+D #

  Transfer RNA Biogenesis - Vibrio anguillarum NB10

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AEukaryotic type B 5'processing factors C Ribonucrease P B 3'processing and CCA adding factors C 3'processing factors C CCA adding factors D VANGNB10_cI2210 cca; Multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonuclease complex C tRNA splicing ligase complex C Other tRNA splicing factors B tRNA transport factors C tRNA export factors C tRNA import factors B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D VANGNB10_cI2008c gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D VANGNB10_cI0755c proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D VANGNB10_cI0609 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D VANGNB10_cI0831c leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D VANGNB10_cI0913c metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D VANGNB10_cI0868 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D VANGNB10_cI1885 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D VANGNB10_cI0563 lysU; lysyl-tRNA synthetase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D VANGNB10_cI1107 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] C Other AARSs D VANGNB10_cI0450 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D VANGNB10_cI1401 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D VANGNB10_cII0346 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D VANGNB10_cI1731c serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D VANGNB10_cI1676c cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D VANGNB10_cI2258 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D VANGNB10_cI0674 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D VANGNB10_cI1549c pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D VANGNB10_cI1548c pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D VANGNB10_cII0229c tyrS1; Tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D VANGNB10_cI0529 tyrS-2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D VANGNB10_cI2377c trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C Trans-editing factors D VANGNB10_cI0148 dtd; D-tyrosyl-tRNA(tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] C AARS associated factors D VANGNB10_cI1720c hinT; histidine triad nucleotide-binding protein,(HINT1) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] B tRNA modification factors C Deaminases C Dihydorouridine synthases C Methylthiotransferase C Methyltransferases D VANGNB10_cI0327 trmB; tRNA (guanine-n(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D VANGNB10_cI0756c putative uncharacterized protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] C Psudouridine synthases D VANGNB10_cI0870 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D VANGNB10_cI0544 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D VANGNB10_cI0436 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] C Thiolation factors D VANGNB10_cI0663 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C KEOPS/EKC complex C Elongator complex C Elongator related proteins C Other tRNA modification factors D VANGNB10_cI0063 rimN; Putative ribosome maturation factor rimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D VANGNB10_cI0229 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D VANGNB10_cI0002c trmE; Putative tRNA modification GTP-ase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D VANGNB10_cI2711c gidA1; glucose inhibited division protein A family K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme B tRNA degradation factors C TRAMP complex C Rapid tRNA decay (RTD) pathway factors D VANGNB10_cI0166c cysQ; CysQ protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] C Other tRNA degradation factors # AProkaryotic type B 5'processing factors C Ribonucrease P D VANGNB10_cI0005c rnpA; ribonuclease P protein component (RNase P protein). K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] B 3'processing and CCA adding factors C 3'processing factors D VANGNB10_cI0877c rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D VANGNB10_cI2554c rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D VANGNB10_cII0344c rnb; Ribonuclease II/ribonuclease R K01147 rnb; exoribonuclease II [EC:3.1.13.1] D VANGNB10_cI0950 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] C CCA adding factors D VANGNB10_cI2210 cca; Multifunctional CCA protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B tRNA spricing factors C tRNA splicing endonucleases C tRNA splicing ligases C Other tRNA splicing factors B tRNA transport factors C tRNA export factors D VANGNB10_cI0624c ABC transporter protein, ATP-binding component K06020 ettA; energy-dependent translational throttle protein EttA B Aminoacyl-tRNA synthetases (AARSs) C Multi-aminoacyl-tRNA synthetase complex (MSC) D VANGNB10_cI0831c leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D VANGNB10_cI0755c proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] C Other AARSs D VANGNB10_cII0229c tyrS1; Tyrosyl-tRNA synthetase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D VANGNB10_cI0529 tyrS-2; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D VANGNB10_cI2377c trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D VANGNB10_cII0346 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D VANGNB10_cI0609 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D VANGNB10_cI0563 lysU; lysyl-tRNA synthetase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D VANGNB10_cI0450 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D VANGNB10_cI2258 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D VANGNB10_cI0913c metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D VANGNB10_cI1731c serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D VANGNB10_cI1107 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D VANGNB10_cI0018c glyQ; glycine-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D VANGNB10_cI0017c glyS; glycine-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D VANGNB10_cI1676c cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D VANGNB10_cI2008c gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D VANGNB10_cI0868 