+D GENES KO #

  KEGG Orthology (KO) - Thalassolituus oleivorans MIL-1

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tol00010] D TOL_3006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TOL_0667 inositol phosphatase/fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D TOL_3268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D TOL_2721 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D TOL_2077 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D TOL_3269 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TOL_2978 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D TOL_3076 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TOL_1629 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D TOL_0706 Pyruvate dehydrogenase complex, dehydrogenase (E1) component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D TOL_0707 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_3015 putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D TOL_3305 Alcohol dehydrogenase GroES-like domain family K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_3274 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D TOL_1092 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TOL_1752 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TOL_2401 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D TOL_3635 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:tol00020] D TOL_1489 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D TOL_1693 acnA gene product K01681 ACO; aconitate hydratase [EC:4.2.1.3] D TOL_1963 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D TOL_1956 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D TOL_1798 isocitrate dehydrogenase, NADP-dependent,monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D TOL_1494 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D TOL_1495 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_1498 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D TOL_1497 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D TOL_1492 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D TOL_1493 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D TOL_1490 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D TOL_1491 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D TOL_0619 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D TOL_3154 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D TOL_0759 malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D TOL_1426 malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D TOL_3176 2-oxoglutarate carboxylase small subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D TOL_3175 pyruvate or oxaloacetate carboxylase decarboxylase subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D TOL_3635 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D TOL_0706 Pyruvate dehydrogenase complex, dehydrogenase (E1) component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D TOL_0707 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:tol00030] D TOL_3006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TOL_2115 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D TOL_2114 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D TOL_2698 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D TOL_3161 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D TOL_1805 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D TOL_3557 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D TOL_1752 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TOL_0829 Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TOL_2703 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TOL_2113 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D TOL_2112 bifunctional KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D TOL_3268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D TOL_0667 inositol phosphatase/fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:tol00040] D TOL_1764 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_2538 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_2117 galU gene product K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TOL_2698 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:tol00051] D TOL_0697 ROK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D TOL_2551 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K01840 manB; phosphomannomutase [EC:5.4.2.8] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TOL_2552 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D TOL_2566 GDP-mannose-4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D TOL_2565 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D TOL_2107 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D TOL_0667 inositol phosphatase/fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D TOL_3268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D TOL_2721 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:tol00052] D TOL_2264 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TOL_2117 galU gene product K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TOL_1752 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism [PATH:tol00053] D TOL_1764 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_2538 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_1903 UDP-galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:tol00500] D TOL_2111 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D TOL_2117 galU gene product K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TOL_1729 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D TOL_1752 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TOL_3006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TOL_0697 ROK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tol00520] D TOL_2083 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D TOL_0697 ROK K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D TOL_0072 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TOL_2722 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D TOL_3367 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D TOL_0316 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D TOL_2294 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D TOL_0602 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D TOL_0603 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D TOL_3089 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D TOL_1874 UDP-N-acetylenolpyruvoylglucosamine reductase,FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D TOL_1752 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TOL_2117 galU gene product K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TOL_1764 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_2538 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_2264 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TOL_1903 UDP-galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D TOL_3006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TOL_2551 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K01840 manB; phosphomannomutase [EC:5.4.2.8] D TOL_2552 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D TOL_2566 GDP-mannose-4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D TOL_2565 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D TOL_3656 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] C 00620 Pyruvate metabolism [PATH:tol00620] D TOL_1092 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TOL_0706 Pyruvate dehydrogenase complex, dehydrogenase (E1) component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D TOL_0707 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_3015 putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D TOL_3305 Alcohol dehydrogenase GroES-like domain family K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D TOL_1056 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D TOL_1525 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1055 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_3274 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D TOL_2364 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D TOL_1501 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D TOL_1975 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D TOL_3207 metal-binding hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D TOL_3623 Malic enzyme, NAD-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D TOL_2690 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D TOL_2689 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TOL_2691 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D TOL_3176 2-oxoglutarate carboxylase small subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D TOL_3175 pyruvate or oxaloacetate carboxylase decarboxylase subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D TOL_0759 malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D TOL_1426 malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D TOL_0619 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D TOL_3154 fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D TOL_0931 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D TOL_3635 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D TOL_1629 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D TOL_1892 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0328 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D TOL_2652 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tol00630] D TOL_2424 Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D TOL_1092 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TOL_1892 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D TOL_1489 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D TOL_1693 acnA gene product K01681 ACO; aconitate hydratase [EC:4.2.1.3] D TOL_1963 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D TOL_1956 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_1677 hypothetical protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D TOL_1608 enoyl-CoA hydratase, R-specific K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D TOL_1323 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D TOL_1642 hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D TOL_2697 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D TOL_3181 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D TOL_1467 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_2411 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3620 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3136 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TOL_0769 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D TOL_0771 gcvT gene product K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_0770 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D TOL_0999 Hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D TOL_2106 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D TOL_2112 bifunctional KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D TOL_0632 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D TOL_2679 fomramidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:tol00640] D TOL_1092 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TOL_1519 PrpE protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D TOL_1056 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D TOL_1525 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1055 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_1836 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_1497 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D TOL_1498 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D TOL_1636 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D TOL_1637 probable aconitate hydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D TOL_1639 putative AcnD-accessory protein PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D TOL_1956 aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D TOL_1635 prpB gene product K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] C 00650 Butanoate metabolism [PATH:tol00650] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_2774 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_1608 enoyl-CoA hydratase, R-specific K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D TOL_2313 Poly(3-hydroxyalkanoate) synthetase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D TOL_3547 poly-beta-hydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D TOL_1677 hypothetical protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D TOL_2689 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TOL_1492 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D TOL_1493 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D TOL_1490 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D TOL_1491 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D TOL_1521 adenylosuccinate lyase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D TOL_2861 acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D TOL_2860 acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tol00660] D TOL_2861 acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D TOL_2860 acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D TOL_1497 succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D TOL_1498 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D TOL_1528 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D TOL_1529 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D TOL_1530 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tol00562] D TOL_0943 extragenic suppressor protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D TOL_3353 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D TOL_2255 3-phytase K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D TOL_2721 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tol00190] D TOL_0441 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D TOL_1492 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D TOL_1493 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D TOL_1490 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D TOL_1491 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D TOL_0401 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D TOL_1730 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D TOL_0402 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D TOL_0403 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D TOL_1999 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D TOL_2000 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D TOL_2001 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D TOL_2002 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D TOL_3414 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D TOL_3413 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D TOL_3412 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D TOL_3697 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D TOL_3695 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D TOL_1681 H+-transporting two-sector ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D TOL_3696 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D TOL_3698 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D TOL_3694 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D TOL_3701 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D TOL_3699 F0F1-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D TOL_3700 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D TOL_0661 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D TOL_3560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:tol00680] D TOL_3015 putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D TOL_3014 carboxyl esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D TOL_3136 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TOL_1323 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D TOL_3076 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TOL_0931 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D TOL_3268 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D TOL_0667 inositol phosphatase/fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D TOL_1056 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D TOL_1525 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1055 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1092 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TOL_1629 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D TOL_2978 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D TOL_3245 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TOL_2289 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D TOL_3048 Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D TOL_1620 phosphoserine phosphatase/homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:tol00910] D TOL_2679 fomramidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D TOL_1449 nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D TOL_1456 Tat pathway signal sequence domain protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D TOL_1455 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D TOL_1454 nitrate transporter system, ATPase component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D TOL_1446 Molybdopterin oxidoreductase Fe4S4 domain family K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D TOL_1452 hypothetical protein K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D TOL_1447 putative NAD(P)H-nitrite reductase, large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D TOL_1448 nitrite reductase (NAD(P)H), small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D TOL_0527 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D TOL_1193 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D TOL_1467 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_2411 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3620 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3234 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D TOL_3233 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TOL_3690 cyanate lyase K01725 cynS; cyanate lyase [EC:4.2.1.104] D TOL_3174 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:tol00920] D TOL_1293 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D TOL_1294 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_3714 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_2575 adenylylsulfate kinase family protein K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D TOL_1619 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D TOL_2640 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase/FAD synthetase-like protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D TOL_1833 Sulfite reductase, beta subunit (hemoprotein) K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D TOL_0838 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4] D TOL_3037 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D TOL_0595 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D TOL_0945 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_2211 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_2203 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_1051 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D TOL_3531 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D TOL_1543 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D TOL_0524 medium-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D TOL_3545 medium-chain acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D TOL_0644 probable acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D TOL_2037 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D TOL_2773 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D TOL_0643 Acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tol00061] D TOL_1649 acyl carrier protein K02078 acpP; acyl carrier protein D TOL_2210 acyl carrier protein K02078 acpP; acyl carrier protein D TOL_1647 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D TOL_1990 Beta-ketoacyl synthase, C-terminal domain protein K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D TOL_1476 3-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D TOL_1239 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_1648 fabG gene product K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_0712 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_2435 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D TOL_1847 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D TOL_3357 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D TOL_1609 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2208 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2038 acyl-CoA synthase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tol00071] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_1158 Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_2774 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D TOL_2156 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D TOL_0043 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D TOL_0715 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D TOL_2609 acyl-coenzyme A dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D TOL_1609 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2208 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2038 acyl-CoA synthase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_1423 alkB1 gene product K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D TOL_1175 Fatty acid desaturase domain protein K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D TOL_0163 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D TOL_3015 putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:tol00561] D TOL_2106 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_2466 glpK gene product K00864 glpK; glycerol kinase [EC:2.7.1.30] D TOL_0939 Glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D TOL_1646 hypothetical protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D TOL_0017 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D TOL_3555 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D TOL_3355 lactonizing lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D TOL_0381 hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D TOL_3266 lipase family protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:tol00564] D TOL_1825 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D TOL_1484 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D TOL_0939 Glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D TOL_0017 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D TOL_3555 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D TOL_2367 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D TOL_1832 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D TOL_1173 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D TOL_2664 ethanolamine ammonia-lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D TOL_2663 ethanolamine ammonia-lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D TOL_2441 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D TOL_3258 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D TOL_0111 hypothetical protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D TOL_3038 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D TOL_1774 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D TOL_3211 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D TOL_2033 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:tol00565] D TOL_2367 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D TOL_2367 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism [PATH:tol00591] D TOL_2367 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D TOL_2040 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] C 00592 alpha-Linolenic acid metabolism [PATH:tol00592] D TOL_2367 phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D TOL_1158 Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:tol01040] D TOL_2070 Stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D TOL_2810 Fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D TOL_2422 putative fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D TOL_2423 putative Oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D TOL_0248 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D TOL_1257 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D TOL_0141 hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tol00230] D TOL_0032 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D TOL_1118 MutT/NUDIX family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D TOL_3631 MutT/nudix family protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D TOL_1752 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TOL_0829 Phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TOL_2703 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D TOL_1542 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D TOL_2856 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D TOL_2261 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D TOL_1373 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D TOL_2643 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D TOL_2260 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D TOL_2160 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D TOL_2159 phosphoribosylaminoimidazole carboxylase,catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D TOL_2127 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D TOL_1898 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D TOL_2855 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D TOL_2248 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D TOL_3061 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D TOL_3632 hydrolase, HAD-superfamily, subfamily IA, variant 3 K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D TOL_2682 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D TOL_2862 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D TOL_1349 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D TOL_1265 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D TOL_0948 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D TOL_3534 putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D TOL_3285 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4] D TOL_3284 xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4] D TOL_1266 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TOL_3278 guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D TOL_0177 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D TOL_2471 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TOL_2472 ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D TOL_1110 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D TOL_0175 spoT gene product K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D TOL_3561 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D TOL_0929 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D TOL_3050 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D TOL_3661 Adenylate cyclase, family 3 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D TOL_1937 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D TOL_3070 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D TOL_0263 hypothetical protein K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D TOL_3019 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D TOL_3290 putative adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D TOL_0629 decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D TOL_2420 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2] D TOL_2837 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D TOL_0933 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D TOL_0930 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D TOL_0030 3',5' cAMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D TOL_0596 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D TOL_2575 adenylylsulfate kinase family protein K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D TOL_1293 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D TOL_1294 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_3714 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_3280 putative transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] D TOL_3281 putative OHCU decarboxylase K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97] D TOL_3276 putative urate catabolism protein K16842 hpxB; allantoinase [EC:3.5.2.5] D TOL_3282 Allantoicase K01477 alc; allantoicase [EC:3.5.3.4] D TOL_3279 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3] D TOL_0967 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D TOL_0968 Urea amidohydrolase (urease) beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D TOL_0969 Urease, gamma subunit region K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:tol00240] D TOL_2732 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D TOL_2733 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D TOL_0265 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D TOL_0264 dihydroorotase-like protein K01465 URA4; dihydroorotase [EC:3.5.2.3] D TOL_2395 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D TOL_1196 dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D TOL_0204 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D TOL_2281 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D TOL_2444 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D TOL_0948 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D TOL_0930 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D TOL_3110 hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D TOL_2375 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D TOL_3077 CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D TOL_2285 hypothetical protein K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D TOL_2248 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D TOL_3061 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D TOL_2682 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D TOL_0266 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D TOL_2837 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D TOL_0629 decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D TOL_1201 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D TOL_2263 deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D TOL_2471 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TOL_2472 ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D TOL_1652 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D TOL_0209 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D TOL_2704 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D TOL_3596 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tol00250] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_0913 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D TOL_1067 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D TOL_1951 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D TOL_1466 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D TOL_2393 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D TOL_3678 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D TOL_3019 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D TOL_1898 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D TOL_0265 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D TOL_1521 adenylosuccinate lyase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D TOL_3234 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D TOL_3233 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D TOL_1193 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D TOL_2050 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D TOL_1467 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_2411 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3620 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_2732 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D