CoA mutase, alpha chain K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CL1_1403 putative 3-hydroxy-3-methylglutaryl CoA synthase-like protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:thm00290] D CL1_1427 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CL1_0451 putative aminotransferase 2 K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] C 00300 Lysine biosynthesis [PATH:thm00300] D CL1_0659 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CL1_0896 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CL1_1265 putative metallopeptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CL1_1397 putative aminotransferase 4 K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-] C 00310 Lysine degradation D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:thm00220] D CL1_0254 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CL1_0782 phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain protein K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CL1_0909 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CL1_0542 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CL1_1208 carbamate kinase-like carbamoyl phosphate synthetase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_0451 putative aminotransferase 2 K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CL1_1762 putative acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:thm00330] D CL1_1425 pyruvoyl-dependent arginine decarboxylase K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D CL1_0366 putative arginase K01480 speB; agmatinase [EC:3.5.3.11] D CL1_0263 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D CL1_1423 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D CL1_0940 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:thm00340] D CL1_1828 ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CL1_1829 ATP phosphoribosyltransferase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D CL1_1822 hypothetical protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D CL1_1824 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D CL1_1825 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CL1_1823 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CL1_1826 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CL1_1821 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_2024 putative aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_1827 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:thm00350] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_1821 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_2024 putative aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_0978 tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00360 Phenylalanine metabolism [PATH:thm00360] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_1821 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_2024 putative aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:thm00400] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_1821 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_2024 putative aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:thm00410] D CL1_0978 tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D CL1_1122 4-aminobutyrate aminotransferase 2 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_0205 4-aminobutyrate aminotransferase 1 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_1361 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D CL1_0744 putative carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D CL1_1558 hypothetical protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:thm00450] D CL1_0492 putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CL1_1123 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CL1_1996 putative pyridine nucleotide-disulfide oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CL1_0982 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D CL1_0110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:thm00460] D CL1_1333 L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CL1_1869 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:thm00470] D CL1_0782 phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain protein K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CL1_1883 putative aspartate racemase 1 K01779 racD; aspartate racemase [EC:5.1.1.13] D CL1_2035 putative aspartate racemase 2 K01779 racD; aspartate racemase [EC:5.1.1.13] C 00480 Glutathione metabolism [PATH:thm00480] D CL1_1641 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CL1_1643 allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D CL1_1423 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis [PATH:thm00552] D CL1_0290 hypothetical protein containing Bacitracin resistance domain K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:thm00543] D CL1_0049 glycosyl transferase family 2 protein 1 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:thm00730] D CL1_0038 putative thiamine biosynthesis protein K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CL1_0035 putative phosphomethylpyrimidine kinase K21219 thiDN; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D CL1_1661 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CL1_1663 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CL1_0036 ribulose-1,5-biphosphate synthetase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D CL1_0270 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CL1_1773 hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D CL1_0603 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_0540 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_1899 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:thm00740] D CL1_0043 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein for riboflavin biosynthesis K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CL1_0045 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CL1_0042 putative 6,7-dimethyl-8-ribityllumazine synthase for riboflavin biosynthesis K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CL1_0044 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CL1_0129 putative transcription regulator, MarR family 1 K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D CL1_1470 glycerol-3-phosphate cytidylyltransferase K14656 ribL; FAD synthetase [EC:2.7.7.2] D CL1_2039 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:thm00750] D CL1_1302 threonine synthase 2 K01733 thrC; threonine synthase [EC:4.2.3.1] D CL1_0537 threonine synthase 1 K01733 thrC; threonine synthase [EC:4.2.3.1] D CL1_0796 pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D CL1_0795 glutamine amidotransferase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:thm00760] D CL1_0800 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CL1_0799 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CL1_0797 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CL1_1355 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CL1_0017 putative stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CL1_1539 archaeal nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D CL1_0911 putative NAD synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CL1_0684 pyrazinamidase/nicotinamidase-like protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CL1_1871 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CL1_1089 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CL1_1658 putative maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1] C 00770 Pantothenate and CoA biosynthesis [PATH:thm00770] D CL1_1427 hypothetical protein K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CL1_1972 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CL1_1259 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CL1_1196 GHMP kinase 2 K06982 pok; pantoate kinase [EC:2.7.1.169] D CL1_1361 hypothetical protein K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D CL1_1885 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CL1_1084 phosphopantetheine adenylyltransferase K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CL1_1290 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CL1_0760 hypothetical protein K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D CL1_0744 putative carbon-nitrogen hydrolase K01431 UPB1; beta-ureidopropionase [EC:3.5.1.6] D CL1_0978 tyrosine decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:thm00780] D CL1_1998 glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CL1_1807 biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:thm00785] D CL1_1115 hypothetical protein containing radical SAM domain K09711 lipS1; lipoyl synthase D CL1_1335 hypothetical protein K24689 lipS2; lipoyl synthase D CL1_1181 lipoate-protein ligase A related protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CL1_0436 putative glycine dehydrogenase subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2] D CL1_0437 putative glycine dehydrogenase subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2] D CL1_1227 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CL1_1436 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:thm00790] D CL1_0329 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CL1_0043 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein for riboflavin biosynthesis K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CL1_1780 putative 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CL1_0225 hypothetical protein containing SAM domain 2 K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CL1_1364 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CL1_1922 GTP cyclohydrolase K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39] D CL1_1560 hypothetical protein K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CL1_0331 GHMP kinase 1 K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D CL1_0289 hypothetical protein containing metallo-hydrolase/oxidoreductase domain K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D CL1_0002 6-pyruvoyl-tetrahydropterin synthase K22102 E4.1.2.59; dihydroneopterin phosphate aldolase [EC:4.1.2.59] D CL1_1317 molybdenum cofactor biosynthesis protein A2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CL1_1982 putative molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CL1_1102 molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CL1_2011 molybdenum cofactor biosynthesis protein MoeB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CL1_1592 molybdenum cofactor biosynthesis protein 1, MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CL1_2010 molybdenum cofactor biosynthesis protein 2, MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CL1_0484 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:thm00670] D CL1_1869 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CL1_1227 glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CL1_0251 putative thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:thm00860] D CL1_0410 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CL1_0082 cobalamin adenosyltransferase like protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CL1_1183 putative cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CL1_2014 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D CL1_2023 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CL1_2012 putative adenosylcobinamide amidohydrolase K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D CL1_2016 hypothetical protein K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62] D CL1_2019 putative cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis D CL1_2039 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:thm00900] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CL1_1403 putative 3-hydroxy-3-methylglutaryl CoA synthase-like protein K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D CL1_0345 arcaheal type Hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34] D CL1_0569 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D CL1_0568 aspartate/glutamate/uridylate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D CL1_0165 hypothetical protein K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D CL1_0166 hypothetical protein K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D CL1_0336 hypothetical protein K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D CL1_2039 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CL1_0566 isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CL1_0563 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CL1_0304 undecaprenyl pyrophosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D CL1_0840 sugar-phosphate nucleotidyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CL1_0291 sugar-phosphate nucleotidyltransferase 1 K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 01054 Nonribosomal peptide structures [PATH:thm01054] D CL1_1883 putative aspartate racemase 1 K01779 racD; aspartate racemase [EC:5.1.1.13] D CL1_2035 putative aspartate racemase 2 K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis D CL1_0982 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:thm00521] D CL1_0467 putative phospho-sugar mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D CL1_1474 myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CL1_1647 bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CL1_0840 sugar-phosphate nucleotidyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CL1_0291 sugar-phosphate nucleotidyltransferase 1 K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis D CL1_0840 sugar-phosphate nucleotidyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CL1_0291 sugar-phosphate nucleotidyltransferase 1 K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276] C 00401 Novobiocin biosynthesis [PATH:thm00401] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_1821 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_2024 putative aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CL1_1998 glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites D CL1_0126 archaeal S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:thm00362] D CL1_0657 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CL1_0656 putative methylmalonyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CL1_0655 methylmalonyl-CoA decarboxylase subunit delta K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:thm00627] D CL1_1231 acylphosphatase-like protein K01512 acyP; acylphosphatase [EC:3.6.1.7] D CL1_2039 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation D CL1_1534 HAD-superfamily hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation D CL1_1534 HAD-superfamily hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation D CL1_1244 pyruvate ferredoxin