+D GENES KO
#
KEGG Orthology (KO) - Thermacetogenium phaeum
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tpz00010]
D Tph_c06680 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2]
D Tph_c06670 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tph_c27830 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tph_c05320 D-fructose 1,6-bisphosphatase class V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Tph_c06760 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tph_c06740 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tph_c06750 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tph_c06770 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tph_c06780 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tph_c09390 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tph_c05800 ppdK; pyruvate, phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tph_c19620 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c23870 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c28900 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c23860 vorA1; ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c28890 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:tpz00020]
D Tph_c09030 leuB1; isocitrate/isopropylmalate dehydrogenase LeuB K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c23870 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c28900 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c23860 vorA1; ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c28890 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c23850 porG; pyruvate:ferredoxin oxidoreductase PorG, gamma subunit PorG K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tph_c28880 oorC; 2-oxoacid:ferredoxin oxidoreductase, gamma subunit OorC K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Tph_c17670 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tph_c23840 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tph_c28870 hypothetical protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Tph_c03750 fumA; fumarate hydratase, subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tph_c03760 fumB; fumarate hydratase, subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tph_c19620 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:tpz00030]
D Tph_c06670 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tph_c14210 putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tph_c06510 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tph_c06520 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tph_c27820 fsa; fructose-6-phosphate aldolase Fsa K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Tph_c27500 ywlF; sugar phosphate isomerase YwlF K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Tph_c22680 deoC; deoxyribose-phosphate aldolase DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Tph_c16070 deoB; phosphopentomutase DeoB K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tph_c27250 translation initiation factor IF-2B K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29]
D Tph_c28330 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tph_c04180 aor1; tungsten-containing aldehyde ferredoxin oxidoreductase Aor K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Tph_c20350 aor5; tungsten-containing aldehyde ferredoxin oxidoreductase Aor K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Tph_c08220 aor3; tungsten-containing aldehyde ferredoxin oxidoreductase Aor K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Tph_c07080 aor2; tungsten-containing aldehyde ferredoxin oxidoreductase Aor K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Tph_c27630 aor6; tungsten-containing aldehyde ferredoxin oxidoreductase Aor K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D Tph_c27830 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tph_c05320 D-fructose 1,6-bisphosphatase class V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:tpz00040]
D Tph_c02690 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tph_c05330 gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tph_c14210 putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Tph_c10200 fucA; L-fuculose phosphate aldolase FucA K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:tpz00051]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tph_c09090 glmM1; phosphoglucosamine mutase GlmM K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Tph_c29080 manC1; mannose-1-phosphate guanylyltransferase ManC K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tph_c10200 fucA; L-fuculose phosphate aldolase FucA K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tph_c27830 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tph_c05320 D-fructose 1,6-bisphosphatase class V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Tph_c06760 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Tph_c27500 ywlF; sugar phosphate isomerase YwlF K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:tpz00052]
D Tph_c11780 galT; galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tph_c03640 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tph_c05330 gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tph_c06680 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2]
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:tpz00053]
D Tph_c02690 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tph_c02700 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:tpz00500]
D Tph_c05330 gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tph_c11790 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D Tph_c09150 glycoside hydrolase/deacetylase K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Tph_c26440 malQ; 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Tph_c26460 treZ1; malto-oligosyltrehalose trehalohydrolase TreZ K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D Tph_c26450 treT; trehalose glycosyltransferring synthase TreT K13057 treT; trehalose synthase [EC:2.4.1.245]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tph_c06680 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2]
D Tph_c06670 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tpz00520]
D Tph_c19720 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tph_c19730 glmM2; phosphoglucosamine mutase GlmM K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Tph_c28340 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tph_c12670 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tph_c28070 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tph_c12660 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tph_c27460 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tph_c08150 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase WecC K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D Tph_c06680 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tph_c05330 gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tph_c02690 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tph_c11780 galT; galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Tph_c03640 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tph_c02700 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Tph_c06670 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tph_c09090 glmM1; phosphoglucosamine mutase GlmM K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Tph_c29080 manC1; mannose-1-phosphate guanylyltransferase ManC K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:tpz00620]
D Tph_c23870 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c28900 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c23860 vorA1; ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c28890 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c19620 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c09600 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Tph_c06970 adhE; aldehyde-alcohol dehydrogenase AdhE K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D Tph_c10090 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tph_c10080 pta; phosphate acetyltransferase Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tph_c09390 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tph_c13690 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Tph_c16370 accC; acetyl-CoA carboxylase biotin carboxylase subunit AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Tph_c13700 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Tph_c12480 putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Tph_c27620 hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D Tph_c13240 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tph_c27610 ytsJ; NAD-dependent malic enzyme 4 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tph_c16380 accB acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Tph_c03750 fumA; fumarate hydratase, subunit alpha K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Tph_c03760 fumB; fumarate hydratase, subunit beta K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Tph_c05800 ppdK; pyruvate, phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Tph_c19800 IPM/Hcit synthase-like protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tph_c19840 leuA2; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tph_c08720 nifV; homocitrate synthase NifV K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
D Tph_c09000 leuA1; 2-isopropylmalate synthase 2 K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tpz00630]
D Tph_c20260 glmE; methylaspartate mutase subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D Tph_c20280 mamA; methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D Tph_c20250 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D Tph_c19590 glcD2; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Tph_c10350 glcD1; glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Tph_c10360 glcF; putative glycolate oxidase iron-sulfur subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Tph_c05900 HAD superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Tph_c12980 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c12990 glnA4; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c08620 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c27490 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c27020 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c17200 gcvPA; putative glycine dehydrogenase decarboxylating-subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tph_c17190 gcvPB; putative glycine dehydrogenase decarboxylating-subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tph_c17220 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c19550 gcvH2; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D Tph_c19600 gcvH3; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein
D Tph_c17210 gcvH1; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D Tph_c21680 putative formate:NAD(P)+ oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c15400 fdhA1; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c15410 fdhA2; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c08060 nuoG2; NADH-quinone oxidoreductase subunit G 2 K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c18420 fdhA3; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c15390 fdxH; formate dehydrogenase iron-sulfur subunit FdxH K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Tph_c15380 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:tpz00640]
D Tph_c10090 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tph_c10080 pta; phosphate acetyltransferase Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c09600 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Tph_c13690 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Tph_c16370 accC; acetyl-CoA carboxylase biotin carboxylase subunit AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Tph_c13700 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Tph_c22330 putative aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00650 Butanoate metabolism [PATH:tpz00650]
D Tph_c04780 buk1; butyrate kinase 1 K00929 buk; butyrate kinase [EC:2.7.2.7]
D Tph_c04790 ptb; phosphate butyryltransferase Ptb K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Tph_c06970 adhE; aldehyde-alcohol dehydrogenase AdhE K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D Tph_c22330 putative aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Tph_c09600 pflB; formate acetyltransferase PflB K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Tph_c23870 korA1; 2-oxoglutarate synthase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c28900 korA2; 2-oxoglutarate synthase KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Tph_c23860 vorA1; ketoisovalerate oxidoreductase subunit VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c28890 vorA2; ketoisovalerate oxidoreductase VorA K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Tph_c19870 ilvB; acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tph_c19860 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tph_c19660 bdhA; (R,R)-butanediol dehydrogenase BdhA K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:tpz00660]
D Tph_c19870 ilvB; acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tph_c19860 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tph_c20250 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D Tph_c20260 glmE; methylaspartate mutase subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D Tph_c20280 mamA; methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D Tph_c23990 putative ribonuclease E inhibitor RraA/dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D Tph_c19830 leuC2; 3-isopropylmalate dehydratase large subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c09010 leuC1; 3-isopropylmalate dehydratase large subunit 1 K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c19820 leuD2; 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c09020 leuD1; 3-isopropylmalate dehydratase small subunit 2 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c19810 leuB2; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tpz00562]
D Tph_c20800 ino; inositol-3-phosphate synthase Ino K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D Tph_c20790 glucose-1-phosphate thymidylyl transferase K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34]
D Tph_c06760 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tpz00190]
D Tph_c04200 nuoE1; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tph_c18460 nuoE4; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tph_c14890 ndufv2; NADH dehydrogenase [ubiquinone] flavoprotein 2 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tph_c08040 nuoE2; NADH:quinone oxidoreductase 24 kDa subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tph_c08240 nuoE3; NADH-quinone oxidoreductase 24kDa subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Tph_c08050 nuoF2; NADH-quinone oxidoreductase 51 kDa subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tph_c18440 nuoF5; NADH-quinone oxidoreductase 51 kDa subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tph_c08250 nuoF3; NADH-quinone oxidoreductase 51 kDa subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tph_c04210 nuoF1; NADH-quinone oxidoreductase 51 kDa subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tph_c21670 nuoF6; NADH-quinone oxidoreductase 51 kDa subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tph_c14880 nuoF4; NADH-quinone oxidoreductase 51 kDa subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Tph_c14870 nuoG3; NADH-quinone oxidoreductase subunit G 2 K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D Tph_c04220 nuoG1; NADH-quinone oxidoreductase subunit G K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D Tph_c08260 2Fe-2S iron-sulfur cluster domain with dehydrogenase K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D Tph_c27390 atpA; ATP synthase F1 complex subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tph_c27370 atpD; ATP synthase F1 complex subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tph_c27380 atpG; ATP synthase F1 complex subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tph_c27400 atpH; ATP synthase F1 complex subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tph_c27360 atpE; ATP synthase F1complex subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tph_c27430 atpB; ATP synthase F0 complex subunit alpha K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tph_c27410 atpF; ATP synthase F0 complex subunit beta K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tph_c27420 atpC; ATP synthase F0 complex subunit gamma K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tph_c18680 ppaX; pyrophosphatase PpaX K06019 ppaX; pyrophosphatase PpaX [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:tpz00680]
D Tph_c21680 putative formate:NAD(P)+ oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c15400 fdhA1; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c15410 fdhA2; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c08060 nuoG2; NADH-quinone oxidoreductase subunit G 2 K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c18420 fdhA3; formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D Tph_c15390 fdxH; formate dehydrogenase iron-sulfur subunit FdxH K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D Tph_c15380 formate dehydrogenase gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D Tph_c15160 acsC; corrinoid/iron-sulfur protein large subunit AcsC K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245]
D Tph_c15140 acsD; corrinoid/iron-sulfur protein small subunit AcsD K00194 cdhD; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit delta [EC:2.1.1.245]
D Tph_c05730 cooS1; carbon monoxide dehydrogenase 1 K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Tph_c15180 acsB; carbon monoxide dehydrogenase/acetyl-CoA synthase subunit beta K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Tph_c08570 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tph_c05720 ygfS; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YgfS K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tph_c27490 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c27020 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c06780 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tph_c27830 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Tph_c05320 D-fructose 1,6-bisphosphatase class V K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tph_c22380 ftsZ2; cell division protein FtsZ K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D Tph_c15090 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Tph_c15470 CoB--CoM heterodisulfide reductase-like protein K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Tph_c15480 putative heterodisulfide reductase, C subunit K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6]
D Tph_c19580 CoB--CoM heterodisulfide reductase-like protein K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D Tph_c10090 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D Tph_c10080 pta; phosphate acetyltransferase Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tph_c06770 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tph_c00170 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tph_c26380 phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tph_c11710 gpmB; phosphoglycerate mutase GpmB K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tph_c03590 mtaB; methanol-cobalamin methyltransferase, subunit beta K04480 mtaB; methanol---5-hydroxybenzimidazolylcobamide Co-methyltransferase [EC:2.1.1.90]
D Tph_c20300 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D Tph_c20310 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D Tph_c06800 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D Tph_c05880 mttB2; trimethylamine methyltransferase MttB K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D Tph_c04470 mttB1; trimethylamine methyltransferase MttB K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D Tph_c27660 trimethylamine methyltransferase K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D Tph_c27690 mttB3; trimethylamine methyltransferase MttB K14083 mttB; trimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.250]
D Tph_c27700 mttC; trimethylamine corrinoid protein MttC K14084 mttC; trimethylamine corrinoid protein
D Tph_c27720 mtbB2; dimethylamine methyltransferase MtbB K16178 mtbB; dimethylamine---corrinoid protein Co-methyltransferase [EC:2.1.1.249]
D Tph_c04500 comB; putative 2-phosphosulfolactate phosphatase ComB K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:tpz00910]
D Tph_c24050 fumarate reductase, NapC/NirT cytochrome c subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D Tph_c01180 fumarate reductase, NapC/NirT cytochrome c subunit K15876 nrfH; cytochrome c nitrite reductase small subunit
D Tph_c08680 nifD1; nitrogenase molybdenum-iron protein alpha subunit K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Tph_c08690 nifK; nitrogenase molybdenum-iron protein beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Tph_c08650 nifH; nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D Tph_c13580 cooS; carbon monoxide dehydrogenase catalytic subunit CooS K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Tph_c09130 hcp; hydroxylamine reductase Hcp K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Tph_c12980 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c12990 glnA4; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c08620 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00920 Sulfur metabolism [PATH:tpz00920]
D Tph_c11330 phosphoesterase RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Tph_c01440 bthL; pyrogallol hydroxytransferase small subunit BthL K08358 ttrB; tetrathionate reductase subunit B
D Tph_c04920 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tph_c20890 cysK2; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tpz00061]
D Tph_c13690 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Tph_c16370 accC; acetyl-CoA carboxylase biotin carboxylase subunit AccC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Tph_c13700 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Tph_c10130 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein
D Tph_c13740 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tph_c13760 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Tph_c13720 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tph_c13730 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tph_c13710 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tph_c13750 fabK; enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Tph_c19080 lcfB; long-chain-fatty-acid--CoA ligase LcfB K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tpz00071]
D Tph_c19080 lcfB; long-chain-fatty-acid--CoA ligase LcfB K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tpz00561]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Tph_c10120 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tph_c08030 plsY1; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tph_c15590 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tph_c15700 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tph_c12950 mgtA; GDP-mannose-dependent alpha-mannosyltransferase MgtA K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Tph_c22650 ugtP; processive diacylglycerol glucosyltransferase UgtP K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
C 00564 Glycerophospholipid metabolism [PATH:tpz00564]
D Tph_c15580 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Tph_c08030 plsY1; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tph_c15590 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tph_c15700 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Tph_c06930 eutA; ethanolamine utilization protein EutA K04019 eutA; ethanolamine utilization protein EutA
D Tph_c06940 eutB; ethanolamine ammonia-lyase heavy chain K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D Tph_c06950 eutC; ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D Tph_c11210 cdsA; phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Tph_c18300 putative CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Tph_c09910 bchP; digeranylgeranylglycerophospholipid reductase BchP K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D Tph_c13170 lipolytic enzyme G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tpz00230]
D Tph_c16130 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Tph_c16070 deoB; phosphopentomutase DeoB K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tph_c28330 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Tph_c08470 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tph_c08510 purD; phosphoribosylamine--glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Tph_c08490 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tph_c08460 purL; phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Tph_c08440 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Tph_c08450 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tph_c08480 purM; phosphoribosylformylglycinamidine cyclo-ligase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Tph_c08420 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Tph_c07130 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Tph_c08430 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tph_c08500 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tph_c14920 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tph_c12800 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Tph_c08400 hpt; hypoxanthine-guanine phosphoribosyltransferase Hpt K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Tph_c11720 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tph_c26800 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tph_c04150 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Tph_c08410 guaA; GMP synthase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tph_c08740 glxB2; glutamine amidotransferase GlxB K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tph_c14340 gmk; guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Tph_c12770 nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tph_c05830 dgt; deoxyguanosinetriphosphate triphosphohydrolase Dgt K01129 dgt; dGTPase [EC:3.1.5.1]
D Tph_c12460 relA; GTP pyrophosphokinase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tph_c26950 aroB2; bifunctional 3-dehydroquinate synthase/phosphatase AroB K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Tph_c00890 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tph_c06090 ade; adenine deaminase Ade K01486 ade; adenine deaminase [EC:3.5.4.2]
D Tph_c11610 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Tph_c25650 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tph_c01220 putative nucleotide kinase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
C 00240 Pyrimidine metabolism [PATH:tpz00240]