TOL_2733 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D TOL_0072 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TOL_1542 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:tol00260] D TOL_0447 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_3539 Aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_1531 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D TOL_2405 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D TOL_0085 Homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D TOL_1620 phosphoserine phosphatase/homoserine phosphotransferase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D TOL_0990 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D TOL_3136 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TOL_1323 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D TOL_2978 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D TOL_2106 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D TOL_3245 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TOL_2289 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D TOL_3048 Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D TOL_0769 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D TOL_0771 gcvT gene product K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_0770 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D TOL_3258 phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D TOL_3556 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D TOL_1538 tryptophan synthase K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D TOL_1537 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D TOL_1523 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D TOL_3541 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D TOL_3542 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D TOL_3540 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:tol00270] D TOL_0945 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_2211 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_2203 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_1051 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D TOL_1830 metH gene product K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D TOL_1380 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D TOL_0289 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D TOL_0656 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D TOL_0066 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D TOL_0021 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D TOL_2862 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D TOL_2292 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D TOL_2082 5'-methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D TOL_3007 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D TOL_3008 sugar aldolase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D TOL_3010 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D TOL_3009 ARD/ARD' family K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D TOL_0288 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D TOL_1133 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D TOL_0447 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_3539 Aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_1531 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D TOL_2405 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D TOL_3531 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D TOL_1543 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D TOL_0297 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D TOL_3637 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D TOL_0270 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_3037 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D TOL_0927 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D TOL_3245 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TOL_2289 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:tol00280] D TOL_0297 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_2156 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D TOL_0043 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_1158 Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tol00290] D TOL_3556 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D TOL_1528 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D TOL_1529 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D TOL_1530 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D TOL_2861 acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D TOL_2860 acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D TOL_3260 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D TOL_0360 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D TOL_0297 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D TOL_1951 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D TOL_0328 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D TOL_2652 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tol00300] D TOL_2405 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D TOL_0447 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_3539 Aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_1531 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D TOL_2130 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D TOL_2737 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D TOL_2359 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D TOL_2463 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D TOL_3262 hypothetical protein K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D TOL_1347 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TOL_0260 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D TOL_0261 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D TOL_0797 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D TOL_0798 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:tol00310] D TOL_1495 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_1521 adenylosuccinate lyase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:tol00220] D TOL_2464 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D TOL_2393 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D TOL_3678 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D TOL_2418 urea carboxylase/allophanate hydrolase K01941 uca; urea carboxylase [EC:6.3.4.6] D TOL_3578 amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D TOL_0967 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D TOL_0968 Urea amidohydrolase (urease) beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D TOL_0969 Urease, gamma subunit region K01430 ureA; urease subunit gamma [EC:3.5.1.5] D TOL_1467 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_2411 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3620 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_1193 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_1951 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D TOL_3584 argA gene product K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D TOL_0811 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D TOL_0207 Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D TOL_0311 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D TOL_2463 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D TOL_3583 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:tol00330] D TOL_2412 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D TOL_1201 cytosine deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21] D TOL_0882 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D TOL_0066 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D TOL_0021 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D TOL_0656 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_1384 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_2677 acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_3528 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D TOL_2050 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D TOL_2884 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D TOL_2907 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:tol00340] D TOL_3088 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D TOL_3020 hisZ gene product K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D TOL_0235 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D TOL_0236 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D TOL_0357 1-(5-phosphoribosyl)-5-imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D TOL_0356 imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D TOL_0358 Imidazoleglycerol-phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D TOL_0355 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D TOL_3086 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_2287 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_3087 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_3374 hypothetical protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:tol00350] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_3086 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_2287 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_3015 putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D TOL_1521 adenylosuccinate lyase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:tol00360] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_3086 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_2287 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_3507 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D TOL_1384 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_2677 acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:tol00380] D TOL_1495 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_1384 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_2677 acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_3507 catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tol00400] D TOL_1615 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D TOL_3236 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D TOL_2850 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D TOL_0114 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D TOL_3237 hypothetical protein K00891 aroK; shikimate kinase [EC:2.7.1.71] D TOL_2286 hypothetical protein K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D TOL_2317 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D TOL_0649 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D TOL_0650 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D TOL_0651 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D TOL_1536 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D TOL_0652 trpC gene product K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D TOL_1538 tryptophan synthase K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D TOL_1537 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D TOL_2288 P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D TOL_2105 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_3086 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_2287 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tol00410] D TOL_3005 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_3004 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:tol00430] D TOL_0218 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D TOL_1466 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D TOL_1193 NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D TOL_1525 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1055 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D TOL_1056 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tol00450] D TOL_1830 metH gene product K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D TOL_1380 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D TOL_2350 selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D TOL_2613 thioredoxin reductase, FAD/NAD(P)-binding K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D TOL_1293 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D TOL_1294 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_3714 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_2221 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D TOL_0971 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:tol00460] D TOL_0218 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D TOL_1067 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D TOL_3136 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TOL_2679 fomramidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:tol00470] D TOL_3309 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D TOL_0804 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TOL_2031 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D TOL_0800 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D TOL_0260 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D TOL_0261 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:tol00480] D TOL_0218 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D TOL_2845 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] D TOL_3637 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D TOL_0270 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3] D TOL_1271 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D TOL_3172 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D TOL_1140 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D TOL_0294 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D TOL_0747 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D TOL_2332 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D TOL_1754 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D TOL_1798 isocitrate dehydrogenase, NADP-dependent,monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D TOL_2115 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D TOL_1949 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D TOL_2337 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D TOL_0673 hybrid peroxiredoxin hyPrx5 K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27] D TOL_0882 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D TOL_0066 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D TOL_0021 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:tol00540] D TOL_2434 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D TOL_0808 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D TOL_2436 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D TOL_1873 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D TOL_2433 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D TOL_1877 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D TOL_3096 sugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D TOL_2563 carbohydrate isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D TOL_2883 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D TOL_1904 HAD-superfamily hydrolase subfamily IIIA:Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D TOL_1902 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D TOL_0034 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D TOL_0131 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D TOL_0037 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D TOL_0840 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D TOL_2193 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D TOL_0035 bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D TOL_0018 histidinol phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D TOL_0036 rfaD gene product K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D TOL_2206 kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] D TOL_2195 nucleoside-diphosphate-sugar pyrophosphorylase K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71] D TOL_1482 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D TOL_0282 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D TOL_0284 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tol00541] D TOL_2117 galU gene product K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D TOL_2264 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D TOL_1764 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_2538 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D TOL_1903 UDP-galacturonate 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D TOL_2541 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TOL_2542 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TOL_2540 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TOL_0677 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D TOL_2539 dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D TOL_3656 hypothetical protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D TOL_2551 phosphoglucomutase/phosphomannomutase alpha/beta/subunit K01840 manB; phosphomannomutase [EC:5.4.2.8] D TOL_2552 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D TOL_2566 GDP-mannose-4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D TOL_2565 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D TOL_3367 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D TOL_2266 putative epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00550 Peptidoglycan biosynthesis [PATH:tol00550] D TOL_3089 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D TOL_1874 UDP-N-acetylenolpyruvoylglucosamine reductase,FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D TOL_0803 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D TOL_0800 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D TOL_0797 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D TOL_0804 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TOL_0798 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D TOL_2442 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D TOL_0937 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D TOL_2935 PA-phosphatase-like phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D TOL_0799 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D TOL_0802 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D TOL_3243 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TOL_0304 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D TOL_3474 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D TOL_2911 Cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D TOL_0796 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D TOL_2896 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:tol00552] D TOL_0937 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D TOL_2935 PA-phosphatase-like phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D TOL_2266 putative epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:tol00543] D TOL_2536 EpsT K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D TOL_2567 putative glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D TOL_2568 putative acyl transferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D TOL_2212 serine acetyltransferase K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D TOL_2984 membrane bound O-acyl transferase, MBOAT K19294 algI; alginate O-acetyltransferase complex protein AlgI D TOL_3588 membrane bound O-acyl transferase, MBOAT K19294 algI; alginate O-acetyltransferase complex protein AlgI D TOL_0945 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_2211 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D TOL_2203 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tol00730] D TOL_2096 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D TOL_2092 hypothetical protein K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D TOL_0947 cysteine desulfurase used in synthesis of Fe-S cluster (tRNA4-thiouridine sulfur transferase) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TOL_1675 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TOL_2095 thiamine biosynthesis protein ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D TOL_3216 hypothetical protein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D TOL_2093 Thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10] D TOL_3148 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D TOL_3033 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D TOL_0628 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D TOL_0089 hypothetical protein K07251 thiK; thiamine kinase [EC:2.7.1.89] D TOL_0933 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tol00740] D TOL_3213 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D TOL_3145 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D TOL_3143 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D TOL_0258 HAD superfamily hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D TOL_0740 RibH-2, riboflavin synthase, beta subunit K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D TOL_3146 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D TOL_1211 lumazine protein K00793 ribE; riboflavin synthase [EC:2.5.1.9] D TOL_3144 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D TOL_2880 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D TOL_0032 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D TOL_1118 MutT/NUDIX family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D TOL_0669 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:tol00750] D TOL_1275 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D TOL_3270 glyceraldehyde 3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D TOL_1953 Erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D TOL_2289 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D TOL_0599 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D TOL_0924 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D TOL_0990 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:tol00760] D TOL_0913 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D TOL_2134 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D TOL_0693 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D TOL_2248 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D TOL_3061 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D TOL_2908 Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D TOL_0930 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D TOL_2866 NAD synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D TOL_0437 CinA domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D TOL_1209 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D TOL_1135 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D TOL_1808 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D TOL_1427 pyridine nucleotide transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D TOL_1428 nicotinamide nucleotide transhydrogenase, subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D TOL_1429 H+-translocating transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D TOL_1521 adenylosuccinate lyase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:tol00770] D TOL_2861 acetolactate synthase, large subunit,biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D TOL_2860 acetolactate synthase, small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D TOL_3260 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D TOL_0360 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D TOL_3003 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D TOL_0520 ketopantoate reductase oxidoreductase protein (panE) K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D TOL_2829 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D TOL_3004 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D TOL_3472 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D TOL_0210 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D TOL_0930 MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D TOL_0220 coaD gene product K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D TOL_0688 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D TOL_0925 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D TOL_0297 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D TOL_3005 aspartate alpha-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:tol00780] D TOL_0779 hypothetical protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D TOL_1476 3-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D TOL_1239 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_1648 fabG gene product K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_0712 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_2435 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D TOL_1847 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D TOL_0780 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D TOL_0781 adenosylmethionine--8-amino-7-oxononanoate transaminase (DAPA aminotransferase) K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D TOL_0778 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D TOL_0640 bioF K01012 bioB; biotin synthase [EC:2.8.1.6] D TOL_3473 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:tol00785] D TOL_2894 lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D TOL_2893 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_0706 Pyruvate dehydrogenase complex, dehydrogenase (E1) component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D TOL_0707 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D TOL_1494 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D TOL_1495 2-oxoglutarate dehydrogenase, E2 component,dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D TOL_0769 glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D TOL_0771 gcvT gene product K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TOL_0770 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tol00790] D TOL_2032 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D TOL_0628 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D TOL_0878 alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D TOL_2191 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D TOL_3166 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D TOL_0584 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D TOL_0585 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D TOL_1023 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D TOL_3002 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D TOL_2723 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D TOL_3595 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D TOL_1539 folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D TOL_3213 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D TOL_3145 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D TOL_1621 hypothetical protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D TOL_1650 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D TOL_1022 Short chain dehydrogenase/reductase family protein K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D TOL_0620 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D TOL_2457 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D TOL_2456 putative regulator protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D TOL_1938 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D TOL_3519 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D TOL_3522 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D TOL_3524 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D TOL_3521 Molybdopterin biosynthesis enzyme K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D TOL_3131 Putative molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D TOL_0525 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D TOL_3520 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tol00670] D TOL_3595 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D TOL_1022 Short chain dehydrogenase/reductase family protein K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D TOL_1858 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D TOL_3136 Glycine/serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D TOL_2261 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D TOL_2855 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D TOL_0121 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D TOL_0771 gcvT gene product K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D TOL_1830 metH gene product K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D TOL_3596 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D TOL_0632 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D TOL_3615 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tol00860] D TOL_1907 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TOL_0834 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D TOL_0308 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D TOL_3559 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D TOL_3675 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D TOL_3674 hypothetical protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D TOL_3231 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D TOL_0115 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D TOL_1065 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D TOL_0309 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D TOL_0876 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D TOL_3673 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D TOL_1786 Uroporphyrin-III C-methyltransferase-like protein K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D TOL_1445 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D TOL_2806 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D TOL_2832 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D TOL_0705 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D TOL_0703 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D TOL_0869 cobalamin biosynthesis protein CobD/CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D TOL_0870 l-threonine-o-3-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC D TOL_0699 cobalbumin biosynthesis protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D TOL_0702 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D TOL_0700 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D TOL_0701 Phosphoglycerate/bisphosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D TOL_0992 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D TOL_0993 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tol00130] D TOL_0160 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D TOL_3655 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D TOL_0669 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D TOL_3608 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D TOL_2293 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D TOL_3609 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D TOL_0239 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D TOL_2859 ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D TOL_0230 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D TOL_2327 flavoprotein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D TOL_1168 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tol00900] D TOL_3216 hypothetical protein K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D TOL_2440 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D TOL_3064 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D TOL_0831 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D TOL_3063 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D TOL_0951 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D TOL_2876 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0669 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D TOL_3217 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D TOL_2888 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D TOL_2442 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:tol00903] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D TOL_3423 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:tol00907] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_3305 Alcohol dehydrogenase GroES-like domain family K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D TOL_1158 Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D TOL_3161 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products D TOL_2603 hypothetical protein K05555 actIV; cyclase [EC:4.