oxidoreductase subunit alpha K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D CL1_1243 pyruvate ferredoxin oxidoreductase subunit beta K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D CL1_1249 pyruvate/ketoisovalerate ferredoxin oxidoreductase subunit gamma K00189 vorG; 2-oxoisovalerate/pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.7 1.2.7.1] D CL1_1245 pyruvate ferredoxin oxidoreductase subunit delta K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:thm03020] D CL1_0440 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D CL1_0441 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D CL1_0442 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D CL1_0593 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D CL1_0311 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D CL1_0758 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D CL1_0282 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D CL1_0439 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D CL1_0588 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D CL1_0589 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D CL1_0229 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:thm03022] D CL1_1484 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D CL1_1584 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D CL1_1411 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D CL1_1235 transcription initiation factor E subunit alpha K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D CL1_1649 putative Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:thm03010] D CL1_0586 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CL1_0622 30S ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CL1_0595 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CL1_0607 30S ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CL1_0446 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CL1_0612 30S ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CL1_0590 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CL1_1932 30S ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CL1_0594 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CL1_0445 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CL1_0596 30S ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CL1_0613 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CL1_0163 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CL1_0618 30S ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D CL1_0624 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CL1_0160 30S ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D CL1_0615 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D CL1_0724 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D CL1_0347 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D CL1_1490 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D CL1_1578 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D CL1_0761 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D CL1_0458 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D CL1_0762 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D CL1_1742 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D CL1_0401 50S ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D CL1_0625 50S ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CL1_0628 50S ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CL1_0614 50S ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CL1_0611 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CL1_0402 acidic ribosomal protein P0/50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CL1_0400 50S ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CL1_0403 50S ribosomal protein L12a (P1/P2) K02869 RP-L12; large subunit ribosomal protein L12 D CL1_0591 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CL1_0617 50S ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CL1_0605 50S ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CL1_0608 50S ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CL1_0623 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CL1_0626 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CL1_0616 50S ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CL1_0621 50S ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D CL1_0606 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CL1_0627 50S ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D CL1_1741 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D CL1_0631 50S ribosomal protein L10E K02866 RP-L10e; large subunit ribosomal protein L10e D CL1_0599 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D CL1_0556 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D CL1_0592 ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D CL1_0609 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D CL1_0283 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D CL1_1743 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D CL1_0443 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D CL1_1573 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D CL1_0610 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D CL1_0601 ribosomal protein L34Ae K02915 RP-L34e; large subunit ribosomal protein L34e D CL1_0099 50S ribosomal protein L35Ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D CL1_0093 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D CL1_0228 50S ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D CL1_1572 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D CL1_0585 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D CL1_0457 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D CL1_1575 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D CL1_r0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CL1_r0003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CL1_r0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CL1_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:thm00970] D CL1_t0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CL1_t0033 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CL1_t0034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CL1_t0043 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CL1_t0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CL1_t0013 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CL1_t0028 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CL1_t0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CL1_t0046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CL1_t0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CL1_t0016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CL1_t0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CL1_t0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CL1_t0029 tRNA-His K14226 tRNA-His; tRNA His D CL1_t0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CL1_t0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CL1_t0041 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CL1_t0002 tRNA-Met K14230 tRNA-Met; tRNA Met D CL1_t0042 tRNA-Met K14230 tRNA-Met; tRNA Met D CL1_t0011 tRNA-Met K14230 tRNA-Met; tRNA Met D CL1_t0038 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CL1_t0006 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CL1_t0019 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CL1_t0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CL1_t0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CL1_t0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CL1_t0007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CL1_t0031 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CL1_t0030 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CL1_t0004 tRNA-Val K14237 tRNA-Val; tRNA Val D CL1_t0001 tRNA-Val K14237 tRNA-Val; tRNA Val D CL1_t0036 tRNA-Val K14237 tRNA-Val; tRNA Val D CL1_0410 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CL1_0286 glutamyl-tRNA(Gln) amidotransferase subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D CL1_0287 glutamyl-tRNA(Gln) amidotransferase subunit E K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D CL1_0957 alanyl-tRNA synthetase 2 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_0927 alanyl-tRNA synthetase 1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_1300 alanyl-tRNA synthetase-like protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_1810 hypothetical protein containing alanyl tRNA synthase domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_0358 aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D CL1_1712 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CL1_0636 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CL1_0090 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CL1_0307 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CL1_1593 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CL1_0029 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CL1_0110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CL1_2026 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CL1_0558 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CL1_0874 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CL1_1329 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D CL1_0179 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CL1_0119 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CL1_0963 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CL1_0342 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CL1_0339 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CL1_1689 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CL1_1035 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:thm03060] D CL1_0604 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CL1_0938 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CL1_0939 putative preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CL1_0576 signal recognition particle protein SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CL1_0019 signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CL1_0398 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D CL1_1444 signal recognition particle protein SRP19 K03105 SRP19; signal recognition particle subunit SRP19 D CL1_1802 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CL1_1155 putative signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D CL1_1180 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D CL1_0754 signal peptidase I, S26B family K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:thm04122] D CL1_1102 molybdopterin converting factor subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CL1_1317 molybdenum cofactor biosynthesis protein A2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CL1_1099 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D CL1_1901 molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein D CL1_1100 hypothetical protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CL1_1982 putative molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CL1_2011 molybdenum cofactor biosynthesis protein MoeB K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CL1_1661 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CL1_1663 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CL1_0449 putative sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D CL1_1564 hypothetical protein containing JAB1/MPN domain K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome [PATH:thm03050] D CL1_1339 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit D CL1_0671 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D CL1_1304 proteasome subunit beta 2 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D CL1_0539 proteasome subunit beta 1 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:thm03018] D CL1_0309 hypothetical protein containing nucleic acid -binding domain K07573 CSL4; exosome complex component CSL4 D CL1_0669 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D CL1_0667 exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42 D CL1_0668 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D CL1_0587 enolase-like protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1117 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1618 DEAD-like helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CL1_1075 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CL1_0565 hypothetical protein containing metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] B B 09124 Replication and repair C 03030 DNA replication [PATH:thm03030] D CL1_0409 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CL1_1910 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CL1_0698 DNA polymerase, family B K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D CL1_1059 DNA polymerase II small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D CL1_1060 DNA polymerase II large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D CL1_0652 cell division control protein, MCM family K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D CL1_0904 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D CL1_0903 DNA primase large subunit K18882 priL; DNA primase large subunit D CL1_1865 DNA polymerase sliding clamp protein K04802 PCNA; proliferating cell nuclear antigen D CL1_1313 replication factor C small subunit K04801 rfcS; replication factor C small subunit D CL1_1314 replication factor C large subunit K04800 rfcL; replication factor C large subunit D CL1_1585 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CL1_1197 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:thm03410] D CL1_1673 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CL1_1494 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CL1_1081 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CL1_1865 DNA polymerase sliding clamp protein K04802 PCNA; proliferating cell nuclear antigen D CL1_1585 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CL1_1197 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D CL1_1633 putative DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CL1_2022 putative uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CL1_1194 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CL1_0706 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CL1_0162 recJ-like single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:thm03420] D CL1_1649 putative Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CL1_1865 DNA polymerase sliding clamp protein K04802 PCNA; proliferating cell nuclear antigen D CL1_1197 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:thm03430] D CL1_1985 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2 D CL1_0162 recJ-like single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CL1_1865 