D Tph_c14450 carb; carbamoyl-phosphate synthase large subunit CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tph_c14460 carA; carbamoyl-phosphate synthase small subunit CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tph_c14480 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Tph_c14470 pyrC; dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Tph_c14430 pyrD1; dihydroorotate dehydrogenase PyrD K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Tph_c14440 pyrK; dihydroorotate dehydrogenase electron transfer subunit PyrK K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Tph_c14410 pyrE; orotate phosphoribosyltransferase PyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Tph_c14420 pyrF; orotidine 5'-phosphate decarboxylase PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Tph_c11160 pyrH; uridylate kinase PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Tph_c26800 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tph_c05950 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Tph_c27870 pyrG; CTP synthase PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Tph_c15710 cmk; cytidylate kinase Cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Tph_c14920 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tph_c18650 upp; uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tph_c14490 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tph_c11610 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Tph_c16060 pdp; pyrimidine-nucleoside phosphorylase Pdp K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Tph_c22700 cdd; cytidine deaminase Cdd K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Tph_c12770 nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Tph_c27480 comEB; ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Tph_c28790 tmk; thymidylate kinase Tmk K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Tph_c04940 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Tph_c23940 pyrD2; dihydroorotate dehydrogenase PyrD K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Tph_c24020 pyrD3; dihydroorotate dehydrogenase PyrD K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Tph_c27050 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tpz00250]
D Tph_c26620 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Tph_c08630 asnB; asparagine synthetase 3 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tph_c04690 nit; omega-amidase Nit K13566 NIT2; omega-amidase [EC:3.5.1.3]
D Tph_c25430 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tph_c25420 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tph_c00890 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Tph_c08430 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Tph_c14480 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Tph_c22330 putative aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Tph_c12980 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c12990 glnA4; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c08620 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c14450 carb; carbamoyl-phosphate synthase large subunit CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Tph_c14460 carA; carbamoyl-phosphate synthase small subunit CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Tph_c08450 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tph_c19720 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tph_c08470 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:tpz00260]
D Tph_c15530 lysC; aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tph_c11450 asdB; aspartate-semialdehyde dehydrogenase AsdB K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tph_c15560 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tph_c15540 thrB; homoserine kinase ThrB K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Tph_c05870 aminoglycoside phosphotransferase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D Tph_c15550 thrC1; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tph_c27010 thrC2; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tph_c27490 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c27020 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c06770 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Tph_c00170 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tph_c26380 phosphoglycerate mutase K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tph_c11710 gpmB; phosphoglycerate mutase GpmB K22305 psp; phosphoserine phosphatase [EC:3.1.3.3]
D Tph_c17200 gcvPA; putative glycine dehydrogenase decarboxylating-subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tph_c17190 gcvPB; putative glycine dehydrogenase decarboxylating-subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tph_c17220 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c19550 gcvH2; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D Tph_c19600 gcvH3; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein
D Tph_c17210 gcvH1; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D Tph_c17140 sdaAA; putative L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tph_c17150 sdaAB; L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tph_c26490 trpA; tryptophan synthase alpha subunit TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tph_c26500 trpB; tryptophan synthase beta subunit TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tpz00270]
D Tph_c04920 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Tph_c20890 cysK2; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Tph_c20290 mttC14; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c03610 metH1; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05860 mttC13; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05890 metH2; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c06820 mtbC11; dimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c14310 metK; S-adenosylmethionine synthase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tph_c15490 speH; S-adenosylmethionine decarboxylase proenzyme SpeH K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Tph_c15030 speE2; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c09810 speE1; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c14600 putative spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c12800 multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Tph_c10210 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase MtaD K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Tph_c10180 mtaP; methylthioadenosine phosphorylase MtaP K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Tph_c10190 mtnA; methylthioribose-1-phosphate isomerase MtnA K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Tph_c17770 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D Tph_c08390 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tph_c15530 lysC; aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tph_c11450 asdB; aspartate-semialdehyde dehydrogenase AsdB K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tph_c15560 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tph_c18160 hypothetical protein DUF39 K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16]
D Tph_c18150 4Fe-4S ferredoxin iron-sulfur binding domain containing protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin
D Tph_c19890 ilvE1; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c20540 ilvE2; putative branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c17140 sdaAA; putative L-serine dehydratase alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tph_c17150 sdaAB; L-serine dehydratase beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Tph_c00170 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:tpz00280]
D Tph_c19890 ilvE1; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c20540 ilvE2; putative branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c04750 ldh; leucine dehydrogenase Ldh K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Tph_c22330 putative aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tpz00290]
D Tph_c19830 leuC2; 3-isopropylmalate dehydratase large subunit LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c09010 leuC1; 3-isopropylmalate dehydratase large subunit 1 K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c19820 leuD2; 3-isopropylmalate dehydratase small subunit LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c09020 leuD1; 3-isopropylmalate dehydratase small subunit 2 K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Tph_c19810 leuB2; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Tph_c19870 ilvB; acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tph_c19860 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tph_c19850 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tph_c19880 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tph_c19890 ilvE1; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c20540 ilvE2; putative branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c04750 ldh; leucine dehydrogenase Ldh K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D Tph_c19800 IPM/Hcit synthase-like protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Tph_c19840 leuA2; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tpz00300]
D Tph_c15560 hom; homoserine dehydrogenase Hom K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Tph_c15530 lysC; aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tph_c11450 asdB; aspartate-semialdehyde dehydrogenase AsdB K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tph_c11460 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tph_c11420 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Tph_c25450 argD2; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tph_c17030 peptidase ArgE/DapE family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tph_c14380 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tph_c14370 dapL; LL-diaminopimelate aminotransferase DapL K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Tph_c15940 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tph_c12590 murE1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tph_c12600 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tph_c27770 biotin synthase K16180 pylB; methylornithine synthase [EC:5.4.99.58]
D Tph_c24760 hypothetical protein K16181 pylC; 3-methylornithine--L-lysine ligase [EC:6.3.2.59]
D Tph_c24730 alanine dehydrogenase K16182 pylD; 3-methylornithyl-N6-L-lysine dehydrogenase [EC:1.4.1.-]
C 00310 Lysine degradation [PATH:tpz00310]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c13270 argD1; ornithine/acetylornithine aminotransferase ArgD K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Tph_c22330 putative aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:tpz00220]
D Tph_c25440 argF; ornithine carbamoyltransferase ArgF K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Tph_c25430 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tph_c25420 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tph_c08450 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tph_c12980 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c12990 glnA4; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c08620 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c25470 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Tph_c25460 argB2; acetylglutamate kinase ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Tph_c25480 argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Tph_c25450 argD2; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tpz00330]
D Tph_c28800 speA; arginine decarboxylase SpeA K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Tph_c22790 pdaD2; pyruvoyl-dependent arginine decarboxylase PdaD K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Tph_c09800 pdaD1; pyruvoyl-dependent arginine decarboxylase PdaD K02626 pdaD; arginine decarboxylase [EC:4.1.1.19]
D Tph_c09820 speB; agmatinase SpeB K01480 speB; agmatinase [EC:3.5.3.11]
D Tph_c15030 speE2; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c09810 speE1; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c14600 putative spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c15490 speH; S-adenosylmethionine decarboxylase proenzyme SpeH K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Tph_c13270 argD1; ornithine/acetylornithine aminotransferase ArgD K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Tph_c12850 proC; pyrroline-5-carboxylate reductase ProC K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Tph_c21560 prob; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tph_c21550 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Tph_c20320 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00340 Histidine metabolism [PATH:tpz00340]
D Tph_c08820 hisG; ATP phosphoribosyltransferase catalytic subunit HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Tph_c08810 hisZ; histidyl-tRNA ligase HisZ K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Tph_c08880 hisI; histidine biosynthesis bifunctional protein HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Tph_c08860 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Tph_c08850 hisH; imidazole glycerol phosphate synthase glutamine amidotransferase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Tph_c08870 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Tph_c08840 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Tph_c15020 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tph_c20810 hisK; histidinol-phosphatase HisK K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Tph_c09740 hisJ; histidinol phosphate phosphatase HisJ K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Tph_c08830 hisD; histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Tph_c20460 hutH; histidine ammonia-lyase HutH K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Tph_c20340 hutU; urocanate hydratase HutU K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Tph_c20450 hutI; imidazolonepropionase HutI K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D Tph_c20440 ftcd; formimidoyltransferase-cyclodeaminase Ftcd K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism
D Tph_c15020 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:tpz00360]
D Tph_c23800 paaK2; phenylacetate-coenzyme A ligase PaaK K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Tph_c12510 paaK1; phenylacetate-coenzyme A ligase PaaK K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Tph_c15020 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:tpz00380]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tpz00400]
D Tph_c09510 aroF1; phospho-2-dehydro-3-deoxyheptonate aldolase AroF K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tph_c15730 aroF2; phospho-2-dehydro-3-deoxyheptonate aldolase AroF K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tph_c26550 aroF3; phospho-2-dehydro-3-deoxyheptonate aldolase AroF K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tph_c26680 aroF4; phospho-2-dehydro-3-deoxyheptonate aldolase AroF K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Tph_c16670 aroB1; 3-dehydroquinate synthase AroB K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Tph_c16500 aroQ; 3-dehydroquinate dehydratase AroQ K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Tph_c16700 aroE; shikimate dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Tph_c16680 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Tph_c15720 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Tph_c16690 aroC; chorismate synthase AroC K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Tph_c26540 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tph_c26530 trpGD; trpGD: bifunctional anthranilate synthase, glutamine amidotransferase/anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D Tph_c26510 trpF; N-(5'-phosphoribosyl)anthranilate isomerase TrpF K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Tph_c26520 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Tph_c26490 trpA; tryptophan synthase alpha subunit TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Tph_c26500 trpB; tryptophan synthase beta subunit TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Tph_c15750 aroH; chorismate mutase AroH K06208 aroH; chorismate mutase [EC:5.4.99.5]
D Tph_c09520 tyrA; prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tph_c26690 pheA; P-protein PheA K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Tph_c15020 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tpz00410]
D Tph_c26700 panD; aspartate 1-decarboxylase PanD K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Tph_c22330 putative aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Tph_c26710 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Tph_c23940 pyrD2; dihydroorotate dehydrogenase PyrD K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Tph_c24020 pyrD3; dihydroorotate dehydrogenase PyrD K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Tph_c27050 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
C 00430 Taurine and hypotaurine metabolism [PATH:tpz00430]
D Tph_c10080 pta; phosphate acetyltransferase Pta K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Tph_c10090 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D Tph_c01320 beta-lactamase-like protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:tpz00450]
D Tph_c20290 mttC14; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c03610 metH1; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05860 mttC13; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05890 metH2; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c06820 mtbC11; dimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c20510 trxB; thioredoxin reductase TrxB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Tph_c00670 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Tph_c00430 selA; L-seryl-tRNA(Sec) selenium transferase SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Tph_c28730 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D Tph_c27490 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c27020 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tpz00470]
D Tph_c18560 alr1; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D Tph_c27850 alr2; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D Tph_c13150 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tph_c08450 purQ; phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Tph_c04130 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3]
D Tph_c12620 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tph_c14380 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Tph_c15940 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Tph_c20320 proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
C 00480 Glutathione metabolism [PATH:tpz00480]
D Tph_c15030 speE2; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c09810 speE1; spermidine synthase SpeE K00797 speE; spermidine synthase [EC:2.5.1.16]
D Tph_c14600 putative spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tpz00542]
D Tph_c02310 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tpz00541]
D Tph_c05330 gtaB; UTP--glucose-1-phosphate uridylyltransferase GtaB K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Tph_c03640 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Tph_c02690 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Tph_c02700 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D Tph_c29080 manC1; mannose-1-phosphate guanylyltransferase ManC K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Tph_c28340 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Tph_c27460 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tph_c08150 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase WecC K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:tpz00550]
D Tph_c12670 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tph_c28070 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tph_c12660 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tph_c12650 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tph_c12620 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tph_c12590 murE1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tph_c13150 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tph_c12600 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tph_c22710 dgkA; diacylglycerol kinase DgkA K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D Tph_c11200 uppS; undecaprenyl pyrophosphate synthase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tph_c09300 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tph_c12610 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tph_c12640 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tph_c11800 pbpF; penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tph_c06000 mrdA; penicillin-binding protein 2, peptidoglycan glycosyltransferase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tph_c12580 spoVD; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Tph_c14240 pbpA; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D Tph_c11390 dacF1; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c15870 dacF2; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c16050 dacF3; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c22250 murE2; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase MurE K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D Tph_c22240 glutamine amidotransferase, cobB/cobQ-like protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:tpz00552]
D Tph_c09300 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tph_c02310 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tph_c28170 tarA; N-acetylmannosaminyltransferase TarA K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Tph_c08130 lytR; transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Tph_c28180 msrR; regulatory protein MsrR K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Tph_c22650 ugtP; processive diacylglycerol glucosyltransferase UgtP K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D Tph_c12950 mgtA; GDP-mannose-dependent alpha-mannosyltransferase MgtA K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tpz00543]
D Tph_c02310 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tph_c02000 algI1; poly(beta-D-mannuronate) O-acetylase AlgI K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Tph_c03660 algI2; alginate O-acetylation protein AlgI K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Tph_c07760 icaA; poly-beta-1,6-N-acetyl-D-glucosamine synthase IcaA K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D Tph_c04920 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tpz00730]
D Tph_c17830 thiC1; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Tph_c17810 thiD; phosphomethylpyrimidine kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Tph_c17850 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D Tph_c19200 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c17300 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c17860 thiH; dehydroglycine synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Tph_c16260 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tph_c17870 thiG; thiazole synthase ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Tph_c17790 thiM; hydroxyethylthiazole kinase ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Tph_c17780 thiE1; thiamine-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Tph_c17840 thiE2; thiamine-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Tph_c01220 putative nucleotide kinase K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D Tph_c14220 rsgA; ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tph_c17760 thiN2; thiamine pyrophosphokinase ThiN K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Tph_c25650 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tpz00740]
D Tph_c14030 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tph_c14050 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tph_c14020 ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Tph_c14040 ribE; riboflavin synthase subunit alpha RibE K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Tph_c11350 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Tph_c17790 thiM; hydroxyethylthiazole kinase ThiM K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Tph_c16130 nudF; ADP-ribose pyrophosphatase NudF K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Tph_c15440 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tph_c23880 ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:tpz00750]
D Tph_c15550 thrC1; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tph_c27010 thrC2; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D Tph_c00140 pdxS; pyridoxal biosynthesis lyase PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Tph_c00150 pdxT; glutamine amidotransferase PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tpz00760]
D Tph_c26620 nadB; L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Tph_c26630 nadA; quinolinate synthase subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Tph_c26610 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Tph_c18040 pncB; nicotinate phosphoribosyltransferase PncB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Tph_c14920 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Tph_c21540 nadD; nicotinate-nucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Tph_c18130 nadE2; NH(3)-dependent NAD(+) synthetase NadE K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Tph_c29040 nadE3; NH(3)-dependent NAD(+) synthetase NadE K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Tph_c08610 nadE1; glutamine-dependent NAD+ synthetase NadE K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Tph_c13470 sir2; NAD-dependent histone deacetylase silent information regulator Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Tph_c21650 ppnK2; inorganic polyphosphate/ATP-NAD kinase PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Tph_c16240 ppnK1; inorganic polyphosphate/ATP-NAD kinase PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D Tph_c27740 pntAA1; NAD(P) transhydrogenase subunit alpha, part 2 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Tph_c27750 pntAA2; NAD(P) transhydrogenase subunit alpha, part 1 K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Tph_c27790 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:tpz00770]
D Tph_c19870 ilvB; acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Tph_c19860 ilvH; acetolactate synthase small subunit IlvH K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Tph_c19850 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Tph_c19880 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Tph_c26720 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Tph_c26710 panC; pantothenate synthetase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Tph_c26590 coaX; type III pantothenate kinase CoaX K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Tph_c14320 coaBC; coenzyme A biosynthesis bifunctional protein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Tph_c10050 coaD; phosphopantetheine adenylyltransferase CoaD K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Tph_c18060 coaE; dephospho-CoA kinase CoaE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Tph_c18580 acpS; holo-[acyl-carrier-protein] synthase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Tph_c19890 ilvE1; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c20540 ilvE2; putative branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c23940 pyrD2; dihydroorotate dehydrogenase PyrD K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Tph_c24020 pyrD3; dihydroorotate dehydrogenase PyrD K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Tph_c27050 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Tph_c26700 panD; aspartate 1-decarboxylase PanD K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:tpz00780]