-.-.-] C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tol00523] D TOL_2541 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TOL_2542 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TOL_2540 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TOL_0677 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D TOL_2539 dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:tol01055] D TOL_2765 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D TOL_2542 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:tol00332] D TOL_2884 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D TOL_2907 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tol00261] D TOL_2765 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D TOL_1293 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D TOL_1294 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_3714 sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D TOL_0447 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_3539 Aspartate/glutamate/uridylate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D TOL_1531 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D TOL_2130 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D TOL_2737 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tol00521] D TOL_1752 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D TOL_0208 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D TOL_0943 extragenic suppressor protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D TOL_3353 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D TOL_2541 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TOL_2542 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D TOL_2540 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D TOL_0677 hypothetical protein K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D TOL_2539 dTDP-6-deoxy-L-mannose-dehydrogenase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:tol00525] D TOL_2541 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D TOL_2542 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:tol00401] D TOL_2286 hypothetical protein K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_3086 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_2287 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D TOL_0649 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D TOL_0650 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D TOL_1647 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D TOL_1239 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_1648 fabG gene product K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_0712 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_1847 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D TOL_1649 acyl carrier protein K02078 acpP; acyl carrier protein D TOL_2210 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tol00999] D TOL_0289 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D TOL_0114 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites [PATH:tol00997] D TOL_3184 pyoverdine biosynthesis protein K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24] D TOL_3183 hypothetical protein K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:tol00362] D TOL_1158 Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_2774 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D TOL_2689 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:tol00627] D TOL_0722 flavin-binding family monooxygenase K10215 ethA; monooxygenase [EC:1.14.13.-] D TOL_0709 flavin-binding family monooxygenase K10215 ethA; monooxygenase [EC:1.14.13.-] D TOL_1384 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_2677 acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_0669 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:tol00625] D TOL_3015 putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D TOL_1421 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:tol00633] D TOL_1169 12-oxophytodienoate reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D TOL_1158 Acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:tol00643] D TOL_1384 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D TOL_2677 acylamide amidohydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation [PATH:tol00791] D TOL_3578 amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D TOL_2418 urea carboxylase/allophanate hydrolase K01941 uca; urea carboxylase [EC:6.3.4.6] D TOL_0967 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D TOL_0968 Urea amidohydrolase (urease) beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D TOL_0969 Urease, gamma subunit region K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:tol00930] D TOL_1423 alkB1 gene product K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D TOL_1175 Fatty acid desaturase domain protein K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D TOL_3423 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D TOL_1157 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D TOL_0717 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:tol00626] D TOL_3015 putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation D TOL_0082 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D TOL_3041 hypothetical protein K03333 choD; cholesterol oxidase [EC:1.1.3.6] D TOL_3265 cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tol03020] D TOL_3457 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D TOL_3456 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D TOL_3425 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D TOL_0176 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tol03010] D TOL_2284 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D TOL_2446 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D TOL_3444 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D TOL_3426 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D TOL_3433 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D TOL_3345 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D TOL_3454 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D TOL_3436 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D TOL_0400 rpsI gene product K02996 RP-S9; small subunit ribosomal protein S9 D TOL_3451 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D TOL_3427 rpsK gene product K02948 RP-S11; small subunit ribosomal protein S11 D TOL_3455 30S ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12 D TOL_3428 rpsM gene product K02952 RP-S13; small subunit ribosomal protein S13 D TOL_3437 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D TOL_2713 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D TOL_2628 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D TOL_3441 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D TOL_3344 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D TOL_3446 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D TOL_2882 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D TOL_0582 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D TOL_3460 rplA gene product K02863 RP-L1; large subunit ribosomal protein L1 D TOL_3447 rplB gene product K02886 RP-L2; large subunit ribosomal protein L2 D TOL_3450 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D TOL_3449 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D TOL_3438 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D TOL_3435 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D TOL_3458 50S ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12 D TOL_3342 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D TOL_3459 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D TOL_3461 rplK gene product K02867 RP-L11; large subunit ribosomal protein L11 D TOL_0399 rplM gene product K02871 RP-L13; large subunit ribosomal protein L13 D TOL_3440 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D TOL_3431 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D TOL_3443 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D TOL_3424 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D TOL_3434 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D TOL_2625 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D TOL_2186 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D TOL_2887 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D TOL_3445 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D TOL_3448 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D TOL_3439 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D TOL_0828 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D TOL_2886 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D TOL_0213 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D TOL_3442 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D TOL_3432 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D TOL_3209 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D TOL_1645 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D TOL_0214 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D TOL_3731 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D TOL_2187 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D TOL_3429 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D TOL_2455 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_3255 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_3252 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_0319 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_0322 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_3254 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_3251 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_2454 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_2453 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_3253 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_0323 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_3250 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tol00970] D TOL_1906 tRNA_Ala(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TOL_0321 tRNA_Ala(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TOL_3494 tRNA_Arg(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_0450 tRNA_Arg(ACG)1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_0451 tRNA_Arg(ACG)2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_1856 tRNA_Arg(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_2601 tRNA_Arg(CCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_2118 tRNA_Asn(GTT)1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TOL_2265 tRNA_Asn(GTT)2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TOL_1849 tRNA_Asp(GTC)4; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1146 tRNA_Asp(GTC)1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1148 tRNA_Asp(GTC)2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1150 tRNA_Asp(GTC)3; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1772 tRNA_Cys(GCA); tRNA-Cys K14222 tRNA-Cys; tRNA Cys D TOL_0830 tRNA_Gln(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TOL_1905 tRNA_Glu(TTC)1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TOL_1946 tRNA_Glu(TTC)3; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TOL_1944 tRNA_Glu(TTC)2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TOL_1773 tRNA_Gly(GCC)1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_1945 tRNA_Gly(GCC)3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_1943 tRNA_Gly(GCC)2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_3469 tRNA_Gly(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_1855 tRNA_His(GTG); tRNA-His K14226 tRNA-His; tRNA His D TOL_0320 tRNA_Ile(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile D TOL_1309 tRNA_Leu(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_2719 tRNA_Leu(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_1308 tRNA_Leu(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_1771 tRNA_Leu(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_3627 tRNA_Leu(TAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_2135 tRNA_Lys(TTT)1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TOL_2136 tRNA_Lys(TTT)2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TOL_1020 tRNA_iMet(CAT)1; tRNA-Met K14230 tRNA-Met; tRNA Met D TOL_1021 tRNA_iMet(CAT)2; tRNA-Met K14230 tRNA-Met; tRNA Met D TOL_0578 tRNA_Ile(CAT); tRNA-Ile K14230 tRNA-Met; tRNA Met D TOL_1292 tRNA_Met(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met D TOL_0349 tRNA_Phe(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe D TOL_1857 tRNA_Pro(TGG)1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TOL_2119 tRNA_Pro(TGG)2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TOL_2181 tRNA_Pro(GGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TOL_1935 tRNA_Ser(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TOL_0449 tRNA_Ser(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TOL_1779 tRNA_Ser(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TOL_0152 tRNA_Thr(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TOL_3468 tRNA_Thr(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TOL_3464 tRNA_Trp(CCA); tRNA-Trp K14235 tRNA-Trp; tRNA Trp D TOL_3470 tRNA_Tyr(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D TOL_1147 tRNA_Val(TAC)1; tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_1149 tRNA_Val(TAC)2; tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_1151 tRNA_Val(TAC)3; tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_2251 tRNA_Val(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_1907 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TOL_3115 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D TOL_3116 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D TOL_3114 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D TOL_1871 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D TOL_0446 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TOL_1972 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TOL_0020 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D TOL_0019 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D TOL_2189 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TOL_1787 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TOL_1870 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TOL_0971 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TOL_0121 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D TOL_1343 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TOL_0681 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TOL_2879 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TOL_2525 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D TOL_0336 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TOL_1434 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TOL_0952 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TOL_2185 pheS gene product K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TOL_2184 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TOL_0318 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TOL_2300 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TOL_2301 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tol03060] D TOL_3430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TOL_3463 translocase K03073 secE; preprotein translocase subunit SecE D TOL_2720 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D TOL_1313 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D TOL_1314 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D TOL_1312 YajC K03210 yajC; preprotein translocase subunit YajC D TOL_3729 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D TOL_0810 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TOL_2976 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D TOL_0974 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D TOL_1584 ffs; bacterial small signal recognition particle RNA K01983 ffs; SRP RNA D TOL_0136 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D TOL_0233 tatA gene product K03116 tatA; sec-independent protein translocase protein TatA D TOL_0232 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D TOL_0231 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC D TOL_1113 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D TOL_2878 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tol04122] D TOL_0947 cysteine desulfurase used in synthesis of Fe-S cluster (tRNA4-thiouridine sulfur transferase) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TOL_3037 Rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D TOL_1243 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D TOL_2132 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D TOL_1782 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D TOL_1781 hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D TOL_1780 tusD; sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D TOL_1783 protein DsrC K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D TOL_1801 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D TOL_3524 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D TOL_3519 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D TOL_3523 hypothetical protein K03636 moaD; sulfur-carrier protein D TOL_0837 moeB gene product K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D TOL_3522 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D TOL_3521 Molybdopterin biosynthesis enzyme K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D TOL_1675 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] C 03050 Proteasome C 03018 RNA degradation [PATH:tol03018] D TOL_3603 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D TOL_1640 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D TOL_1567 ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D TOL_3076 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TOL_2711 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D TOL_0736 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D TOL_0255 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D TOL_2047 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D TOL_3200 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D TOL_2681 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TOL_0338 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TOL_3563 transcription termination factor Rho K03628 rho; transcription termination factor Rho D TOL_0362 predicted metal-dependent RNase K12574 rnj; ribonuclease J [EC:3.1.-.-] D TOL_2739 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TOL_0725 RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60 chaperonin 60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TOL_3025 uncharacterized host factor I protein K03666 hfq; host factor-I protein D TOL_3560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D TOL_3001 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tol03030] D TOL_1842 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1098 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_0743 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TOL_1585 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TOL_1653 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D TOL_0679 holA gene product K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TOL_1345 holC gene product K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D TOL_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TOL_3341 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D TOL_0580 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D TOL_3056 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TOL_1843 RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D TOL_2432 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D TOL_0083 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TOL_1179 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tol03410] D TOL_2363 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D TOL_2524 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D TOL_0351 mutY gene product K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D TOL_0215 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D TOL_1436 DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D TOL_0203 Exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D TOL_1670 xthA gene product K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D TOL_0083 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TOL_1025 recJ gene product K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TOL_1179 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tol03420] D TOL_2078 hypothetical protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D TOL_3053 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D TOL_2256 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D TOL_1775 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D TOL_2657 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TOL_3565 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TOL_0083 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TOL_1179 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tol03430] D TOL_3129 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D TOL_3027 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D TOL_2657 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TOL_3565 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TOL_1247 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D TOL_1261 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D TOL_3218 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D TOL_1025 recJ gene product K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TOL_3056 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TOL_0743 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TOL_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TOL_1585 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TOL_0679 holA gene product K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TOL_1653 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D TOL_1842 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1098 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1345 holC gene product K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D TOL_1179 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tol03440] D TOL_1025 recJ gene product K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TOL_3056 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TOL_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D TOL_0923 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D TOL_1587 hypothetical protein K06187 recR; recombination protein RecR D TOL_0438 recA protein K03553 recA; recombination protein RecA D TOL_0083 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TOL_2145 Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D TOL_2144 ruvB gene product K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D TOL_2146 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D TOL_0170 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TOL_0980 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TOL_1472 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D TOL_1471 hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D TOL_1473 Exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D TOL_0743 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TOL_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TOL_1585 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TOL_0679 holA gene product K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TOL_1653 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D TOL_1842 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1098 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1345 holC gene product K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D TOL_3210 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:tol03250] D TOL_2308 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus D TOL_1037 hypothetical protein K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tol02010] D TOL_1456 Tat pathway signal sequence domain protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D TOL_1455 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D TOL_1454 nitrate transporter system, ATPase component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D TOL_2781 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D TOL_2780 molybdate ABC transporter inner membrane subunit K02018 modB; molybdate transport system permease protein D TOL_2779 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D TOL_3247 ABC molybdenum transporter, ATP-binding subunit modF K05776 modF; molybdate transport system ATP-binding protein D TOL_0302 transcription factor jumonji, jmjC K11073 potF; putrescine transport system substrate-binding protein D TOL_0299 Binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein D TOL_0300 putrescine transport protein K11075 potH; putrescine transport system permease protein D TOL_0301 putative putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D TOL_0353 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D TOL_3092 toluene tolerance ABC transporter periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D TOL_3093 organic solvents resistance ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D TOL_3091 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D TOL_3094 organic solvents resistance ABC transporter ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D TOL_2421 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D TOL_3287 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D TOL_3288 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D TOL_3286 ABC transporter ATPase K23537 nupA; general nucleoside transport system ATP-binding protein D TOL_3163 periplasmic sugar binding protein K10439 rbsB; ribose transport system substrate-binding protein D TOL_0144 ABC transporter phosphate binding periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D TOL_2018 OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein D TOL_0145 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D TOL_0146 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D TOL_0147 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D TOL_2219 hypothetical ABC-type phosphate/phosphonate transport system, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D TOL_2217 hypothetical protein K02042 phnE; phosphonate transport system permease protein D TOL_2218 ABC transporter-like protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D TOL_2672 ABC transporter periplasmic substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D TOL_3576 hypothetical protein K11959 urtA; urea transport system substrate-binding protein D TOL_2673 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein D TOL_3575 Branched-chain amino acid ABC-type transport system, permease components K11960 urtB; urea transport system permease protein D TOL_2674 urea ABC transporter permease UrtC K11961 urtC; urea transport system permease protein D TOL_3574 ABC-type branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein D TOL_2675 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D TOL_3573 uncharacterized ABC-type transport system, ATPase component K11962 urtD; urea transport system ATP-binding protein D TOL_2676 urea ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D TOL_3572 ABC-type branched-chain amino acid transport system, ATPase component K11963 urtE; urea transport system ATP-binding protein D TOL_1846 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D TOL_3376 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D TOL_3379 ABC-3 protein K09816 znuB; zinc transport system permease protein D TOL_3378 high-affinity zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D TOL_2280 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D TOL_2277 Teichoic-acid-transporting ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D TOL_1884 lolC; lipoprotein-releasing system, ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D TOL_1883 lolD; lipoprotein releasing system, ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D TOL_1075 ccmD; heme exporter subunit CcmD K02196 ccmD; heme exporter protein D D TOL_1074 ccmC; heme exporter subunit CcmC K02195 ccmC; heme exporter protein C D TOL_1073 ccmB; heme exporter subunit CcmB K02194 ccmB; heme exporter protein B D TOL_1072 ccmA; heme exporter subunit CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D TOL_1272 permease K07091 lptF; lipopolysaccharide export system permease protein D TOL_1273 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D TOL_3099 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D TOL_0138 Cell division protein K09811 ftsX; cell division transport system permease protein D TOL_0137 cell division ABC transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D TOL_1878 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D TOL_0881 putative ABC-type multidrug transport system,ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump C 02060 Phosphotransferase system (PTS) [PATH:tol02060] D TOL_3602 signal transduction protein K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D TOL_3104 Phosphocarrier protein2C nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr D TOL_3102 ptsN gene product K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:tol03070] D TOL_0033 TolC subfamily outer membrane protein K12340 tolC; outer membrane protein D TOL_0610 Type II secretory pathway, component PulD K02453 gspD; general secretion pathway protein D D TOL_0609 hypothetical protein K02452 gspC; general secretion pathway protein C D TOL_1762 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D TOL_1761 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D TOL_1760 hypothetical protein K02457 gspH; general secretion pathway protein H D TOL_1759 hypothetical protein K02458 gspI; general secretion pathway protein I D TOL_1758 hypothetical protein K02459 gspJ; general secretion pathway protein J D TOL_1757 hypothetical protein K02460 gspK; general secretion pathway protein K D TOL_1756 hypothetical protein K02461 gspL; general secretion pathway protein L D TOL_1755 hypothetical protein K02462 gspM; general secretion pathway protein M D TOL_1763 general secretory pathway component, cryptic K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D TOL_3581 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D TOL_1313 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D TOL_1314 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D TOL_3463 translocase K03073 secE; preprotein translocase subunit SecE D TOL_2720 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D TOL_3430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TOL_1312 YajC K03210 yajC; preprotein translocase subunit YajC D TOL_3729 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D TOL_0810 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TOL_0136 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D TOL_2976 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D TOL_0974 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D TOL_0233 tatA gene product K03116 tatA; sec-independent protein translocase protein TatA D TOL_0232 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D TOL_0231 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC D TOL_0387 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D TOL_0388 hemolysin-coregulated protein K11903 hcp; type VI secretion system secreted protein Hcp D TOL_0367 hypothetical protein K11906 vasD; type VI secretion system protein VasD D TOL_0370 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D TOL_0369 DotU K11892 impK; type VI secretion system protein ImpK D TOL_0379 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D TOL_0366 hypothetical protein K11913 fha1; type