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D VANGNB10_cI1885 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D VANGNB10_cI1549c pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D VANGNB10_cI1548c pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D VANGNB10_cI0674 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D VANGNB10_cI1401 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D VANGNB10_cI0495c gluQ; Glutamyl-Q tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] C Trans-editing factors D VANGNB10_cI0148 dtd; D-tyrosyl-tRNA(tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D VANGNB10_cI1972c Putative uncharacterized protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] B tRNA modification factors C Deaminases D VANGNB10_cI0748 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] C Dihydorouridine synthases D VANGNB10_cI0258 dusA; tRNA-dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D VANGNB10_cI2468 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D VANGNB10_cI1735 dusC; translocase SecA subunit K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] C Methylthiotransferases D VANGNB10_cI0837c miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase miaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] C Methyltransferases D VANGNB10_cI1104c cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D VANGNB10_cI1103c cmoB; putative methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D VANGNB10_cI1096 smtA; Protein smtA, SAM-dependent methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D VANGNB10_cI0118c trmA; tRNA (uracil-5)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D VANGNB10_cI0327 trmB; tRNA (guanine-n(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D VANGNB10_cI0466 trmD; tRNA(guanine-N1)methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D VANGNB10_cI0002c trmE; Putative tRNA modification GTP-ase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D VANGNB10_cI0661 trmJ; Putative tRNA/rRNA methyltransferase (TrmH family) protein K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D VANGNB10_cI0176 Putative uncharacterized protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217] D VANGNB10_cI2442 yibK; hypothetical tRNA/rRNA methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D VANGNB10_cI0756c putative uncharacterized protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D VANGNB10_cI0560c tRNA (adenine-N(6)-)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D VANGNB10_cII0813c Putative uncharacterized protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D VANGNB10_cII0547c RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family C Psudouridine synthases D VANGNB10_cI0870 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D VANGNB10_cI0544 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D VANGNB10_cI0764 truC; tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D VANGNB10_cI0436 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D VANGNB10_cII0067c Putative RNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D VANGNB10_cI1134 RNA pseudouridine synthase (23S rRNA and tRNA) K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D VANGNB10_cI2260c rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] C Thiolation factors D VANGNB10_cI1062c trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D VANGNB10_cI1280 ttcA; tRNA 2-thiocytidine biosynthesis protein ttcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D VANGNB10_cI0021c tusA; Sulfurtransferase tusA homolog K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D VANGNB10_cI0240 putative uncharacterized protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B D VANGNB10_cI0239 putative uncharacterized protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D VANGNB10_cI0238 tusD; sulfurtransferase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D VANGNB10_cI1235c Putative sulfite reductase, gamma subunit-related protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D VANGNB10_cI0665 iscA; iron-binding protein IscA (iron-sulfur cluster assembly protein) K13628 iscA; iron-sulfur cluster assembly protein D VANGNB10_cI0663 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D VANGNB10_cI2231 ygfZ; tRNA-modifying protein, YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ C KEOPS/EKC complex C Other tRNA modification factors D VANGNB10_cI2711c gidA1; glucose inhibited division protein A family K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D VANGNB10_cI0229 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D VANGNB10_cI1918 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D VANGNB10_cI0655 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D VANGNB10_cI1227 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D VANGNB10_cI1399c queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D VANGNB10_cI1226 putative uncharacterized protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D VANGNB10_cI0778c queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D VANGNB10_cI0225c putative ferredoxin, iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D VANGNB10_cI0656 tgt; queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D VANGNB10_cI0770 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D VANGNB10_cI2030c tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D VANGNB10_cII1015c putative uncharacterized protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D VANGNB10_cI0945 Putative uncharacerized glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D VANGNB10_cI0063 rimN; Putative ribosome maturation factor rimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D VANGNB10_cI0427 gcp; O-sialoglycoprotein endopeptidase (glycoprotease) K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D VANGNB10_cI0226 putative uncharacterized protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D VANGNB10_cI2095c Putative membrane protein (HesA/MoeB/ThiF family) K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase B tRNA degradation factors C VANGNB10_cI2353c rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C VANGNB10_cI0546 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024