DNA polymerase sliding clamp protein K04802 PCNA; proliferating cell nuclear antigen D CL1_1197 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination D CL1_0162 recJ-like single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03450 Non-homologous end-joining D CL1_1585 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D CL1_0759 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D CL1_0399 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:thm02010] D CL1_1512 molybdate/tungstate ABC transporter periplasmic substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D CL1_1513 molybdate/tungstate ABC type transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein D CL1_1514 molybdate/tungstate ABC type transporter ATPase K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D CL1_1687 iron(III) ABC transporter periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D CL1_1686 iron(III) ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CL1_1685 iron(III) ABC transporter ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CL1_1711 thiamine ABC transporter periplasmic binding protein K02064 thiB; thiamine transport system substrate-binding protein D CL1_0708 ABC type iron(III) transporter permease K02063 thiP; thiamine transport system permease protein D CL1_0709 ABC type sugar transporter ATPase K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CL1_0889 maltooligosaccharide transport system ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CL1_0885 maltooligosaccharide transport system substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CL1_0886 maltooligosaccharide transport system permease protein 1 K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CL1_0887 maltooligosaccharide transport system permease protein 2 K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CL1_0021 membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D CL1_0023 ABC type sugar transporter permease 1 K23535 nupB; general nucleoside transport system permease protein D CL1_0024 ABC type sugar transporter permease 2 K23536 nupC; general nucleoside transport system permease protein D CL1_0022 ABC type transporter ATPase 1 K23537 nupA; general nucleoside transport system ATP-binding protein D CL1_0463 cobalt ABC transport protein, CbiN K02009 cbiN; cobalt/nickel transport protein D CL1_0462 cobalt ABC transporter permease, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D CL1_0464 cobalt ABC transporter permease 1, CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CL1_0465 cobalt ABC transporter ATPase 1 K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CL1_1697 putative biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D CL1_1695 cobalt ABC transporter permease 2, CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D CL1_0296 cobalt transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CL1_1696 cobalt ABC transporter ATPase 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CL1_1859 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein D CL1_1858 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein D CL1_1857 ATP-binding transport protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:thm03070] D CL1_0938 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CL1_0939 putative preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CL1_0604 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CL1_0019 signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CL1_0576 signal recognition particle protein SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:thm02020] D CL1_1390 ATP:dephospho-CoA triphosphoribosyl transferase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D CL1_1264 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CL1_0545 Nitrogen regulatory protein P-II (glnB) K04751 glnB; nitrogen regulatory protein P-II 1 D CL1_0909 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CL1_0184 putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CL1_0183 putative UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:thm02024] D CL1_0854 hypothetical protein K20276 bapA; large repetitive protein D CL1_0864 hypothetical protein K20276 bapA; large repetitive protein D CL1_0045 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CL1_1446 dipeptide ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CL1_0917 dipeptide/oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CL1_1166 dipeptide/oligopeptide ABC transporter permease 5 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_1447 dipeptide/oligopeptide ABC transporter permease 7 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_0916 dipeptide/oligopeptide ABC transporter permease 2 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_0925 ABC type dipeptide/oligopeptide/nickel transporter permease 3 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_1029 dipeptide/oligopeptide ABC transporter permease 4 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_0921 ABC type dipeptide/oligopeptide/nickel transporter permease 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_1167 dipeptide/oligopeptide ABC transporter permease 6 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_1448 dipeptide/oligopeptide ABC transporter permease 8 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_0915 dipeptide/oligopeptide ABC transporter permease 1 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_0922 ABC type dipeptide/oligopeptide/nickel transporter permease 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_0926 ABC type dipeptide/oligopeptide/nickel transporter permease 4 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_1028 dipeptide/oligopeptide ABC transporter permease 3 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_1449 dipeptide/oligopeptide ABC transporter ATPase 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein D CL1_0914 dipeptide/oligopeptide ABC transporter ATPase 4 K02031 ddpD; peptide/nickel transport system ATP-binding protein D CL1_1450 dipeptide/oligopeptide ABC transporter ATPase 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein D CL1_0604 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CL1_0019 signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CL1_0576 signal recognition particle protein SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CL1_0587 enolase-like protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1117 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:thm04980] D CL1_0082 cobalamin adenosyltransferase like protein K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CL1_1610 lysine/arginine/ornithine transport system kinase K07588 MMAA; GTPase [EC:3.6.5.-] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:thm01503] D CL1_1639 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:thm01000] C 01001 Protein kinases [BR:thm01001] D CL1_1987 putative Mn2+-dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D CL1_1914 hypothetical protein containing protein kinase domain K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CL1_1337 serine/threonine protein kinase, RIO-like protein K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D CL1_1724 putiative protein kinase 1 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CL1_1726 putiative protein kinase 2 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CL1_1727 putiative protein kinase 3 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] C 01009 Protein phosphatases and associated proteins [BR:thm01009] D CL1_0653 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D CL1_1522 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CL1_1720 putative Serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CL1_1723 putative Protein phosphatase 2C-like protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CL1_1528 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:thm01002] D CL1_1529 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D CL1_0147 hydrogenase-specific maturation endopeptidase K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D CL1_0483 hydrogenase maturation protease K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D CL1_1516 putative polysaccharide deacetylase K22684 MCA1; metacaspase-1 [EC:3.4.22.-] D CL1_1007 pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CL1_0776 GMP synthase subunit A K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CL1_0779 GMP synthase subunit B K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CL1_1396 putative glutamine amidotransferase-like protein K07010 K07010; putative glutamine amidotransferase D CL1_0793 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CL1_1905 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CL1_1601 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CL1_1387 intracellular protease 1 K26818 pfpI; archaeal arginyl aminopeptidase [EC:3.4.11.27] D CL1_1002 hypothetical protein K07052 K07052; CAAX protease family protein D CL1_0031 putative membrane-associated metalloprotease K07052 K07052; CAAX protease family protein D CL1_1177 hypothetical protein containing peptidase_M19 domain K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CL1_0896 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CL1_1265 putative metallopeptidase M20 K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CL1_0294 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CL1_0101 putative X-Pro dipeptidase 1 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CL1_0557 X-pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CL1_1012 putative carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D CL1_1652 glutamyl aminopeptidase, M42 family K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-] D CL1_0300 hypothetical protein containing peptidase M42 domain 2 K20608 tet; tetrahedral aminopeptidase [EC:3.4.11.-] D CL1_1990 putative heat shock protein HtpX 1 K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CL1_1991 putative heat shock protein HtpX 2 K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CL1_1893 hypothetical protein containing Peptidase_M54 domain K06974 amzA; archaemetzincin [EC:3.4.-.-] D CL1_1620 D-aminopeptidase, DppA type K16203 dppA1; D-amino peptidase [EC:3.4.11.-] D CL1_0431 hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-] D CL1_0707 putative aminopeptidase 1 K01266 dmpA; D-aminopeptidase [EC:3.4.11.19] D CL1_1349 putative subtilisin-like serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-] D CL1_0046 putative Prolyl oligopeptidase (preP) K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D CL1_0151 putative ATP-dependent protease Lon K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D CL1_1155 putative signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D CL1_1180 signal peptidase I K13280 SEC11; signal peptidase I [EC:3.4.21.89] D CL1_0754 signal peptidase I, S26B family K13280 SEC11; signal peptidase I [EC:3.4.21.89] D CL1_0326 putative endopeptidase IV K04773 sppA; protease IV [EC:3.4.21.-] D CL1_0671 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D CL1_1304 proteasome subunit beta 2 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D CL1_0539 proteasome subunit beta 1 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D CL1_1333 L-asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CL1_1273 putative modulator of DNA gyrase, PmbA/TldD protein-like protein 2 K03592 pmbA; PmbA protein D CL1_1879 zinc-dependent protease, TldD/PmbA family 1 K03592 pmbA; PmbA protein D CL1_2030 putative modulator of DNA gyrase, PmbA/TldD family 1 K03592 pmbA; PmbA protein D CL1_1272 putative modulator of DNA gyrase, PmbA/TldD protein-like protein 1 K03568 tldD; TldD protein D CL1_1880 zinc-dependent protease, TldD/PmbA family 2 K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:thm01003] D CL1_1341 glycosyl transferase family 4 protein K01001 ALG7; UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] D CL1_0993 putative glycosyl transferase, family 2 protein 1 K22844 aglG; glucosyl-dolichyl phosphate glucuronosyltransferase [EC:2.4.1.356] D CL1_0859 putative oligosaccharyl transferase, STT3 subunit 2 K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D CL1_1904 oligosaccharyl transferase, STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D CL1_0839 putative oligosaccharyl transferase, STT3 subunit 1 K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D CL1_0748 glycosyl transferase family 2 protein 2 K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CL1_0049 glycosyl transferase family 2 protein 1 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:thm01005] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:thm01011] D CL1_0290 hypothetical protein containing Bacitracin resistance domain K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CL1_1639 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:thm01004] D CL1_1998 glucose-1-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CL1_1587 acetyl-CoA synthetase I (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1416 acetyl-CoA synthetase II (NDP forming) subunit alpha K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1667 hypothetical protein K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1036 succinyl-CoA synthetase large subunit K01905 acdA; acetate---CoA ligase (ADP-forming) subunit alpha [EC:6.2.1.13] D CL1_1666 hypothetical protein K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] D CL1_0374 acetyl-CoA synthetase subunit beta K22224 acdB; acetate---CoA ligase (ADP-forming) subunit beta [EC:6.2.1.13] C 01008 Polyketide biosynthesis proteins [BR:thm01008] D CL1_1883 putative aspartate racemase 1 K01779 racD; aspartate racemase [EC:5.1.1.13] D CL1_2035 putative aspartate racemase 2 K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:thm01006] D CL1_0563 bifunctional short chain isoprenyl diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] C 01007 Amino acid related enzymes [BR:thm01007] D CL1_1329 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D CL1_0410 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CL1_1689 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CL1_1035 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CL1_0029 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CL1_0179 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CL1_0110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CL1_0874 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CL1_2026 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CL1_0558 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CL1_0358 aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D CL1_1712 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CL1_0636 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CL1_0963 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CL1_0090 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CL1_1593 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CL1_0119 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CL1_0307 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CL1_0957 alanyl-tRNA synthetase 2 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_0927 alanyl-tRNA synthetase 1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_1300 alanyl-tRNA synthetase-like protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_1810 hypothetical protein containing alanyl tRNA synthase domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_0342 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CL1_0339 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CL1_1464 putative aspartate aminotransferase 2 K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D CL1_0451 putative aminotransferase 2 K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CL1_0123 putative aspartate aminotransferase 1 K10907 K10907; aminotransferase [EC:2.6.1.