VI secretion system protein B B 09132 Signal transduction C 02020 Two-component system [PATH:tol02020] D TOL_0150 phoR1; sensor signal transduction histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D TOL_0158 phoR2; sensor signal transduction histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D TOL_0151 phoB1; DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D TOL_0159 phoB2; DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D TOL_0628 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D TOL_0878 alkaline phosphatase D K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D TOL_2191 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D TOL_3166 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D TOL_0144 ABC transporter phosphate binding periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D TOL_2018 OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein D TOL_3624 Signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D TOL_3625 DNA-binding response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D TOL_3360 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D TOL_2469 integral membrane sensor signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D TOL_2470 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07661 rstA; two-component system, OmpR family, response regulator RstA D TOL_0918 alginate biosynthesis negative regulator, serine protease AlgY K04771 degP; serine protease Do [EC:3.4.21.107] D TOL_0556 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_1709 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_0557 heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D TOL_1710 heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D TOL_0572 Cu(I)/Ag(I) efflux system membrane protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system D TOL_1703 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D TOL_2950 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D TOL_0573 cation efflux system protein cusA K07787 cusA; copper/silver efflux system protein D TOL_1704 Co/Zn/Cd efflux system membrane component K07787 cusA; copper/silver efflux system protein D TOL_2949 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D TOL_2530 hypothetical protein K02406 fliC; flagellin D TOL_2489 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D TOL_0624 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA D TOL_3035 Flagellar motor component K02556 motA; chemotaxis protein MotA D TOL_3219 flagellar motor protein K02556 motA; chemotaxis protein MotA D TOL_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D TOL_2818 putative TonB-dependent receptor K19611 fepA; ferric enterobactin receptor D TOL_3677 alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D TOL_3676 LytTr DNA-binding domain family K08083 algR; two-component system, LytTR family, response regulator AlgR D TOL_0926 signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D TOL_1776 gacA gene product K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D TOL_0448 carbon storage regulator K03563 csrA; carbon storage regulator D TOL_2835 hypothetical protein K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D TOL_2448 PII uridylyl-transferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D TOL_0551 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D TOL_2956 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D TOL_2957 two-component response regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D TOL_1467 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_2411 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3620 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3000 probable two-component response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_2867 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D TOL_2868 two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D TOL_3100 DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor D TOL_0692 pilin K02650 pilA; type IV pilus assembly protein PilA D TOL_2595 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TOL_2507 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TOL_1306 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0109 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D TOL_0306 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0359 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0763 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1550 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1557 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1785 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0708 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2331 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2948 probable chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D TOL_2365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2508 probable methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2467 hypothetical protein K03776 aer; aerotaxis receptor D TOL_2481 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2482 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2509 Purine-binding chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2486 probable two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2510 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2488 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2511 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2100 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2485 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_2505 two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_1486 putative CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_2596 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_0275 methylase of chemotaxis methyl-accepting protein K02661 pilK; type IV pilus assembly protein PilK D TOL_0274 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D TOL_0273 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D TOL_0276 sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D TOL_0271 hypothetical protein K02657 pilG; twitching motility two-component system response regulator PilG D TOL_0272 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH D TOL_0277 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D TOL_0278 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC D TOL_2735 hypothetical OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D TOL_3420 dctQ1; TRAP dicarboxylate transporter, nner membrane small subunit Q K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D TOL_3421 dctM1; TRAP dicarboxylate transporter, inner membrane large subunit M K11690 dctM; C4-dicarboxylate transporter, DctM subunit D TOL_2521 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D TOL_2520 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D TOL_2519 Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D TOL_0653 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D TOL_0333 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D TOL_0332 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 regA; two-component system, response regulator RegA D TOL_0401 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D TOL_1730 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D TOL_0402 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D TOL_0403 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D TOL_1999 cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D TOL_2000 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D TOL_2001 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D TOL_2002 cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D TOL_3414 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D TOL_3413 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D TOL_3412 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D TOL_0033 TolC subfamily outer membrane protein K12340 tolC; outer membrane protein D TOL_1875 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D TOL_0666 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_1581 sensory box histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_2357 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_3630 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_2502 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB D TOL_2503 two-component response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D TOL_2504 anti-sigma F factor antagonist K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D TOL_2598 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:tol04148] D TOL_0882 Ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D TOL_0401 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D TOL_1730 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tol02024] D TOL_3025 uncharacterized host factor I protein K03666 hfq; host factor-I protein D TOL_2735 hypothetical OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D TOL_0649 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D TOL_0650 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D TOL_1615 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D TOL_1268 outer membrane protein K20276 bapA; large repetitive protein D TOL_1324 outer membrane protein K20276 bapA; large repetitive protein D TOL_3511 hypothetical protein K20276 bapA; large repetitive protein D TOL_1609 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2208 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2038 acyl-CoA synthase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_0653 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D TOL_3377 zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D TOL_3213 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D TOL_3143 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D TOL_1356 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D TOL_1405 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TOL_1406 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TOL_1407 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TOL_1408 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TOL_3729 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D TOL_0049 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D TOL_2709 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D TOL_3463 translocase K03073 secE; preprotein translocase subunit SecE D TOL_2720 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D TOL_3430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TOL_1312 YajC K03210 yajC; preprotein translocase subunit YajC D TOL_0810 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TOL_0136 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D TOL_2976 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D TOL_0974 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tol02030] D TOL_1306 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0109 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D TOL_0306 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0359 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0763 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1550 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1557 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1785 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0708 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2331 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2948 probable chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D TOL_2365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2508 probable methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2467 hypothetical protein K03776 aer; aerotaxis receptor D TOL_3163 periplasmic sugar binding protein K10439 rbsB; ribose transport system substrate-binding protein D TOL_2486 probable two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2510 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2481 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2482 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2509 Purine-binding chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2488 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2511 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2100 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2101 hypothetical protein K03410 cheC; chemotaxis protein CheC D TOL_2487 Chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D TOL_1350 chemotaxis protein CheC K03409 cheX; chemotaxis protein CheX D TOL_2485 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_2505 two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_1486 putative CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_2596 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_2506 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D TOL_2595 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TOL_2507 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TOL_0623 hypothetical protein K02410 fliG; flagellar motor switch protein FliG D TOL_2516 flagellar motor protein K02410 fliG; flagellar motor switch protein FliG D TOL_2499 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D TOL_2498 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D TOL_0624 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA D TOL_3035 Flagellar motor component K02556 motA; chemotaxis protein MotA D TOL_3219 flagellar motor protein K02556 motA; chemotaxis protein MotA D TOL_0625 chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D TOL_3034 motility protein, MotA family protein K02557 motB; chemotaxis protein MotB D TOL_3220 flagellar motor protein K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:tol02040] D TOL_2518 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D TOL_2517 flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D TOL_0623 hypothetical protein K02410 fliG; flagellar motor switch protein FliG D TOL_2516 flagellar motor protein K02410 fliG; flagellar motor switch protein FliG D TOL_2515 hypothetical protein K02411 fliH; flagellar assembly protein FliH D TOL_2514 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D TOL_2513 hypothetical protein K02413 fliJ; flagellar protein FliJ D TOL_2501 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D TOL_3638 flagellar protein K02415 fliL; flagellar protein FliL D TOL_2500 flagellar protein K02415 fliL; flagellar protein FliL D TOL_2499 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D TOL_2498 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D TOL_2497 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D TOL_2496 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D TOL_2495 flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ D TOL_2494 flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR D TOL_2492 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D TOL_2493 Flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB D TOL_2597 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D TOL_2594 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D TOL_2593 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D TOL_2592 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D TOL_2591 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D TOL_2589 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D TOL_2588 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D TOL_2587 Flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D TOL_2583 Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D TOL_2582 Muramidase (flagellum-specific) K02395 flgJ; peptidoglycan hydrolase FlgJ D TOL_2581 flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D TOL_2580 flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL D TOL_0589 hypothetical protein K09860 flgP; outer membrane protein FlgP D TOL_2394 Mot-Exb superfamily outer membrane transport energizer K21218 motY; sodium-type flagellar protein MotY D TOL_2530 hypothetical protein K02406 fliC; flagellin D TOL_2522 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D TOL_0624 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA D TOL_3035 Flagellar motor component K02556 motA; chemotaxis protein MotA D TOL_3219 flagellar motor protein K02556 motA; chemotaxis protein MotA D TOL_0625 chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D TOL_3034 motility protein, MotA family protein K02557 motB; chemotaxis protein MotB D TOL_3220 flagellar motor protein K02557 motB; chemotaxis protein MotB D TOL_2598 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM D TOL_2599 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D TOL_0579 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D TOL_2521 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D TOL_3100 DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor D TOL_2519 Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D TOL_2489 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D TOL_3076 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:tol04980] D TOL_2832 ATP--cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D TOL_1830 metH gene product K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tol01501] D TOL_2826 major facilitator superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D TOL_1242 Major facilitator superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D TOL_2083 Beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D TOL_0824 hypothetical protein K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D TOL_1028 LOW QUALITY PROTEIN: secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1357 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_2201 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1027 acrB gene product K18138 acrB; multidrug efflux pump D TOL_1356 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D TOL_0033 TolC subfamily outer membrane protein K12340 tolC; outer membrane protein D TOL_3243 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TOL_2911 Cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D TOL_0796 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:tol01502] D TOL_0804 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TOL_3309 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D TOL_0798 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D TOL_0799 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D TOL_0802 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tol01503] D TOL_3624 Signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D TOL_3625 DNA-binding response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D TOL_3360 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D TOL_3028 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D TOL_0918 alginate biosynthesis negative regulator, serine protease AlgY K04771 degP; serine protease Do [EC:3.4.21.107] D TOL_0076 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D TOL_2308 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D TOL_1028 LOW QUALITY PROTEIN: secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1357 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_2201 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1027 acrB gene product K18138 acrB; multidrug efflux pump D TOL_0033 TolC subfamily outer membrane protein K12340 tolC; outer membrane protein D TOL_2434 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tol01000] C 01001 Protein kinases [BR:tol01001] D TOL_2109 putative RIO1/ZK632.3/MJ0444 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D TOL_0180 HipA toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_0184 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_2044 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_3720 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_2532 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D TOL_0150 phoR1; sensor signal transduction histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D TOL_0158 phoR2; sensor signal transduction histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D TOL_2469 integral membrane sensor signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D TOL_3624 Signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D TOL_0556 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_1709 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_0788 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D TOL_1929 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D TOL_3359 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D TOL_0926 signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D TOL_3677 alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D TOL_2956 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D TOL_2867 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D TOL_1030 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_2426 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_3215 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_2650 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_2486 probable two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2510 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_0276 sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D TOL_2520 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D TOL_0333 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D TOL_0666 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_1581 sensory box histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_2357 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_3630 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_1988 signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D TOL_1413 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS D TOL_2104 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS D TOL_2857 hypothetical protein K20972 retS; two-component system, sensor histidine kinase RetS C 01009 Protein phosphatases and associated proteins [BR:tol01009] D TOL_0288 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D TOL_2091 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D TOL_0391 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D TOL_3048 Phosphoserine phosphatase SerB:HAD-superfamily hydrolase, subfamily IB (PSPase-like) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:tol01002] D TOL_2878 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D TOL_0689 Leader peptidase (Prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D TOL_1266 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D TOL_1563 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D TOL_1542 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D TOL_3234 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D TOL_0072 glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D TOL_3600 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D TOL_1140 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D TOL_0101 prlC gene product K01414 prlC; oligopeptidase A [EC:3.4.24.70] D TOL_1116 hypothetical protein K09607 ina; immune inhibitor A [EC:3.4.24.-] D TOL_0474 peptidase M15A K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D TOL_1037 hypothetical protein K01408 IDE; insulysin [EC:3.4.24.56] D TOL_1662 Peptidase M16-like K06972 PITRM1; presequence protease [EC:3.4.24.-] D TOL_1271 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D TOL_3172 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D TOL_1347 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D TOL_2447 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D TOL_1522 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D TOL_3610 pepP gene product K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D TOL_2724 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D TOL_0093 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D TOL_2133 M48 family peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D TOL_2439 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D TOL_2048 phenylalanyl-tRNA synthetase subunit alpha K09933 mtfA; MtfA peptidase D TOL_0918 alginate biosynthesis negative regulator, serine protease AlgY K04771 degP; serine protease Do [EC:3.4.21.107] D TOL_3085 peptidase S1 and S6, chymotrypsin/Hap K04691 hhoB; serine protease DegS [EC:3.4.21.-] D TOL_3513 serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D TOL_0049 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D TOL_2709 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D TOL_0061 hypothetical protein K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D TOL_2896 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D TOL_1853 clpP gene product K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D TOL_1851 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D TOL_2086 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D TOL_1113 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D TOL_0442 hypothetical protein K22369 EPHX4; epoxide hydrolase 4 [EC:3.3.-.-] D TOL_2152 periplasmic tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D TOL_2980 Periplasmic protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D TOL_1643 putative peptidase K04773 sppA; protease IV [EC:3.4.21.-] D TOL_1837 SohB protein, peptidase U7 family K04774 sohB; serine protease SohB [EC:3.4.21.-] D TOL_1137 hypothetical protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D TOL_3203 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D TOL_0218 Gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D TOL_1818 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-] D TOL_3475 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D TOL_3022 protease subunit HflC K04087 hflC; modulator of FtsH protease HflC D TOL_3023 HflK protein K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:tol01003] D TOL_3474 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D TOL_0304 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D TOL_3243 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TOL_2108 hypothetical protein K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tol01005] D TOL_2434 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D TOL_2433 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D TOL_0808 lpxC; UDP-3-O-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D TOL_2436 lpxD; UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D TOL_0959 Phosphoesterase, PA-phosphatase related protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D TOL_1873 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D TOL_1877 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D TOL_0131 hypothetical protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D TOL_0037 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D TOL_0034 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D TOL_2883 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D TOL_1902 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D TOL_1904 HAD-superfamily hydrolase subfamily IIIA:Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D TOL_3096 sugar isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D TOL_2563 carbohydrate isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D TOL_1482 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D TOL_0284 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D TOL_0282 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D TOL_0840 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D TOL_2193 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D TOL_0018 histidinol phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D TOL_0035 bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D TOL_0036 rfaD gene product K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D TOL_2290 hypothetical protein K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D TOL_2267 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tol01011] D TOL_3089 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D TOL_1874 UDP-N-acetylenolpyruvoylglucosamine reductase,FAD-binding K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D TOL_0803 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D TOL_0800 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D TOL_0797 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D TOL_0804 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D TOL_3309 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D TOL_2031 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D TOL_0799 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D TOL_0802 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D TOL_0937 undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D TOL_2935 PA-phosphatase-like phosphoesterase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D TOL_2881 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D TOL_3243 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D TOL_0304 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D TOL_3474 penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D TOL_2911 Cell division protein FtsI/penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D TOL_0796 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D TOL_2896 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D TOL_3600 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D TOL_0474 peptidase M15A K08640 E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14] D TOL_2833 hypothetical protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D TOL_2913 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D TOL_1016 membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D TOL_1845 lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D TOL_2644 predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D TOL_1651 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D TOL_2914 Rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D TOL_3028 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D TOL_0695 N-acetyl-anhydromuramyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:tol01004] D TOL_1647 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D TOL_1990 Beta-ketoacyl synthase, C-terminal domain protein K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D TOL_1476 3-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D TOL_1239 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_1648 fabG gene product K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_0712 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D TOL_2435 (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D TOL_1847 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D TOL_3357 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D TOL_0248 Arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D TOL_1257 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D TOL_0141 hypothetical protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D TOL_1574 hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-] D TOL_2070 Stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D TOL_2810 Fatty-acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D TOL_2422 putative fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D TOL_2835 hypothetical protein K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D TOL_2040 fatty acid desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3] D TOL_1092 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D TOL_1519 PrpE protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D TOL_1609 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2208 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2038 acyl-CoA synthase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_0939 Glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D TOL_1646 hypothetical protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D TOL_0017 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D TOL_3555 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:tol01008] D TOL_2603 hypothetical protein K05555 actIV; cyclase [EC:4.-.-.