D Tph_c13720 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tph_c13730 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tph_c13710 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tph_c01230 radical SAM domain-containing protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Tph_c26600 birA; biotin--acetyl-CoA-carboxylase ligase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tpz00785]
D Tph_c19520 aldolase-like protein K09711 lipS1; lipoyl synthase
D Tph_c19530 radical SAM domain-containing protein K24689 lipS2; lipoyl synthase
D Tph_c19490 lplA2; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Tph_c19540 biotin/lipoate A/B protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Tph_c19560 biotin/lipoate A/B protein ligase-like protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Tph_c17170 lplA1; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c19620 acoC; dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Tph_c17200 gcvPA; putative glycine dehydrogenase decarboxylating-subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Tph_c17190 gcvPB; putative glycine dehydrogenase decarboxylating-subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Tph_c17220 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tph_c19550 gcvH2; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D Tph_c19600 gcvH3; glycine cleavage system H protein 2 K02437 gcvH; glycine cleavage system H protein
D Tph_c17210 gcvH1; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tpz00790]
D Tph_c14930 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Tph_c26750 folB; dihydroneopterin aldolase FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Tph_c26740 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Tph_c26760 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Tph_c05920 folC; folylpolyglutamate synthase FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Tph_c14030 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Tph_c20560 pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D Tph_c20550 pabB; para-aminobenzoate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Tph_c18380 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tph_c22580 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Tph_c01580 moaA1; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Tph_c08330 moaA2; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Tph_c01630 moaC1; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Tph_c08340 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Tph_c01510 moeA1; molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Tph_c01770 moeA2; molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Tph_c08310 moeA3; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Tph_c08320 moeA4; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Tph_c27310 moeA5; molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Tph_c01480 mobA1; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D Tph_c01750 mobA2; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
D Tph_c15670 mobA3; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tpz00670]
D Tph_c08280 fhs1; formate--tetrahydrofolate ligase Fhs K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Tph_c26780 fhs2; formate-tetrahydrofolate ligase Fhs K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Tph_c16310 folD1; methylenetetrahydrofolate dehydrogenase (NADP(+))/cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Tph_c16320 folD2; methylenetetrahydrofolate dehydrogenase (NADP(+))/cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Tph_c20430 fcha; methenyltetrahydrofolate cyclohydrolase Fcha K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D Tph_c27490 glyA2; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c27020 glyA1; serine hydroxymethyltransferase GlyA K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Tph_c08490 purN; phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Tph_c08500 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tph_c20440 ftcd; formimidoyltransferase-cyclodeaminase Ftcd K00603 fctD; glutamate formiminotransferase / 5-formyltetrahydrofolate cyclo-ligase [EC:2.1.2.5 6.3.3.2]
D Tph_c14280 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tph_c17220 gcvT; glycine cleavage system aminomethyltransferase T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Tph_c20290 mttC14; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c03610 metH1; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05860 mttC13; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05890 metH2; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c06820 mtbC11; dimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c01810 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase K25915 mtvA; [methyl-Co(III) methoxylated-aromatic-compound-specific corrinoid protein]---tetrahydrofolate methyltransferase [EC:2.1.1.385]
D Tph_c04940 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Tph_c15100 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tpz00860]
D Tph_c15340 hemA; glutamyl-tRNA reductase HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Tph_c15270 hemL; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Tph_c15300 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Tph_c15330 hemC; porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Tph_c15320 hemD; porphyrin biosynthesis protein HemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Tph_c15350 cysG; siroheme synthase CysG K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Tph_c15310 pqqE1; coenzyme PQQ synthesis protein E K22226 ahbC; Fe-coproporphyrin III synthase
D Tph_c05240 cbiL; precorrin-2 C20-methyltransferase CbiL K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Tph_c05270 cbiH; cobalt-precorrin-3B C(17)-methyltransferase CbiH K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D Tph_c05250 cbiF; cobalt-precorrin-4 C(11)-methyltransferase CbiF K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Tph_c05260 cbiG; cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Tph_c05280 cbiJ; cobalt-precorrin-6x reductase CbiJ K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Tph_c05220 cbiD; cobalt-precorrin-6A synthase CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Tph_c05230 cbiT; cobalt-precorrin-6Y C(15)-methyltransferase CbiT K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D Tph_c05290 cobH; precorrin-8X methylmutase CobH K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Tph_c08600 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Tph_c03440 cobN; cobalt insertion protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D Tph_c15790 cobO2; Cob(I)yrinic acid a,c-diamide adenosyltransferase CobO K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Tph_c03480 cobO1; cob(I)yrinic acid a,c-diamide adenosyltransferase CobO K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Tph_c05300 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Tph_c05140 cobD1; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Tph_c03470 cbiZ; adenosylcobinamide amidohydrolase CbiZ K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90]
D Tph_c11690 cobU; cobinamide kinase/cobinamide phosphate guanylyltransferase CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Tph_c11700 cobS; cobalamin-5-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Tph_c22280 thiC3; phosphomethylpyrimidine synthase ThiC K22465 bzaA_B; 5-hydroxybenzimidazole synthase [EC:4.1.99.23]
D Tph_c22270 thiC2; phosphomethylpyrimidine synthase ThiC K22465 bzaA_B; 5-hydroxybenzimidazole synthase [EC:4.1.99.23]
D Tph_c05610 O-methyltransferase-like protein K25497 bzaC; 5-hydroxybenzimidazole methyltransferase [EC:2.1.1.-]
D Tph_c05620 methylthiotransferase K25498 bzaD; 5-methoxybenzimidazole methyltransferase
D Tph_c05630 methylthiotransferase K25499 bzaE; 5-methoxy-6-methylbenzimidazole methyltransferase
D Tph_c12430 cobT2; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Tph_c05600 cobT1; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Tph_c05150 pduX; putative propanediol utilization protein PduX K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D Tph_c05160 cobD2; threonine-phosphate decarboxylase CobD K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Tph_c06990 cobalamin adenosyltransferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D Tph_c17350 bchD; magnesium chelatase 67 kDa subunit BchD K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Tph_c03400 hypothetical protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D Tph_c18900 bchI2; magnesium-chelatase BchI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Tph_c17340 bchI1; magnesium chelatase 38 kDa subunit BchI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Tph_c03390 putative magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tpz00130]
D Tph_c22310 ubiA2; 4-hydroxybenzoate nonaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Tph_c15450 ubiD1; 3-octaprenyl-4-hydroxybenzoate carboxylyase UbiD K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Tph_c15440 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tph_c23880 ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tph_c13230 NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tpz00900]
D Tph_c16260 dxs; 1-deoxy-D-xylulose-5-phosphate synthase Dxs K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Tph_c11230 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Tph_c03860 ispDF; bifunctional enzyme IspD/IspF K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D Tph_c28380 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Tph_c11250 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Tph_c15440 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tph_c23880 ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tph_c23830 fni; isopentenyl-diphosphate delta-isomerase Fni K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D Tph_c16280 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Tph_c15430 hepT2; heptaprenyl diphosphate synthase component 2 K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D Tph_c11200 uppS; undecaprenyl pyrophosphate synthase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Tph_c06510 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Tph_c06520 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Tph_c24840 putative beta-lactamase-like protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:tpz00332]
D Tph_c21560 prob; glutamate 5-kinase ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Tph_c21550 proA; gamma-glutamyl phosphate reductase ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tpz00261]
D Tph_c15530 lysC; aspartokinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Tph_c11450 asdB; aspartate-semialdehyde dehydrogenase AsdB K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Tph_c11460 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Tph_c11420 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tpz00521]
D Tph_c06680 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2]
D Tph_c29090 manB; phosphomannomutase/phosphoglucomutase ManB K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Tph_c20800 ino; inositol-3-phosphate synthase Ino K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Tph_c06680 glkA; glucokinase GlkA K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:tpz00401]
D Tph_c09520 tyrA; prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Tph_c15020 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Tph_c26540 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Tph_c13740 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tph_c13730 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Tph_c10130 acpP; acyl carrier protein AcpP K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tpz00999]
D Tph_c14310 metK; S-adenosylmethionine synthase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Tph_c16700 aroE; shikimate dehydrogenase AroE K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tpz00362]
D Tph_c23990 putative ribonuclease E inhibitor RraA/dimethylmenaquinone methyltransferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
C 00627 Aminobenzoate degradation [PATH:tpz00627]
D Tph_c15440 putative aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tph_c23880 ubiX; 3-polyprenyl-4-hydroxybenzoate decarboxylase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Tph_c09100 uroporphyrinogen decarboxylase K25916 mtvB; methoxylated aromatic compound---corrinoid protein Co-methyltransferase [EC:2.1.1.382]
D Tph_c06620 hypothetical protein K22960 lpdD; gallate decarboxylase subunit D
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tpz00625]
D Tph_c21630 aldA; aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Tph_c08690 nifK; nitrogenase molybdenum-iron protein beta subunit K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Tph_c08650 nifH; nitrogenase iron protein NifH K02588 nifH; nitrogenase iron protein NifH
D Tph_c08680 nifD1; nitrogenase molybdenum-iron protein alpha subunit K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:tpz00633]
D Tph_c06360 periplasmic [NiFeSe] hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Tph_c06350 periplasmic [NiFeSe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Tph_c05730 cooS1; carbon monoxide dehydrogenase 1 K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Tph_c15180 acsB; carbon monoxide dehydrogenase/acetyl-CoA synthase subunit beta K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D Tph_c08570 4Fe-4S ferredoxin K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D Tph_c05720 ygfS; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YgfS K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tpz03020]
D Tph_c25930 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tph_c25920 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tph_c25570 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tph_c14330 DNA-directed RNA polymerase, subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tpz03010]
D Tph_c11140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Tph_c25790 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Tph_c25580 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Tph_c25680 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Tph_c00700 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Tph_c25890 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Tph_c25710 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Tph_c25530 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Tph_c25860 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Tph_c25590 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Tph_c25900 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Tph_c25600 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Tph_c25720 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D Tph_c11360 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Tph_c10230 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Tph_c25760 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Tph_c00720 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Tph_c25810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Tph_c21240 s20: ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Tph_c22780 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Tph_c26070 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Tph_c25820 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Tph_c25850 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Tph_c25840 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Tph_c25730 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Tph_c25700 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Tph_c26050 l12: ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Tph_c00780 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Tph_c26060 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Tph_c26080 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Tph_c25540 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Tph_c25750 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Tph_c25670 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Tph_c25780 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Tph_c25560 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Tph_c25690 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Tph_c10270 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Tph_c13330 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Tph_c21600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Tph_c25800 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Tph_c25830 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Tph_c25740 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Tph_c28310 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Tph_c21580 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Tph_c14000 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Tph_c25770 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Tph_c27580 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Tph_c10110 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Tph_c26110 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Tph_c13320 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Tph_c25610 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Tph_c25910 ribosomal protein HS6-type K07590 RP-L7A; large subunit ribosomal protein L7A
D Tph_c13950 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c26170 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c18250 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c13940 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c26140 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c18240 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c13930 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tph_c26130 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tph_c18230 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tpz00970]
D Tph_c13210 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tph_c21400 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tph_c26150 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tph_c29020 trnR5; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c00200 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c14990 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c00220 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c04290 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c24720 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tph_c26120 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tph_c09840 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tph_c09870 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tph_c23700 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tph_c17620 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tph_c26840 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tph_c17610 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tph_c01930 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tph_c09860 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tph_c04280 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tph_c23710 trnH; tRNA-His K14226 tRNA-His; tRNA His
D Tph_c26160 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tph_c04620 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c18010 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c11820 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c15230 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c09880 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c23690 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tph_c00900 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tph_c24710 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c26850 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c26860 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c05000 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c09850 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tph_c09320 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tph_c15520 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tph_c04270 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tph_c00190 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c29030 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c29060 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c00210 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c05010 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c21980 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c04980 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c22080 trnT4; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c13100 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tph_c04990 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tph_c14820 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D Tph_c09830 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D Tph_c24700 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D Tph_c00510 trnU; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Tph_c17650 gltX; glutamyl-tRNA synthetase GltX K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tph_c08970 gatA; glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tph_c08980 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tph_c08960 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tph_c16940 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tph_c12500 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tph_c05760 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tph_c05770 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tph_c09950 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tph_c00180 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tph_c00430 selA; L-seryl-tRNA(Sec) selenium transferase SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Tph_c04930 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tph_c28730 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tph_c14280 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Tph_c04910 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tph_c21390 leuS; leucyl-tRNA ligase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tph_c12900 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tph_c26180 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tph_c27890 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tph_c11260 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tph_c12490 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tph_c13350 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tph_c13360 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tph_c18270 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tph_c15920 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tpz03060]
D Tph_c25660 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D Tph_c26100 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D Tph_c06790 secG; preprotein translocase SecG K03075 secG; preprotein translocase subunit SecG
D Tph_c12410 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D Tph_c12420 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D Tph_c00270 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tph_c06470 secA; protein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tph_c10220 ffh; signal recognition particle GTPase Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tph_c10170 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tph_c21300 putative bacterial sec-independent translocation protein K03116 tatA; sec-independent protein translocase protein TatA
D Tph_c18180 tatA; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D Tph_c15420 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Tph_c10280 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tph_c12960 lspA; lipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Tph_c21440 signal peptidase S26B K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tpz04122]
D Tph_c19200 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c17300 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c19230 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tph_c17290 trmU; tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase TrmU K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tph_c01580 moaA1; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Tph_c08330 moaA2; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Tph_c04190 moaD1; archael molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D Tph_c19470 putative MoaD-like protein K03636 moaD; sulfur-carrier protein
D Tph_c08230 moaD2; molybdopterin converting factor, small subunit MoaD K03636 moaD; sulfur-carrier protein
D Tph_c01630 moaC1; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Tph_c08340 moaC2; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Tph_c17880 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D Tph_c17850 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:tpz03018]
D Tph_c06780 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tph_c11370 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tph_c07140 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tph_c27810 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tph_c11590 cvfA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CvfA K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Tph_c11470 rnjA; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tph_c06110 beta-lactamase domain-containing protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tph_c21110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tph_c04000 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c08370 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c13840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tpz03030]
D Tph_c09340 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tph_c29010 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tph_c28780 holB; DNA polymerase iii, delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tph_c21250 holA; DNA polymerase III, subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tph_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tph_c00800 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tph_c05840 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tph_c00710 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D Tph_c24630 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Tph_c10300 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tph_c18090 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tph_c08910 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tpz03410]
D Tph_c18730 pdg; ultraviolet N-glycosylase/AP lyase Pdg K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tph_c18080 mutM; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Tph_c10020 udgA; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tph_c22340 nfo; apurinic endonuclease Nfo K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Tph_c18090 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tph_c13250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tph_c08910 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tpz03420]