-] D CL1_1821 putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_2024 putative aminotransferase 1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CL1_1311 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CL1_1122 4-aminobutyrate aminotransferase 2 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_0205 4-aminobutyrate aminotransferase 1 K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CL1_0825 Pleiotropic regulatory protein, pyridoxal-phosphate-dependent aminotransferase (degT) K13010 per; perosamine synthetase [EC:2.6.1.102] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:thm03000] D CL1_1080 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1491 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1411 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D CL1_1386 transcription regulator, AsnC family 6 K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CL1_1203 transcription regulator, AsnC family 4 K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CL1_0206 transcription regulator, AsnC family 1 K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CL1_1690 transcription regulator, Lrp/AsnC family 2 K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CL1_1850 transcription regulator, ArsR family 9 K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D CL1_0155 transcription regulator, ArsR family 2 K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D CL1_1489 heat shock regulator K07721 K07721; ArsR family transcriptional regulator D CL1_0386 transcription regulator, ArsR family 5 K07721 K07721; ArsR family transcriptional regulator D CL1_0242 transcription regulator, ArsR family 3 K07721 K07721; ArsR family transcriptional regulator D CL1_1295 hypothetical protein K22206 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator D CL1_0584 transcription regulator, PadR-like familiy 1 K10947 K10947; PadR family transcriptional regulator D CL1_0740 puativie transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D CL1_0712 metal ion-dependent transcription regulator, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CL1_1807 biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CL1_1097 putative transcription regulator, MarR family 2 K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D CL1_0369 transcription regulator, TrmB family 1 K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CL1_0883 putative transcription regulator, TrmB family K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D CL1_1187 DNA-binding protein, Tfx type K09714 tfx; HTH-type transcriptional regulator, fmd operon transcriptional regulator D CL1_2004 hypothetical protein K07728 K07728; putative transcriptional regulator D CL1_1458 hypothetical protein K07729 K07729; putative transcriptional regulator D CL1_1362 putative transcriptional regulator K07731 K07731; putative transcriptional regulator D CL1_0549 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D CL1_1388 hypothetical protein K03973 pspC; phage shock protein C C 03021 Transcription machinery [BR:thm03021] D CL1_1484 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D CL1_1584 transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB D CL1_1411 TATA-box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D CL1_1235 transcription initiation factor E subunit alpha K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D CL1_1649 putative Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CL1_0759 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D CL1_0399 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D CL1_1602 GTPase K24104 GPN; GPN-loop GTPase D CL1_0444 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA D CL1_0441 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D CL1_0442 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D CL1_0440 DNA-directed RNA polymerase subunit B K13798 rpoB; DNA-directed RNA polymerase subunit B [EC:2.7.7.6] D CL1_0593 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D CL1_0758 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D CL1_0282 DNA-directed RNA polymerase subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D CL1_0439 DNA-directed RNA polymerase subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D CL1_0588 DNA-directed RNA polymerase subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D CL1_0311 DNA-directed RNA polymerase subunit L K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D CL1_0589 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D CL1_0229 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D CL1_1867 transcription elongation factor S (TFS_arch) K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:thm03019] D CL1_0759 DNA-directed RNA polymerase subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4 D CL1_0399 transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5 D CL1_1568 cell division protein containing CDC48 domain 1 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_1590 cell division protein containing CDC48 domain 2 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_0102 cell division protein K06965 PELO; protein pelota D CL1_0178 putative peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D CL1_1931 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D CL1_0309 hypothetical protein containing nucleic acid -binding domain K07573 CSL4; exosome complex component CSL4 D CL1_0669 exosome complex RNA-binding protein Rrp4 K03679 RRP4; exosome complex component RRP4 D CL1_0668 exosome complex exonuclease Rrp41 K11600 RRP41; exosome complex component RRP41 D CL1_0667 exosome complex RNA-binding protein Rrp42 K12589 RRP42; exosome complex component RRP42 D CL1_1075 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D CL1_0565 hypothetical protein containing metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-] D CL1_1618 DEAD-like helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CL1_0587 enolase-like protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1117 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1691 DEAD/DEAH box helicase K03725 K03725; putative ATP-dependent RNA helicase [EC:5.6.2.-] C 03041 Spliceosome C 03011 Ribosome [BR:thm03011] D CL1_0160 30S ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D CL1_0615 30S ribosomal protein S4e K02987 RP-S4e; small subunit ribosomal protein S4e D CL1_0724 30S ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D CL1_0347 30S ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D CL1_1490 30S ribosomal protein S17e K02962 RP-S17e; small subunit ribosomal protein S17e D CL1_1578 30S ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D CL1_0761 30S ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D CL1_0458 30S ribosomal protein S27e K02978 RP-S27e; small subunit ribosomal protein S27e D CL1_0762 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D CL1_1742 30S ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D CL1_0627 50S ribosomal protein L4P K02930 RP-L4e; large subunit ribosomal protein L4e D CL1_1741 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D CL1_0631 50S ribosomal protein L10E K02866 RP-L10e; large subunit ribosomal protein L10e D CL1_0599 50S ribosomal protein L14e K02875 RP-L14e; large subunit ribosomal protein L14e D CL1_0556 50S ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D CL1_0592 ribosomal protein L18e K02883 RP-L18e; large subunit ribosomal protein L18e D CL1_0609 50S ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D CL1_0283 50S ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D CL1_1743 50S ribosomal protein L24e K02896 RP-L24e; large subunit ribosomal protein L24e D CL1_0443 50S ribosomal protein L30e K02908 RP-L30e; large subunit ribosomal protein L30e D CL1_1573 50S ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D CL1_0610 50S ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D CL1_0601 ribosomal protein L34Ae K02915 RP-L34e; large subunit ribosomal protein L34e D CL1_0099 50S ribosomal protein L35Ae K02917 RP-L35Ae; large subunit ribosomal protein L35Ae D CL1_0093 50S ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D CL1_0228 50S ribosomal protein L37Ae K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D CL1_1572 50S ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D CL1_0585 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D CL1_0457 50S ribosomal protein L44e K02929 RP-L44e; large subunit ribosomal protein L44e D CL1_0586 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CL1_0622 30S ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D CL1_0595 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CL1_0607 30S ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D CL1_0446 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CL1_0612 30S ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D CL1_0590 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CL1_1932 30S ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D CL1_0594 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CL1_0445 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CL1_0596 30S ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D CL1_0613 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CL1_0163 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CL1_0618 30S ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D CL1_0624 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CL1_0401 50S ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D CL1_0625 50S ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D CL1_0628 50S ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D CL1_0614 50S ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D CL1_0611 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CL1_0402 acidic ribosomal protein P0/50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CL1_0400 50S ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D CL1_0591 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CL1_0617 50S ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D CL1_0605 50S ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D CL1_0608 50S ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D CL1_0623 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CL1_0626 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CL1_0616 50S ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D CL1_0621 50S ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D CL1_0606 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CL1_0403 50S ribosomal protein L12a (P1/P2) K02869 RP-L12; large subunit ribosomal protein L12 D CL1_1575 50S ribosomal protein LX K02944 RP-LX; large subunit ribosomal protein LX D CL1_r0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CL1_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CL1_r0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CL1_r0003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:thm03009] D CL1_1401 C/D box methylation guide ribonucleoprotein complex aNOP56 subunit K14564 NOP56; nucleolar protein 56 D CL1_0597 H/ACA RNA-protein complex component Cbf5p K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D CL1_0460 putative H/ACA RNA-protein complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D CL1_0230 ribosomal biogenesis protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D CL1_0260 ribosome biogenesis protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D CL1_1915 hypothetical protein containing KH domain K06961 KRR1; ribosomal RNA assembly protein D CL1_1914 hypothetical protein containing protein kinase domain K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D CL1_1337 serine/threonine protein kinase, RIO-like protein K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D CL1_0125 putative kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D CL1_1948 putative ATPase RIL K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D CL1_0288 putative GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein D CL1_0881 ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D CL1_0552 ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D CL1_0719 hypothetical protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D CL1_1574 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6 D CL1_0501 putative nonsense-mediated mRNA decay protein, NMD3-family K07562 NMD3; 60S ribosomal export protein NMD3 D CL1_0670 putative RNA-associated protein K14574 SDO1; ribosome maturation protein SDO1 D CL1_1568 cell division protein containing CDC48 domain 1 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_1590 cell division protein containing CDC48 domain 2 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_0947 hypothetical protein containing ribosome biogenesis factor K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D CL1_1506 GTP-binding protein 3 K03595 era; GTPase D CL1_1402 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D CL1_1741 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D CL1_1483 H/ACA RNA-protein complex component Gar1 K07569 gar1; RNA-binding protein D CL1_0444 transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA D CL1_0280 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CL1_0700 hypothetical protein containing sun-domain K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CL1_0732 hypothetical protein containing fmu domain K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CL1_0898 putative SAM-dependent methyltransferase 1 K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CL1_1995 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CL1_1748 23S rRNA (uracil-5-)-methyltransferase 2 K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D CL1_1309 hypothetical protein containing acyl-CoA N-acyltransferases (Nat)-domain K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CL1_1618 DEAD-like helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CL1_1251 GTP-binding protein, HflX family K03665 hflX; GTPase D CL1_1598 putative translation factor, sua5 family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CL1_1577 RNA-binding protein K07574 yhbY; RNA-binding protein D CL1_2036 translation-associated GTPase K06942 ychF; ribosome-binding ATPase D CL1_1319 RNA-binding protein FAU-1 K22469 fau-1; probable ribonuclease FAU-1 [EC:3.1.26.