-] D TOL_2765 FMN-dependent alpha-hydroxy acid dehydrogenase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:tol01006] D TOL_3217 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D TOL_2888 Octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D TOL_2442 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D TOL_3026 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D TOL_0230 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D TOL_0160 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:tol01007] D TOL_1907 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TOL_1871 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D TOL_2997 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D TOL_0318 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TOL_2300 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TOL_2301 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TOL_1870 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TOL_0336 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TOL_0971 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TOL_2879 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TOL_1343 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TOL_0681 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TOL_2525 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D TOL_1972 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TOL_0952 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TOL_0020 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D TOL_0019 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D TOL_1787 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TOL_1434 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TOL_2189 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TOL_0446 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TOL_2185 pheS gene product K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TOL_2184 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TOL_2257 aspartate aminotransferase A K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D TOL_1951 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D TOL_2406 aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D TOL_3262 hypothetical protein K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D TOL_3086 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_2287 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D TOL_0780 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D TOL_2463 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D TOL_1523 Diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D TOL_3541 diaminobutyrate--2-oxoglutarate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D TOL_0781 adenosylmethionine--8-amino-7-oxononanoate transaminase (DAPA aminotransferase) K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D TOL_0308 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D TOL_0297 Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D TOL_2289 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:tol00199] C 00194 Photosynthesis proteins [BR:tol00194] D TOL_3694 hypothetical protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D TOL_3695 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D TOL_1681 H+-transporting two-sector ATPase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D TOL_3696 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D TOL_3697 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D TOL_3698 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D TOL_3699 F0F1-type ATP synthase, subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D TOL_3700 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D TOL_3701 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tol03000] D TOL_2665 transcriptional regulator, AraC family K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D TOL_3484 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D TOL_3039 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D TOL_3259 Transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D TOL_2468 transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D TOL_1317 hypothetical protein K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D TOL_3717 Possible transcriptional activator of LysR family protein K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D TOL_0171 oxidative stress regulatory protein OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D TOL_1618 cysB gene product K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D TOL_3177 HTH-type transcriptional activator CmpR K21711 pycR; LysR family transcriptional regulator, putative pyruvate carboxylase regulator D TOL_2459 regulatory protein, LysR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D TOL_1913 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D TOL_0814 hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D TOL_0824 hypothetical protein K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D TOL_0206 nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator D TOL_3300 transcriptional regulator, TetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator D TOL_2735 hypothetical OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein D TOL_1382 transcriptional regulator, TetR family protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D TOL_1390 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D TOL_3724 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D TOL_2669 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D TOL_2651 Transcriptional regulator2C AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D TOL_3054 regulatory protein CsgD K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D TOL_0685 hypothetical protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D TOL_1424 hypothetical protein K21748 alkS; LuxR family transcriptional regulator, alkane degradation pathway regulator D TOL_1948 transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D TOL_0540 resistance operon regulatory protein K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D TOL_1721 MerR family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D TOL_0659 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D TOL_2808 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D TOL_2742 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D TOL_3377 zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D TOL_0653 cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D TOL_2008 transcriptional regulator Anr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D TOL_0946 Transcriptional Regulator, BadM/Rrf2 family protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D TOL_2055 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D TOL_2839 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D TOL_1745 ArsR family transcriptional regulator K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D TOL_2026 ArsR family transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D TOL_3566 transcriptional regulator, RpiR family protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D TOL_3473 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D TOL_2854 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D TOL_0531 helix-turn-helix domain protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator D TOL_0197 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D TOL_2521 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D TOL_1283 hypothetical protein K07726 K07726; putative transcriptional regulator D TOL_1341 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator D TOL_0187 transcriptional regulator K07727 K07727; putative transcriptional regulator D TOL_2410 putative transcriptional regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D TOL_2050 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D TOL_2020 stress-induced morphogen K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D TOL_3704 chromosome partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TOL_2729 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D TOL_1917 regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D TOL_0266 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D TOL_0185 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein D TOL_0268 hypothetical protein K07735 algH; putative transcriptional regulator D TOL_0478 C4-type zinc finger DksA/TraR family protein K06204 dksA; RNA polymerase-binding transcription factor D TOL_2996 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D TOL_3407 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D TOL_3142 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D TOL_0793 hypothetical protein K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tol03021] D TOL_3425 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D TOL_3457 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D TOL_3456 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D TOL_0176 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D TOL_0579 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D TOL_3057 nonessential primary sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D TOL_0914 algU gene product K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D TOL_3406 putative RNA polymerase sigma factor (ECF family) protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D TOL_0140 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D TOL_3100 DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor D TOL_2489 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D TOL_1753 ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D TOL_2717 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D TOL_3147 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D TOL_3462 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D TOL_0404 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D TOL_0405 starvation protein B K03600 sspB; stringent starvation protein B D TOL_1827 two-component response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D TOL_0915 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA D TOL_0916 hypothetical protein K03598 rseB; sigma-E factor negative regulatory protein RseB D TOL_0917 algM gene product K03803 rseC; sigma-E factor negative regulatory protein RseC D TOL_0478 C4-type zinc finger DksA/TraR family protein K06204 dksA; RNA polymerase-binding transcription factor D TOL_2996 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D TOL_3407 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D TOL_2731 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D TOL_2012 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D TOL_3563 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tol03019] D TOL_1640 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D TOL_3109 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D TOL_0921 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D TOL_0362 predicted metal-dependent RNase K12574 rnj; ribonuclease J [EC:3.1.-.-] D TOL_3200 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D TOL_3032 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D TOL_1567 ATP-dependent RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D TOL_0736 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D TOL_0255 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D TOL_2047 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D TOL_2681 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TOL_0338 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TOL_3076 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TOL_2711 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D TOL_3563 transcription termination factor Rho K03628 rho; transcription termination factor Rho D TOL_2739 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TOL_0725 RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60 chaperonin 60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TOL_3025 uncharacterized host factor I protein K03666 hfq; host factor-I protein D TOL_3560 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D TOL_3001 tRNA nucleotidyltransferase/poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D TOL_3603 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D TOL_0448 carbon storage regulator K03563 csrA; carbon storage regulator D TOL_1632 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D TOL_3103 hypothetical protein K06958 rapZ; RNase adapter protein RapZ D TOL_1610 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D TOL_1228 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:tol03011] D TOL_2284 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D TOL_2446 rpsB; 30S ribosomal subunit protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D TOL_3444 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D TOL_3426 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D TOL_3433 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D TOL_3345 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D TOL_3454 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D TOL_3436 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D TOL_0400 rpsI gene product K02996 RP-S9; small subunit ribosomal protein S9 D TOL_3451 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D TOL_3427 rpsK gene product K02948 RP-S11; small subunit ribosomal protein S11 D TOL_3455 30S ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12 D TOL_3428 rpsM gene product K02952 RP-S13; small subunit ribosomal protein S13 D TOL_3437 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D TOL_2713 rpsO; 30S ribosomal subunit protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D TOL_2628 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D TOL_3441 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D TOL_3344 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D TOL_3446 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D TOL_2882 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D TOL_0582 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D TOL_3460 rplA gene product K02863 RP-L1; large subunit ribosomal protein L1 D TOL_3447 rplB gene product K02886 RP-L2; large subunit ribosomal protein L2 D TOL_3450 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D TOL_3449 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D TOL_3438 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D TOL_3435 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D TOL_3342 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D TOL_3459 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D TOL_3461 rplK gene product K02867 RP-L11; large subunit ribosomal protein L11 D TOL_3458 50S ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12 D TOL_0399 rplM gene product K02871 RP-L13; large subunit ribosomal protein L13 D TOL_3440 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D TOL_3431 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D TOL_3443 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D TOL_3424 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D TOL_3434 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D TOL_2625 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D TOL_2186 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D TOL_2887 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D TOL_3445 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D TOL_3448 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D TOL_3439 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D TOL_2886 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D TOL_0213 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D TOL_3442 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D TOL_3432 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D TOL_3209 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D TOL_1645 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D TOL_0214 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D TOL_3731 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D TOL_2187 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D TOL_3429 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D TOL_0828 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25 D TOL_2453 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_3253 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_0323 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_3250 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_2455 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_3255 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_3252 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_0319 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_0322 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_3254 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_3251 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_2454 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tol03009] D TOL_0921 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D TOL_2109 putative RIO1/ZK632.3/MJ0444 family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D TOL_3032 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D TOL_0922 GTP-binding protein Era K03595 era; GTPase D TOL_2885 GTP-binding protein, GTP1/Obg family protein K03979 obgE; GTPase [EC:3.6.5.-] D TOL_0478 C4-type zinc finger DksA/TraR family protein K06204 dksA; RNA polymerase-binding transcription factor D TOL_2996 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D TOL_3407 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D TOL_2717 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D TOL_3147 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D TOL_3462 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D TOL_1381 pseudouridine synthase Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D TOL_1419 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D TOL_0598 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D TOL_0885 tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D TOL_0122 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D TOL_0658 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D TOL_0134 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D TOL_3222 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D TOL_3706 GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D TOL_0794 S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D TOL_0843 uroporphyrin-III C/tetrapyrrole methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D TOL_0938 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D TOL_1346 S-adenosylmethionine-dependent methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D TOL_3199 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D TOL_2725 23S rRNA methylase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D TOL_1234 hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D TOL_1815 hypothetical protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D TOL_2910 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D TOL_3606 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D TOL_1315 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D TOL_1198 23S rRNA m(2)G2445 methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D TOL_0949 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D TOL_0928 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D TOL_1819 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D TOL_2381 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D TOL_2297 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D TOL_1641 ribosomal large subunit pseudouridine synthase C (pseudouridylate synthase) (uracil hydrolyase) K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D TOL_3164 hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D TOL_2863 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D TOL_1799 Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D TOL_2402 23S rRNA pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D TOL_0330 rimI gene product K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D TOL_0742 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D TOL_2462 30S ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D TOL_3275 hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D TOL_2627 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D TOL_1985 MiaB-like tRNA modifying enzyme YliG K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D TOL_2851 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D TOL_2318 HemK family modification methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D TOL_1899 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D TOL_1640 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] D TOL_3109 Ribonucleases G and E K08301 rng; ribonuclease G [EC:3.1.26.-] D TOL_0267 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D TOL_1255 DEAD/DEAH box helicase-like protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D TOL_2681 DEAD/DEAH box helicase-like protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D TOL_2450 probable ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D TOL_3033 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D TOL_0955 predicted GTPase K03977 engA; GTPase D TOL_2023 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A D TOL_3024 probable GTP-binding protein K03665 hflX; GTPase D TOL_0116 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D TOL_0175 spoT gene product K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D TOL_2715 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D TOL_2718 ribosome maturation protein RimP K09748 rimP; ribosome maturation factor RimP D TOL_2909 uncharacterized plant Iojap protein K09710 ybeB; ribosome-associated protein D TOL_0817 uncharacterized UPF0054 family protein K07042 ybeY; probable rRNA maturation factor D TOL_2726 hypothetical protein K07574 yhbY; RNA-binding protein D TOL_3106 hypothetical protein K09889 yjgA; ribosome-associated protein D TOL_1197 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor D TOL_3101 hpf; ribosome hibernation promoting factor HPF; stabilizes 70S dimers (100S) K05808 hpf; ribosome hibernation promoting factor D TOL_0849 raiA; 30S ribosomal subunit interface binding protein K05808 hpf; ribosome hibernation promoting factor D TOL_0826 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D TOL_1644 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:tol03016] D TOL_0586 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D TOL_1907 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TOL_1434 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D TOL_2879 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D TOL_0681 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TOL_0971 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D TOL_1871 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D TOL_0336 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TOL_2525 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D TOL_1972 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TOL_0446 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D TOL_2189 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D TOL_1787 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D TOL_1870 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D TOL_1343 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D TOL_0952 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D TOL_2185 pheS gene product K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D TOL_2184 phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D TOL_0318 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TOL_2300 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TOL_2301 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D TOL_2954 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D TOL_0234 probable HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D TOL_3248 protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D TOL_3653 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D TOL_0890 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D TOL_1533 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D TOL_2714 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D TOL_3062 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D TOL_0947 cysteine desulfurase used in synthesis of Fe-S cluster (tRNA4-thiouridine sulfur transferase) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TOL_0116 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D TOL_3026 tRNA isopentenyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D TOL_3728 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D TOL_3721 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D TOL_2221 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D TOL_3730 rnpA; protein component of RNase P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D TOL_0854 rnpB; RNA component of bacterial RNase P class A K01978 rnpB; M1 RNA D TOL_2396 rnt gene product K03683 rnt; ribonuclease T [EC:3.1.13.-] D TOL_0202 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D TOL_1009 Exoribonuclease R K01147 rnb; exoribonuclease II [EC:3.1.13.1] D TOL_1588 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D TOL_3134 putative ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA D TOL_0020 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D TOL_0019 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D TOL_2997 glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D TOL_3152 YbaK family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D TOL_2645 cytidine/deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D TOL_1803 Dihydrouridine synthase TIM-barrel protein yjbN K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D TOL_2853 Dihydrouridine synthase TIM-barrel protein nifR3 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D TOL_2692 NifR3/Smm1 family protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D TOL_0819 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D TOL_2694 putative SAM-dependent methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D TOL_2693 cmoB; SAM-dependent tRNA mo(5)U34 methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D TOL_0515 smtA gene product K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D TOL_1256 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D TOL_2626 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D TOL_0155 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D TOL_0944 RNA methyltransferase, TrmH family, group 1 K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D TOL_1560 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D TOL_2965 putative tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D TOL_3160 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D TOL_2623 RNA pseudouridine synthase family protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D TOL_1819 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D TOL_2381 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D TOL_1801 tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D TOL_2010 tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D TOL_1243 SirA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D TOL_2132 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D TOL_1782 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D TOL_1781 hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D TOL_1780 tusD; sulfurtransferase for 2-thiolation step of mnm(5)-s(2)U34-tRNA synthesis K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D TOL_1783 protein DsrC K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D TOL_0910 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D TOL_1575 tRNA--hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D TOL_2310 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D TOL_1310 S-adenosylmethionine K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D TOL_2456 putative regulator protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D TOL_2457 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D TOL_1938 NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D TOL_3031 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D TOL_2220 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D TOL_1311 Queuine tRNA-ribosyltransferase(tRNA-guanine transglycosylase)(Guanine insertion enzyme) K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D TOL_1675 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D TOL_0744 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D TOL_0936 putative peptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D TOL_0583 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D TOL_3029 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D TOL_2344 ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D TOL_3200 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D TOL_2711 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:tol03012] D TOL_2649 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D TOL_2716 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D TOL_2188 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D TOL_3650 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D TOL_2445 elongation factor Ts K02357 tsf; elongation factor Ts D TOL_3452 translation elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3465 elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3467 elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3453 translation elongation factor G K02355 fusA; elongation factor G D TOL_3466 elongation factor G K02355 fusA; elongation factor G D TOL_0835 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D TOL_2443 ribosome recycling factor K02838 frr; ribosome recycling factor D TOL_0836 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D TOL_0827 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D TOL_1794 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D TOL_0406 elongation factor P-like protein K02356 efp; elongation factor P D TOL_0962 elongation factor P K02356 efp; elongation factor P D TOL_3044 elongation factor P K02356 efp; elongation factor P D TOL_3043 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D TOL_3045 hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D TOL_1566 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D TOL_2526 prfB gene product K02836 prfB; peptide chain release factor 2 D TOL_0397 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D TOL_0605 peptidyl-tRNA hydrolase domain protein K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:tol03110] D TOL_1795 ATP-binding protease component ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D TOL_2148 clpB; protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D TOL_1852 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D TOL_3202 ATP-dependent protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D TOL_2091 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D TOL_2739 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TOL_2335 putative chaperone K04046 yegD; hypothetical chaperone protein D TOL_0725 RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60 chaperonin 60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TOL_2738 dnaJ protein K03686 dnaJ; molecular chaperone DnaJ D TOL_0604 Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein D TOL_3634 Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33 D TOL_2740 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D TOL_3633 hypothetical protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D TOL_0724 RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10 cochaperonin 10 K04078 groES; chaperonin GroES D TOL_0918 alginate biosynthesis negative regulator, serine protease AlgY K04771 degP; serine protease Do [EC:3.4.21.107] D TOL_2724 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D TOL_3701 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D TOL_2976 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D TOL_3553 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D TOL_2847 hypothetical protein K09796 pccA; periplasmic copper chaperone A D TOL_3513 serine protease K01342 aprE; subtilisin [EC:3.4.21.62] D TOL_0049 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-] D TOL_2709 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-] D TOL_0061 hypothetical protein K13277 epr; minor extracellular protease Epr [EC:3.4.21.