D Tph_c28270 mfd; transcription-repair-coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tph_c06640 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D Tph_c06630 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D Tph_c06650 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Tph_c08890 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tph_c18090 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tph_c08910 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tpz03430]
D Tph_c13890 mutS2; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Tph_c13440 mutS1; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D Tph_c13860 mutL1; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Tph_c08890 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tph_c16300 xseA2; exodeoxyribonuclease VII large subunit XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tph_c16290 xseA1; exodeoxyribonuclease VII small subunit XseA K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tph_c13250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tph_c00710 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D Tph_c09340 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tph_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tph_c29010 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tph_c21250 holA; DNA polymerase III, subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tph_c28780 holB; DNA polymerase iii, delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tph_c08910 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tph_c04820 dam1; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07190 D12 class n6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07930 dam2; adenine-specific DNA methyltransferase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:tpz03440]
D Tph_c13250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tph_c00710 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D Tph_c00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Tph_c05740 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Tph_c28990 recR; recombination protein RecR K06187 recR; recombination protein RecR
D Tph_c11580 recA; protein RecA K03553 recA; recombination protein RecA
D Tph_c18090 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tph_c12300 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tph_c12310 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tph_c12290 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tph_c09980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tph_c09340 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tph_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tph_c29010 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tph_c21250 holA; DNA polymerase III, subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tph_c28780 holB; DNA polymerase iii, delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tph_c14300 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:tpz03450]
D Tph_c10700 ATP-dependet DANN helicase Ku type K10979 ku; DNA end-binding protein Ku
D Tph_c09930 ligD2; ATP dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Tph_c08080 ligD1; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tpz02010]
D Tph_c03980 tupB; ABC-type tungstate transport system, permease component TupB K05772 tupA; tungstate transport system substrate-binding protein
D Tph_c27340 putative phosphate ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D Tph_c27330 pstB2; phosphate import ATP-binding protein PstB K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Tph_c26400 modA2; molybdate/tungstate ABC transport system substrate binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D Tph_c01600 modA1; molybdate ABC transporter, periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D Tph_c26410 modB; molybdate/tungstate ABC transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D Tph_c23560 putative ABC-type transporter K02018 modB; molybdate transport system permease protein
D Tph_c01610 wtpB; molybdate/tungstate transport system permease protein WtpB K02018 modB; molybdate transport system permease protein
D Tph_c26420 modC; molybdate/tungstate ABC transport system ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Tph_c01620 wtpC; molybdate/tungstate import ATP-binding protein WtpC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Tph_c20170 opuCC; glycine betaine/carnitine/choline-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D Tph_c20380 ABC-type glycine betaine transport system, substrate-binding domain protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D Tph_c20160 hypothetical protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20390 opuBB; choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20410 opuCB2; glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20190 opuCB1; glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20400 opuCA2; glycine betaine/carnitine/choline transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Tph_c20180 opuCA1; glycine betaine/carnitine/choline transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Tph_c04830 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D Tph_c04880 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D Tph_c04890 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D Tph_c04860 pstB1; phosphate ABC transporter, ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tph_c22100 glnH; glutamine-binding periplasmic protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D Tph_c22110 glnP; glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein
D Tph_c22120 glnQ; glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Tph_c23730 leu/ile/val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tph_c00450 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein BraC K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tph_c23740 braD2; high-affinity branched-chain amino acid transport system permease protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D Tph_c00460 braD1; high-affinity branched-chain amino acid transport system permease protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D Tph_c23750 branched chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D Tph_c00470 ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D Tph_c23760 livG2; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tph_c00480 livG1; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tph_c00490 braG; high-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tph_c22620 tpn32; lipoprotein TpN32 K02073 metQ; D-methionine transport system substrate-binding protein
D Tph_c22630 metI; putative D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D Tph_c22640 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D Tph_c22420 adcA; zinc transport system zinc-binding lipoprotein AdcA K09815 znuA; zinc transport system substrate-binding protein
D Tph_c22400 ABC-3 familiy transport protein K09816 znuB; zinc transport system permease protein
D Tph_c22410 zurA; zinc uptake system ATP-binding protein ZurA K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Tph_c09460 putative membrane protein K02009 cbiN; cobalt/nickel transport protein
D Tph_c05190 cbiN; cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D Tph_c05180 cbiM1; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Tph_c09470 cbiM2; cobalamin (vitamin B12) biosynthesis CbiM protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Tph_c05200 cbiQ2; cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tph_c09780 cbiQ3; cobalt ABC transport system permease CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tph_c05210 cbiO1; cobalt ABC transporter, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tph_c09790 cbiO2; cobalt ABC transport system ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tph_c21010 bioY; protein BioY K03523 bioY; biotin transport system substrate-specific component
D Tph_c21030 cobalt transport protein K16783 bioN; biotin transport system permease protein
D Tph_c21020 cbiO3; cobalt import ATP-binding protein CbiO K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D Tph_c03240 cbiQ1; ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Tph_c04370 cbiQ4; ABC-type cobalt import system, permease component K16785 ecfT; energy-coupling factor transport system permease protein
D Tph_c06540 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Tph_c06530 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Tph_c27180 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D Tph_c10690 ABC transport system permease protein K16919 ytrC_D; acetoin utilization transport system permease protein
D Tph_c10680 ABC transport system ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D Tph_c19120 yfiB; ABC transporter ATP-binding protein YfiB K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tph_c19110 ABC transporter-like protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:tpz03070]
D Tph_c16620 pilA; fimbrial protein PilA K02456 gspG; general secretion pathway protein G
D Tph_c12410 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D Tph_c12420 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D Tph_c26100 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D Tph_c06790 secG; preprotein translocase SecG K03075 secG; preprotein translocase subunit SecG
D Tph_c25660 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D Tph_c00270 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tph_c06470 secA; protein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tph_c10170 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tph_c10220 ffh; signal recognition particle GTPase Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tph_c21300 putative bacterial sec-independent translocation protein K03116 tatA; sec-independent protein translocase protein TatA
D Tph_c18180 tatA; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D Tph_c15420 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D Tph_c07610 TRAG-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tpz02020]
D Tph_c04850 phoR2; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tph_c04840 phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Tph_c04830 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D Tph_c23640 cssS; sensor histidine kinase CssS K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Tph_c23630 cssR; transcriptional regulatory protein CssR K07770 cssR; two-component system, OmpR family, response regulator CssR
D Tph_c21290 degP; serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D Tph_c03120 fla; flagellin K02406 fliC; flagellin
D Tph_c11100 fliA; RNA polymerase flagellar operon sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D Tph_c05350 putative flagellar motor component MotA K02556 motA; chemotaxis protein MotA
D Tph_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tph_c16200 spo0A; stage 0 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Tph_c13240 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tph_c27610 ytsJ; NAD-dependent malic enzyme 4 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Tph_c12340 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c14700 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c17400 argB1; accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c21500 transcriptional regulatory protein, luxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tph_c05710 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D Tph_c05410 degS; sensor protein DegS K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Tph_c05440 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D Tph_c07300 CpaB-like pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D Tph_c05480 cpaB; pilus assembly protein, Flp-type K02279 cpaB; pilus assembly protein CpaB
D Tph_c05490 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Tph_c07320 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Tph_c05500 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Tph_c05510 type II secretion system protein F K12510 tadB; tight adherence protein B
D Tph_c05520 tadC; putative pilus assembly protein TadC K12511 tadC; tight adherence protein C
D Tph_c08760 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Tph_c12980 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c12990 glnA4; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c08620 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c23520 hypothetical protein K07803 zraP; zinc resistance-associated protein
D Tph_c06730 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Tph_c06350 periplasmic [NiFeSe] hydrogenase small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Tph_c06360 periplasmic [NiFeSe] hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Tph_c06370 [Ni/Fe] hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Tph_c15260 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tph_c02100 tlpB; methyl-accepting chemotaxis protein TlpB K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c02930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c05110 putative chemotaxis methyl-accepting receptor K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c05130 tlpA; methyl-accepting chemotaxis protein TlpA K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c09690 tlpC; methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c18600 cheW2; chemotaxis protein Chew K03408 cheW; purine-binding chemotaxis protein CheW
D Tph_c05040 cheW1; chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D Tph_c05090 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c11070 cheA2; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c05080 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c05120 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c10960 cheY2; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c05050 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c11060 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c23900 dctM; TRAP transporter, DctM subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Tph_c01440 bthL; pyrogallol hydroxytransferase small subunit BthL K08358 ttrB; tetrathionate reductase subunit B
D Tph_c29170 fnr; anaerobic regulatory protein Fnr K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tph_c20610 response regulatory protein K07720 yesN; two-component system, response regulator YesN
D Tph_c03630 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Tph_c27460 wecB; UDP-N-acetylglucosamine 2-epimerase WecB K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Tph_c05650 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tpz02024]
D Tph_c13840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D Tph_c26540 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Tph_c23730 leu/ile/val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tph_c00450 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein BraC K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tph_c23740 braD2; high-affinity branched-chain amino acid transport system permease protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D Tph_c00460 braD1; high-affinity branched-chain amino acid transport system permease protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D Tph_c23750 branched chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D Tph_c00470 ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D Tph_c23760 livG2; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tph_c00480 livG1; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tph_c00490 braG; high-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tph_c07230 S-layer/PKD domain-containing protein K20276 bapA; large repetitive protein
D Tph_c19080 lcfB; long-chain-fatty-acid--CoA ligase LcfB K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tph_c29170 fnr; anaerobic regulatory protein Fnr K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tph_c14050 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Tph_c26940 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Tph_c12340 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c14700 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c17400 argB1; accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c24950 gsiB2; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25000 xp55: protein XP55 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25100 copper amine oxidase-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25190 hbpA; heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25270 appA2; oligopeptide-binding protein AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c17110 ddpA; D,D-dipeptide ABC transport system substrate binding protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c03520 appA1; oligopeptide-binding protein AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c17920 gsiB1; glutathione ABC transport system substrate protein GsiD K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c18030 dppE; dipeptide-binding protein DppE K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c24990 appB; oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c25030 putative peptide permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c25340 nikB; nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c17100 ddpB; D,D-dipeptide ABC transport system permease protein DdpB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c03530 gsiC1; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c17930 gsiC2; glutathione ABC transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c25020 dppC2; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c25330 nikC; nickel transport system permease protein NikC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c03540 gsiD1; glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c17090 dppC1; D,D-dipeptide ABC transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c17940 gsiD2; glutathione ABC transport system permease protein GsiA K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c24980 appC; oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c25150 oppD1; oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c25300 oppD2; oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c17080 dppD; D,D-dipeptide ABC transport system ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c03550 oligopeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c17950 gsiA; glutathione ABC transport system ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c03560 oligopeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tph_c25290 appF; oligopeptide transport ATP-binding protein AppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tph_c00270 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tph_c26100 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D Tph_c06790 secG; preprotein translocase SecG K03075 secG; preprotein translocase subunit SecG
D Tph_c25660 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D Tph_c06470 secA; protein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tph_c10170 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tph_c10220 ffh; signal recognition particle GTPase Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tph_c16200 spo0A; stage 0 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:tpz02030]
D Tph_c02100 tlpB; methyl-accepting chemotaxis protein TlpB K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c02930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c05110 putative chemotaxis methyl-accepting receptor K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c05130 tlpA; methyl-accepting chemotaxis protein TlpA K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c09690 tlpC; methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c05090 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c11070 cheA2; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c18600 cheW2; chemotaxis protein Chew K03408 cheW; purine-binding chemotaxis protein CheW
D Tph_c05040 cheW1; chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D Tph_c05080 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c05120 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c10960 cheY2; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c11080 cheC; inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Tph_c05050 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c11060 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c11090 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tph_c15260 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tph_c10830 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tph_c10940 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tph_c10950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tph_c05350 putative flagellar motor component MotA K02556 motA; chemotaxis protein MotA
D Tph_c05340 motB; putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:tpz02040]
D Tph_c10810 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tph_c10820 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tph_c10830 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tph_c10840 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tph_c10850 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tph_c10860 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Tph_c10880 fliK; flagellar hook-length control protein Flik K02414 fliK; flagellar hook-length control protein FliK
D Tph_c10930 fliL; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D Tph_c10940 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tph_c10950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tph_c10970 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tph_c10980 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tph_c10990 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tph_c11000 fliR; flagellar biosynthetic protein FiR K02421 fliR; flagellar biosynthesis protein FliR
D Tph_c11020 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tph_c11010 flhB2; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tph_c10790 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tph_c10800 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tph_c10890 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tph_c10910 flgE; flagellar hook-basal protein FlgE K02390 flgE; flagellar hook protein FlgE
D Tph_c27120 flgG2; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D Tph_c27110 flgG1; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tph_c27100 flgJ; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tph_c05670 flgK; flagellar hook protein 1 K02396 flgK; flagellar hook-associated protein 1
D Tph_c05690 flgL; flagellar hook protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tph_c03120 fla; flagellin K02406 fliC; flagellin
D Tph_c22170 fliD; flagellar hook protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D Tph_c22190 flagellar hook 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D Tph_c22150 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tph_c05350 putative flagellar motor component MotA K02556 motA; chemotaxis protein MotA
D Tph_c05340 motB; putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D Tph_c05650 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tph_c05850 rpoD1; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Tph_c06730 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Tph_c11100 fliA; RNA polymerase flagellar operon sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Tph_c06780 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Tph_c20290 mttC14; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c03610 metH1; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05860 mttC13; trimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c05890 metH2; methionine synthase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Tph_c06820 mtbC11; dimethylamine corrinoid protein 1 K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:tpz01501]
D Tph_c24840 putative beta-lactamase-like protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Tph_c11800 pbpF; penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tph_c06000 mrdA; penicillin-binding protein 2, peptidoglycan glycosyltransferase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tpz01502]
D Tph_c13150 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tph_c18560 alr1; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D Tph_c27850 alr2; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D Tph_c12600 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Tph_c12610 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tph_c12640 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tpz01503]
D Tph_c04100 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c25520 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c06390 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c21290 degP; serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tpz01000]
C 01001 Protein kinases [BR:tpz01001]
D Tph_c25410 sps2; putative serine/threonine-protein kinase Sps K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Tph_c14230 sps1; serine/threonine-protein kinase Sps K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Tph_c02650 yveL; tyrosine-protein kinase YveL K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Tph_c04850 phoR2; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tph_c23640 cssS; sensor histidine kinase CssS K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Tph_c05410 degS; sensor protein DegS K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Tph_c08190 atoS; signal transduction histidine-protein kinase AtoS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Tph_c05090 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c11070 cheA2; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c06910 pdtaS; sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tpz01009]
D Tph_c08390 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 01002 Peptidases and inhibitors [BR:tpz01002]
D Tph_c12960 lspA; lipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Tph_c07290 A24A-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tph_c16540 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tph_c05450 putative prepilin type 4 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Tph_c10010 gpr; germination protease Gpr K06012 gpr; spore protease [EC:3.4.24.78]
D Tph_c26900 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Tph_c22670 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Tph_c26370 hycI; hydrogenase 3 maturation protease HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D Tph_c12710 spoIIGA: sporulation sigma-E factor-processing peptidase K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D Tph_c08410 guaA; GMP synthase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tph_c08740 glxB2; glutamine amidotransferase GlxB K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Tph_c11650 lytF; endopeptidase LytF K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D Tph_c08470 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Tph_c19720 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Tph_c08630 asnB; asparagine synthetase 3 K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Tph_c17680 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D Tph_c12340 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c14700 accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c17400 argB1; accessory gene regulator B K07813 agrB; accessory gene regulator B