-] C 03016 Transfer RNA biogenesis [BR:thm03016] D CL1_0881 ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D CL1_0552 ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D CL1_1525 ribonuclease P protein component 4 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D CL1_0475 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CL1_1978 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D CL1_1975 hypothetical protein containing archease domain K24956 ZBTB8OS; protein archease D CL1_1931 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D CL1_0410 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CL1_0119 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CL1_0874 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CL1_0558 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CL1_0110 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CL1_0179 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CL1_0358 aspartyl-tRNA synthetase K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12] D CL1_0957 alanyl-tRNA synthetase 2 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_0927 alanyl-tRNA synthetase 1 K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_1300 alanyl-tRNA synthetase-like protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_1810 hypothetical protein containing alanyl tRNA synthase domain K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CL1_1712 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CL1_0636 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CL1_0090 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CL1_0307 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CL1_1593 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CL1_0029 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CL1_2026 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CL1_0963 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CL1_0342 phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CL1_0339 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CL1_1689 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CL1_1035 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CL1_0396 hypothetical protein K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CL1_1153 MiaB-like tRNA modifying enzyme, archaeal-type K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D CL1_0098 N(2),N(2)-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D CL1_1092 nol1-nop2-sun family nucleolar protein III K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-] D CL1_1315 Met-10+ like protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CL1_2028 hypothetical protein K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CL1_1442 tRNA methyltransferase, GCD14 type K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CL1_0765 tRNA-modifying enzyme K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D CL1_1935 hypothetical protein K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] D CL1_0808 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D CL1_1182 hypothetical protein K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D CL1_0338 putative pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CL1_0355 putative tRNA pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D CL1_0284 hypothetical protein K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D CL1_1987 putative Mn2+-dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D CL1_1087 putative DNA-binding/iron metalloprotein/AP endonuclease K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D CL1_0953 histone acetyltransferase-like protein K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D CL1_1598 putative translation factor, sua5 family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CL1_0159 putative RNA-binding protein containing THUMP domain K06963 TAN1; tRNA acetyltransferase TAN1 D CL1_1126 RNA-binding protein containing THUMP domain K06963 TAN1; tRNA acetyltransferase TAN1 D CL1_0390 hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D CL1_0867 tRNA CCA-pyrophosphorylase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D CL1_1310 tRNA-splicing endonuclease subunit alpha K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D CL1_0865 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CL1_1376 RNA 2'-phosphotransferase-like protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D CL1_1329 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D CL1_1258 putative tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D CL1_1202 23S rRNA (uracil-5-)-methyltransferase 1 K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D CL1_0088 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D CL1_0256 hypothetical protein K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D CL1_2027 putative tRNA m1G methyltransferase K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221] D CL1_1031 hypothetical protein K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D CL1_1819 N2, N2-dimethylguanosine tRNA methyltransferase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D CL1_1536 tRNA 2'-O-methylase K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D CL1_1976 tRNA/rRNA cytosine-C5-methylase K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-] D CL1_0970 hypothetical protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D CL1_1465 hypothetical protein K09119 cgi121; KEOPS complex subunit Cgi121 D CL1_0231 putative KEOPS complex Pcc1-like subunit K09741 pcc1; KEOPS complex subunit Pcc1 D CL1_1364 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CL1_1780 putative 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CL1_0225 hypothetical protein containing SAM domain 2 K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CL1_0051 7-cyano-7-deazaguanine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D CL1_1661 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CL1_1663 hypothetical protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CL1_2002 hypothetical protein K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D CL1_1706 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D CL1_1010 hypothetical protein containing PIN domain 18 K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:thm03012] D CL1_1913 translation initiation factor IF-1 K03236 EIF1A; translation initiation factor 1A D CL1_0620 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D CL1_0459 translation initiation factor IF-2 subunit alpha K03237 EIF2S1; translation initiation factor 2 subunit 1 D CL1_0653 translation initiation factor IF-2 subunit beta K03238 EIF2S2; translation initiation factor 2 subunit 2 D CL1_0725 translation initiation factor IF-2 subunit gamma K03242 EIF2S3; translation initiation factor 2 subunit 3 D CL1_0084 translation initiation factor IF-2B subunit alpha K03680 EIF2B4; translation initiation factor eIF-2B subunit delta D CL1_0262 translation initiation factor IF-5A K03263 EIF5A; translation initiation factor 5A D CL1_1746 translation initiation factor IF-2 K03243 EIF5B; translation initiation factor 5B D CL1_1574 translation initiation factor IF-6 K03264 EIF6; translation initiation factor 6 D CL1_1931 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D CL1_0821 elongation factor 1-beta K03232 EEF1B; elongation factor 1-beta D CL1_1929 elongation factor EF-2 K03234 EEF2; elongation factor 2 D CL1_0735 diphthamide synthesis protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D CL1_1476 hypothetical protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D CL1_0178 putative peptide chain release factor 1 K03265 ETF1; peptide chain release factor subunit 1 D CL1_0764 hypothetical protein containing methylase domain K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CL1_0356 peptidyl-tRNA hydrolase K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:thm03110] D CL1_0816 chaperonin subunit beta K22447 cct; archaeal chaperonin D CL1_1989 chaperonin subunit alpha K22447 cct; archaeal chaperonin D CL1_1569 small heat shock protein, Hsp20 type K13993 HSP20; HSP20 family protein D CL1_0005 prefoldin alpha subunit 1 K04797 pfdA; prefoldin alpha subunit D CL1_1793 prefoldin alpha subunit 2 K04797 pfdA; prefoldin alpha subunit D CL1_0232 prefoldin beta subunit K04798 pfdB; prefoldin beta subunit D CL1_0481 hydrogenase nickel incorporation protein HypA/HybF K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CL1_0030 putative peptidyl-prolyl cis-trans isomerase, FKBP-type 1 K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] C 04131 Membrane trafficking [BR:thm04131] D CL1_1744 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CL1_1568 cell division protein containing CDC48 domain 1 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_1590 cell division protein containing CDC48 domain 2 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_1802 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CL1_0398 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D CL1_1896 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CL1_1931 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:thm04121] D CL1_0585 50S ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D CL1_0762 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae C 03051 Proteasome [BR:thm03051] D CL1_0671 proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D CL1_1304 proteasome subunit beta 2 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D CL1_0539 proteasome subunit beta 1 K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D CL1_1339 proteasome-activating nucleotidase K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:thm03032] D CL1_1865 DNA polymerase sliding clamp protein K04802 PCNA; proliferating cell nuclear antigen D CL1_1585 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CL1_1197 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D CL1_1080 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1491 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_0460 putative H/ACA RNA-protein complex component Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D CL1_0597 H/ACA RNA-protein complex component Cbf5p K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D CL1_0409 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CL1_1058 cell division control protein 6 K10725 cdc6A; archaeal cell division control protein 6 D CL1_0652 cell division control protein, MCM family K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D CL1_0904 DNA primase small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D CL1_0903 DNA primase large subunit K18882 priL; DNA primase large subunit D CL1_1864 hypothetical protein K09723 ginS; DNA replication factor GINS D CL1_0651 hypothetical protein K09723 ginS; DNA replication factor GINS D CL1_1910 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CL1_0698 DNA polymerase, family B K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D CL1_1060 DNA polymerase II large subunit K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D CL1_1059 DNA polymerase II small subunit K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D CL1_1314 replication factor C large subunit K04800 rfcL; replication factor C large subunit D CL1_1313 replication factor C small subunit K04801 rfcS; replication factor C small subunit D CL1_1917 DNA topoisomerase VI subunit A K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D CL1_1916 DNA topoisomerase VI subunit B K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D CL1_0389 DNA topoisomerase, type IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CL1_0370 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:thm03036] D CL1_1080 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1491 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_0629 hypothetical protein K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D CL1_1486 archaeal histone B K24450 hmf; DNA-binding protein D CL1_0406 archaeal histone A K24450 hmf; DNA-binding protein D CL1_1690 transcription regulator, Lrp/AsnC family 2 K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CL1_1613 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D CL1_1614 chromosome segregation and condensation protein ScpA-like protein K05896 scpA; segregation and condensation protein A D CL1_0713 segregation and condensation protein B K06024 scpB; segregation and condensation protein B D CL1_1467 cell division protein FtsZ 3 K03531 ftsZ; cell division protein FtsZ D CL1_0397 cell division protein FtsZ 1 K03531 ftsZ; cell division protein FtsZ D CL1_1639 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CL1_1200 hypothetical protein K03609 minD; septum site-determining protein MinD D CL1_1603 ATPase, MinD family 2 K03609 minD; septum site-determining protein MinD D CL1_1629 ATPase, MinD family 3 K03609 minD; septum site-determining protein MinD D CL1_1468 hypothetical protein K03496 parA; chromosome partitioning protein D CL1_1656 integrase-like protein K04763 xerD; integrase/recombinase XerD D CL1_1238 nucleotide-binding protein, MRP family K03593 mrp; ATP-binding protein involved in chromosome partitioning D CL1_0482 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:thm03400] D CL1_1257 putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CL1_1081 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CL1_1673 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CL1_1494 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CL1_1865 DNA polymerase sliding clamp protein K04802 PCNA; proliferating cell nuclear antigen D CL1_1585 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CL1_1197 ATP-dependent DNA ligase K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D CL1_1649 putative Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D CL1_1481 hypothetical protein containing NUDIX hydrolase domain K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CL1_2022 putative uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CL1_1194 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D CL1_1633 putative DNA glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CL1_0706 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CL1_0128 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D CL1_0162 recJ-like single-stranded DNA exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CL1_1985 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2 D CL1_1753 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D CL1_1754 DNA double-strand break repair protein mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 D CL1_0381 CRISPR-associated protein Cas1, HMARI/TNEAP subtype K15342 cas1; CRISP-associated protein Cas1 D CL1_1814 CRISPR-associated Cas1 family protein 1 K15342 cas1; CRISP-associated protein Cas1 D CL1_1961 CRISPR-associated Cas1 family protein 2 K15342 cas1; CRISP-associated protein Cas1 D CL1_1052 DNA recombination and repair protein, RecA-like protein K04483 radA; DNA repair protein RadA D CL1_1320 DNA repair and recombination protein RadB K04484 radB; DNA repair protein RadB D CL1_0302 resolvase, Holliday junction-type, archaeal K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D CL1_1755 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D CL1_1752 5'-3' nuclease K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-] D CL1_1452 Ski-2 like helicase K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4] D CL1_0389 DNA topoisomerase, type IA K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CL1_1766 ATP-dependent helicase, lhr-like protein (lhr) K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CL1_0791 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CL1_0862 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CL1_0448 hypothetical protein K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:thm03029] D CL1_0881 ribonuclease P protein component 2 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D CL1_0552 ribonuclease P protein component 3 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D CL1_1506 GTP-binding protein 3 K03595 era; GTPase D CL1_1689 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CL1_0558 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CL1_0090 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CL1_0179 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CL1_1238 nucleotide-binding protein, MRP family K03593 mrp; ATP-binding protein involved in chromosome partitioning D CL1_0482 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:thm02000] D CL1_1512 molybdate/tungstate ABC transporter periplasmic substrate-binding protein K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D CL1_1513 molybdate/tungstate ABC type transporter permease K15496 wtpB; molybdate/tungstate transport system permease protein D CL1_1514 molybdate/tungstate ABC type transporter ATPase K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D CL1_1687 iron(III) ABC transporter periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein D CL1_1686 iron(III) ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CL1_1685 iron(III) ABC transporter ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CL1_1711 thiamine ABC transporter periplasmic binding protein K02064 thiB; thiamine transport system substrate-binding protein D CL1_0708 ABC type iron(III) transporter permease K02063 thiP; thiamine transport system permease protein D CL1_0709 ABC type sugar transporter ATPase K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CL1_0889 maltooligosaccharide transport system ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CL1_0885 maltooligosaccharide transport system substrate-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CL1_0886 maltooligosaccharide transport system permease protein 1 K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CL1_0887 maltooligosaccharide transport system permease protein 2 K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CL1_0021 membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D CL1_0023 ABC type sugar transporter permease 1 K23535 nupB; general nucleoside transport system permease protein D CL1_0024 ABC type sugar transporter permease 2 K23536 nupC; general nucleoside transport system permease protein D CL1_0022 ABC type transporter ATPase 1 K23537 nupA; general nucleoside transport system ATP-binding protein D CL1_1446 dipeptide ABC transporter substrate binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CL1_0917 dipeptide/oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CL1_1166 dipeptide/oligopeptide ABC transporter permease 5 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_1447 dipeptide/oligopeptide ABC transporter permease 7 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_0916 dipeptide/oligopeptide ABC transporter permease 2 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_0925 ABC type dipeptide/oligopeptide/nickel transporter permease 3 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_1029 dipeptide/oligopeptide ABC transporter permease 4 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_0921 ABC type dipeptide/oligopeptide/nickel transporter permease 1 K02033 ABC.PE.P; peptide/nickel transport system permease protein D CL1_1167 dipeptide/oligopeptide ABC transporter permease 6 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_1448 dipeptide/oligopeptide ABC transporter permease 8 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_0915 dipeptide/oligopeptide ABC transporter permease 1 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_0922 ABC type dipeptide/oligopeptide/nickel transporter permease 2 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_0926 ABC type dipeptide/oligopeptide/nickel transporter permease 4 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_1028 dipeptide/oligopeptide ABC transporter permease 3 K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CL1_1449 dipeptide/oligopeptide ABC transporter ATPase 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein D CL1_0914 dipeptide/oligopeptide ABC transporter ATPase 4 K02031 ddpD; peptide/nickel transport system ATP-binding protein D CL1_1450 dipeptide/oligopeptide ABC transporter ATPase 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein D CL1_1241 iron(III)-siderophore ABC transporter ATP-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CL1_1240 iron(III)-siderophore ABC transporter permease 1 K02015 ABC.FEV.P; iron complex transport system permease protein D CL1_1239 iron(III)-siderophore ABC transporter ATPase 1 K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CL1_0137 iron (III) ABC transporter periplasmic-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D CL1_1306 iron(III)-siderophore ABC transporter permease 2 K25027 btuC; cobalamin transport system permease protein D CL1_1305 iron(III)-siderophore ABC transporter ATPase 2 K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D CL1_0463 cobalt ABC transport protein, CbiN K02009 cbiN; cobalt/nickel transport protein D CL1_0464 cobalt ABC transporter permease 1, CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CL1_0462 cobalt ABC transporter permease, CbiM K02007 cbiM; cobalt/nickel transport system permease protein D CL1_0465 cobalt ABC transporter ATPase 1 K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CL1_1697 putative biotin biosynthesis protein BioY K03523 bioY; biotin transport system substrate-specific component D CL1_1695 cobalt ABC transporter permease 2, CbiQ K16785 ecfT; energy-coupling factor transport system permease protein D CL1_0296 cobalt transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CL1_1696 cobalt ABC transporter ATPase 2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CL1_0025 manganese/zinc ABC transporter periplasmic protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CL1_1911 ABC type manganese/zinc transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CL1_1912 ABC type manganese/zinc transporter ATPase K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D CL1_1859 hypothetical protein K16905 K16905; fluoroquinolone transport system permease protein D CL1_1858 hypothetical protein K16906 K16906; fluoroquinolone transport system permease protein D CL1_1857 ATP-binding transport protein K16907 K16907; fluoroquinolone transport system ATP-binding protein [EC:7.6.2.-] D CL1_1165 ABC type transporter permease 3 K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_1456 putative ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_0333 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_1832 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_1979 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_1925 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_1160 ABC type transporter permease 1 K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_1677 ABC type multidrug transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CL1_1215 multidrug ABC transporter ATPase 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_1457 putative ABC type transporter, ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_0334 multidrug ABC transporter ATPase 1 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_1834 ABC type multidrug transporter ATPase 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_1981 ABC type multidrug transporter ATPase 4 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_1927 ABC type multidrug transporter ATPase 3 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_1478 ABC type multidrug transporter ATPase 1 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_1161 ABC type transporter ATPase 2 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_1676 multidrug ABC transporter ATPase 3 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CL1_0150 ABC-type transport involved in Fe -S cluster assembly, ATPase component K09013 sufC; Fe-S cluster assembly ATP-binding protein D CL1_0094 Na+-driven multidrug efflux pump protein K26939 norM; MATE family, multidrug efflux pump D CL1_0510 multi antimicrobial extrusion protein MatE 2 K26937 dinF; MATE family, multidrug efflux pump D CL1_0509 multi antimicrobial extrusion protein MatE 1 K26937 dinF; MATE family, multidrug efflux pump D CL1_1877 major facilitator superfamily permease 14 K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CL1_1053 calcium-gated potassium channel protein K10716 kch; voltage-gated potassium channel D CL1_1145 formate transporter K21993 fdhC; formate transporter D CL1_1884 putative mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel D CL1_1669 divalent cation transporter, MgtE-like protein K07244 K07244; mgtE-like transporter D CL1_1887 camphor resistance protein CrcB K06199 crcB; fluoride exporter D CL1_1189 LrgA-like protein K06518 cidA; holin-like protein D CL1_0420 major facilitator superfamily permease 3 K16211 malY; maltose/moltooligosaccharide transporter D CL1_1454 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family D CL1_0134 putative drug/metabolite transporter 1 K03298 TC.DME; drug/metabolite transporter, DME family D CL1_0910 putative drug/metabolite transporter 3 K03298 TC.DME; drug/metabolite transporter, DME family D CL1_1710 Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter D CL1_1888 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D CL1_1413 Na+/H+ antiporter K11105 cvrA; potassium/hydrogen antiporter D CL1_0965 putative Na+/H+ antiporter 1 K26730 napA; Na+:H+ antiporter D CL1_0266 sodium/hydrogen antiporter, NapA-type K26730 napA; Na+:H+ antiporter D CL1_0977 putative Na+/H+ antiporter 2, NapA type K26730 napA; Na+:H+ antiporter D CL1_0295 putative potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D CL1_0937 Trk-type pottasium transport system, NAD-binding component K03499 trkA; trk/ktr system potassium uptake protein D CL1_0711 putative xanthine/uracil permease 2 K06901 pbuG; adenine/guanine/hypoxanthine permease D CL1_1870 aromatic amino acid permease K03834 tyrP; tyrosine-specific transport protein D CL1_0268 chloride channel protein K03281 clcA; chloride channel protein, CIC family D CL1_1802 arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CL1_1430 putative monovalent cation/H+ antiporter 3 subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D CL1_0194 putative monovalent cation/H+ antiporter 1 subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B D CL1_1429 putative monovalent cation/H+ antiporter 3 subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CL1_1136 putative monovalent cation/H+ antiporter 2 subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CL1_0195 putative monovalent cation/H+ antiporter 1 subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CL1_1428 putative monovalent cation/H+ antiporter 3 subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CL1_1142 putative monovalent cation/H+ antiporter 2 subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CL1_1435 putative monovalent cation/H+ antiporter 3 subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CL1_0190 putative monovalent cation/H+ antiporter 1 subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CL1_1141 putative monovalent cation/H+ antiporter 2 subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CL1_1434 putative monovalent cation/H+ antiporter 3 subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CL1_0191 putative monovalent cation/H+ antiporter 1 subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CL1_1140 putative monovalent cation/H+ antiporter 2 subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CL1_1433 putative monovalent cation/H+ antiporter 3 subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CL1_0192 putative monovalent cation/H+ antiporter 1 subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CL1_0073 permease, Auxin efflux carrier protein-like protein K24180 mleP; malate permease and related proteins D CL1_0097 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D CL1_1393 hypothetical protein K05595 marC; multiple antibiotic resistance protein D CL1_0964 hypothetical protein K05595 marC; multiple antibiotic resistance protein D CL1_0657 methylmalonyl-CoA decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D CL1_0654 methylmalonyl-CoA decarboxylase subunit alpha K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3] D CL1_0656 putative methylmalonyl-CoA decarboxylase subunit gamma K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D CL1_0655 methylmalonyl-CoA decarboxylase subunit delta K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta D CL1_0106 iron(II) transport system protein A K04758 feoA; ferrous iron transport protein A D CL1_0107 iron(II) transport system protein B K04759 feoB; ferrous iron transport protein B D CL1_0108 hypothetical protein containing DNA binding domain K07490 