-] D TOL_2308 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D TOL_1872 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D TOL_1848 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D TOL_2121 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D TOL_2877 Peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D TOL_2656 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D TOL_3204 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D TOL_2942 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D TOL_2688 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D TOL_0600 Parvulin-like peptidyl-prolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D TOL_3562 thioredoxin K03671 TXN; thioredoxin D TOL_2890 hypothetical protein K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D TOL_1548 hypothetical protein K05838 ybbN; putative thioredoxin D TOL_2836 hypothetical protein K07390 grxD; monothiol glutaredoxin D TOL_0076 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D TOL_3640 Disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D TOL_2624 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D TOL_2889 Thiol:disulfide interchange protein dsbD 1 precursor (Protein-disulfide reductase 1) (Disulfide reductase 1) K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D TOL_1078 ccmG; periplasmic thioredoxin of cytochrome c-type biogenesis, subunit CcmG K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:tol04131] D TOL_0948 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D TOL_2946 PF27 family transporter K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D TOL_2077 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D TOL_2091 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:tol03051] D TOL_2091 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:tol03032] D TOL_1843 RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D TOL_0164 hupA gene product K05787 hupA; DNA-binding protein HU-alpha D TOL_1850 nucleoid protein HU subunit beta K03530 hupB; DNA-binding protein HU-beta D TOL_2183 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha D TOL_2283 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D TOL_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D TOL_3341 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D TOL_0580 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D TOL_3056 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TOL_0743 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TOL_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TOL_1345 holC gene product K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D TOL_0679 holA gene product K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TOL_1653 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D TOL_1842 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1098 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1585 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TOL_2432 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D TOL_0083 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TOL_1179 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TOL_2258 DNA replication initiation factor K10763 hda; DnaA-homolog protein D TOL_2291 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D TOL_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D TOL_0026 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D TOL_0028 parD; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D TOL_1130 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D TOL_0295 topC; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:tol03036] D TOL_0921 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D TOL_0164 hupA gene product K05787 hupA; DNA-binding protein HU-alpha D TOL_1850 nucleoid protein HU subunit beta K03530 hupB; DNA-binding protein HU-beta D TOL_2183 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha D TOL_2283 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D TOL_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein D TOL_2854 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D TOL_3025 uncharacterized host factor I protein K03666 hfq; host factor-I protein D TOL_2651 Transcriptional regulator2C AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D TOL_2339 hypothetical protein K06899 ndpA; nucleoid-associated protein D TOL_1177 hypothetical protein K03529 smc; chromosome segregation protein D TOL_2299 segregation and condensation protein K05896 scpA; segregation and condensation protein A D TOL_2298 hypothetical protein K06024 scpB; segregation and condensation protein B D TOL_0806 cell division protein FtsA K03590 ftsA; cell division protein FtsA D TOL_3065 hypothetical protein K05589 ftsB; cell division protein FtsB D TOL_0137 cell division ABC transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D TOL_0796 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D TOL_1791 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D TOL_0795 hypothetical protein K03586 ftsL; cell division protein FtsL D TOL_0805 hypothetical protein K03589 ftsQ; cell division protein FtsQ D TOL_0801 ftsW; lipid II flippase K03588 ftsW; cell division protein FtsW D TOL_0138 Cell division protein K09811 ftsX; cell division transport system permease protein D TOL_0807 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TOL_1178 hypothetical protein K03528 zipA; cell division protein ZipA D TOL_3613 hypothetical protein K09888 zapA; cell division protein ZapA D TOL_3612 hypothetical protein K09892 zapB; cell division protein ZapB D TOL_3535 hypothetical protein K09892 zapB; cell division protein ZapB D TOL_1296 hypothetical protein K06916 zapE; cell division protein ZapE D TOL_3028 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D TOL_1028 LOW QUALITY PROTEIN: secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1357 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_2201 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_2938 septum formation inhibitor K03610 minC; septum site-determining protein MinC D TOL_2939 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D TOL_2940 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D TOL_2087 hypothetical protein K13053 sulA; cell division inhibitor SulA D TOL_0206 nucleoid occlusion protein K05501 slmA; TetR/AcrR family transcriptional regulator D TOL_3113 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D TOL_3112 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D TOL_3111 hypothetical protein K03571 mreD; rod shape-determining protein MreD D TOL_2912 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D TOL_3705 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D TOL_3644 putative partition-related protein K03496 parA; chromosome partitioning protein D TOL_2484 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D TOL_3704 chromosome partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TOL_0026 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D TOL_0028 parD; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D TOL_3721 glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D TOL_3706 GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D TOL_1411 antiporter inner membrane K03593 mrp; ATP-binding protein involved in chromosome partitioning D TOL_0052 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D TOL_0079 hypothetical protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:tol03400] D TOL_2809 FAD-binding deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D TOL_2524 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D TOL_0351 mutY gene product K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D TOL_2363 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D TOL_0226 endonuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1] D TOL_0812 mutT gene product K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D TOL_0209 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D TOL_3484 hypothetical protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D TOL_2776 hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D TOL_1436 DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D TOL_0215 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D TOL_0203 Exonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D TOL_1670 xthA gene product K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D TOL_1025 recJ gene product K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D TOL_1179 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TOL_0083 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D TOL_3053 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D TOL_2256 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D TOL_1775 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D TOL_2657 Superfamily I DNA and RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TOL_3565 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D TOL_3457 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D TOL_3456 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D TOL_3425 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D TOL_0176 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D TOL_2078 hypothetical protein K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D TOL_3129 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D TOL_3027 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D TOL_1247 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D TOL_1261 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D TOL_3218 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D TOL_0743 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D TOL_0002 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D TOL_1345 holC gene product K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D TOL_0679 holA gene product K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D TOL_1653 hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D TOL_1842 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1098 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D TOL_1585 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D TOL_3056 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TOL_1472 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D TOL_1471 hypothetical protein K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D TOL_1473 Exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D TOL_0438 recA protein K03553 recA; recombination protein RecA D TOL_2145 Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA D TOL_2144 ruvB gene product K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D TOL_2146 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D TOL_3210 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D TOL_1245 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D TOL_3224 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D TOL_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D TOL_0170 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TOL_0980 hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D TOL_0923 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D TOL_1587 hypothetical protein K06187 recR; recombination protein RecR D TOL_2741 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D TOL_2232 cas1 gene product K15342 cas1; CRISP-associated protein Cas1 D TOL_2291 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D TOL_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D TOL_1130 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D TOL_0164 hupA gene product K05787 hupA; DNA-binding protein HU-alpha D TOL_1850 nucleoid protein HU subunit beta K03530 hupB; DNA-binding protein HU-beta D TOL_2854 global DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D TOL_2183 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha D TOL_2283 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D TOL_0338 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D TOL_2936 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D TOL_2086 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D TOL_2986 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D TOL_2823 hypothetical protein K14161 imuB; protein ImuB D TOL_2824 DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D TOL_0439 regulatory protein RecX K03565 recX; regulatory protein D TOL_0055 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D TOL_1887 ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D TOL_2471 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D TOL_2472 ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:tol03029] D TOL_0402 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D TOL_2716 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D TOL_2188 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D TOL_2445 elongation factor Ts K02357 tsf; elongation factor Ts D TOL_3452 translation elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3465 elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3467 elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3453 translation elongation factor G K02355 fusA; elongation factor G D TOL_3466 elongation factor G K02355 fusA; elongation factor G D TOL_0922 GTP-binding protein Era K03595 era; GTPase D TOL_0318 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D TOL_0681 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D TOL_1972 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D TOL_0336 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D TOL_3115 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D TOL_3116 aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D TOL_3114 aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D TOL_3056 single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein D TOL_2438 bamA; outer membrane beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D TOL_2739 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TOL_2740 co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE D TOL_0725 RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60 chaperonin 60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TOL_0724 RecName: Full=10 kDa chaperonin; AltName: Full=GroES protein; AltName: Full=Protein Cpn10 cochaperonin 10 K04078 groES; chaperonin GroES D TOL_2738 dnaJ protein K03686 dnaJ; molecular chaperone DnaJ D TOL_0947 cysteine desulfurase used in synthesis of Fe-S cluster (tRNA4-thiouridine sulfur transferase) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D TOL_2836 hypothetical protein K07390 grxD; monothiol glutaredoxin D TOL_1411 antiporter inner membrane K03593 mrp; ATP-binding protein involved in chromosome partitioning D TOL_3729 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D TOL_3380 ggdef K07152 SCO1; protein SCO1 D TOL_2091 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tol02000] D TOL_1878 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D TOL_0881 putative ABC-type multidrug transport system,ATPase and permease component K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump D TOL_1572 ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D TOL_1154 probable ATP-binding component of ABC transporter K15738 uup; ABC transport system ATP-binding/permease protein D TOL_2781 molybdenum ABC transporter periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D TOL_2780 molybdate ABC transporter inner membrane subunit K02018 modB; molybdate transport system permease protein D TOL_2779 molybdate ABC transporter, ATPase subunit K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D TOL_3247 ABC molybdenum transporter, ATP-binding subunit modF K05776 modF; molybdate transport system ATP-binding protein D TOL_1456 Tat pathway signal sequence domain protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D TOL_1455 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D TOL_1454 nitrate transporter system, ATPase component K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D TOL_0302 transcription factor jumonji, jmjC K11073 potF; putrescine transport system substrate-binding protein D TOL_0299 Binding-protein-dependent transport systems inner membrane component K11074 potI; putrescine transport system permease protein D TOL_0300 putrescine transport protein K11075 potH; putrescine transport system permease protein D TOL_0301 putative putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D TOL_2943 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D TOL_2415 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D TOL_3688 nitrate/sulfonate/bicarbonate ABC transporter K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D TOL_2414 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D TOL_2413 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D TOL_3163 periplasmic sugar binding protein K10439 rbsB; ribose transport system substrate-binding protein D TOL_2421 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins D TOL_3287 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein D TOL_3288 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein D TOL_3286 ABC transporter ATPase K23537 nupA; general nucleoside transport system ATP-binding protein D TOL_3092 toluene tolerance ABC transporter periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D TOL_3093 organic solvents resistance ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D TOL_3094 organic solvents resistance ABC transporter ATPase K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D TOL_0353 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein D TOL_3091 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein D TOL_0144 ABC transporter phosphate binding periplasmic component K02040 pstS; phosphate transport system substrate-binding protein D TOL_2018 OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein D TOL_0145 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D TOL_0146 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D TOL_0147 phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D TOL_2219 hypothetical ABC-type phosphate/phosphonate transport system, periplasmic component K02044 phnD; phosphonate transport system substrate-binding protein D TOL_2217 hypothetical protein K02042 phnE; phosphonate transport system permease protein D TOL_2218 ABC transporter-like protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D TOL_2672 ABC transporter periplasmic substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D TOL_3576 hypothetical protein K11959 urtA; urea transport system substrate-binding protein D TOL_2673 branched-chain amino acid ABC transporter permease K11960 urtB; urea transport system permease protein D TOL_3575 Branched-chain amino acid ABC-type transport system, permease components K11960 urtB; urea transport system permease protein D TOL_2674 urea ABC transporter permease UrtC K11961 urtC; urea transport system permease protein D TOL_3574 ABC-type branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein D TOL_2675 urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D TOL_3573 uncharacterized ABC-type transport system, ATPase component K11962 urtD; urea transport system ATP-binding protein D TOL_2676 urea ABC transporter ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein D TOL_3572 ABC-type branched-chain amino acid transport system, ATPase component K11963 urtE; urea transport system ATP-binding protein D TOL_0726 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D TOL_3622 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D TOL_3550 ABC transporter periplasmic-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D TOL_0883 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D TOL_1405 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D TOL_1406 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D TOL_1407 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D TOL_1408 ABC transporter related protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D TOL_1846 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein D TOL_2990 ABC-type Fe3+-siderophore transport system,permease component K25133 hmuU; heme transport system permease protein D TOL_2989 hemin importer ATP-binding subunit K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D TOL_0704 substrate-binding periplasmic (PBP) ABC transporter protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D TOL_3376 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D TOL_3379 ABC-3 protein K09816 znuB; zinc transport system permease protein D TOL_3378 high-affinity zinc ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D TOL_2280 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D TOL_2277 Teichoic-acid-transporting ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D TOL_1272 permease K07091 lptF; lipopolysaccharide export system permease protein D TOL_1273 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D TOL_3099 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D TOL_1884 lolC; lipoprotein-releasing system, ABC transporter permease K09808 lolC_E; lipoprotein-releasing system permease protein D TOL_1883 lolD; lipoprotein releasing system, ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D TOL_1075 ccmD; heme exporter subunit CcmD K02196 ccmD; heme exporter protein D D TOL_1074 ccmC; heme exporter subunit CcmC K02195 ccmC; heme exporter protein C D TOL_1073 ccmB; heme exporter subunit CcmB K02194 ccmB; heme exporter protein B D TOL_1072 ccmA; heme exporter subunit CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D TOL_0138 Cell division protein K09811 ftsX; cell division transport system permease protein D TOL_0137 cell division ABC transporter, ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D TOL_1939 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D TOL_1940 ABC transporter-like protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TOL_2425 X-Pro dipeptidyl-peptidase (S15 family) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D TOL_0250 permease K02004 ABC.CD.P; putative ABC transport system permease protein D TOL_2167 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D TOL_2168 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D TOL_0249 ABC-type transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TOL_2166 peptide ABC transporter ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D TOL_2348 Cysteine desulfurase activator ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein D TOL_1565 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump D TOL_1831 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D TOL_3400 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump D TOL_3549 putative multi antimicrobial extrusion protein MatE/Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump D TOL_2316 Major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D TOL_1449 nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D TOL_2826 major facilitator superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D TOL_1242 Major facilitator superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D TOL_0825 Bcr/CflA subfamily drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D TOL_3602 signal transduction protein K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D TOL_3104 Phosphocarrier protein2C nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr D TOL_3102 ptsN gene product K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D TOL_0065 hypothetical protein K10716 kch; voltage-gated potassium channel D TOL_3479 potassium channel protein K10716 kch; voltage-gated potassium channel D TOL_2633 Kef-type K+ transport system, NAD-binding component K08714 VGSC; voltage-gated sodium channel D TOL_1199 Ammonia permease K03320 amt; ammonium transporter, Amt family D TOL_3568 ammonium transporter K03320 amt; ammonium transporter, Amt family D TOL_0294 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D TOL_0747 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D TOL_2332 glutathione S-transferase-like protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D TOL_0404 glutathione S-transferase-like protein K03599 sspA; stringent starvation protein A D TOL_1187 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D TOL_1188 von Willebrand factor A K07114 yfbK; Ca-activated chloride channel homolog D TOL_1318 TEGT family transporter K19416 yccA; modulator of FtsH protease D TOL_0041 formate/nitrate transporter K21993 fdhC; formate transporter D TOL_3657 MscS Mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D TOL_0015 small-conductance mechanosensitive channel-like protein K22044 ybiO; moderate conductance mechanosensitive channel D TOL_3198 Small-conductance mechanosensitive channel K16052 ynaI; MscS family membrane protein D TOL_3105 magnesium transporter K06213 mgtE; magnesium transporter D TOL_0624 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA D TOL_3035 Flagellar motor component K02556 motA; chemotaxis protein MotA D TOL_3219 flagellar motor protein K02556 motA; chemotaxis protein MotA D TOL_0625 chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D TOL_3034 motility protein, MotA family protein K02557 motB; chemotaxis protein MotB D TOL_3220 flagellar motor protein K02557 motB; chemotaxis protein MotB D TOL_2394 Mot-Exb superfamily outer membrane transport energizer K21218 motY; sodium-type flagellar protein MotY D TOL_1664 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D TOL_1665 TonB system transport protein ExbB2 K03561 exbB; biopolymer transport protein ExbB D TOL_0899 TonB system biopolymer transport component K03561 exbB; biopolymer transport protein ExbB D TOL_0900 TonB system biopolymer transport component K03561 exbB; biopolymer transport protein ExbB D TOL_1880 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D TOL_3293 TolR K03561 exbB; biopolymer transport protein ExbB D TOL_3294 TonB system transport protein ExbB2 K03561 exbB; biopolymer transport protein ExbB D TOL_2760 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D TOL_1604 Biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB D TOL_0901 Biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD D TOL_1666 biopolymer transport exbD2 protein K03559 exbD; biopolymer transport protein ExbD D TOL_1879 ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD D TOL_3295 TonB system transport protein ExbD2 K03559 exbD; biopolymer transport protein ExbD D TOL_2761 hypothetical protein K03559 exbD; biopolymer transport protein ExbD D TOL_2762 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D TOL_2142 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D TOL_2141 biopolymer transport protein ExbD/TolR K03560 tolR; biopolymer transport protein TolR D TOL_0839 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D TOL_2985 metal ion transporter MIT family protein K03284 corA; magnesium transporter D TOL_1788 hypothetical protein K06199 crcB; fluoride exporter D TOL_0541 Mercuric transport protein MerT K08363 merT; mercuric ion transport protein D TOL_0542 mercuric transport protein periplasmic component K08364 merP; periplasmic mercuric ion binding protein D TOL_0972 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D TOL_1111 HCC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D TOL_0246 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D TOL_2360 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D TOL_0891 fadL; FadL family outer membrane protein K06076 fadL; long-chain fatty acid transport protein D TOL_2818 putative TonB-dependent receptor K19611 fepA; ferric enterobactin receptor D TOL_2764 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D TOL_2831 TonB-dependent outer membrane cobalamin receptor K16092 btuB; vitamin B12 transporter D TOL_1464 fpvA2 gene product K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D TOL_0244 TonB-dependent receptor, plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_0662 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_0664 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_3291 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_3338 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_3477 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_0092 predicted TonB-dependent outer membrane thiamine receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_0880 iron complex outermembrane recepter protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D TOL_0548 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D TOL_1691 outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D TOL_3390 hypothetical protein K15725 czcC; outer membrane protein, heavy metal efflux system D TOL_0033 TolC subfamily outer membrane protein K12340 tolC; outer membrane protein D TOL_1356 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D TOL_2533 polysaccharide export protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN D TOL_2438 bamA; outer membrane beta-barrel assembly machine subunit BamA K07277 SAM50; outer membrane protein insertion porin family D TOL_0954 bamB; outer membrane beta-barrel assembly machine subunit BamB K17713 bamB; outer membrane protein assembly factor BamB D TOL_2129 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC D TOL_2864 bamD; outer membrane beta-barrel assembly machine subunit BamD K05807 bamD; outer membrane protein assembly factor BamD D TOL_2743 bamE; outer membrane beta-barrel assembly machine subunit BamE K06186 bamE; outer membrane protein assembly factor BamE D TOL_1088 hypothetical protein K21449 ata; trimeric autotransporter adhesin D TOL_0634 hypothetical protein K21449 ata; trimeric autotransporter adhesin D TOL_3098 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA D TOL_3097 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC D TOL_0601 hypothetical protein K04744 lptD; LPS-assembly protein D TOL_0680 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D TOL_2534 hypothetical protein K20920 vpsM; polysaccharide biosynthesis protein VpsM D TOL_0816 CBS domain protein K06189 corC; hemolysin (HlyC) family protein D TOL_3628 hypothetical protein K06518 cidA; holin-like protein D TOL_2662 ethanolamine transporter K16238 eat; ethanolamine permease D TOL_0552 cation efflux family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein D TOL_1735 Cadmium, cobalt and zinc/H(+)-K(+) antiporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D TOL_1048 Cobalt-zinc-cadmium resistance protein K13283 fieF; ferrous-iron efflux pump FieF D TOL_0550 CzcA family heavy metal efflux protein K15726 czcA; heavy metal efflux system protein D TOL_1682 CzcA family heavy metal efflux protein K15726 czcA; heavy metal efflux system protein D TOL_3392 CzcA family heavy metal efflux protein K15726 czcA; heavy metal efflux system protein D TOL_0573 cation efflux system protein cusA K07787 cusA; copper/silver efflux system protein D TOL_1704 Co/Zn/Cd efflux system membrane component K07787 cusA; copper/silver efflux system protein D TOL_2949 heavy metal efflux pump, CzcA family K07787 cusA; copper/silver efflux system protein D TOL_1027 acrB gene product K18138 acrB; multidrug efflux pump D TOL_1152 acriflavin resistance protein K18989 vexF; multidrug efflux pump D TOL_2369 transporter permease protein, partial K15269 pecM; probable blue pigment (indigoidine) exporter D TOL_0553 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D TOL_2966 Uncharacterized BCR, YnfA/UPF0060 family K09771 TC.SMR3; small multidrug resistance family-3 protein D TOL_2967 Uncharacterized BCR, YnfA/UPF0060 family K09771 TC.SMR3; small multidrug resistance family-3 protein D TOL_0754 choline/carnitine/betaine transporter K02168 betT; choline/glycine/proline betaine transport protein D TOL_3095 Ca2+/Na+ antiporter K07301 yrbG; cation:H+ antiporter D TOL_1096 acetate permease K14393 actP; cation/acetate symporter D TOL_1105 putative sodium symporter protein K14393 actP; cation/acetate symporter