D Tph_c09220 abortive infection protein K07052 K07052; CAAX protease family protein
D Tph_c18890 CAAX amino terminal-like protease K07052 K07052; CAAX protease family protein
D Tph_c11630 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Tph_c17030 peptidase ArgE/DapE family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D Tph_c16150 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Tph_c25640 map; methionine aminopeptidase Map K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Tph_c16490 creatinase/prolidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Tph_c12530 peptidase M28 K19701 ywaD; aminopeptidase YwaD [EC:3.4.11.6 3.4.11.10]
D Tph_c04700 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Tph_c26810 ftsH2; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tph_c11550 ftsH1; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tph_c03920 htpX; prenyl protease 1 K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Tph_c11240 rasP; RIP metalloprotease RasP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Tph_c21290 degP; serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D Tph_c11390 dacF1; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c15870 dacF2; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c16050 dacF3; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c23150 clpP2; peptidase S14 ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Tph_c04640 clpP1; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Tph_c21990 putative ATP-dependent Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Tph_c00790 lon2; Lon protease 2 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Tph_c04670 lonA; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Tph_c04660 lonB; sporulation protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D Tph_c13670 lexA2; LexA repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tph_c11850 lexA1; LexA repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tph_c10280 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Tph_c21440 signal peptidase S26B K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D Tph_c06580 ctpA; processing protease CtpA K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Tph_c03940 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D Tph_c28400 cphB; cyanophycinase CphB K13282 cphB; cyanophycinase [EC:3.4.15.6]
D Tph_c17370 rhomboid domain containing peptidase K07059 K07059; rhomboid family protein
D Tph_c16210 spoIVB; spoIVB sporulation stage IV peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D Tph_c10750 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Tph_c22320 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Tph_c13430 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Tph_c16510 PmbA/TldD protein K03592 pmbA; PmbA protein
D Tph_c16520 PmbA/TldD protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:tpz01003]
D Tph_c12950 mgtA; GDP-mannose-dependent alpha-mannosyltransferase MgtA K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Tph_c22650 ugtP; processive diacylglycerol glucosyltransferase UgtP K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D Tph_c11790 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D Tph_c11800 pbpF; penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tph_c28170 tarA; N-acetylmannosaminyltransferase TarA K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Tph_c02310 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Tph_c07760 icaA; poly-beta-1,6-N-acetyl-D-glucosamine synthase IcaA K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tpz01005]
D Tph_c02670 glycosyl transferase, group 4 K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D Tph_c02310 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase TagO K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tpz01011]
D Tph_c12670 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tph_c28070 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Tph_c12660 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Tph_c12650 murC; UDP-N-acetylmuramate--L-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Tph_c12620 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Tph_c12590 murE1; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Tph_c13150 ddl; D-alanine--D-alanine ligase Ddl K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Tph_c18560 alr1; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D Tph_c27850 alr2; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D Tph_c04130 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3]
D Tph_c12610 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase MraY K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Tph_c12640 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Tph_c09300 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Tph_c21160 mviN2; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Tph_c05310 mviN1; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Tph_c11800 pbpF; penicillin-binding protein 1F K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Tph_c06000 mrdA; penicillin-binding protein 2, peptidoglycan glycosyltransferase MrdA K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Tph_c12580 spoVD; stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Tph_c14240 pbpA; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D Tph_c11390 dacF1; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c15870 dacF2; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c16050 dacF3; D-alanyl-D-alanine carboxypeptidase DacF K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Tph_c11650 lytF; endopeptidase LytF K19224 lytE; peptidoglycan DL-endopeptidase LytE [EC:3.4.-.-]
D Tph_c17680 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D Tph_c18050 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Tph_c16880 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Tph_c18470 sleB1; spore cortex-lytic enzyme SleB K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Tph_c12350 spoIID: sproulation stage II protein D, amidase enhancer LytB K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Tph_c28200 spoIID2; sporulation stage II protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Tph_c27170 spoIID1; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Tph_c04100 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c25520 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c06390 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:tpz01004]
D Tph_c13740 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Tph_c13760 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Tph_c13720 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Tph_c13730 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Tph_c13710 fabZ; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Tph_c13750 fabK; enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Tph_c13170 lipolytic enzyme G-D-S-L family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D Tph_c19080 lcfB; long-chain-fatty-acid--CoA ligase LcfB K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tph_c10120 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Tph_c08030 plsY1; glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tph_c15590 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Tph_c15700 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tpz01006]
D Tph_c16280 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Tph_c15430 hepT2; heptaprenyl diphosphate synthase component 2 K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D Tph_c11200 uppS; undecaprenyl pyrophosphate synthase UppS K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Tph_c13850 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tph_c22310 ubiA2; 4-hydroxybenzoate nonaprenyltransferase UbiA K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:tpz01007]
D Tph_c17650 gltX; glutamyl-tRNA synthetase GltX K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tph_c18270 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tph_c15920 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tph_c04930 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tph_c27890 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tph_c28730 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tph_c12900 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tph_c04910 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tph_c21390 leuS; leucyl-tRNA ligase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tph_c26180 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tph_c12500 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tph_c12490 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tph_c05760 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tph_c05770 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tph_c00180 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tph_c11260 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tph_c09950 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tph_c16940 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tph_c13350 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tph_c13360 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tph_c14370 dapL; LL-diaminopimelate aminotransferase DapL K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Tph_c15070 yugH; aminotransferase YugH K10907 K10907; aminotransferase [EC:2.6.1.-]
D Tph_c15020 hisC; histidinol-phosphate aminotransferase HisC K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Tph_c25450 argD2; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Tph_c22330 putative aminotransferase class-III K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D Tph_c13270 argD1; ornithine/acetylornithine aminotransferase ArgD K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Tph_c15270 hemL; glutamate-1-semialdehyde 2,1-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Tph_c19890 ilvE1; branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Tph_c20540 ilvE2; putative branched-chain-amino-acid aminotransferase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tpz00194]
D Tph_c27360 atpE; ATP synthase F1complex subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Tph_c27370 atpD; ATP synthase F1 complex subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Tph_c27380 atpG; ATP synthase F1 complex subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Tph_c27390 atpA; ATP synthase F1 complex subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Tph_c27400 atpH; ATP synthase F1 complex subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Tph_c27410 atpF; ATP synthase F0 complex subunit beta K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Tph_c27420 atpC; ATP synthase F0 complex subunit gamma K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Tph_c27430 atpB; ATP synthase F0 complex subunit alpha K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tph_c27450 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tpz03000]
D Tph_c09500 transcriptional regulator LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Tph_c27140 spoIIID; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D Tph_c05780 ccpN; transcriptional repressor CcpN K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D Tph_c01790 yvoA1; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator
D Tph_c27990 yvoA2; HTH-type transcriptional repressor YvoA K03710 K03710; GntR family transcriptional regulator
D Tph_c10670 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D Tph_c27210 ytrA; HTH-type transcriptional repressor YtrA K07979 ytrA; GntR family transcriptional regulator
D Tph_c24790 TetR-like transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D Tph_c21690 adhR; HTH-type transcriptional regulator AdhR K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D Tph_c14950 fur; ferric uptake regulation protein Fur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Tph_c29170 fnr; anaerobic regulatory protein Fnr K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Tph_c19900 BadM/Rrf2-like transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Tph_c09140 transcriptional regulator BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Tph_c20570 cymR; HTH-type transcriptional regulator K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Tph_c14530 ArsR-like transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Tph_c02220 PadR-like transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D Tph_c14400 PadR-like transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D Tph_c27220 iron dependent repressor K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D Tph_c26600 birA; biotin--acetyl-CoA-carboxylase ligase BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Tph_c07090 hypothetical protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D Tph_c01340 sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tph_c01700 sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tph_c00530 sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tph_c03780 stc; signal-transduction and transcriptional-control protein Stc K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tph_c21610 sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tph_c19460 sigma54 specific transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tph_c27070 ygeV; sigma-54-dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D Tph_c20420 rocR; arginine utilization regulatory protein RocR K06714 rocR; arginine utilization regulatory protein
D Tph_c05930 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D Tph_c10770 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D Tph_c21860 DNA-binding protein K07729 K07729; putative transcriptional regulator
D Tph_c19420 putative CopG-like DNA-binding protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tph_c03280 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tph_c02080 CopG-like transcriptional regulator K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tph_c20650 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Tph_c17130 PurC-like protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D Tph_c01910 hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D Tph_c24060 hypothetical protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D Tph_c01140 hypothetical protein K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D Tph_c28750 AbrB-like transcriptional regulator K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D Tph_c28250 spoVT; stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D Tph_c00340 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tph_c00310 noc; nucleoid occlusion protein Noc K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tph_c03840 carD; putative transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Tph_c04530 putative glycerol-3-phosphate responsive antiterminator K02443 glpP; glycerol uptake operon antiterminator
D Tph_c16230 argR; arginine repressor ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Tph_c21130 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Tph_c03690 ctsR; transcriptional repressor CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D Tph_c09350 mtrB; tryptophan RNA-binding attenuator protein MtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein)
D Tph_c14490 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Tph_c12760 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D Tph_c12550 hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tpz03021]
D Tph_c25570 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tph_c25930 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tph_c25920 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tph_c14330 DNA-directed RNA polymerase, subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tph_c05850 rpoD1; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Tph_c12720 sigE; sporulation-specific RNA polymerase sigma-70 factor SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tph_c12730 sigG1; sporulation-specific RNA polymerase sigma-G factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tph_c16780 RNA polymerase sigma factor, sigma-70 family K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tph_c16830 rpoD2; DNA-directed RNA polymerase sigma 70 subunit RpoD K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tph_c16020 sigG2; sporulation sigma-G factor SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Tph_c04970 sigH; RNA polymerase sigma-H factor SigH K27000 sigH; RNA polymerase sigma-H factor
D Tph_c06730 rpoN; RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Tph_c11100 fliA; RNA polymerase flagellar operon sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D Tph_c11280 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D Tph_c16330 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D Tph_c26090 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Tph_c26200 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Tph_c27810 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tpz03019]
D Tph_c10590 cell division control protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Tph_c06080 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tph_c10140 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tph_c11470 rnjA; ribonuclease J 1 K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tph_c06110 beta-lactamase domain-containing protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Tph_c11590 cvfA; 2',3'-cyclic-nucleotide 2'-phosphodiesterase CvfA K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Tph_c07140 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tph_c01900 yhaM; 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Tph_c06780 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tph_c11370 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Tph_c27810 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Tph_c09380 pfkA; 6-phosphofructokinase PfkA K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Tph_c21110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tph_c04000 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c08370 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c13840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D Tph_c05710 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D Tph_c06690 ATPase-like protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:tpz03011]
D Tph_c11140 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Tph_c25790 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Tph_c25580 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Tph_c25680 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Tph_c00700 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Tph_c25890 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Tph_c25710 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Tph_c25530 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Tph_c25860 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Tph_c25590 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Tph_c25900 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Tph_c25600 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Tph_c25720 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14
D Tph_c11360 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Tph_c10230 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Tph_c25760 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Tph_c00720 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Tph_c25810 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Tph_c21240 s20: ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Tph_c22780 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Tph_c26070 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Tph_c25820 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Tph_c25850 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Tph_c25840 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Tph_c25730 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Tph_c25700 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Tph_c00780 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Tph_c26060 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Tph_c26080 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Tph_c26050 l12: ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Tph_c25540 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Tph_c25750 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Tph_c25670 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Tph_c25780 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Tph_c25560 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Tph_c25690 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Tph_c10270 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Tph_c13330 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Tph_c21600 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Tph_c25800 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Tph_c25830 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Tph_c25740 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Tph_c21580 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Tph_c14000 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Tph_c25770 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Tph_c27580 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Tph_c10110 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Tph_c26110 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Tph_c13320 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Tph_c25610 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Tph_c28310 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Tph_c25910 ribosomal protein HS6-type K07590 RP-L7A; large subunit ribosomal protein L7A
D Tph_c13930 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tph_c26130 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tph_c18230 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tph_c13950 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c26170 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c18250 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c13940 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c26140 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c18240 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tpz03009]
D Tph_c10140 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tph_c10590 cell division control protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Tph_c22690 era; GTP-binding protein Era K03595 era; GTPase
D Tph_c21570 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D Tph_c11280 nusA; transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D Tph_c16330 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D Tph_c26090 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Tph_c28690 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Tph_c14270 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Tph_c10040 rsmD; rRNA methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Tph_c21090 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Tph_c00300 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tph_c12560 mraW; S-adenosyl-L-methionine-dependent methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Tph_c28760 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Tph_c16250 hemolysin TlyA family protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Tph_c04950 yacO; tRNA/rRNA methyltransferase YacO K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Tph_c28040 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Tph_c23500 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Tph_c15830 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Tph_c12970 rluA; pseudouridylate synthase RluA K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Tph_c18530 rimI; putative ribosomal-protein-alanine acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Tph_c10250 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Tph_c11530 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Tph_c06080 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Tph_c16910 holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Tph_c14220 rsgA; ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Tph_c15600 engA; ribosome GTPase EngA K03977 engA; GTPase
D Tph_c10290 rbgA; ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D Tph_c27530 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tph_c12460 relA; GTP pyrophosphokinase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Tph_c11320 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Tph_c11270 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D Tph_c21520 ribosome protein, Iojap-like protein K09710 ybeB; ribosome-associated protein
D Tph_c22720 putative metallohydrolase, YbeY/UPF0054 family K07042 ybeY; probable rRNA maturation factor
D Tph_c06460 yfiA; ribosomal subunit interface protein YfiA K05808 hpf; ribosome hibernation promoting factor
D Tph_c18610 engD; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase
D Tph_c10100 hypothetical protein DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tpz03016]
D Tph_c22830 putative metal-dependent phosphohydrolase, HD subdomain protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Tph_c09560 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Tph_c23770 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Tph_c11260 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Tph_c12900 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Tph_c21390 leuS; leucyl-tRNA ligase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tph_c28730 metG; methionyl-tRNA synthetase MetG K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Tph_c27890 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tph_c26180 lysS; lysyl-tRNA synthetase LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Tph_c12500 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tph_c16940 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Tph_c09950 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Tph_c00180 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Tph_c04930 cysS; cysteinyl-tRNA synthetase CysS K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Tph_c04910 valS; valyl-tRNA synthetase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Tph_c12490 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Tph_c13350 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Tph_c13360 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Tph_c18270 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tph_c15920 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Tph_c12470 dtd; D-tyrosyl-tRNA(tyr) deacylase Dtd K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Tph_c21060 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Tph_c25550 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Tph_c11340 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Tph_c19200 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c17300 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c27530 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Tph_c13850 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Tph_c00290 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Tph_c17360 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tph_c00670 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Tph_c00260 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Tph_c04140 rph; ribonuclease Rph K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Tph_c11570 ligT; 2'-5' RNA ligase LigT K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Tph_c00590 kptA; RNA 2'-phosphotransferase KptA K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D Tph_c05760 glyQ; glycyl-tRNA synthetase alpha subunit GlyQ K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Tph_c05770 glyS; glycyl-tRNA synthetase beta subunit GlyS K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Tph_c17650 gltX; glutamyl-tRNA synthetase GltX K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Tph_c29070 tadA; tRNA-specific adenosine deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Tph_c26580 nifR; tRNA-dihydrouridine synthase 1 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Tph_c13910 miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Tph_c21080 yqeV; methylthiotransferase YqeV K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Tph_c10730 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Tph_c10260 trmD; tRNA (guanine-N(1)-)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Tph_c18370 hypothetical protein DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Tph_c13190 trmH; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmH K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Tph_c13340 spoU; tRNA/rRNA methyltransferase SpoU K03437 spoU; RNA methyltransferase, TrmH family