feoC; ferrous iron transport protein C C 02044 Secretion system [BR:thm02044] D CL1_1023 hypothetical protein containing Type II secretion system E domain K07332 flaI; archaeal flagellar protein FlaI D CL1_1022 hypothetical protein containing Type II secretion system F domain 2 K07333 flaJ; archaeal flagellar protein FlaJ D CL1_1529 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D CL1_1344 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D CL1_0938 putative preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CL1_0939 putative preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CL1_0722 hypothetical protein K22228 secG; preprotein translocase subunit SecG D CL1_0604 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CL1_0576 signal recognition particle protein SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CL1_0019 signal recognition particle GTPase K03110 ftsY; fused signal recognition particle receptor D CL1_0398 preprotein translocase subunit SecE K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D CL1_1444 signal recognition particle protein SRP19 K03105 SRP19; signal recognition particle subunit SRP19 C 02042 Bacterial toxins C 02022 Two-component system C 02035 Bacterial motility proteins [BR:thm02035] D CL1_1023 hypothetical protein containing Type II secretion system E domain K07332 flaI; archaeal flagellar protein FlaI D CL1_1022 hypothetical protein containing Type II secretion system F domain 2 K07333 flaJ; archaeal flagellar protein FlaJ D CL1_1529 hypothetical protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:thm04812] D CL1_1716 hypothetical protein K07767 KATNA1; katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1] D CL1_1725 hypothetical protein K07767 KATNA1; katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1] D CL1_0570 hypothetical protein K06990 MEMO1; MEMO1 family protein D CL1_1467 cell division protein FtsZ 3 K03531 ftsZ; cell division protein FtsZ D CL1_0397 cell division protein FtsZ 1 K03531 ftsZ; cell division protein FtsZ D CL1_0767 cell division protein FtsZ 2 K22222 cetZ; tubulin-like protein CetZ D CL1_1200 hypothetical protein K03609 minD; septum site-determining protein MinD D CL1_1603 ATPase, MinD family 2 K03609 minD; septum site-determining protein MinD D CL1_1629 ATPase, MinD family 3 K03609 minD; septum site-determining protein MinD D CL1_1468 hypothetical protein K03496 parA; chromosome partitioning protein C 04147 Exosome [BR:thm04147] D CL1_0587 enolase-like protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1117 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CL1_1680 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CL1_1896 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CL1_1177 hypothetical protein containing peptidase_M19 domain K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] D CL1_1862 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CL1_1931 elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha D CL1_1929 elongation factor EF-2 K03234 EEF2; elongation factor 2 D CL1_1585 flap endonuclease-1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D CL1_0803 inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CL1_0762 30S ribosomal protein S27ae K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D CL1_1568 cell division protein containing CDC48 domain 1 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_1590 cell division protein containing CDC48 domain 2 K13525 VCP; transitional endoplasmic reticulum ATPase D CL1_1404 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CL1_1522 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CL1_0603 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_0540 hypothetical protein K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_1899 putative adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CL1_1379 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CL1_0909 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CL1_1261 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CL1_0542 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D CL1_1083 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:thm02048] D CL1_0381 CRISPR-associated protein Cas1, HMARI/TNEAP subtype K15342 cas1; CRISP-associated protein Cas1 D CL1_1814 CRISPR-associated Cas1 family protein 1 K15342 cas1; CRISP-associated protein Cas1 D CL1_1961 CRISPR-associated Cas1 family protein 2 K15342 cas1; CRISP-associated protein Cas1 D CL1_1813 CRISPR-associated Cas2 family protein 1 K09951 cas2; CRISPR-associated protein Cas2 D CL1_1960 CRISPR-associated Cas2 family protein 2 K09951 cas2; CRISPR-associated protein Cas2 D CL1_0383 CRISPR associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D CL1_1811 CRISPR-associated helicase Cas3 domain-containing protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CL1_0379 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D CL1_0376 CRISPR-associated CXXC_CXXC protein Cst1 K19088 cst1; CRISPR-associated protein Cst1 D CL1_0377 CRISPR-associated autoregulator, DevR family 1 K19075 cst2; CRISPR-associated protein Cst2 D CL1_1816 CRISPR-associated autoregulator, DevR family 2 K19075 cst2; CRISPR-associated protein Cst2 D CL1_0380 CRISPR-associated Cas4 family protein 2 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CL1_1812 CRISPR-associated Cas4 family protein 3 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CL1_1937 CRISPR-associated Cas4 family protein 1 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CL1_0378 CRISPR-associated protein Cas5, Tneap type K19090 cas5t; CRISPR-associated protein Cas5t D CL1_1952 CRISPR-associated Cas6 family protein 3 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D CL1_1818 CRISPR-associated Cas6 family protein 2 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D CL1_0375 CRISPR-associated Cas6 family protein 1 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D CL1_1340 CRISPR repeat Cas6-like RNA endoribonuclease K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D CL1_1815 CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h D CL1_1953 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1 D CL1_1954 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2 D CL1_1955 CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3 D CL1_1956 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4 D CL1_1957 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5 D CL1_1959 CRISPR-associated protein, Csx3 family K19144 csx3; CRISPR-associated protein Csx3 D CL1_1080 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1491 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CL1_1920 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D CL1_1921 putative 5-methylcytosine restriction system, catalytic subunit K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC D CL1_0805 hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D CL1_1881 hypothetical protein containing RelE-like domain K06218 relE; mRNA interferase RelE/StbE D CL1_1388 hypothetical protein K03973 pspC; phage shock protein C D CL1_1466 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D CL1_1010 hypothetical protein containing PIN domain 18 K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CL1_1467 cell division protein FtsZ 3 K03531 ftsZ; cell division protein FtsZ D CL1_0397 cell division protein FtsZ 1 K03531 ftsZ; cell division protein FtsZ D CL1_0410 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CL1_1640 hypothetical protein containing PIN domain 3 K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:thm00537] D CL1_1177 hypothetical protein containing peptidase_M19 domain K01273 DPEP; membrane dipeptidase [EC:3.4.13.19] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:thm03100] D CL1_t0005 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CL1_t0033 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CL1_t0034 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CL1_t0043 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0017 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0015 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CL1_t0010 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CL1_t0023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CL1_t0013 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CL1_t0028 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CL1_t0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CL1_t0046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CL1_t0027 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CL1_t0016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CL1_t0032 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CL1_t0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CL1_t0029 tRNA-His K14226 tRNA-His; tRNA His D CL1_t0026 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CL1_t0040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0014 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CL1_t0022 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CL1_t0041 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CL1_t0002 tRNA-Met K14230 tRNA-Met; tRNA Met D CL1_t0042 tRNA-Met K14230 tRNA-Met; tRNA Met D CL1_t0011 tRNA-Met K14230 tRNA-Met; tRNA Met D CL1_t0038 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CL1_t0006 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CL1_t0019 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CL1_t0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CL1_t0021 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CL1_t0045 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CL1_t0009 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CL1_t0007 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CL1_t0031 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CL1_t0030 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CL1_t0004 tRNA-Val K14237 tRNA-Val; tRNA Val D CL1_t0001 tRNA-Val K14237 tRNA-Val; tRNA Val D CL1_t0036 tRNA-Val K14237 tRNA-Val; tRNA Val D CL1_r0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CL1_r0003 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CL1_r0001 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CL1_r0004 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CL1_0826 hypothetical protein containing oxidoreductase-domain K18855 E1.1.1.374; UDP-N-acetylglucosamine 3-dehydrogenase [EC:1.1.1.374] D CL1_0679 indolepyruvate ferredoxin oxidoreductase, alpha subunit 1 K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D CL1_1415 indolepyruvate ferredoxin oxidoreductase, alpha subunit 2 K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D CL1_1330 indolepyruvate ferredoxin oxidoreductase, beta subunit 1 K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D CL1_1414 indolepyruvate ferredoxin oxidoreductase, beta subunit 2 K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D CL1_1373 putative NADH oxidase 1 K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3] D CL1_0500 putative NADH-oxidase 2 K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18] D CL1_1895 putative peroxiredoxin, bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CL1_1131 NADH-ubiquinone oxidoreductase subunit 2 K18016 mbhL; membrane-bound hydrogenase subunit alpha [EC:1.12.7.2] D CL1_1132 NADH-ubiquinone oxidoreductase subunit 3 K18017 mbhK; membrane-bound hydrogenase subunit beta [EC:1.12.7.2] D CL1_1133 NADH-ubiquinone oxidoreductase subunit 4 K18023 mbhJ; membrane-bound hydrogenase subunit mbhJ [EC:1.12.7.2] D CL1_1840 superoxide reductase-like protein K05919 dfx; superoxide reductase [EC:1.15.1.2] D CL1_1360 ferredoxin-NADP(+) reductase subunit alpha 1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CL1_1440 ferredoxin-NADP(+) reductase subunit alpha 2 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CL1_1192 hypothetical protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D CL1_0274 putative pyruvate-formate lyase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CL1_0817 hypothetical protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CL1_1527 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CL1_1363 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98] D CL1_0121 putative carbamoyl transferase, NodU family K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D CL1_1407 putative acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D CL1_1281 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D CL1_1599 glycosyl transferase family protein 4 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D CL1_1999 putative deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D CL1_1351 putative methyltransferase K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D CL1_1211 hypothetical protein K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-] D CL1_0014 hypothetical protein containing SAM domain 1 K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-] D CL1_1327 hypothetical protein K18678 VTE5; phytol kinase [EC:2.7.1.182] D CL1_1941 putative 2-phosphoglycerate kinase K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16] D CL1_2040 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CL1_1535 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D CL1_1043 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D CL1_1758 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CL1_1046 thermonuclease-like protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D CL1_1051 hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-] D CL1_0273 putative glycoside hydrolase/deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D CL1_0153 endoribonuclease L-PSP, YjgF-like protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CL1_1517 putative AAA-type ATPase chaperone 3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CL1_0846 putative AAA-type ATPase chaperone 1 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CL1_1016 putative AAA-type ATPase chaperone 2 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CL1_1538 hypothetical protein K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D CL1_1042 putative YjeF-like carbohydrate kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CL1_0332 archeal type N-glycosylase/DNA lyase K01741 E4.2.99.18; DNA-(apurinic or apyrimidinic site) lyase [EC:4.2.99.18] D CL1_0647 RNA 3'-terminal phosphate cyclase K18105 rtcA; RNA 3'-terminal phosphate cyclase (GTP) [EC:6.5.1.5] D CL1_1940 putative cyclic 2,3-diphosphoglycerate synthetase K05716 CPGS; cyclic 2,3-diphosphoglycerate synthase [EC:6.5.1.9] D CL1_0630 hypothetical protein K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] D CL1_1851 cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D CL1_1653 sugar fermentation stimulation