D TOL_1841 sodium/proton antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family D TOL_0734 transporter, CPA2 family K24160 NHA1; sodium/hydrogen antiporter D TOL_2647 glutathione-regulated potassium efflux system protein KefC-like protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D TOL_2648 NAD(P)H dehydrogenase (quinone) K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D TOL_1410 Trk-type K+ transport system, membrane component K03498 trkH; trk/ktr system potassium uptake protein D TOL_0124 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D TOL_0123 trkA gene product K03499 trkA; trk/ktr system potassium uptake protein D TOL_0310 Cl-channel, voltage-gated family protein K03281 clcA; chloride channel protein, CIC family D TOL_1686 chromate transporter K07240 chrA; chromate transporter D TOL_0125 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D TOL_2027 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D TOL_3420 dctQ1; TRAP dicarboxylate transporter, nner membrane small subunit Q K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D TOL_3421 dctM1; TRAP dicarboxylate transporter, inner membrane large subunit M K11690 dctM; C4-dicarboxylate transporter, DctM subunit D TOL_2631 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter D TOL_3482 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter D TOL_1742 arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter D TOL_2053 arsenical pump membrane protein K03325 ACR3; arsenite transporter D TOL_3230 NADH dehydrogenase (quinone) K05559 phaA; multicomponent K+:H+ antiporter subunit A D TOL_3229 putative monovalent cation/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D TOL_3228 putative monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D TOL_3227 Multisubunit Na+/H+ antiporter, MnhE subunit K05562 phaE; multicomponent K+:H+ antiporter subunit E D TOL_3226 multiple resistance and pH regulation protein F K05563 phaF; multicomponent K+:H+ antiporter subunit F D TOL_3225 monovalent cation/proton antiporter, MnhG/PhaG subunit K05564 phaG; multicomponent K+:H+ antiporter subunit G D TOL_2881 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D TOL_1813 predicted Permease K24180 mleP; malate permease and related proteins D TOL_2309 auxin efflux carrier K24180 mleP; malate permease and related proteins D TOL_2131 perM; PerM family multipass membrane protein K03548 perM; putative permease D TOL_1926 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D TOL_1108 Multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D TOL_2334 multiple antibiotic resistance (MarC)-like protein K05595 marC; multiple antibiotic resistance protein D TOL_0801 ftsW; lipid II flippase K03588 ftsW; cell division protein FtsW D TOL_2946 PF27 family transporter K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D TOL_0544 Iron permease FTR1/Cytochrome c domain protein K07243 FTR; high-affinity iron transporter D TOL_0269 TonB family protein K03832 tonB; periplasmic protein TonB D TOL_0774 hypothetical protein K03832 tonB; periplasmic protein TonB D TOL_1667 tonB2 protein K03832 tonB; periplasmic protein TonB D TOL_0902 putative TonB2 protein K03832 tonB; periplasmic protein TonB D TOL_3296 TonB2 protein K03832 tonB; periplasmic protein TonB D TOL_2763 hypothetical protein K03832 tonB; periplasmic protein TonB D TOL_1607 hypothetical protein K03832 tonB; periplasmic protein TonB D TOL_2138 outer membrane protein K03640 pal; peptidoglycan-associated lipoprotein D TOL_2140 hypothetical protein K03646 tolA; colicin import membrane protein D TOL_1969 hypothetical protein K03646 tolA; colicin import membrane protein D TOL_2897 hypothetical protein K03646 tolA; colicin import membrane protein D TOL_2139 periplasmic component of the Tol biopolymer transport system K03641 tolB; TolB protein D TOL_2689 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D TOL_2690 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D TOL_2691 hypothetical protein K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D TOL_0549 RND family efflux transporter MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D TOL_1683 RND family efflux transporter MFP subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D TOL_3391 secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D TOL_0572 Cu(I)/Ag(I) efflux system membrane protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system D TOL_1703 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D TOL_2950 hypothetical protein K07798 cusB; membrane fusion protein, copper/silver efflux system D TOL_1028 LOW QUALITY PROTEIN: secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1357 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_2201 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1153 hypothetical protein K18990 vexE; membrane fusion protein, multidrug efflux system D TOL_2532 capsular exopolysaccharide family protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3] D TOL_0090 transporter, putative K03811 pnuC; nicotinamide mononucleotide transporter D TOL_1007 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A D TOL_1006 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D TOL_1077 ccmF; heme lyase, subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D TOL_2336 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D TOL_3280 putative transthyretin-like protein precursor K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17] C 02044 Secretion system [BR:tol02044] D TOL_0033 TolC subfamily outer membrane protein K12340 tolC; outer membrane protein D TOL_1889 hypothetical protein K02450 gspA; general secretion pathway protein A D TOL_1888 hypothetical protein K02451 gspB; general secretion pathway protein B D TOL_0609 hypothetical protein K02452 gspC; general secretion pathway protein C D TOL_0610 Type II secretory pathway, component PulD K02453 gspD; general secretion pathway protein D D TOL_1763 general secretory pathway component, cryptic K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D TOL_3581 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D TOL_1762 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D TOL_1761 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D TOL_1760 hypothetical protein K02457 gspH; general secretion pathway protein H D TOL_1759 hypothetical protein K02458 gspI; general secretion pathway protein I D TOL_1758 hypothetical protein K02459 gspJ; general secretion pathway protein J D TOL_1757 hypothetical protein K02460 gspK; general secretion pathway protein K D TOL_1756 hypothetical protein K02461 gspL; general secretion pathway protein L D TOL_1755 hypothetical protein K02462 gspM; general secretion pathway protein M D TOL_0608 hypothetical protein K02463 gspN; general secretion pathway protein N D TOL_0689 Leader peptidase (Prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D TOL_0692 pilin K02650 pilA; type IV pilus assembly protein PilA D TOL_0691 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D TOL_0690 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D TOL_2875 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE D TOL_0950 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF D TOL_0271 hypothetical protein K02657 pilG; twitching motility two-component system response regulator PilG D TOL_0272 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH D TOL_0273 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D TOL_0274 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D TOL_0275 methylase of chemotaxis methyl-accepting protein K02661 pilK; type IV pilus assembly protein PilK D TOL_3242 Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM D TOL_3241 type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN D TOL_3240 type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D TOL_3239 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP D TOL_3238 type 4 fimbrial biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D TOL_3526 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D TOL_3525 twitching motility protein PilU K02670 pilU; twitching motility protein PilU D TOL_2873 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D TOL_2874 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D TOL_2871 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D TOL_1654 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D TOL_2869 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D TOL_1532 hypothetical protein K08086 fimV; pilus assembly protein FimV D TOL_2964 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI D TOL_2962 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ D TOL_2961 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK D TOL_2960 hypothetical protein K12282 mshL; MSHA biogenesis protein MshL D TOL_2958 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ D TOL_3529 hypothetical protein K02221 yggT; YggT family protein D TOL_1128 comEA; DNA uptake protein K02237 comEA; competence protein ComEA D TOL_1881 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D TOL_3361 hypothetical protein K02241 comFB; competence protein ComFB D TOL_2492 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D TOL_2493 Flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB D TOL_1070 hypothetical protein K04061 flhB2; flagellar biosynthesis protein D TOL_2517 flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D TOL_2515 hypothetical protein K02411 fliH; flagellar assembly protein FliH D TOL_2514 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D TOL_2498 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D TOL_2497 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D TOL_2496 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D TOL_2495 flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ D TOL_2494 flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR D TOL_2624 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D TOL_0370 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D TOL_0369 DotU K11892 impK; type VI secretion system protein ImpK D TOL_0368 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D TOL_0378 hypothetical protein K11895 impH; type VI secretion system protein ImpH D TOL_0377 type VI secretion protein, VC_A0110 family K11896 impG; type VI secretion system protein ImpG D TOL_0376 type VI secretion system lysozyme-related protein K11897 impF; type VI secretion system protein ImpF D TOL_0374 type VI secretion protein, EvpB/family K11900 impC; type VI secretion system protein ImpC D TOL_3013 hypothetical protein K11900 impC; type VI secretion system protein ImpC D TOL_0373 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D TOL_0372 type VI secretion-associated protein, ImpA family K11902 impA; type VI secretion system protein ImpA D TOL_0388 hemolysin-coregulated protein K11903 hcp; type VI secretion system secreted protein Hcp D TOL_0387 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D TOL_0367 hypothetical protein K11906 vasD; type VI secretion system protein VasD D TOL_0379 type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG D TOL_0371 type VI secretion-associated protein, BMA_A0400 family K11890 impM; type VI secretion system protein ImpM D TOL_0375 type VI secretion protein, EvpB/family K11899 impD; type VI secretion system protein ImpD D TOL_0366 hypothetical protein K11913 fha1; type VI secretion system protein D TOL_0810 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D TOL_2976 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D TOL_1313 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD D TOL_3463 translocase K03073 secE; preprotein translocase subunit SecE D TOL_1314 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF D TOL_2720 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG D TOL_3430 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D TOL_0974 ffh; signal recognition particle GTPase K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D TOL_0136 ftsY; signal recognition particle receptor K03110 ftsY; fused signal recognition particle receptor D TOL_1312 YajC K03210 yajC; preprotein translocase subunit YajC D TOL_3729 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase D TOL_0233 tatA gene product K03116 tatA; sec-independent protein translocase protein TatA D TOL_0232 hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB D TOL_0231 Twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tol02042] D TOL_0972 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D TOL_1111 HCC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D TOL_0606 channel protein (hemolysin III family protein) K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:tol02022] D TOL_0150 phoR1; sensor signal transduction histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D TOL_0158 phoR2; sensor signal transduction histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D TOL_0151 phoB1; DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D TOL_0159 phoB2; DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D TOL_2469 integral membrane sensor signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D TOL_2470 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07661 rstA; two-component system, OmpR family, response regulator RstA D TOL_3624 Signal transduction histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D TOL_3625 DNA-binding response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR D TOL_3360 two component transcriptional regulator, winged helix family K07662 cpxR; two-component system, OmpR family, response regulator CpxR D TOL_0556 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_1709 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_0557 heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D TOL_1710 heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D TOL_0788 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D TOL_1929 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D TOL_3359 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D TOL_0789 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D TOL_1930 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D TOL_3712 two-component response regulator receiver K02483 K02483; two-component system, OmpR family, response regulator D TOL_0926 signal transduction histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D TOL_1776 gacA gene product K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D TOL_3677 alginate biosynthesis protein AlgZ/FimS K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D TOL_3676 LytTr DNA-binding domain family K08083 algR; two-component system, LytTR family, response regulator AlgR D TOL_2956 Signal transduction histidine kinase, nitrogen specific K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D TOL_2957 two-component response regulator NtrC K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D TOL_3000 probable two-component response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D TOL_2867 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D TOL_2868 two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D TOL_1030 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_2426 PAS/PAC sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_3215 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_2650 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D TOL_2486 probable two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2510 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2488 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2511 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2100 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2485 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_2505 two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_1486 putative CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_2596 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_0276 sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D TOL_0271 hypothetical protein K02657 pilG; twitching motility two-component system response regulator PilG D TOL_0272 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH D TOL_0277 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D TOL_2520 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D TOL_2519 Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D TOL_0333 hypothetical protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D TOL_0332 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 regA; two-component system, response regulator RegA D TOL_0666 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_1581 sensory box histidine kinase/response regulator K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_2357 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_3630 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D TOL_2502 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB D TOL_2503 two-component response regulator K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D TOL_1988 signal transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D TOL_1457 hypothetical protein K22067 nasS; two-component system, oxyanion-binding sensor D TOL_1458 response regulator NasT K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D TOL_1413 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS D TOL_2104 hypothetical protein K20971 ladS; two-component system, sensor histidine kinase LadS D TOL_2857 hypothetical protein K20972 retS; two-component system, sensor histidine kinase RetS C 02035 Bacterial motility proteins [BR:tol02035] D TOL_2486 probable two-component sensor K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2510 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D TOL_2481 purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2482 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D TOL_2509 Purine-binding chemotaxis protein cheW K03408 cheW; purine-binding chemotaxis protein CheW D TOL_1350 chemotaxis protein CheC K03409 cheX; chemotaxis protein CheX D TOL_2101 hypothetical protein K03410 cheC; chemotaxis protein CheC D TOL_2506 CheD, stimulates methylation of MCP proteins K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D TOL_2595 putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TOL_2507 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D TOL_2485 chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_2505 two-component system, chemotaxis family, response regulator CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D TOL_2488 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2511 CheY-like receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2100 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D TOL_2487 Chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D TOL_1486 putative CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_2596 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D TOL_1306 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0109 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D TOL_0306 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0359 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0763 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1550 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1557 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_1785 Methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_0708 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2331 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2948 probable chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein D TOL_2365 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2508 probable methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D TOL_2467 hypothetical protein K03776 aer; aerotaxis receptor D TOL_2515 hypothetical protein K02411 fliH; flagellar assembly protein FliH D TOL_2514 flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D TOL_2513 hypothetical protein K02413 fliJ; flagellar protein FliJ D TOL_2497 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D TOL_2496 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D TOL_2495 flagellar biosynthesis protein K02420 fliQ; flagellar biosynthesis protein FliQ D TOL_2494 flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR D TOL_2492 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D TOL_2493 Flagellar biosynthesis pathway, component FlhB K02401 flhB; flagellar biosynthesis protein FlhB D TOL_0623 hypothetical protein K02410 fliG; flagellar motor switch protein FliG D TOL_2516 flagellar motor protein K02410 fliG; flagellar motor switch protein FliG D TOL_2499 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D TOL_2498 Surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN D TOL_2517 flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF D TOL_2583 Flagellar basal-body P-ring protein K02394 flgI; flagellar P-ring protein FlgI D TOL_2597 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D TOL_2587 Flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D TOL_3638 flagellar protein K02415 fliL; flagellar protein FliL D TOL_2500 flagellar protein K02415 fliL; flagellar protein FliL D TOL_2518 flagellar hook-basal body complex protein (FliE) K02408 fliE; flagellar hook-basal body complex protein FliE D TOL_2501 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D TOL_2594 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D TOL_2593 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D TOL_2592 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D TOL_2589 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D TOL_2588 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D TOL_2582 Muramidase (flagellum-specific) K02395 flgJ; peptidoglycan hydrolase FlgJ D TOL_2591 Flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D TOL_2581 flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1 D TOL_2580 flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL D TOL_2599 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D TOL_0589 hypothetical protein K09860 flgP; outer membrane protein FlgP D TOL_2394 Mot-Exb superfamily outer membrane transport energizer K21218 motY; sodium-type flagellar protein MotY D TOL_2530 hypothetical protein K02406 fliC; flagellin D TOL_2522 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D TOL_2489 flagellar biosynthesis sigma factor K02405 fliA; RNA polymerase sigma factor FliA D TOL_0624 chemotaxis MotA protein K02556 motA; chemotaxis protein MotA D TOL_3035 Flagellar motor component K02556 motA; chemotaxis protein MotA D TOL_3219 flagellar motor protein K02556 motA; chemotaxis protein MotA D TOL_0625 chemotaxis MotB protein K02557 motB; chemotaxis protein MotB D TOL_3034 motility protein, MotA family protein K02557 motB; chemotaxis protein MotB D TOL_3220 flagellar motor protein K02557 motB; chemotaxis protein MotB D TOL_2521 transcriptional regulator FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D TOL_2520 two-component sensor K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D TOL_2519 Fis family two component sigma-54 specific transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D TOL_2598 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 flgM; negative regulator of flagellin synthesis FlgM D TOL_2529 hypothetical protein K06603 flaG; flagellar protein FlaG D TOL_2491 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF D TOL_2490 cobyrinic acid a,c-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG D TOL_0271 hypothetical protein K02657 pilG; twitching motility two-component system response regulator PilG D TOL_0272 Response regulator receiver domain protein (CheY) K02658 pilH; twitching motility two-component system response regulator PilH D TOL_0273 Chemotaxis signal transduction protein K02659 pilI; twitching motility protein PilI D TOL_0274 Methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D TOL_0275 methylase of chemotaxis methyl-accepting protein K02661 pilK; type IV pilus assembly protein PilK D TOL_0276 sensor histidine kinase/response regulator K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D TOL_2868 two-component response regulator PilR K02667 pilR; two-component system, NtrC family, response regulator PilR D TOL_2867 hypothetical protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D TOL_3526 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D TOL_3525 twitching motility protein PilU K02670 pilU; twitching motility protein PilU D TOL_0277 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D TOL_0278 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC D TOL_0692 pilin K02650 pilA; type IV pilus assembly protein PilA D TOL_0691 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D TOL_0690 Type II secretory pathway, component PulF K02653 pilC; type IV pilus assembly protein PilC D TOL_0689 Leader peptidase (Prepilin peptidase) / N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D TOL_0950 hypothetical protein K02656 pilF; type IV pilus assembly protein PilF D TOL_3238 type 4 fimbrial biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ D TOL_3239 Type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP D TOL_3240 type 4 fimbrial biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D TOL_3241 type 4 fimbrial biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN D TOL_3242 Tfp pilus assembly protein, ATPase PilM K02662 pilM; type IV pilus assembly protein PilM D TOL_1654 Tfp pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D TOL_2873 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D TOL_2874 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D TOL_2871 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D TOL_2875 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tol04812] D TOL_3113 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D TOL_0807 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TOL_0806 cell division protein FtsA K03590 ftsA; cell division protein FtsA D TOL_2938 septum formation inhibitor K03610 minC; septum site-determining protein MinC D TOL_2939 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D TOL_2940 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D TOL_3705 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D TOL_3644 putative partition-related protein K03496 parA; chromosome partitioning protein D TOL_2484 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D TOL_3704 chromosome partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tol04147] D TOL_2091 heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG D TOL_3076 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D TOL_2077 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D TOL_3269 3-phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D TOL_2308 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D TOL_0775 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D TOL_0725 RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60 chaperonin 60 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D TOL_2739 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D TOL_3006 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D TOL_1265 inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D TOL_3452 translation elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3465 elongation factor Tu K02358 tuf; elongation factor Tu D TOL_3467 elongation factor Tu K02358 tuf; elongation factor Tu D TOL_0234 probable HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D TOL_3248 protein kinase C inhibitor K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D TOL_1609 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2208 acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_2038 acyl-CoA synthase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D TOL_1241 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0716 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0633 Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_3544 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D TOL_0288 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D TOL_0933 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D TOL_3678 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D TOL_2393 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D TOL_0667 inositol phosphatase/fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D TOL_2466 glpK gene product K00864 glpK; glycerol kinase [EC:2.7.1.30] D TOL_1467 glutamine synthetase catalytic region K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_2411 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3620 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D TOL_3559 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D TOL_0620 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D TOL_0628 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D TOL_3245 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D TOL_2855 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D TOL_1496 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D TOL_1765 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D TOL_2115 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D TOL_2721 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D TOL_0247 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:tol02048] D TOL_2232 cas1 gene product K15342 cas1; CRISP-associated protein Cas1 D TOL_2231 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 D TOL_2238 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D TOL_2233 CRISPR-associated exonuclease Cas4 family protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TOL_2235 CRISPR-associated protein, CT1133 family K19117 csd1; CRISPR-associated protein Csd1 D TOL_2234 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2 D TOL_2236 CRISPR-associated protein, Csd5d family K19119 cas5d; CRISPR-associated protein Cas5d D TOL_0978 type I site-specific deoxyribonuclease, HsdR family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D TOL_2749 Restriction endonuclease, type I, EcoRI, R subunit/Type III K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D TOL_3496 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D TOL_0981 type I restriction-modification system specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D TOL_2754 restriction enzyme, Res subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D TOL_3501 restriction endonuclease S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D TOL_0983 type I restriction-modification system DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D TOL_0188 type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D TOL_2755 restriction-modification system methylation subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D TOL_3502 type I restriction system adenine methylase HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D TOL_0429 type III restriction enzyme, Res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] D TOL_0430 type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D TOL_1506 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D TOL_2392 plasmid stabilization system K06218 relE; mRNA interferase RelE/StbE D TOL_1224 Txe/YoeB family toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D TOL_1223 Phd_YefM family antitoxin K19159 yefM; antitoxin YefM D TOL_0180 HipA toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_0184 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_2044 HipA domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_3720 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D TOL_0420 plasmid stabilization system K19092 parE1_3_4; toxin ParE1/3/4 D TOL_0421 CopG family transcriptional regulator K07746 parD1_3_4; antitoxin ParD1/3/4 D TOL_0198 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D TOL_0197 transcriptional regulator, XRE family K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D TOL_0807 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D TOL_3113 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D TOL_0026 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D TOL_0028 