D Tph_c17290 trmU; tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase TrmU K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Tph_c13040 ttcA1; putative 2-thiocytidine tRNA biosysnthesis protein TtcA K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Tph_c13180 ttcA2; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Tph_c19230 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D Tph_c12360 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Tph_c18380 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Tph_c09550 4Fe-4S ferredoxin K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Tph_c12320 hypothetical protein DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Tph_c12370 tgt; queuine tRNA-ribosyltransferase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Tph_c26820 tilS; tRNA(Ile)-lysidine synthase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Tph_c18540 yeaZ; universal bacterial protein glycoprotease YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Tph_c18500 gcp; putative O-sialoglycoprotein endopeptidase Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Tph_c18550 ydiB; UPF0079 ATP-binding protein YdiB K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Tph_c07140 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Tph_c11370 pnp; polyribonucleotide nucleotidyltransferase Pnp K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tpz03012]
D Tph_c11310 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Tph_c13310 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Tph_c11150 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D Tph_c25870 tuf2; elongation factor Tu 2 K02358 tuf; elongation factor Tu
D Tph_c25880 fusA2; elongation factor G K02355 fusA; elongation factor G
D Tph_c14850 fusA1; elongation factor G K02355 fusA; elongation factor G
D Tph_c00440 selB; selenocysteine-specific elongation factor SelB K03833 selB; selenocysteine-specific elongation factor
D Tph_c27560 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Tph_c11170 frr; ribosome-recycling factor Frr K02838 frr; ribosome recycling factor
D Tph_c27550 hemK; methyltransferase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Tph_c28300 pth; peptidyl-tRNA hydrolase Pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Tph_c25620 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Tph_c16480 efp; translation elongation factor P K02356 efp; elongation factor P
D Tph_c06490 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tpz03110]
D Tph_c03720 clpB; chaperone protein ClpB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Tph_c04650 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Tph_c10760 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Tph_c21110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tph_c04000 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c08370 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c21100 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tph_c21120 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D Tph_c20970 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Tph_c22450 putative heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Tph_c10580 gvpH; heat shock protein HSP20 K13993 HSP20; HSP20 family protein
D Tph_c04010 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D Tph_c21290 degP; serine protease DegP K04771 degP; serine protease Do [EC:3.4.21.107]
D Tph_c26810 ftsH2; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tph_c11550 ftsH1; cell division protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Tph_c27430 atpB; ATP synthase F0 complex subunit alpha K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Tph_c28050 ribosomal RNA small subunit methyltransferase K23151 METTL23; methyltransferase-like protein 23 [EC:2.1.1.-]
D Tph_c23520 hypothetical protein K07803 zraP; zinc resistance-associated protein
D Tph_c26890 hypA; hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Tph_c26880 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Tph_c17320 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:tpz04131]
D Tph_c26800 ndk; nucleoside diphosphate kinase Ndk K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Tph_c10590 cell division control protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Tph_c06740 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tph_c09390 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:tpz03032]
D Tph_c24630 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Tph_c28220 hup; DNA-binding protein Hup K03530 hupB; DNA-binding protein HU-beta
D Tph_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tph_c00800 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Tph_c15040 IstB-like ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Tph_c05840 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D Tph_c00710 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D Tph_c09340 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tph_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tph_c21250 holA; DNA polymerase III, subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tph_c28780 holB; DNA polymerase iii, delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tph_c29010 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tph_c10300 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Tph_c18090 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tph_c08910 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tph_c04820 dam1; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07190 D12 class n6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07930 dam2; adenine-specific DNA methyltransferase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c00130 gyrA; DNA gyrase subunit alpha K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tph_c00050 gyrB; DNA gyrase subunit beta K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tph_c10720 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tpz03036]
D Tph_c10140 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Tph_c28220 hup; DNA-binding protein Hup K03530 hupB; DNA-binding protein HU-beta
D Tph_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Tph_c13840 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D Tph_c10160 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D Tph_c15910 scpA; chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Tph_c15900 scpB; chromosome segregation and condensation protein ScpB K06024 scpB; segregation and condensation protein B
D Tph_c12690 ftsA1; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tph_c26960 hypothetical protein K05589 ftsB; cell division protein FtsB
D Tph_c06530 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Tph_c11500 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Tph_c12570 hypothetical protein K03586 ftsL; cell division protein FtsL
D Tph_c12680 ftsQ; polypeptide-transport protein FtsQ K03589 ftsQ; cell division protein FtsQ
D Tph_c12630 spoVE2; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D Tph_c06540 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Tph_c12700 ftsZ1; cell division protein, tubulin FtsZ K03531 ftsZ; cell division protein FtsZ
D Tph_c13370 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D Tph_c04100 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c25520 cwlD; germination-specific N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c06390 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c06010 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Tph_c06020 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Tph_c06030 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Tph_c12840 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D Tph_c05970 mreB1; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tph_c27130 mreB2; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tph_c05980 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D Tph_c05990 mreD; rod shape-determining protein K03571 mreD; rod shape-determining protein MreD
D Tph_c06040 spoVE1; stage V sporulation protein E K05837 rodA; rod shape determining protein RodA
D Tph_c00330 soj1; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D Tph_c12210 soj2; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D Tph_c00340 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tph_c00310 noc; nucleoid occlusion protein Noc K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tph_c17360 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Tph_c00300 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Tph_c10730 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Tph_c10740 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D Tph_c16080 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D Tph_c07400 phage integrase K04763 xerD; integrase/recombinase XerD
D Tph_c07410 phage integrase K04763 xerD; integrase/recombinase XerD
D Tph_c28230 hypothetical protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D Tph_c07480 fic; adenosine monophosphate-protein transferase Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Tph_c06710 whiA; putative sporulation transcription regulator K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:tpz03400]
D Tph_c21380 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase Ogt K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Tph_c18730 pdg; ultraviolet N-glycosylase/AP lyase Pdg K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Tph_c27240 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Tph_c10020 udgA; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Tph_c18080 mutM; formamidopyrimidine-DNA glycosylase MutM K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Tph_c22340 nfo; apurinic endonuclease Nfo K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Tph_c13250 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Tph_c08910 ligA; DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Tph_c18090 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Tph_c06640 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D Tph_c06630 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D Tph_c06650 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Tph_c08890 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Tph_c25930 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Tph_c25920 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Tph_c25570 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Tph_c14330 DNA-directed RNA polymerase, subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Tph_c28270 mfd; transcription-repair-coupling factor Mfd K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Tph_c13890 mutS2; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Tph_c13440 mutS1; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2
D Tph_c13860 mutL1; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Tph_c16300 xseA2; exodeoxyribonuclease VII large subunit XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Tph_c16290 xseA1; exodeoxyribonuclease VII small subunit XseA K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Tph_c09340 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Tph_c00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Tph_c21250 holA; DNA polymerase III, subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Tph_c28780 holB; DNA polymerase iii, delta prime subunit HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Tph_c29010 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Tph_c00710 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D Tph_c04820 dam1; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07190 D12 class n6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07930 dam2; adenine-specific DNA methyltransferase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c11580 recA; protein RecA K03553 recA; recombination protein RecA
D Tph_c12300 ruvA; holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Tph_c12310 ruvB; holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Tph_c12290 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Tph_c14300 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Tph_c25400 putative metallo-dependent phosphatase K03547 sbcD; DNA repair protein SbcD/Mre11
D Tph_c09260 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11
D Tph_c03810 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Tph_c00030 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Tph_c09980 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Tph_c05740 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Tph_c28990 recR; recombination protein RecR K06187 recR; recombination protein RecR
D Tph_c16220 recN; DNA recombination/repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Tph_c18980 cas1; CRISPR-associated metal-dependent DNA-specific endonuclease cas1 K15342 cas1; CRISP-associated protein Cas1
D Tph_c24390 cas1; CRISPR-associated metal-dependent DNA-specific endonuclease cas1 K15342 cas1; CRISP-associated protein Cas1
D Tph_c10700 ATP-dependet DANN helicase Ku type K10979 ku; DNA end-binding protein Ku
D Tph_c09930 ligD2; ATP dependent DNA ligase LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Tph_c08080 ligD1; ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D Tph_c00130 gyrA; DNA gyrase subunit alpha K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Tph_c00050 gyrB; DNA gyrase subunit beta K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Tph_c10720 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Tph_c28220 hup; DNA-binding protein Hup K03530 hupB; DNA-binding protein HU-beta
D Tph_c13030 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Tph_c13670 lexA2; LexA repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tph_c11850 lexA1; LexA repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Tph_c13380 polX; DNA polymerase/3'-5' exonuclease PolX K02347 polX; DNA polymerase (family X)
D Tph_c25370 yoaA; ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Tph_c11330 phosphoesterase RecJ-like protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:tpz03029]
D Tph_c11310 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Tph_c13310 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Tph_c11150 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D Tph_c25870 tuf2; elongation factor Tu 2 K02358 tuf; elongation factor Tu
D Tph_c25880 fusA2; elongation factor G K02355 fusA; elongation factor G
D Tph_c14850 fusA1; elongation factor G K02355 fusA; elongation factor G
D Tph_c22690 era; GTP-binding protein Era K03595 era; GTPase
D Tph_c18270 tyrS; tyrosyl-tRNA synthetase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Tph_c21390 leuS; leucyl-tRNA ligase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Tph_c12500 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Tph_c27890 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Tph_c08970 gatA; glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Tph_c08980 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Tph_c08960 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Tph_c00710 ssb; single-stranded DNA-binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D Tph_c21110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tph_c21120 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D Tph_c04000 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c08370 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c04010 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D Tph_c21100 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Tph_c19200 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c17300 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c00270 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tpz02000]
D Tph_c19120 yfiB; ABC transporter ATP-binding protein YfiB K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tph_c19110 ABC transporter-like protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Tph_c26400 modA2; molybdate/tungstate ABC transport system substrate binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D Tph_c01600 modA1; molybdate ABC transporter, periplasmic molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D Tph_c26410 modB; molybdate/tungstate ABC transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D Tph_c23560 putative ABC-type transporter K02018 modB; molybdate transport system permease protein
D Tph_c01610 wtpB; molybdate/tungstate transport system permease protein WtpB K02018 modB; molybdate transport system permease protein
D Tph_c26420 modC; molybdate/tungstate ABC transport system ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Tph_c01620 wtpC; molybdate/tungstate import ATP-binding protein WtpC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Tph_c03980 tupB; ABC-type tungstate transport system, permease component TupB K05772 tupA; tungstate transport system substrate-binding protein
D Tph_c27340 putative phosphate ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D Tph_c27330 pstB2; phosphate import ATP-binding protein PstB K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D Tph_c20170 opuCC; glycine betaine/carnitine/choline-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D Tph_c20380 ABC-type glycine betaine transport system, substrate-binding domain protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D Tph_c20160 hypothetical protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20390 opuBB; choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20410 opuCB2; glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20190 opuCB1; glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D Tph_c20400 opuCA2; glycine betaine/carnitine/choline transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Tph_c20180 opuCA1; glycine betaine/carnitine/choline transport ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Tph_c13820 putative bicarbonate ABC transport system substrate binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Tph_c13800 tauC; taurine ABC transport system permease protein TauC K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Tph_c13810 tauB; taurine ABC transport system ATP-binding protein TauB K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Tph_c29140 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D Tph_c29150 putative ABC transporter, ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Tph_c04830 pstS; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D Tph_c04880 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D Tph_c04890 pstA; phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D Tph_c04860 pstB1; phosphate ABC transporter, ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Tph_c22100 glnH; glutamine-binding periplasmic protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D Tph_c22110 glnP; glutamine transport system permease protein GlnP K10037 glnP; glutamine transport system permease protein
D Tph_c22120 glnQ; glutamine transport ATP-binding protein GlnQ K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Tph_c23730 leu/ile/val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tph_c00450 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein BraC K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Tph_c23740 braD2; high-affinity branched-chain amino acid transport system permease protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D Tph_c00460 braD1; high-affinity branched-chain amino acid transport system permease protein BraD K01997 livH; branched-chain amino acid transport system permease protein
D Tph_c23750 branched chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D Tph_c00470 ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D Tph_c23760 livG2; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tph_c00480 livG1; high-affinity branched-chain amino acid transport ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Tph_c00490 braG; high-affinity branched-chain amino acid transport ATP-binding protein BraG K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Tph_c22620 tpn32; lipoprotein TpN32 K02073 metQ; D-methionine transport system substrate-binding protein
D Tph_c22630 metI; putative D-methionine transport system permease protein MetI K02072 metI; D-methionine transport system permease protein
D Tph_c22640 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D Tph_c18310 cobalt import ABC transporter, substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Tph_c18320 cobalt import ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D Tph_c18330 cbiO4; cobalt import ATP-binding protein CbiO 2 K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Tph_c24950 gsiB2; glutathione-binding protein GsiB K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25000 xp55: protein XP55 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25100 copper amine oxidase-like protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25190 hbpA; heme-binding protein A K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c25270 appA2; oligopeptide-binding protein AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c17110 ddpA; D,D-dipeptide ABC transport system substrate binding protein DdpA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c03520 appA1; oligopeptide-binding protein AppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c17920 gsiB1; glutathione ABC transport system substrate protein GsiD K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c18030 dppE; dipeptide-binding protein DppE K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Tph_c24990 appB; oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c25030 putative peptide permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c25340 nikB; nickel transport system permease protein NikB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c17100 ddpB; D,D-dipeptide ABC transport system permease protein DdpB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c03530 gsiC1; glutathione transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c17930 gsiC2; glutathione ABC transport system permease protein GsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Tph_c25020 dppC2; dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c25330 nikC; nickel transport system permease protein NikC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c03540 gsiD1; glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c17090 dppC1; D,D-dipeptide ABC transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c17940 gsiD2; glutathione ABC transport system permease protein GsiA K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c24980 appC; oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Tph_c25150 oppD1; oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c25300 oppD2; oligopeptide transport ATP-binding protein OppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c17080 dppD; D,D-dipeptide ABC transport system ATP-binding protein DppD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c03550 oligopeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c17950 gsiA; glutathione ABC transport system ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Tph_c03560 oligopeptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tph_c25290 appF; oligopeptide transport ATP-binding protein AppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Tph_c01060 ABC transporter, periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Tph_c01210 ABC transporter, periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Tph_c01570 ABC transporter, periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Tph_c01070 ABC transporter, permease protein, FecCD family K02015 ABC.FEV.P; iron complex transport system permease protein
D Tph_c01190 ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Tph_c01550 ABC transporter, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D Tph_c01080 ABC transporter, ATP binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Tph_c01200 ABC transporter, ATP binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Tph_c01560 ABC transporter, ATP binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Tph_c15820 btuF; vitamin B12 ABC transport system substrate-binding protein BtuF K25034 btuF; cobalamin transport system substrate-binding protein
D Tph_c03410 putative iron ABC transporter, periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Tph_c15810 btuC; vitamin B12 ABC transport system permease protein BtuC K25027 btuC; cobalamin transport system permease protein
D Tph_c03420 fecCD; ABC transporter, permease protein FecCD K25027 btuC; cobalamin transport system permease protein
D Tph_c15800 hmuV; hemin ABC transport system ATP-binding protein HmuV K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Tph_c03430 putative iron ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Tph_c22420 adcA; zinc transport system zinc-binding lipoprotein AdcA K09815 znuA; zinc transport system substrate-binding protein
D Tph_c22400 ABC-3 familiy transport protein K09816 znuB; zinc transport system permease protein
D Tph_c22410 zurA; zinc uptake system ATP-binding protein ZurA K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Tph_c09460 putative membrane protein K02009 cbiN; cobalt/nickel transport protein
D Tph_c05190 cbiN; cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein
D Tph_c05200 cbiQ2; cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tph_c09780 cbiQ3; cobalt ABC transport system permease CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D Tph_c05180 cbiM1; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Tph_c09470 cbiM2; cobalamin (vitamin B12) biosynthesis CbiM protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D Tph_c05210 cbiO1; cobalt ABC transporter, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tph_c09790 cbiO2; cobalt ABC transport system ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Tph_c21010 bioY; protein BioY K03523 bioY; biotin transport system substrate-specific component
D Tph_c21030 cobalt transport protein K16783 bioN; biotin transport system permease protein
D Tph_c21020 cbiO3; cobalt import ATP-binding protein CbiO K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D Tph_c03220 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D Tph_c03240 cbiQ1; ABC-type cobalt transport system, permease component CbiQ K16785 ecfT; energy-coupling factor transport system permease protein
D Tph_c04370 cbiQ4; ABC-type cobalt import system, permease component K16785 ecfT; energy-coupling factor transport system permease protein
D Tph_c04360 putative ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tph_c03230 putative ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Tph_c24800 ybhS; inner membrane transport permease YbhS K25181 ybhS; drug efflux transport system permease protein
D Tph_c24820 ybhF2; ABC transporter ATP-binding protein YbhF K25182 ybhF; drug efflux transport system ATP-binding protein
D Tph_c24810 ybhF1; ABC transporter ATP-binding protein YbhF K25182 ybhF; drug efflux transport system ATP-binding protein
D Tph_c24830 HlyD-like secretion protein K25183 ybhG; membrane fusion protein YbhG
D Tph_c27180 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D Tph_c10690 ABC transport system permease protein K16919 ytrC_D; acetoin utilization transport system permease protein
D Tph_c10680 ABC transport system ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D Tph_c06540 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D Tph_c06530 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Tph_c25210 putative ABC-2-like transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tph_c03500 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Tph_c12270 nodI2; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tph_c03490 nodi1; Nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tph_c25220 nodi3; nod factor export ATP-binding protein I K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Tph_c20470 yknZ; ABC transporter permease protein YknZ K02004 ABC.CD.P; putative ABC transport system permease protein
D Tph_c23580 macB2; macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D Tph_c23660 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D Tph_c20480 macB1; macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tph_c23600 ABC-type antimicrobial peptide transport system, ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tph_c23670 putative ATPase, AAA+ type K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Tph_c09400 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Tph_c04040 norM; multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D Tph_c03310 mepA; multidrug export protein MepA K26937 dinF; MATE family, multidrug efflux pump
D Tph_c21840 drug resistance transporter, Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D Tph_c17900 fsR; fosmidomycin resistance protein FsR K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Tph_c08750 amt; high affinity ammonium transporter Amt K03320 amt; ammonium transporter, Amt family
D Tph_c29050 yhdY; mechanosensitive ion channel protein YhdY K16052 ynaI; MscS family membrane protein
D Tph_c05350 putative flagellar motor component MotA K02556 motA; chemotaxis protein MotA
D Tph_c05340 motB; putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D Tph_c04070 corA; magnesium transport protein CorA K03284 corA; magnesium transporter
D Tph_c13400 camphor resistance CrcB-like protein K06199 crcB; fluoride exporter
D Tph_c13410 ccrB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Tph_c09050 gerKB2; spore germination protein KB K06296 gerKB; spore germination protein KB
D Tph_c08780 gerKB1; spore germination protein KB K06296 gerKB; spore germination protein KB
D Tph_c28410 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Tph_c26940 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Tph_c09750 sodium/calcium exchanger K07301 yrbG; cation:H+ antiporter
D Tph_c28840 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D Tph_c28960 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D Tph_c28850 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D Tph_c28930 ktrC; Ktr system potassium uptake protein C K03499 trkA; trk/ktr system potassium uptake protein
D Tph_c24690 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Tph_c04440 clcB; voltage gated chloride channel K03281 clcA; chloride channel protein, CIC family
D Tph_c23900 dctM; TRAP transporter, DctM subunit DctM K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Tph_c23920 dctP; C4-dicarboxylate-binding periplasmic protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D Tph_c06440 II-like Na/Pi co-transporter K03324 yjbB; phosphate:Na+ symporter
D Tph_c17980 arsB; arsenite resistance protein ArsB K03325 ACR3; arsenite transporter
D Tph_c28240 hypothetical protein K06409 spoVB; stage V sporulation protein B
D Tph_c21160 mviN2; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Tph_c05310 mviN1; virulence factor MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Tph_c20990 azlC; branched-chain amino acid permease AzlC K26605 azlC; branched chain amino acid efflux pump
D Tph_c20980 azlD; branched-chain amino acid transporter AzlD K26606 azlD; branched chain amino acid efflux pump
D Tph_c06410 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D Tph_c12630 spoVE2; stage V sporulation protein E K03588 ftsW; cell division protein FtsW
D Tph_c27520 hypothetical protein K23242 mntP; manganese efflux pump family protein
D Tph_c08020 hppA1; pyrophosphate-energized proton pump HppA K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Tph_c26670 hppA2; pyrophosphate-energized proton pump HppA K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Tph_c16380 accB acetyl-CoA carboxylase, biotin carboxyl carrier protein K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Tph_c01440 bthL; pyrogallol hydroxytransferase small subunit BthL K08358 ttrB; tetrathionate reductase subunit B
D Tph_c02650 yveL; tyrosine-protein kinase YveL K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D Tph_c18840 feoA; ferrous iron transporter FeoA K04758 feoA; ferrous iron transport protein A
D Tph_c18860 feoB2; ferrous iron transport protein K04759 feoB; ferrous iron transport protein B
D Tph_c04550 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Tph_c11750 transporter MgtC/SapB family K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:tpz02044]
D Tph_c16620 pilA; fimbrial protein PilA K02456 gspG; general secretion pathway protein G
D Tph_c07290 A24A-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tph_c16540 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tph_c16650 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D Tph_c16630 pilC; type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tph_c16570 pilM2; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Tph_c16640 pilT1; twitching mobility protein PilT K02669 pilT; twitching motility protein PilT
D Tph_c16660 pilT2; twitching mobility protein PilT K02669 pilT; twitching motility protein PilT
D Tph_c05450 putative prepilin type 4 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Tph_c07300 CpaB-like pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D Tph_c05480 cpaB; pilus assembly protein, Flp-type K02279 cpaB; pilus assembly protein CpaB
D Tph_c05490 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Tph_c07320 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Tph_c05500 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Tph_c05510 type II secretion system protein F K12510 tadB; tight adherence protein B
D Tph_c05520 tadC; putative pilus assembly protein TadC K12511 tadC; tight adherence protein C
D Tph_c05440 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D Tph_c12860 hypothetical protein Ycf19 family K02221 yggT; YggT family protein
D Tph_c21370 competence protein ComEA K02237 comEA; competence protein ComEA
D Tph_c27480 comEB; ComE operon protein 2 K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Tph_c21280 comEC; ComE operon protein 3 K02238 comEC; competence protein ComEC
D Tph_c22850 beta-lactamase-like protein K02238 comEC; competence protein ComEC
D Tph_c05540 comFA; ComF operon protein 1 K02240 comFA; competence protein ComFA
D Tph_c13650 comFB; late competence development protein ComFB K02241 comFB; competence protein ComFB
D Tph_c11020 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tph_c11010 flhB2; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tph_c10320 flhB1; flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein
D Tph_c10820 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tph_c10840 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tph_c10850 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tph_c10950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tph_c10970 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tph_c10980 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tph_c10990 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tph_c11000 fliR; flagellar biosynthetic protein FiR K02421 fliR; flagellar biosynthesis protein FliR
D Tph_c07610 TRAG-like protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Tph_c06470 secA; protein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Tph_c12410 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D Tph_c26100 secE; preprotein translocase SecE K03073 secE; preprotein translocase subunit SecE
D Tph_c12420 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D Tph_c06790 secG; preprotein translocase SecG K03075 secG; preprotein translocase subunit SecG
D Tph_c25660 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D Tph_c10220 ffh; signal recognition particle GTPase Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Tph_c10170 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Tph_c00270 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Tph_c21300 putative bacterial sec-independent translocation protein K03116 tatA; sec-independent protein translocase protein TatA
D Tph_c18180 tatA; twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D Tph_c15420 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins
C 02022 Two-component system [BR:tpz02022]
D Tph_c04850 phoR2; alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Tph_c04840 phoP; alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Tph_c23640 cssS; sensor histidine kinase CssS K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Tph_c23630 cssR; transcriptional regulatory protein CssR K07770 cssR; two-component system, OmpR family, response regulator CssR
D Tph_c21500 transcriptional regulatory protein, luxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D Tph_c05410 degS; sensor protein DegS K07777 degS; two-component system, NarL family, sensor histidine kinase DegS [EC:2.7.13.3]
D Tph_c16200 spo0A; stage 0 sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Tph_c14690 lytT1; sensory transduction protein LytT K02477 K02477; two-component system, LytTR family, response regulator
D Tph_c08190 atoS; signal transduction histidine-protein kinase AtoS K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Tph_c05090 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c11070 cheA2; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c05080 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c05120 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c10960 cheY2; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c05050 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c11060 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c20610 response regulatory protein K07720 yesN; two-component system, response regulator YesN
D Tph_c03630 transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Tph_c06910 pdtaS; sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D Tph_c13000 pdtaR2; transcriptional regulatory protein PdtaR K22010 pdtaR; two-component system, response regulator PdtaR
D Tph_c08540 two-component response regulator K22010 pdtaR; two-component system, response regulator PdtaR
D Tph_c06920 pdtaR1; transcriptional regulatory protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:tpz02035]
D Tph_c05090 cheA1; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c11070 cheA2; chemotaxis sensor histidine kinase CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Tph_c18600 cheW2; chemotaxis protein Chew K03408 cheW; purine-binding chemotaxis protein CheW
D Tph_c05040 cheW1; chemotaxis signal transduction protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D Tph_c11080 cheC; inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Tph_c11090 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Tph_c15260 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Tph_c05050 cheB1; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c11060 cheB2; chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Tph_c05080 cheY1; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c05120 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c10960 cheY2; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Tph_c02100 tlpB; methyl-accepting chemotaxis protein TlpB K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c02930 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c05110 putative chemotaxis methyl-accepting receptor K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c05130 tlpA; methyl-accepting chemotaxis protein TlpA K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c09690 tlpC; methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D Tph_c10840 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D Tph_c10850 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Tph_c10860 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Tph_c10970 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D Tph_c10980 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Tph_c10990 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Tph_c11000 fliR; flagellar biosynthetic protein FiR K02421 fliR; flagellar biosynthesis protein FliR
D Tph_c11020 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Tph_c11010 flhB2; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Tph_c10830 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Tph_c10940 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Tph_c10950 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Tph_c10820 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Tph_c10930 fliL; flagellar basal body protein FliL K02415 fliL; flagellar protein FliL
D Tph_c10810 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Tph_c10880 fliK; flagellar hook-length control protein Flik K02414 fliK; flagellar hook-length control protein FliK
D Tph_c10790 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Tph_c10800 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Tph_c10890 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Tph_c27120 flgG2; flagellar basal-body rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D Tph_c27110 flgG1; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Tph_c27100 flgJ; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Tph_c10910 flgE; flagellar hook-basal protein FlgE K02390 flgE; flagellar hook protein FlgE
D Tph_c05670 flgK; flagellar hook protein 1 K02396 flgK; flagellar hook-associated protein 1
D Tph_c05690 flgL; flagellar hook protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Tph_c03120 fla; flagellin K02406 fliC; flagellin
D Tph_c22170 fliD; flagellar hook protein 2 FliD K02407 fliD; flagellar hook-associated protein 2
D Tph_c22190 flagellar hook 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D Tph_c22150 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Tph_c11100 fliA; RNA polymerase flagellar operon sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D Tph_c05350 putative flagellar motor component MotA K02556 motA; chemotaxis protein MotA
D Tph_c05340 motB; putative flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D Tph_c05700 fliW; flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D Tph_c05650 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Tph_c22160 putative flagellar protein K06603 flaG; flagellar protein FlaG
D Tph_c10920 flbD; flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D Tph_c11030 flhF; flagellar biosynthesis regulator FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D Tph_c11040 flhG; flagellar biosynthesis switch protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D Tph_c16640 pilT1; twitching mobility protein PilT K02669 pilT; twitching motility protein PilT
D Tph_c16660 pilT2; twitching mobility protein PilT K02669 pilT; twitching motility protein PilT
D Tph_c16650 pilB; type IV pilus assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D Tph_c16630 pilC; type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D Tph_c07290 A24A-like peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tph_c16540 pilD; type 4 prepilin-like proteins leader peptide-processing enzyme PilD K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Tph_c16570 pilM2; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Tph_c05440 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D Tph_c05450 putative prepilin type 4 peptidase K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D Tph_c07300 CpaB-like pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D Tph_c05480 cpaB; pilus assembly protein, Flp-type K02279 cpaB; pilus assembly protein CpaB
D Tph_c05490 response regulator receiver protein K02282 cpaE; pilus assembly protein CpaE
D Tph_c07320 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Tph_c05500 putative conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tpz04812]
D Tph_c25500 hypothetical protein K06990 MEMO1; MEMO1 family protein
D Tph_c05970 mreB1; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tph_c27130 mreB2; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tph_c07540 hypothetical protein K18640 parM; plasmid segregation protein ParM
D Tph_c12700 ftsZ1; cell division protein, tubulin FtsZ K03531 ftsZ; cell division protein FtsZ
D Tph_c12690 ftsA1; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Tph_c06010 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D Tph_c06020 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Tph_c06030 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Tph_c00330 soj1; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D Tph_c12210 soj2; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D Tph_c00340 parB; chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Tph_c00310 noc; nucleoid occlusion protein Noc K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tpz04147]
D Tph_c06780 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Tph_c06740 gap; glyceraldehyde-3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Tph_c06750 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Tph_c09390 pyk; pyruvate kinase Pyk K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Tph_c11630 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Tph_c04000 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c08370 groEL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Tph_c21110 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Tph_c06670 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Tph_c11720 guaB; inosine-5'-monophosphate dehydrogenase GuaB K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Tph_c25870 tuf2; elongation factor Tu 2 K02358 tuf; elongation factor Tu
D Tph_c10590 cell division control protein 48 K13525 VCP; transitional endoplasmic reticulum ATPase
D Tph_c21060 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Tph_c19080 lcfB; long-chain-fatty-acid--CoA ligase LcfB K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Tph_c08390 ahcY; adenosylhomocysteinase AhcY K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Tph_c25650 adk; adenylate kinase Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D Tph_c25420 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Tph_c25430 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Tph_c27050 D-hydantoinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Tph_c12980 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c12990 glnA4; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c08620 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Tph_c15300 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Tph_c00170 serA; D-3-phosphoglycerate dehydrogenase SerA K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Tph_c08500 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Tph_c17180 lpd; dihydrolipoyl dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Tph_c06760 tpiA; triosephosphate isomerase TpiA K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:tpz02048]
D Tph_c18980 cas1; CRISPR-associated metal-dependent DNA-specific endonuclease cas1 K15342 cas1; CRISP-associated protein Cas1
D Tph_c24390 cas1; CRISPR-associated metal-dependent DNA-specific endonuclease cas1 K15342 cas1; CRISP-associated protein Cas1
D Tph_c24380 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Tph_c18970 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Tph_c24410 cas3#; CRISPR-associated endonuclease Cas3-HD K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Tph_c18950 csa1; CRISPR-associated endonuclease Cas4/Csa1 K19085 csa1; CRISPR-associated protein Csa1
D Tph_c18960 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Tph_c24400 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Tph_c24370 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Tph_c24470 cas6; CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Tph_c24450 csh1; CRISPR-associated protein K19114 csh1; CRISPR-associated protein Csh1
D Tph_c24430 cas7; CRISPR-associated protein Cas7 K19115 csh2; CRISPR-associated protein Csh2
D Tph_c24420 cas5d; CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
D Tph_c24530 hypothetical protein K19134 csx10; CRISPR-associated protein Csx10
D Tph_c24540 CRISPR-associated RAMP superfamily protein K09002 csm3; CRISPR-associated protein Csm3
D Tph_c24550 CRISPR-associated hydrolase of the HD superfamily K19076 cmr2; CRISPR-associated protein Cmr2
D Tph_c04820 dam1; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07190 D12 class n6 adenine-specific DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c07930 dam2; adenine-specific DNA methyltransferase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Tph_c12780 adenine-specific DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Tph_c06100 cfrbiM: modification methylase K24451 zim; modification methylase
D Tph_c07700 kpnIM; modification methylase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Tph_c20820 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Tph_c24120 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Tph_c19410 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Tph_c03290 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Tph_c20830 AbrB/SpoV-like transcription regulator K07172 mazE; antitoxin MazE
D Tph_c19420 putative CopG-like DNA-binding protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tph_c03280 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tph_c02080 CopG-like transcriptional regulator K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Tph_c03070 transcriptional regulator K19156 prlF; antitoxin PrlF
D Tph_c04310 putative plasmid stabilization protein RelE/StbE K06218 relE; mRNA interferase RelE/StbE
D Tph_c21780 hypothetical protein K19159 yefM; antitoxin YefM
D Tph_c01960 hypothetical protein K18843 hicB; antitoxin HicB
D Tph_c03150 PilT-like protein K19686 vapC; ribonuclease VapC [EC:3.1.-.-]
D Tph_c12700 ftsZ1; cell division protein, tubulin FtsZ K03531 ftsZ; cell division protein FtsZ
D Tph_c05970 mreB1; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tph_c27130 mreB2; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Tph_c19200 iscS2; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c17300 iscS1; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Tph_c16970 AAA ATPase K19175 dptH; DNA phosphorothioation-dependent restriction protein DptH
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tpz01504]
D Tph_c24840 putative beta-lactamase-like protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:tpz00537]
D Tph_c11630 membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tpz03100]
D Tph_c13210 trnA1; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tph_c21400 trnA2; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tph_c26150 trnA3; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Tph_c29020 trnR5; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c00200 trnR1; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c14990 trnR4; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c00220 trnR2; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c04290 trnR3; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Tph_c24720 trnN1; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tph_c26120 trnN2; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Tph_c09840 trnD; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Tph_c09870 trnC; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Tph_c23700 trnQ2; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tph_c17620 trnQ1; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Tph_c26840 trnE2; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tph_c17610 trnE1; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Tph_c01930 trnG1; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tph_c09860 trnG3; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tph_c04280 trnG2; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Tph_c23710 trnH; tRNA-His K14226 tRNA-His; tRNA His
D Tph_c26160 trnI; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Tph_c04620 trnL1; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c18010 trnL5; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c11820 trnL3; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c15230 trnL4; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c09880 trnL2; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Tph_c23690 trnK2; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tph_c00900 trnK1; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Tph_c24710 trnM2; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c26850 trnM3; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c26860 trnM4; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c05000 trnM1; tRNA-Met K14230 tRNA-Met; tRNA Met