protein A K06206 sfsA; sugar fermentation stimulation protein A C 99982 Energy metabolism D CL1_1354 putative ferredoxin K05337 fer; ferredoxin D CL1_1129 hypothetical protein K15831 hycF; formate hydrogenlyase subunit 6 D CL1_1432 putative multisubunit sodium/hydrogen antiporter, MnhG subunit K14113 ehbD; energy-converting hydrogenase B subunit D D CL1_1139 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D D CL1_0193 hypothetical protein K14113 ehbD; energy-converting hydrogenase B subunit D D CL1_1137 putative monovalent cation/H+ antiporter 2 subunit B K14118 ehbI; energy-converting hydrogenase B subunit I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D CL1_0271 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D CL1_1090 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D CL1_1091 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D CL1_1563 putative molybdopterin-guanine dinucleotide biosynthesis protein K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D CL1_1408 putative transcription factor K03627 MBF1; putative transcription factor D CL1_1776 DNA/RNA-binding protein albA K03622 ssh10b; archaea-specific DNA-binding protein D CL1_0092 small nuclear ribonucleoprotein K04796 RUXX; small nuclear ribonucleoprotein D CL1_0942 hypothetical protein K07745 K07745; transcriptional regulator C 99974 Translation D CL1_0281 hypothetical protein K07572 K07572; putative nucleotide binding protein D CL1_1570 hypothetical protein K07577 K07577; putative mRNA 3-end processing factor D CL1_0734 hypothetical protein K07579 K07579; putative methylase D CL1_0822 hypothetical protein K07580 K07580; Zn-ribbon RNA-binding protein D CL1_0553 hypothetical protein K07581 K07581; RNA-binding protein D CL1_1576 hypothetical protein K07585 K07585; tRNA methyltransferase C 99975 Protein processing D CL1_0485 hydrogenase expression/formation protein HypC K04653 hypC; hydrogenase expression/formation protein HypC D CL1_0486 hydrogenase expression/formation protein hypD K04654 hypD; hydrogenase expression/formation protein HypD D CL1_0490 hydrogenase expression/formation protein HypE 2 K04655 hypE; hydrogenase expression/formation protein HypE D CL1_1946 hydrogenase expression/formation protein HypE 3 K04655 hypE; hydrogenase expression/formation protein HypE D CL1_0103 hydrogenase expression/formation protein HypE 1 K04655 hypE; hydrogenase expression/formation protein HypE D CL1_0487 hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D CL1_1394 osmotically inducible protein C-like protein K07397 yhfA; putative redox protein D CL1_1631 hypothetical protein K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D CL1_0532 site-specific integrase-resolvase K07450 K07450; putative resolvase D CL1_0692 hypothetical protein K07463 K07463; archaea-specific RecJ-like exonuclease D CL1_0223 putative TBP-interacting protein DNA helicase Tip49-like protein K07472 TIP49; TBP-interacting protein D CL1_0127 haloacid dehalogenase superfamily protein K07477 K07477; translin D CL1_0531 IS element ISTsi1 orfB trasposase K07496 K07496; putative transposase D CL1_0452 putative Transposase, IS605-family K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D CL1_1945 restriction endonuclease, type I K07504 K07504; predicted type IV restriction endonuclease B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CL1_1250 putative phosphate transporter protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D CL1_0050 sodium/phosphate symporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D CL1_1158 Phosphate transporter protein K03306 TC.PIT; inorganic phosphate transporter, PiT family D CL1_1382 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D CL1_0543 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family C 99978 Cell growth D CL1_1642 allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA D CL1_0181 hypothetical protein K06384 spoIIM; stage II sporulation protein M C 99993 Cell motility C 99995 Signaling proteins D CL1_1804 carbon starvation protein A K06200 cstA; carbon starvation protein D CL1_1169 protein kinase-like protein K07176 K07176; putative serine/threonine protein kinase D CL1_1582 hypothetical protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins C 99994 Others D CL1_1230 divalent cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein B B 09194 Poorly characterized C 99996 General function prediction only D CL1_1608 hypothetical protein containing PHP domain K04477 ycdX; putative hydrolase D CL1_1604 putative ATPase containing PIN domain K06865 K06865; ATPase D CL1_0664 hypothetical protein containing zinc-finger K06874 K06874; zinc finger protein D CL1_0975 hypothetical protein containing HAD-like domain 5 K07025 K07025; putative hydrolase of the HAD superfamily D CL1_0363 hypothetical protein containing HAD-like domain 2 K07025 K07025; putative hydrolase of the HAD superfamily D CL1_0696 hypothetical protein containing HAD-like domain 4 K07025 K07025; putative hydrolase of the HAD superfamily D CL1_1873 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D CL1_1286 hypothetical protein K07038 K07038; inner membrane protein D CL1_1124 hypothetical protein K07038 K07038; inner membrane protein D CL1_0646 hypothetical protein containing metal dependent hydrolase domain K07049 K07049; TatD-related deoxyribonuclease D CL1_0367 hypothetical protein K07143 K07143; UPF0148 protein D CL1_0900 hypothetical protein K08971 K08971; putative membrane protein D CL1_0704 hypothetical protein K08975 K08975; putative membrane protein C 99997 Function unknown D CL1_1049 hypothetical protein K06869 K06869; uncharacterized protein D CL1_1266 hypothetical protein K06870 K06870; uncharacterized protein D CL1_1162 radical SAM domain protein K06871 K06871; uncharacterized protein D CL1_1030 hypothetical protein K06871 K06871; uncharacterized protein D CL1_2005 putative phosphohydrolase, HD superfamily K06885 K06885; uncharacterized protein D CL1_1928 hypothetical protein containing HD domain 2 K06885 K06885; uncharacterized protein D CL1_0418 hypothetical protein K06889 K06889; uncharacterized protein D CL1_1964 hypothetical protein K06921 K06921; uncharacterized protein D CL1_0823 putative ATPase (AAA+ superfamily) 1 K06921 K06921; uncharacterized protein D CL1_1438 putative ATPase (AAA+ superfamily) 3 K06921 K06921; uncharacterized protein D CL1_1509 putative ATPase (AAA+ superfamily) 8 K06921 K06921; uncharacterized protein D CL1_1510 putative ATPase (AAA+ superfamily) 9 K06921 K06921; uncharacterized protein D CL1_1557 hypothetical protein K06921 K06921; uncharacterized protein D CL1_1747 putative ATPase (AAA+ superfamily) 10 K06921 K06921; uncharacterized protein D CL1_1763 hypothetical protein K06921 K06921; uncharacterized protein D CL1_0979 putative ATPase (AAA+ superfamily) 6 K06921 K06921; uncharacterized protein D CL1_1226 putative ATPase (AAA+ superfamily) 2 K06921 K06921; uncharacterized protein D CL1_1909 putative ATPase (AAA+ superfamily) 11 K06921 K06921; uncharacterized protein D CL1_0053 putative ATPase (AAA+ superfamily) 4 K06921 K06921; uncharacterized protein D CL1_0122 putative ATPase (AAA+ superfamily) 2 K06921 K06921; uncharacterized protein D CL1_0255 putative ATPase (AAA+ superfamily) 3 K06921 K06921; uncharacterized protein D CL1_0637 putative ATPase (AAA+ superfamily) 5 K06921 K06921; uncharacterized protein D CL1_1501 hypothetical protein K06929 K06929; uncharacterized protein D CL1_1779 hypothetical protein K06933 K06933; uncharacterized protein D CL1_1782 hypothetical protein K06934 K06934; uncharacterized protein D CL1_0188 molybdenum cofactor biosynthesis protein A1 K06935 K06935; uncharacterized protein D CL1_0578 hypothetical protein K06940 K06940; uncharacterized protein D CL1_0948 hypothetical protein K06940 K06940; uncharacterized protein D CL1_0360 hypothetical protein containing HD domain 1 K06950 K06950; uncharacterized protein D CL1_0745 putative exonuclease SbcD K06953 K06953; uncharacterized protein D CL1_0790 hypothetical protein containing phosphoesterase domain K06953 K06953; uncharacterized protein D CL1_1282 btpA family protein (btpA) K06971 K06971; uncharacterized protein D CL1_1176 SAM-dependent methyltransferase 1 K06983 K06983; uncharacterized protein D CL1_0417 hypothetical protein containing glycoside hydrolase/deacetylase domain K06986 K06986; uncharacterized protein D CL1_1096 hypothetical protein K07003 K07003; uncharacterized protein D CL1_1357 hypothetical protein K07022 K07022; uncharacterized protein D CL1_0538 hypothetical protein containing KH domain/beta-lactamase-domain protein K07041 K07041; uncharacterized protein D CL1_1370 hypothetical protein K07064 K07064; uncharacterized protein D CL1_1767 hypothetical protein containing PIN domain 6 K07064 K07064; uncharacterized protein D CL1_0701 hypothetical protein containing PIN domain 14 K07064 K07064; uncharacterized protein D CL1_1974 hypothetical protein containing PIN domain 19 K07064 K07064; uncharacterized protein D CL1_1255 hypothetical protein containing PIN domain 7 K07064 K07064; uncharacterized protein D CL1_0064 putative nucleic acid-binding protein, contains PIN domain K07064 K07064; uncharacterized protein D CL1_0016 hypothetical protein containing PIN domain 9 K07064 K07064; uncharacterized protein D CL1_0146 hypothetical protein containing PIN domain 10 K07064 K07064; uncharacterized protein D CL1_1405 hypothetical protein K07068 K07068; uncharacterized protein D CL1_1595 nucleotidyltransferase K07073 K07073; uncharacterized protein D CL1_0070 hypothetical protein K07075 K07075; uncharacterized protein D CL1_0395 putative TRAP type transporter periplasmic component K07080 K07080; uncharacterized protein D CL1_0116 putative permease K07090 K07090; uncharacterized protein D CL1_0114 hypothetical protein K07090 K07090; uncharacterized protein D CL1_0989 hypothetical protein K07090 K07090; uncharacterized protein D CL1_0479 hypothetical protein K07090 K07090; uncharacterized protein D CL1_1485 metallophosphoesterase 2 K07095 K07095; uncharacterized protein D CL1_0650 putative metallo-dependent phosphatase K07095 K07095; uncharacterized protein D CL1_0124 calcineurin superfamily metallophosphoesterase K07096 K07096; uncharacterized protein D CL1_0028 putative phosphoribosyltransferase K07101 K07101; uncharacterized protein D CL1_0863 hypothetical protein containing phosphoribosyltransferase-lilke domain 2 K07101 K07101; uncharacterized protein D CL1_1232 hypothetical protein containing ACT domain 2 K07103 K07103; uncharacterized protein D CL1_0189 hypothetical protein containing ACT domain 1 K07103 K07103; uncharacterized protein D CL1_0598 hypothetical protein K07124 K07124; uncharacterized protein D CL1_0880 hypothetical protein containing SAM domain 4 K07129 K07129; uncharacterized protein D CL1_0080 hypothetical protein K07131 K07131; uncharacterized protein D CL1_1594 hypothetical protein K07133 K07133; uncharacterized protein D CL1_1735 hypothetical protein K07133 K07133; uncharacterized protein D CL1_0866 hypothetical protein K07133 K07133; uncharacterized protein D CL1_1000 putative ATPase 3 K07133 K07133; uncharacterized protein D CL1_0798 hypothetical protein K07133 K07133; uncharacterized protein D CL1_1986 hypothetical protein K07133 K07133; uncharacterized protein D CL1_2001 hypothetical protein K07133 K07133; uncharacterized protein D CL1_2029 hypothetical protein K07133 K07133; uncharacterized protein D CL1_1352 hypothetical protein K07134 K07134; uncharacterized protein D CL1_0237 putative tRNA-binding protein K07135 K07135; uncharacterized protein D CL1_0967 hypothetical protein containing FAD/NAD(P)-binding domain 2 K07137 K07137; uncharacterized protein D CL1_0726 hypothetical protein containing PIN domain 15 K07158 K07158; uncharacterized protein D CL1_0461 hypothetical protein K07159 K07159; uncharacterized protein D CL1_0054 hypothetical protein K09003 K09003; uncharacterized protein D CL1_0004 hypothetical protein K09005 K09005; uncharacterized protein D CL1_1229 hypothetical protein K09120 K09120; uncharacterized protein D CL1_1559 hypothetical protein K09122 K09122; uncharacterized protein D CL1_1105 hypothetical protein containing adenosine specific kinase domain K09129 K09129; uncharacterized protein D CL1_0087 hypothetical protein K09131 K09131; uncharacterized protein D CL1_1050 hypothetical protein K09135 K09135; uncharacterized protein D CL1_1886 hypothetical protein K09137 K09137; uncharacterized protein D CL1_1786 hypothetical protein K09138 K09138; uncharacterized protein D CL1_1326 hypothetical protein K09139 K09139; uncharacterized protein D CL1_0702 hypothetical protein K09141 K09141; uncharacterized protein D CL1_0089 hypothetical protein K09145 K09145; uncharacterized protein D CL1_0502 hypothetical protein K09148 K09148; uncharacterized protein D CL1_0730 hypothetical protein K09149 K09149; uncharacterized protein D CL1_1006 hypothetical protein K09150 K09150; uncharacterized protein D CL1_0665 hypothetical protein K09152 K09152; uncharacterized protein D CL1_1684 hypothetical protein K09154 K09154; uncharacterized protein D CL1_0208 hypothetical protein K09155 K09155; uncharacterized protein D CL1_0727 putative metal-dependent phosphohydrolase K09163 K09163; uncharacterized protein D CL1_0890 hypothetical protein K09713 K09713; uncharacterized protein D CL1_1760 hypothetical protein K09715 K09715; uncharacterized protein D CL1_1184 hypothetical protein K09721 K09721; uncharacterized protein D CL1_1918 hypothetical protein K09724 K09724; uncharacterized protein D CL1_1179 hypothetical protein K09725 K09725; uncharacterized protein D CL1_0182 hypothetical protein K09726 K09726; uncharacterized protein D CL1_0829 hypothetical protein K09726 K09726; uncharacterized protein D CL1_1409 hypothetical protein K09727 K09727; uncharacterized protein D CL1_0351 hypothetical protein K09728 K09728; uncharacterized protein D CL1_1644 hypothetical protein K09730 K09730; uncharacterized protein D CL1_0350 hypothetical protein K09731 K09731; uncharacterized protein D CL1_1038 hypothetical protein K09732 K09732; uncharacterized protein D CL1_1455 hypothetical protein K09736 K09736; uncharacterized protein D CL1_0908 hypothetical protein K09737 K09737; uncharacterized protein D CL1_1496 hypothetical protein K09738 K09738; uncharacterized protein D CL1_0310 hypothetical protein K09742 K09742; uncharacterized protein D CL1_0716 replication factor A complex, RPA32 subunit K09746 K09746; uncharacterized protein D CL1_1260 putative phosphate transport regulator K07220 K07220; uncharacterized protein D CL1_1159 phosphate transport system regulator PhoU K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 12, 2024