parD; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D TOL_1907 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TOL_0911 hypothetical protein K09159 cptB; antitoxin CptB D TOL_0947 cysteine desulfurase used in synthesis of Fe-S cluster (tRNA4-thiouridine sulfur transferase) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:tol04090] C 01504 Antimicrobial resistance genes [BR:tol01504] D TOL_0556 heavy metal sensor signal transduction histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_1709 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D TOL_0557 heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D TOL_1710 heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D TOL_1028 LOW QUALITY PROTEIN: secretion protein HlyD family protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1357 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_2201 membrane-fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system D TOL_1027 acrB gene product K18138 acrB; multidrug efflux pump D TOL_1356 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D TOL_0033 TolC subfamily outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tol00537] D TOL_0628 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tol03100] D TOL_1906 tRNA_Ala(GGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TOL_0321 tRNA_Ala(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala D TOL_3494 tRNA_Arg(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_0450 tRNA_Arg(ACG)1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_0451 tRNA_Arg(ACG)2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_1856 tRNA_Arg(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_2601 tRNA_Arg(CCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg D TOL_2118 tRNA_Asn(GTT)1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TOL_2265 tRNA_Asn(GTT)2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn D TOL_1849 tRNA_Asp(GTC)4; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1146 tRNA_Asp(GTC)1; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1148 tRNA_Asp(GTC)2; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1150 tRNA_Asp(GTC)3; tRNA-Asp K14221 tRNA-Asp; tRNA Asp D TOL_1772 tRNA_Cys(GCA); tRNA-Cys K14222 tRNA-Cys; tRNA Cys D TOL_0830 tRNA_Gln(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln D TOL_1905 tRNA_Glu(TTC)1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TOL_1946 tRNA_Glu(TTC)3; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TOL_1944 tRNA_Glu(TTC)2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu D TOL_1773 tRNA_Gly(GCC)1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_1945 tRNA_Gly(GCC)3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_1943 tRNA_Gly(GCC)2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_3469 tRNA_Gly(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly D TOL_1855 tRNA_His(GTG); tRNA-His K14226 tRNA-His; tRNA His D TOL_0320 tRNA_Ile(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile D TOL_1309 tRNA_Leu(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_2719 tRNA_Leu(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_1308 tRNA_Leu(CAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_1771 tRNA_Leu(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_3627 tRNA_Leu(TAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu D TOL_2135 tRNA_Lys(TTT)1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TOL_2136 tRNA_Lys(TTT)2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys D TOL_1020 tRNA_iMet(CAT)1; tRNA-Met K14230 tRNA-Met; tRNA Met D TOL_1021 tRNA_iMet(CAT)2; tRNA-Met K14230 tRNA-Met; tRNA Met D TOL_0578 tRNA_Ile(CAT); tRNA-Ile K14230 tRNA-Met; tRNA Met D TOL_1292 tRNA_Met(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met D TOL_0349 tRNA_Phe(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe D TOL_1857 tRNA_Pro(TGG)1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TOL_2119 tRNA_Pro(TGG)2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TOL_2181 tRNA_Pro(GGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro D TOL_1935 tRNA_Ser(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TOL_0449 tRNA_Ser(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TOL_1779 tRNA_Ser(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser D TOL_0152 tRNA_Thr(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TOL_3468 tRNA_Thr(GGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr D TOL_3464 tRNA_Trp(CCA); tRNA-Trp K14235 tRNA-Trp; tRNA Trp D TOL_3470 tRNA_Tyr(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D TOL_1147 tRNA_Val(TAC)1; tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_1149 tRNA_Val(TAC)2; tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_1151 tRNA_Val(TAC)3; tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_2251 tRNA_Val(GAC); tRNA-Val K14237 tRNA-Val; tRNA Val D TOL_2455 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_3255 rrsD; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_3252 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_0319 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D TOL_0322 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_3254 rrlD; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_3251 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_2454 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D TOL_2453 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_3253 rrfD; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_0323 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_3250 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D TOL_1584 ffs; bacterial small signal recognition particle RNA K01983 ffs; SRP RNA D TOL_0854 rnpB; RNA component of bacterial RNase P class A K01978 rnpB; M1 RNA D TOL_2748 ssrA; ssrA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D TOL_1859 PQQ-dependent oxidoreductase, gdhB family K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D TOL_0223 NAD-dependent aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D TOL_1412 NADH:flavin oxidoreductase, Old Yellow Enzyme family protein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D TOL_1767 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D TOL_2805 putative NAD/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5] D TOL_2458 medium chain dehydrogenases/reductase/zinc-dependent alcohol dehydrogenase-like family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D TOL_2666 flavoprotein K03206 azr; azobenzene reductase [EC:1.7.1.6] D TOL_3193 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D TOL_1012 methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D TOL_1950 methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D TOL_2667 Glutathione S-transferase domain protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D TOL_3257 hypothetical protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D TOL_2474 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D TOL_1103 peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D TOL_3194 alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D TOL_1986 hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D TOL_1517 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D TOL_2449 pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D TOL_2766 Fe(II)-dependent oxygenase superfamily protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D TOL_1916 flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D TOL_2371 oxidoreductase FAD/NAD(P)-binding subunit K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D TOL_1741 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D TOL_2326 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D TOL_1248 glutaredoxin NrdH-like protein K18917 mrx1; mycoredoxin [EC:1.20.4.3] D TOL_2054 protein-tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D TOL_1744 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D TOL_3060 L-isoaspartate protein carboxylmethyltransferase type II K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D TOL_2815 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D TOL_2727 3-oxoacyl-(acyl-carrier-protein) synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D TOL_0815 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D TOL_2057 putative acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D TOL_1792 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D TOL_1546 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D TOL_0293 hypothetical protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D TOL_1793 arginyl-tRNA-protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D TOL_0764 glucosylglycerol-phosphate synthase K03692 E2.4.1.213; glucosylglycerol-phosphate synthase [EC:2.4.1.213] D TOL_0110 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D TOL_3597 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D TOL_1299 ApbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D TOL_1810 thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D TOL_1628 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D TOL_0298 Glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D TOL_3066 diguanylate cyclase K18967 dge1; diguanylate cyclase [EC:2.7.7.65] D TOL_2783 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D TOL_2143 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D TOL_3018 predicted thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D TOL_2646 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D TOL_2771 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D TOL_2303 phosphotransferase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D TOL_1823 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D TOL_3646 beta-lactamase-like protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D TOL_0738 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D TOL_1013 putative deoxyribonuclease YjjV K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D TOL_0120 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D TOL_3107 amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D TOL_3302 hydroxydechloroatrazine ethylaminohydrolase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32] D TOL_3582 hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25] D TOL_2564 NUDIX hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D TOL_0611 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D TOL_0291 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D TOL_1544 MoxR protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D TOL_1191 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D TOL_3030 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D TOL_0668 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D TOL_1024 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D TOL_1400 electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D TOL_1401 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D TOL_1402 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D TOL_2076 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D TOL_2075 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D TOL_2074 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D TOL_2073 NADH-ubiquinone oxidoreductase K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D TOL_2072 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D TOL_2071 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D TOL_2005 probable cation-transporting P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D TOL_2994 Sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A D TOL_1238 signal transduction protein K04767 acuB; acetoin utilization protein AcuB C 99982 Energy metabolism D TOL_3130 ferredoxin K05524 fdxA; ferredoxin D TOL_2473 hypothetical protein K11107 yfaE; ferredoxin D TOL_1399 predicted NADH:ubiquinone oxidoreductase, subunit RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D TOL_1398 NADH-ubiquinone oxidoreductase K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D TOL_1403 predicted NADH:ubiquinone oxidoreductase, subunit RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D TOL_3349 flavodoxin K03839 fldA; flavodoxin I D TOL_1766 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D TOL_0156 putative sulfate transport protein CysZ K06203 cysZ; CysZ protein D TOL_3527 type III PLP-dependent enzyme K06997 yggS; PLP dependent protein D TOL_1869 N-acetyltransferase GCN5 K22479 argA; N-acetyltransferase C 99986 Glycan metabolism D TOL_1480 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D TOL_3672 hypothetical protein K02498 hemY; HemY protein D TOL_0237 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D TOL_0238 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D TOL_3571 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D TOL_1171 putative p-aminobenzoyl-glutamate transport protein (AbgT family) K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D TOL_0871 hypothetical protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D TOL_1180 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D TOL_2354 carboxylesterase K06999 K06999; phospholipase/carboxylesterase D TOL_1777 Acyl-CoA synthetase (NDP forming) K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D TOL_1797 cspA3; cold-inducible RNA chaperone and anti-terminator K03704 cspA; cold shock protein D TOL_0941 cspA1; cold-inducible RNA chaperone and anti-terminator K03704 cspA; cold shock protein D TOL_1001 cspA2; cold-inducible RNA chaperone and anti-terminator K03704 cspA; cold shock protein D TOL_3641 Regulator of sigma D K07740 rsd; regulator of sigma D D TOL_3569 regulatory protein, P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase) K04752 glnK; nitrogen regulatory protein P-II 2 D TOL_3636 S1 RNA binding domain protein K06959 tex; protein Tex C 99974 Translation D TOL_2537 RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein D TOL_2705 RNA processing exonuclease K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D TOL_1796 clpS gene product K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D TOL_1854 trigger factor K03545 tig; trigger factor D TOL_3256 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D TOL_0966 Urease accessory protein UreE K03187 ureE; urease accessory protein D TOL_0965 urease accessory protein ureF K03188 ureF; urease accessory protein D TOL_0964 urease accessory protein ureG K03189 ureG; urease accessory protein D TOL_0970 urease accessory protein UreD K03190 ureD; urease accessory protein D TOL_0963 HupE/UreJ protein K03192 ureJ; urease accessory protein D TOL_2747 SmpB protein K03664 smpB; SsrA-binding protein D TOL_0050 Mg chelatase K07391 comM; magnesium chelatase family protein D TOL_2947 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D TOL_0872 putative proteasome-type protease K07395 K07395; putative proteasome-type protease D TOL_0655 hypothetical protein K07397 yhfA; putative redox protein D TOL_1829 Thioredoxin-like protein K07400 nfuA; Fe/S biogenesis protein NfuA D TOL_2307 selW; selenoprotein W-like protein K07401 K07401; selenoprotein W-related protein D TOL_3283 Xanthine and CO dehydrogenase maturation factor,XdhC/CoxF family protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D TOL_0711 putative methylated-DNA binding protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D TOL_1573 exodeoxyribonuclease IX K01146 xni; protein Xni D TOL_0211 radC gene product K03630 radC; DNA repair protein RadC D TOL_2696 hypothetical protein K09760 rmuC; DNA recombination protein RmuC D TOL_0841 hypothetical protein K07460 yraN; putative endonuclease D TOL_0607 hypothetical protein K07461 K07461; putative endonuclease D TOL_0118 DNA protecting protein DprA K04096 smf; DNA processing protein D TOL_1789 recombination factor protein RarA K07478 ycaJ; putative ATPase D TOL_0186 inner membrane protein K06919 K06919; putative DNA primase/helicase D TOL_1337 transposase orfA K07483 K07483; transposase D TOL_1440 transposase IS3/IS911 family protein K07483 K07483; transposase D TOL_1508 transposase orfA K07483 K07483; transposase D TOL_0011 transposase orfA K07483 K07483; transposase D TOL_1164 transposase orfA K07483 K07483; transposase D TOL_1922 transposase orfA K07483 K07483; transposase D TOL_1933 transposase orfA K07483 K07483; transposase D TOL_2176 transposase orfA K07483 K07483; transposase D TOL_3321 transposase orfA K07483 K07483; transposase D TOL_2797 transposase orfA K07483 K07483; transposase D TOL_2560 transposase orfA K07483 K07483; transposase D TOL_1225 transposase orfA K07483 K07483; transposase D TOL_1867 transposase orfA K07483 K07483; transposase D TOL_1287 transposase IS66 K07484 K07484; transposase D TOL_1288 IS66 Orf2 family protein K07484 K07484; transposase D TOL_0424 transposase IS66 K07484 K07484; transposase D TOL_0425 IS66 Orf2 family protein K07484 K07484; transposase D TOL_0536 transposase IS66 K07484 K07484; transposase D TOL_0537 IS66 Orf2 family protein K07484 K07484; transposase D TOL_3120 IS66 Orf2 family protein K07484 K07484; transposase D TOL_3121 transposase IS66 K07484 K07484; transposase D TOL_2636 transposase IS66 K07484 K07484; transposase D TOL_2637 IS66 Orf2 family protein K07484 K07484; transposase D TOL_3318 hypothetical protein K07484 K07484; transposase D TOL_3323 transposase IS66 K07484 K07484; transposase D TOL_3324 IS66 Orf2 family protein K07484 K07484; transposase D TOL_2800 IS66 Orf2 family protein K07484 K07484; transposase D TOL_2801 transposase IS66 K07484 K07484; transposase D TOL_2270 transposase IS66 K07484 K07484; transposase D TOL_2271 IS66 Orf2 family protein K07484 K07484; transposase D TOL_3490 transposase IS66 K07484 K07484; transposase D TOL_3491 IS66 Orf2 family protein K07484 K07484; transposase D TOL_0389 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D TOL_0419 transposase K07491 rayT; REP-associated tyrosine transposase D TOL_2586 hypothetical protein K07491 rayT; REP-associated tyrosine transposase D TOL_1338 transposase orfB K07497 K07497; putative transposase D TOL_0012 transposase orfB K07497 K07497; putative transposase D TOL_1923 transposase orfB K07497 K07497; putative transposase D TOL_1932 transposase orfB K07497 K07497; putative transposase D TOL_2559 transposase orfB K07497 K07497; putative transposase D TOL_3320 transposase orfB K07497 K07497; putative transposase D TOL_2796 transposase orfB K07497 K07497; putative transposase D TOL_1165 transposase orfB K07497 K07497; putative transposase D TOL_1226 transposase orfB K07497 K07497; putative transposase D TOL_0455 hypothetical protein K07497 K07497; putative transposase D TOL_0785 hypothetical protein K07497 K07497; putative transposase D TOL_1509 transposase orfB K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D TOL_0720 phage shock protein A, PspA K03969 pspA; phage shock protein A D TOL_1804 hypothetical protein K03972 pspE; phage shock protein E D TOL_1586 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC D TOL_2778 deoxyribodipyrimidine photolyase K25656 cry; cryptochrome B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D TOL_2746 NSS family transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D TOL_0694 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D TOL_1004 putative Na+-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D TOL_3586 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D TOL_2304 Intracellular septation protein IspA K06190 ispZ; intracellular septation protein D TOL_0591 hypothetical protein K06415 spoVR; stage V sporulation protein R D TOL_2979 Membrane-bound metallopeptidase K22719 envC; murein hydrolase activator C 99993 Cell motility D TOL_0097 hypothetical protein K07337 K07337; penicillin-binding protein activator D TOL_1206 competence-specific genes regulator K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D TOL_0696 hypothetical protein K03807 ampE; AmpE protein D TOL_1526 hypothetical protein K14055 uspE; universal stress protein E D TOL_3621 GTP-binding multipass membrane protein K06207 typA; GTP-binding protein D TOL_1915 HPP family protein K07168 K07168; CBS domain-containing membrane protein D TOL_3362 hypothetical protein K07168 K07168; CBS domain-containing membrane protein D TOL_0818 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D TOL_2618 phosphate starvation-inducible protein PhoH-like ATPase K07175 phoH2; PhoH-like ATPase D TOL_0593 hypothetical protein K07180 prkA; serine protein kinase D TOL_1097 Signal transduction protein K07182 K07182; CBS domain-containing protein D TOL_2306 SH3 domain protein K07184 ygiM; SH3 domain protein D TOL_2827 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D TOL_1790 lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein D TOL_0832 molecular chaperone LolB K02494 lolB; outer membrane lipoprotein LolB D TOL_1614 vacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D TOL_2437 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D TOL_3058 peptidase M23/LysM domain protein K06194 nlpD; lipoprotein NlpD D TOL_0287 hypothetical protein K07265 kpsS; capsular polysaccharide export protein D TOL_2035 outer membrane protein W K07275 ompW; outer membrane protein D TOL_3552 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein D TOL_1348 hypothetical protein K07285 slp; outer membrane lipoprotein D TOL_2153 hypothetical protein K07286 yajG; uncharacterized lipoprotein D TOL_2165 membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein D TOL_3626 Putative transport protein K11744 tqsA; AI-2 transport protein TqsA D TOL_1076 ccmE; periplasmic heme chaperone CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D TOL_1079 ccmH1; heme lyase, subunit CcmH1 K02200 ccmH; cytochrome c-type biogenesis protein CcmH D TOL_1080 ccmH2; cytochrome c biogenesis complex, subunit CcmH2 K02200 ccmH; cytochrome c-type biogenesis protein CcmH C 99994 Others D TOL_0148 phosphate transporter regulatory protein PhoU K02039 phoU; phosphate transport system protein D TOL_2527 BFD-like (2Fe-2S)-binding region protein K02192 bfd; bacterioferritin-associated ferredoxin D TOL_0597 ApaG domain protein K06195 apaG; ApaG protein D TOL_2403 hypothetical protein K07216 hr; hemerythrin D TOL_3605 hypothetical protein K07231 K07231; putative iron-regulated protein D TOL_0560 CPx-type copper ATPase K07233 pcoB; copper resistance protein B D TOL_1712 copper resistance protein B precursor K07233 pcoB; copper resistance protein B D TOL_1927 hypothetical protein K07233 pcoB; copper resistance protein B B B 09194 Poorly characterized C 99996 General function prediction only D TOL_1541 cvpA; CvpA family membrane protein K03558 cvpA; membrane protein required for colicin V production D TOL_2069 hypothetical protein K03791 K03791; putative chitinase D TOL_1058 hypothetical protein K03796 bax; Bax protein D TOL_1418 hypothetical protein K06886 glbN; hemoglobin D TOL_1102 hypothetical protein K06886 glbN; hemoglobin D TOL_1210 Patatin K07001 K07001; NTE family protein D TOL_2319 Patatin K07001 K07001; NTE family protein D TOL_0314 HesB/YadR/YfhF family protein K15724 erpA; iron-sulfur cluster insertion protein D TOL_2347 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D TOL_2349 sufD gene product K09015 sufD; Fe-S cluster assembly protein SufD D TOL_2202 hypothetical protein K07038 K07038; inner membrane protein D TOL_2325 hypothetical protein K07058 K07058; membrane protein D TOL_0723 fxsA; multipass membrane protein K07113 fxsA; UPF0716 protein FxsA D TOL_3263 sufE; sulfur acceptor protein K02426 sufE; cysteine desulfuration protein SufE D TOL_1396 rhodanese homology domain superfamily protein K07146 K07146; UPF0176 protein D TOL_1802 hypothetical protein K07153 hflD; high frequency lysogenization protein D TOL_1743 NADPH-dependent FMN reductase K11811 arsH; arsenical resistance protein ArsH D TOL_0252 LemA family protein K03744 lemA; LemA protein D TOL_0940 hypothetical protein K03745 slyX; SlyX protein D TOL_1540 hypothetical protein K03749 dedD; DedD protein D TOL_3235 hypothetical protein K03112 damX; DamX protein D TOL_2941 hypothetical membrane protein K03808 pqiA; paraquat-inducible protein A D TOL_3059 hypothetical protein K08974 K08974; putative membrane protein D TOL_0240 hypothetical protein K08993 yhhL; putative membrane protein D TOL_2899 KPSH family membrane protein K09858 K09858; SEC-C motif domain protein D TOL_0888 PhnA protein K06193 phnA; protein PhnA C 99997 Function unknown D TOL_1657 putative ankyrin G K06867 K06867; uncharacterized protein D TOL_1264 hypothetical protein K06889 K06889; uncharacterized protein D TOL_0010 hypothetical protein K06889 K06889; uncharacterized protein D TOL_1383 alpha/beta family hydrolase K06889 K06889; uncharacterized protein D TOL_2604 dienelactone hydrolase-like enzyme K06889 K06889; uncharacterized protein D TOL_1372 predicted Fe-S protein K06938 K06938; uncharacterized protein D TOL_1000 hypothetical protein K06938 K06938; uncharacterized protein D TOL_1518 hypothetical protein K06938 K06938; uncharacterized protein D TOL_1388 hypothetical protein K06940 K06940; uncharacterized protein D TOL_1633 hypothetical protein K06954 K06954; uncharacterized protein D TOL_2813 amine oxidase K06954 K06954; uncharacterized protein D TOL_3212 hypothetical protein K06973 K06973; uncharacterized protein D TOL_2686 hypothetical protein K06975 K06975; uncharacterized protein D TOL_0741 Succinylglutamate desuccinylase/aspartoacylase K06987 K06987; uncharacterized protein D TOL_3505 Succinylglutamate desuccinylase / Aspartoacylase family, putative K06987 K06987; uncharacterized protein D TOL_1623 predicted double-glycine peptidase K06992 K06992; uncharacterized protein D TOL_0029 esterase K07000 K07000; uncharacterized protein D TOL_1109 exporter of the RND superfamily K07003 K07003; uncharacterized protein D TOL_1143 predicted exporters of the RND superfamily protein K07003 K07003; uncharacterized protein D TOL_1352 integral membrane protein K07003 K07003; uncharacterized protein D TOL_3187 hypothetical protein K07003 K07003; uncharacterized protein D TOL_3350 hypothetical protein K07004 K07004; uncharacterized protein D TOL_1553 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein K07006 K07006; uncharacterized protein D TOL_1295 hypothetical protein K07018 K07018; uncharacterized protein D TOL_1115 alpha/beta hydrolase K07019 K07019; uncharacterized protein D TOL_1998 hypothetical protein K07020 K07020; uncharacterized protein D TOL_2017 hypothetical protein K07039 K07039; uncharacterized protein D TOL_0522 metal-dependent hydrolase K07044 K07044; uncharacterized protein D TOL_0523 metal-dependent hydrolase K07044 K07044; uncharacterized protein D TOL_0887 metal-dependent hydrolase K07044 K07044; uncharacterized protein D TOL_0014 metal-dependent hydrolase K07044 K07044; uncharacterized protein D TOL_3725 metal-dependent hydrolase K07044 K07044; uncharacterized protein D TOL_3138 hypothetical protein K07044 K07044; uncharacterized protein D TOL_3140 hypothetical protein K07044 K07044; uncharacterized protein D TOL_3141 hypothetical protein K07044 K07044; uncharacterized protein D TOL_0100 hypothetical protein K07070 K07070; uncharacterized protein D TOL_2803 predicted nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein D TOL_1216 putative nucleotidyltransferase K07074 K07074; uncharacterized protein D TOL_1378 hypothetical protein K07089 K07089; uncharacterized protein D TOL_1739 permease K07089 K07089; uncharacterized protein D TOL_1184 permease K07089 K07089; uncharacterized protein D TOL_1617 TSUP family permease K07090 K07090; uncharacterized protein D TOL_1213 hypothetical protein K07090 K07090; uncharacterized protein D TOL_1227 hypothetical protein K07090 K07090; uncharacterized protein D TOL_3598 predicted Permease K07090 K07090; uncharacterized protein D TOL_3182 hypothetical protein K07090 K07090; uncharacterized protein D TOL_0626 hypothetical protein K07093 K07093; uncharacterized protein D TOL_2163 phosphoribosyltransferase K07101 K07101; uncharacterized protein D TOL_2164 putative hypoxanthine-guanine phosphoribosyltransferase K07101 K07101; uncharacterized protein D TOL_3170 hypothetical protein K07112 K07112; uncharacterized protein D TOL_3171 hypothetical protein K07112 K07112; uncharacterized protein D TOL_0842 hypothetical protein K07121 K07121; uncharacterized protein D TOL_0182 AAA+ superfamily ATPase K07133 K07133; uncharacterized protein D TOL_3159 putative FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein D TOL_0315 hypothetical protein K09004 K09004; uncharacterized protein D TOL_0581 hypothetical protein K09117 K09117; uncharacterized protein D TOL_3530 hypothetical protein K09131 K09131; uncharacterized protein D TOL_2653 protein of unknown function DUF369 K09143 K09143; uncharacterized protein D TOL_2895 hypothetical protein K09158 K09158; uncharacterized protein D TOL_1590 hypothetical protein K09160 K09160; uncharacterized protein D TOL_2814 hypothetical protein K09701 K09701; uncharacterized protein D TOL_0521 hypothetical protein K09768 K09768; uncharacterized protein D TOL_2305 YciI-like protein K09780 K09780; uncharacterized protein D TOL_3080 hypothetical protein K09781 K09781; uncharacterized protein D TOL_0592 hypothetical protein K09786 K09786; uncharacterized protein D TOL_3648 hypothetical protein K09790 K09790; uncharacterized protein D TOL_1876 hypothetical protein K09791 K09791; uncharacterized protein D TOL_2007 hypothetical protein K09792 K09792; uncharacterized protein D TOL_2892 hypothetical protein K09794 K09794; uncharacterized protein D TOL_2981 hypothetical protein K09798 K09798; uncharacterized protein D TOL_2744 protein rnfH K09801 K09801; uncharacterized protein D TOL_3150 hypothetical protein K09807 K09807; uncharacterized protein D TOL_1809 hypothetical protein K05952 K05952; uncharacterized protein D TOL_0758 hypothetical protein K00243 K00243; uncharacterized protein D TOL_3715 hypothetical protein K09822 K09822; uncharacterized protein D TOL_0098 hypothetical protein K09859 K09859; uncharacterized protein D TOL_2154 hypothetical protein K09861 K09861; uncharacterized protein D TOL_0687 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D TOL_3611 hypothetical protein K09895 K09895; uncharacterized protein D TOL_2460 protein YifE K09897 K09897; uncharacterized protein D TOL_2311 cytoplasmic protein K09898 K09898; uncharacterized protein D TOL_1589 hypothetical protein K09902 K09902; uncharacterized protein D TOL_2397 hypothetical protein K09910 K09910; uncharacterized protein D TOL_2161 hypothetical protein K09912 K09912; uncharacterized protein D TOL_1138 hypothetical protein K09916 K09916; uncharacterized protein D TOL_1977 hypothetical protein K09919 K09919; uncharacterized protein D TOL_0031 hypothetical protein K09920 K09920; uncharacterized protein D TOL_0259 hypothetical protein K09921 K09921; uncharacterized protein D TOL_1468 uncharacterized protein conserved in bacteria K09922 K09922; uncharacterized protein D TOL_2004 hypothetical protein K09926 K09926; uncharacterized protein D TOL_1882 multipass membrane protein K09928 K09928; uncharacterized protein D TOL_1613 hypothetical protein K09929 K09929; uncharacterized protein D TOL_1612 hypothetical protein K09930 K09930; uncharacterized protein D TOL_3021 hypothetical protein K09937 K09937; uncharacterized protein D TOL_2259 hypothetical protein K09938 K09938; uncharacterized protein D TOL_0165 hypothetical protein K09941 K09941; uncharacterized protein D TOL_3149 hypothetical protein K09948 K09948; uncharacterized protein D TOL_2684 hypothetical protein K09954 K09954; uncharacterized protein D TOL_2416 urea carboxylase-associated protein 2 K09967 K09967; uncharacterized protein D TOL_2417 urea carboxylase-associated protein 1 K09967 K09967; uncharacterized protein D TOL_1134 hypothetical protein K09977 K09977; uncharacterized protein D TOL_0253 hypothetical protein K09978 K09978; uncharacterized protein D TOL_1769 hypothetical protein K09986 K09986; uncharacterized protein D TOL_1595 hypothetical protein K09989 K09989; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024