D Tph_c09850 trnF; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Tph_c09320 trnP2; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tph_c15520 trnP3; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tph_c04270 trnP1; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Tph_c00190 trnS1; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c29030 trnS3; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c29060 trnS4; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c00210 trnS2; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Tph_c05010 trnT2; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c21980 trnT3; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c04980 trnT1; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c22080 trnT4; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Tph_c13100 trnW; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Tph_c04990 trnY; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Tph_c14820 trnV2; tRNA-Val K14237 tRNA-Val; tRNA Val
D Tph_c09830 trnV1; tRNA-Val K14237 tRNA-Val; tRNA Val
D Tph_c24700 trnV3; tRNA-Val K14237 tRNA-Val; tRNA Val
D Tph_c00510 trnU; tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Tph_c13950 rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c26170 rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c18250 rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Tph_c13940 rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c26140 rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c18240 rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Tph_c13930 rrfA; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tph_c26130 rrfC; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Tph_c18230 rrfB; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Tph_c21720 yvgN; glyoxal reductase YvgN K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D Tph_c21730 yugJ; NADH-dependent butanol dehydrogenase YugJ K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Tph_c19650 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D Tph_c19640 acob; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D Tph_c26210 shikimate/quinate 5-dehydrogenase/glutamyl-tRNA reductase K14330 K14330; fatty aldehyde-generating acyl-ACP reductase [EC:1.2.1.80]
D Tph_c23790 iorA2; indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Tph_c04800 iorA1; indolepyruvate oxidoreductase subunit IorA K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Tph_c23780 iorB2; indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Tph_c04810 iorB1; indolepyruvate oxidoreductase subunit IorB K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Tph_c18450 ferredoxin-like protein K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D Tph_c08000 dfx; desulfoferrodoxin Dfx K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Tph_c07660 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Tph_c19220 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Tph_c12790 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein NrdG K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Tph_c25490 pflA2; pyruvate-formate lyase-activating enzyme PflA K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tph_c09610 pflA1; pyruvate formate-lyase-activating enzyme PflA K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tph_c13220 radical SAM domain containing protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Tph_c26280 hyfB; hydrogenase-4 component B K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D Tph_c26290 hyfC; hydrogenase-4 component C K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D Tph_c26300 hyfE; hydrogenase-4 membrane subunit E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D Tph_c26310 hyfF; hydrogenase-4 membranbe subunit F K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D Tph_c21880 nitrilase/cyanide hydratase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Tph_c20200 glycosyl transferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D Tph_c00370 phosphoribosylaminoimidazole carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Tph_c18490 lgt; prolipoprotein diacylglyceryl transferase Lgt K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Tph_c09970 Dak phosphatase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Tph_c05790 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Tph_c10450 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Tph_c11760 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Tph_c03820 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D Tph_c19750 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Tph_c16030 spoIIAB: anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D Tph_c03710 aTP; guanido phosphotransferase ATP K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D Tph_c13460 hypothetical protein UPF0189 K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Tph_c26830 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D Tph_c02580 ywqE; tyrosine-protein phosphatase YwqE K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D Tph_c11640 metal-dependent phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Tph_c16730 HAD-superfamily phosphatase subfamily IIIA K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Tph_c10470 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Tph_c10480 hypothetical protein K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Tph_c13480 hypothetical protein DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Tph_c00770 RecJ-like phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D Tph_c22730 metal dependent phosphohydrolase, 7TM-HD domain protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Tph_c28720 yabD; deoxyribonuclease YabD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Tph_c23010 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c02620 amyB1; amylopullulanase AmyB K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c12000 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Tph_c27030 dan2; D-aminoacylase Dan K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D Tph_c14290 def; peptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Tph_c13630 polysaccharide deacetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D Tph_c27510 protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D Tph_c28660 splB; spore photoproduct lyase SplB K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D Tph_c18570 carbohydrate kinase-like protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Tph_c19240 carbohydrate kinase-like protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Tph_c01880 hypothetical protein K16188 ytpB; tetraprenyl-beta-curcumene synthase [EC:4.2.3.130]
D Tph_c08290 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Tph_c00360 hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Tph_c22230 kamA; L-lysine 2,3-aminomutase KamA K19814 eam; glutamate 2,3-aminomutase [EC:5.4.3.9]
D Tph_c09670 hgdC1; activator of (R)-2-hydroxyglutaryl-CoA dehydratase HgdC K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D Tph_c28390 cphA; cyanophycin synthetase CphA K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D Tph_c00060 yloB; calcium-transporting ATPase YloB K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Tph_c14520 cadA; cadmium, zinc and cobalt-transporting ATPase CadA K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Tph_c00500 acuB; acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D Tph_c19910 rubrerythrin K19824 fprB; rubrerythrin
D Tph_c22360 fdhD3; formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein
D Tph_c01670 fdhD1; formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein
D Tph_c01740 fdhD2; formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein
D Tph_c08140 fdxA; 4Fe-4S ferredoxin iron-sulfur binding protein K05337 fer; ferredoxin
D Tph_c26340 hyfH; formate hydrogenlyase complex iron-sulfur protein HyfH K12143 hyfH; hydrogenase-4 component H
D Tph_c19210 nifU; NIF system FeS cluster assembly protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Tph_c23460 NifU-like Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D Tph_c26330 hycE; formate hydrogenlyase subunit 5 K15830 hycE; formate hydrogenlyase subunit 5
D Tph_c26350 hycG; formate hydrogenlyase subunit 7 K15832 hycG; formate hydrogenlyase subunit 7
D Tph_c10560 gvpN; gas vesicle protein GvpN K04748 norQ; nitric oxide reductase NorQ protein
D Tph_c08710 nifB; FeMo cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB
D Tph_c08700 nifD2; nitrogenase molybdenum-iron protein alpha subunit K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Tph_c21360 putative ech hydrogenase subunit A K14086 echA; ech hydrogenase subunit A
D Tph_c21350 putative ech hydrogenase subunit B K14087 echB; ech hydrogenase subunit B
D Tph_c21340 putative ech hydrogenase subunit C K14088 echC; ech hydrogenase subunit C
D Tph_c21330 putative ech hydrogenase subunit D K14089 echD; ech hydrogenase subunit D
D Tph_c21320 putative ech hydrogenase subunit E K14090 echE; ech hydrogenase subunit E
D Tph_c21310 putative ech hydrogenase subunit F K14091 echF; ech hydrogenase subunit F
D Tph_c16010 dodecin flavoprotein K09165 K09165; dodecin
C 99983 Lipid metabolism
D Tph_c15210 degV; DegV K25232 fakB; fatty acid kinase fatty acid binding subunit
D Tph_c18660 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Tph_c07070 eutH; ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D Tph_c07000 eutJ; ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ
D Tph_c06960 eutL; ethanolamine utilization protein EutL K04026 eutL; ethanolamine utilization protein EutL
D Tph_c06900 ethanolamine/propanediol utilization protein K04029 eutP; ethanolamine utilization protein EutP
D Tph_c06870 eutS; ethanolamine utilization protein EutS K04031 eutS; ethanolamine utilization protein EutS
D Tph_c12830 pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Tph_c12450 hypothetical protein DUF1049 K08992 lapA; lipopolysaccharide assembly protein A
D Tph_c22300 sleB2; spore cortex-lytic enzyme SleB K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D Tph_c15200 ABC-1-like protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D Tph_c09720 mobB3; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D Tph_c01490 mobB1; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D Tph_c01760 mobB2; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D Tph_c07030 putative NADH:ubiquinone oxidoreductase K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Tph_c24870 cspC; cold shock protein CspC K03704 cspA; cold shock protein
D Tph_c06450 cspB; cold shock protein CspB K03704 cspA; cold shock protein
D Tph_c26360 hycH; formate hydrogenlyase maturation protein HycH K15834 hycH; formate hydrogenlyase maturation protein HycH
D Tph_c08660 nifI1; nitrogen regulatory protein PII K02589 nifHD1; nitrogen regulatory protein PII 1
D Tph_c08670 nifI2; nitrogen regulatory protein PII K02590 nifHD2; nitrogen regulatory protein PII 2
D Tph_c14350 hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D Tph_c00040 hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
C 99975 Protein processing
D Tph_c03700 putative UvrB/UvrC protein K19411 mcsA; protein arginine kinase activator
D Tph_c04630 tig; trigger factor Tig K03545 tig; trigger factor
D Tph_c15370 putative formate dehydrogenase formation protein K02380 fdhE; FdhE protein
D Tph_c07150 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D Tph_c09190 hypC; hydrogenase assembly chaperone HypC K04653 hypC; hydrogenase expression/formation protein HypC
D Tph_c09200 hypD; hypD hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Tph_c09210 hypE1; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Tph_c17890 hypE2; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Tph_c09180 hypF; (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Tph_c10400 Mg chelatase subunit ChlI K07391 comM; magnesium chelatase family protein
D Tph_c01130 resB; cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D Tph_c01520 xdhC; putative xanthine dehydrogenase accessory factor XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D Tph_c03970 nfeD; nodulation efficiency protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Tph_c12050 adenine-specific DNA methylase K07445 K07445; putative DNA methylase
D Tph_c00870 resolvase K07450 K07450; putative resolvase
D Tph_c05960 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Tph_c21050 putative endonuclease K07457 K07457; endonuclease III related protein
D Tph_c10340 endonuclease K07460 yraN; putative endonuclease
D Tph_c10710 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D Tph_c15050 DnaD/DnaB domain-containing replication protein K02086 dnaD; DNA replication protein
D Tph_c17310 rarA; recombination protein RarA K07478 ycaJ; putative ATPase
D Tph_c02070 putative transposase K07481 K07481; transposase, IS5 family
D Tph_c23310 hypothetical protein, terminase-like protein K07483 K07483; transposase
D Tph_c24170 transposase K07483 K07483; transposase
D Tph_c12230 transposase IS3/IS911 family K07483 K07483; transposase
D Tph_c14190 transposase, IS3/IS911 family K07483 K07483; transposase
D Tph_c06890 IS3/IS91-like transposase K07483 K07483; transposase
D Tph_c07920 transposase, IS3/IS911 family K07483 K07483; transposase
D Tph_c24270 transposase K07484 K07484; transposase
D Tph_c24290 putative IS66-like transposase K07484 K07484; transposase
D Tph_c06310 putative IS66-like transposase K07484 K07484; transposase
D Tph_c06330 putative IS66-like transposase K07484 K07484; transposase
D Tph_c17630 transposase IS204/IS1001/IS1096/IS1165 K07485 K07485; transposase
D Tph_c20110 IS116/IS110/IS902-like transposase K07486 K07486; transposase
D Tph_c24210 transposase IS116/IS110/IS902 family K07486 K07486; transposase
D Tph_c24250 transposase K07486 K07486; transposase
D Tph_c12240 transposase IS116/IS110/IS902 family K07486 K07486; transposase
D Tph_c02590 IS200-like transposase K07491 rayT; REP-associated tyrosine transposase
D Tph_c04340 transposase, IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Tph_c04580 transposase, IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Tph_c19670 tnp2; transposase Tnp K07493 K07493; putative transposase
D Tph_c22050 tnp3; transposase for insertion sequence element IS256 in transposon Tn4001 K07493 K07493; putative transposase
D Tph_c03340 tnp1; transposase Tnp K07493 K07493; putative transposase
D Tph_c27090 tnp4; transposase Tnp K07493 K07493; putative transposase
D Tph_c13830 transposase IS256 K07493 K07493; putative transposase
D Tph_c17480 transposase mutator type K07493 K07493; putative transposase
D Tph_c02600 IS605-like transposase K07496 K07496; putative transposase
D Tph_c04350 putative transposase, IS891/IS1136/IS1341 family protein K07496 K07496; putative transposase
D Tph_c04590 putative transposase IS891/IS1136/IS1341 family K07496 K07496; putative transposase
D Tph_c17600 transposase IS605 OrfB family K07496 K07496; putative transposase
D Tph_c14770 transposase K07497 K07497; putative transposase
D Tph_c06880 transposase K07497 K07497; putative transposase
D Tph_c12220 transposase IS3/IS911 family K07497 K07497; putative transposase
D Tph_c07910 hypothetical protein, terminase-like protein K07497 K07497; putative transposase
D Tph_c14200 hypothetical protein K07497 K07497; putative transposase
D Tph_c23300 transposase K07497 K07497; putative transposase
D Tph_c24180 transposase K07497 K07497; putative transposase
D Tph_c14160 mu transposase, core domain family K07497 K07497; putative transposase
D Tph_c07720 insK; transposase InsK K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Tph_c03900 pspA; phage shock protein PspA K03969 pspA; phage shock protein A
D Tph_c28470 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D Tph_c29000 YbaB/EbfC-like DNA-binding protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Tph_c27650 caiT; L-carnitine/gamma-butyrobetaine antiporter CaiT K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D Tph_c20330 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Tph_c04760 putative Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Tph_c18630 agcS; alanine or glycine: cation symporter AgcS K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Tph_c05590 yxlA; permease for cytosine/purines, uracil, thiamine, allantoin K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Tph_c27040 nucleobase permease protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D Tph_c27590 AspT/YidE/YbjL-like protein K07085 K07085; putative transport protein
C 99978 Cell growth
D Tph_c15150 acsF; carbon monoxide dehydrogenase nickel-insertion accessory protein AcsF K07321 cooC; CO dehydrogenase maturation factor
D Tph_c15190 cooC2; carbon monoxide dehydrogenase accessory protein CooC K07321 cooC; CO dehydrogenase maturation factor
D Tph_c01050 cooC1; CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC K07321 cooC; CO dehydrogenase maturation factor
D Tph_c28970 bofA; pro-sigmaK processing inhibitor K06317 bofA; inhibitor of the pro-sigma K processing machinery
D Tph_c20910 cotJB; spore coat peptide assembly protein CotJB K06333 cotJB; spore coat protein JB
D Tph_c20900 cotJC; spore coat peptide assembly protein CotJC K06334 cotJC; spore coat protein JC
D Tph_c00280 jag; protein Jag K06346 jag; spoIIIJ-associated protein
D Tph_c15860 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D Tph_c15850 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D Tph_c16040 spoIIAA: anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D Tph_c16100 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D Tph_c21210 spoIIP1; stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D Tph_c15650 spoIIP; stage II sporulation protein P K06385 spoIIP; stage II sporulation protein P
D Tph_c12740 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D Tph_c28420 spoIIR1; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D Tph_c16460 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D Tph_c16450 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D Tph_c16440 spoIIIAC; stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D Tph_c16430 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D Tph_c16420 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D Tph_c16410 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D Tph_c16400 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D Tph_c16390 spoIIIAH; stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D Tph_c15570 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D Tph_c16790 cisA1; DNA recombinase CisA K06400 spoIVCA; site-specific DNA recombinase
D Tph_c19940 cisA2; DNA recombinase CisA K06400 spoIVCA; site-specific DNA recombinase
D Tph_c22970 resolvase K06400 spoIVCA; site-specific DNA recombinase
D Tph_c22990 recombinase K06400 spoIVCA; site-specific DNA recombinase
D Tph_c23370 resolvase K06400 spoIVCA; site-specific DNA recombinase
D Tph_c07850 yokA; resolvase YokA K06400 spoIVCA; site-specific DNA recombinase
D Tph_c07870 resolvase K06400 spoIVCA; site-specific DNA recombinase
D Tph_c16000 spoVAC; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D Tph_c15990 spoVAD; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D Tph_c15980 spoVAE; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D Tph_c11430 spoVFA; spoVFA: dipicolinate synthase subunit A K06410 spoVFA; dipicolinate synthase subunit A
D Tph_c11440 spoVFB; spoVFB: dipicolinate synthase subunit B K06411 spoVFB; dipicolinate synthase subunit B
D Tph_c07250 spoVG1; septation protein K06412 spoVG; stage V sporulation protein G
D Tph_c28350 spoVG; stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
D Tph_c13790 spoVK; stage V sporulation protein K K06413 spoVK; stage V sporulation protein K
D Tph_c10150 spoVS1; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D Tph_c11620 spoVS2; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D Tph_c09990 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D Tph_c10000 small acid-soluble spore protein alpha/beta type K06421 sspD; small acid-soluble spore protein D (minor alpha/beta-type SASP)
D Tph_c14860 small acid-soluble spore protein K06423 sspF; small acid-soluble spore protein F (minor alpha/beta-type SASP)
D Tph_c28630 yabG; sporulation-specific protease YabG K06436 yabG; spore coat assemly protein
D Tph_c22750 yqfd; sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D Tph_c08770 gerKA1; spore germination protein KA K06295 gerKA; spore germination protein KA
D Tph_c09060 gerKA2; spore germination protein KA K06295 gerKA; spore germination protein KA
D Tph_c08790 gerKC1; spore germination protein KC K06297 gerKC; spore germination protein KC
D Tph_c09040 gerKC3; spore germination protein KC K06297 gerKC; spore germination protein KC
D Tph_c04090 spore germination protein GerMN K06298 gerM; germination protein M
D Tph_c22290 ypeB; spore germination YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
C 99995 Signaling proteins
D Tph_c12910 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D Tph_c22740 phoH; putative AAA+ type ATPase PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Tph_c27940 kaiC2; circadian clock protein kinase KaiC K08482 kaiC; circadian clock protein KaiC
C 99992 Structural proteins
D Tph_c20490 RND-like efflux transporter K02005 ABC.CD.TX; HlyD family secretion protein
D Tph_c23650 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Tph_c10640 gvpA4; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
D Tph_c10520 gvpA1; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
D Tph_c10610 gvpA3; gas vesicle structural protein GvpA K23262 gvpA; gas vesicle structural protein
D Tph_c07040 microcompartment protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D Tph_c04870 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D Tph_c26390 molybdopterin biosynthesis protein K07219 K07219; putative molybdopterin biosynthesis protein
D Tph_c08320 moeA4; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Tph_c13530 transport protein K04065 osmY; hyperosmotically inducible periplasmic protein
D Tph_c05910 PHP domain-containing protein K04477 ycdX; putative hydrolase
D Tph_c28530 hypothetical protein K07001 K07001; NTE family protein
D Tph_c00630 phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase
D Tph_c22870 hypothetical protein K08972 K08972; putative membrane protein
D Tph_c28290 hypothetical protein K08972 K08972; putative membrane protein
C 99997 Function unknown
D Tph_c03450 radical SAM domain-containing protein K06871 K06871; uncharacterized protein
D Tph_c28110 radical SAM domain-containing protein K06871 K06871; uncharacterized protein
D Tph_c02820 metal-dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Tph_c03330 putative metal-dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Tph_c14740 ATPase K06921 K06921; uncharacterized protein
D Tph_c24680 AAA+-like ATPase K06923 K06923; uncharacterized protein
D Tph_c23470 putative DNA-binding protein K06933 K06933; uncharacterized protein
D Tph_c06400 hypothetical protein K06933 K06933; uncharacterized protein
D Tph_c26770 hypothetical protein K06950 K06950; uncharacterized protein
D Tph_c10240 nucleic acid binding protein K06960 K06960; uncharacterized protein
D Tph_c04960 hypothetical protein K06962 K06962; uncharacterized protein
D Tph_c01470 pyridoxamine 5'-phosphate oxidase-like protein K07006 K07006; uncharacterized protein
D Tph_c04110 putative acetate transporter K07034 K07034; uncharacterized protein
D Tph_c04060 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Tph_c19090 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Tph_c03190 hypothetical protein K07064 K07064; uncharacterized protein
D Tph_c01970 PilT-like protein K07064 K07064; uncharacterized protein
D Tph_c02980 PilT-like protein K07064 K07064; uncharacterized protein
D Tph_c06220 putative PIN domain containing protein K07064 K07064; uncharacterized protein
D Tph_c01020 hypothetical protein K07065 K07065; uncharacterized protein
D Tph_c01100 PilT-like protein K07065 K07065; uncharacterized protein
D Tph_c01940 PilT-like protein K07065 K07065; uncharacterized protein
D Tph_c07970 putative nucleotidyltransferase K07075 K07075; uncharacterized protein
D Tph_c18620 aldo/keto reductase K07079 K07079; uncharacterized protein
D Tph_c16920 aldo/keto reductase K07079 K07079; uncharacterized protein
D Tph_c19190 NIF system FeS cluster assembly protein K07089 K07089; uncharacterized protein
D Tph_c13300 tauE; sulfoacetat exporter TauE K07090 K07090; uncharacterized protein
D Tph_c04160 yfcE1; phosphodiesterase YfcE K07095 K07095; uncharacterized protein
D Tph_c14010 yfcE2; putative phosphodiesterase YfcE K07095 K07095; uncharacterized protein
D Tph_c26570 metallophosphoesterase K07098 K07098; uncharacterized protein
D Tph_c19260 hypothetical protein K07112 K07112; uncharacterized protein
D Tph_c07580 serine threonine protein phosphatase 5 K07126 K07126; uncharacterized protein
D Tph_c00860 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D Tph_c22440 hypothetical protein K07150 K07150; uncharacterized protein
D Tph_c11670 hypothetical protein CoxE-like protein K07161 K07161; uncharacterized protein
D Tph_c11740 hypothetical protein CoxE-like protein K07161 K07161; uncharacterized protein
D Tph_c10390 hypothetical protein DUF151 K08999 K08999; uncharacterized protein
D Tph_c09420 hypothetical protein DUF763 K09003 K09003; uncharacterized protein
D Tph_c05530 hypothetical protein K09005 K09005; uncharacterized protein
D Tph_c22770 aspartyl/glutamyl-tRNA amidotransferase, subunit B K09117 K09117; uncharacterized protein
D Tph_c00600 hypothetical protein K09118 K09118; uncharacterized protein
D Tph_c04030 hypothetical protein K09126 K09126; uncharacterized protein
D Tph_c12870 hypothetical protein CHP00251 K09131 K09131; uncharacterized protein
D Tph_c13420 putative nitrgene regulatory protein PII/ATP phosphoribosyltransferase K09137 K09137; uncharacterized protein
D Tph_c01540 hypothetical protein K09138 K09138; uncharacterized protein
D Tph_c06120 hypothetical protein DUF364 K09138 K09138; uncharacterized protein
D Tph_c12920 hypothetical protein DUF711 K09157 K09157; uncharacterized protein
D Tph_c08520 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein
D Tph_c12400 metal dependent phosphohydrolase K09163 K09163; uncharacterized protein
D Tph_c02830 hypothetical protein K09388 K09388; uncharacterized protein
D Tph_c17120 hypothetical protein DUF917 K09703 K09703; uncharacterized protein
D Tph_c28650 hypothetical protein K09706 K09706; uncharacterized protein
D Tph_c18140 apbE; thiamine synthesis protein ApbE K09740 K09740; uncharacterized protein
D Tph_c04900 hypothetical protein K09749 K09749; uncharacterized protein
D Tph_c11110 putative polymerase K09749 K09749; uncharacterized protein
D Tph_c04080 hypothetical protein K09764 K09764; uncharacterized protein
D Tph_c16810 hypothetical protein DUF2225 K09766 K09766; uncharacterized protein
D Tph_c28060 hypothetical protein K09775 K09775; uncharacterized protein
D Tph_c28680 hypothetical protein K09776 K09776; uncharacterized protein
D Tph_c24080 hypothetical protein K09779 K09779; uncharacterized protein
D Tph_c13680 hypothetical protein DUF456 K09793 K09793; uncharacterized protein
D Tph_c24140 hypothetical protein K09803 K09803; uncharacterized protein
D Tph_c20930 bp26: periplasmic immunogenic protein K09807 K09807; uncharacterized protein
D Tph_c09160 hypothetical protein K09942 K09942; uncharacterized protein
D Tph_c15640 seaA; sporulation protein SeaA K05739 seaA; uncharacterized protein
D Tph_c21590 hypothetical protein K07584 ysxB; uncharacterized protein
D Tph_c11290 hypothetical protein DUF448 K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024