+D GENES KO
#
KEGG Orthology (KO) - Yersinia pestis D182038
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ypx00010]
D YPD8_2603 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPD8_3093 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPD8_0085 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YPD8_0756 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_3485 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_0081 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YPD8_1652 glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YPD8_0755 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YPD8_1141 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPD8_0395 gpmB; phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPD8_0062 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YPD8_2958 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPD8_1726 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_1488 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_1502 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YPD8_3003 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPD8_3002 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_1434 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YPD8_1613 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPD8_1632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPD8_0225 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPD8_1139 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YPD8_0027 phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D YPD8_2347 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPD8_1653 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D YPD8_0125 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YPD8_0153 putative glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPD8_1034 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPD8_2618 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPD8_2122 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ypx00020]
D YPD8_1166 citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D YPD8_1341 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YPD8_2999 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YPD8_2089 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YPD8_1161 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YPD8_1160 sucB; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_1158 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YPD8_1159 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YPD8_1164 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_1162 sdhB; succinate dehydrogenase catalytic subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_1165 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YPD8_0314 frdA; fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_0313 frdB; succinate dehydrogenase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_0312 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D YPD8_0311 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D YPD8_2922 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YPD8_1382 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YPD8_3090 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPD8_0125 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YPD8_3003 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPD8_3002 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPD8_1434 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ypx00030]
D YPD8_1724 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YPD8_1128 hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D YPD8_1575 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YPD8_0142 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YPD8_0752 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPD8_2900 C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPD8_2901 putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPD8_0403 talB; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D YPD8_1003 rpiA; putative ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D YPD8_0761 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D YPD8_2936 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YPD8_0376 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YPD8_0972 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YPD8_3225 putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YPD8_3226 carbohydrate kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YPD8_0008 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YPD8_0379 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YPD8_2347 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPD8_3046 phnN; PhnN protein K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D YPD8_1772 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YPD8_2173 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D YPD8_1723 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YPD8_3596 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPD8_2166 idnK; putative thermosensitive gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YPD8_3479 putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YPD8_3516 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D YPD8_0756 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_3485 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_3093 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPD8_0085 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ypx00040]
D YPD8_0366 pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YPD8_3520 pelY; periplasmic pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YPD8_2019 pelW; exopolygalacturonate lyase K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D YPD8_2029 ogl; oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D YPD8_2017 kduI; 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D YPD8_2018 kduD1; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D YPD8_0827 kduD2; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D YPD8_0509 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D YPD8_0510 uxaB; tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D YPD8_0511 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D YPD8_1011 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D YPD8_1012 D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D YPD8_1637 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPD8_1576 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_1577 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_2921 sgbK; putative L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D YPD8_2920 sgbU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D YPD8_1350 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPD8_2913 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPD8_0142 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YPD8_1370 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D YPD8_1371 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D YPD8_1004 putative carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YPD8_3560 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YPD8_3559 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YPD8_0291 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YPD8_0289 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D YPD8_1426 dalD; putative mannitol dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D YPD8_3486 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D YPD8_3211 putative carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:ypx00051]
D YPD8_2806 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YPD8_1380 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YPD8_2218 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPD8_2709 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPD8_2711 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YPD8_2713 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YPD8_2714 hypothetical protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YPD8_2712 wcaG; nucleotide di-P-sugar epimerase or dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YPD8_1550 hypothetical protein K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D YPD8_1552 putative oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D YPD8_1551 putative hydrolase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D YPD8_0290 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D YPD8_0291 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YPD8_0289 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPD8_3093 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPD8_0085 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YPD8_3587 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D YPD8_0997 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YPD8_3559 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YPD8_1426 dalD; putative mannitol dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D YPD8_0756 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_3485 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_0081 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YPD8_2936 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YPD8_0996 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YPD8_1998 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPD8_1999 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPD8_2000 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPD8_3588 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YPD8_2146 haloacid dehalogenase-like hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D YPD8_1534 phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:ypx00052]
D YPD8_1139 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D YPD8_1138 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YPD8_1137 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YPD8_1136 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YPD8_1576 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_1577 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_2347 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPD8_2603 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPD8_2079 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YPD8_0813 bgaB; puative beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D YPD8_1537 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPD8_0822 agaY; tagatose 1,6-diphosphate aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D YPD8_0835 agaZ; putative tagatose 6-phosphate kinase K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D YPD8_0818 glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPD8_2795 maltodextrin glucosidase (Alpha-glucosidase) K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPD8_2798 maltodextrin glucosidase (Alpha-glucosidase) K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPD8_0829 hypothetical protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YPD8_0832 manX; putative PTS transport protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YPD8_0831 putative PTS permease protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YPD8_0830 putative PTS permease protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YPD8_0828 putative acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YPD8_0833 phosphosugar isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:ypx00053]
D YPD8_1637 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPD8_2140 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YPD8_2503 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D YPD8_2920 sgbU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D YPD8_1350 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPD8_2913 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPD8_2921 sgbK; putative L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
C 00500 Starch and sucrose metabolism [PATH:ypx00500]
D YPD8_0818 glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPD8_2795 maltodextrin glucosidase (Alpha-glucosidase) K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPD8_2798 maltodextrin glucosidase (Alpha-glucosidase) K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPD8_1576 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_1577 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_0540 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPD8_2490 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPD8_2343 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YPD8_2341 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YPD8_2342 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YPD8_0153 putative glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPD8_1034 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPD8_2723 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YPD8_3470 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D YPD8_3469 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YPD8_3472 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YPD8_3468 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YPD8_0114 Glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YPD8_3471 glgX; glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D YPD8_3597 malS; periplasmic alpha-amylase precursor K01176 AMY; alpha-amylase [EC:3.2.1.1]
D YPD8_0115 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D YPD8_2618 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPD8_3158 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YPD8_3159 treC; putative trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D YPD8_2347 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPD8_2603 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPD8_2806 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ypx00520]
D YPD8_2115 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YPD8_2304 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YPD8_2618 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPD8_2299 pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YPD8_2297 nagA; putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YPD8_2298 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D YPD8_2806 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YPD8_3631 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YPD8_3076 mrsA; probable phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D YPD8_3632 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YPD8_2387 hypothetical protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D YPD8_1468 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D YPD8_3138 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YPD8_3311 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YPD8_2640 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D YPD8_2643 hypothetical protein K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D YPD8_2644 probable N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D YPD8_3410 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YPD8_3409 rffD; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YPD8_1513 hypothetical protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YPD8_1515 conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPD8_1514 pmrF; probable glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D YPD8_1512 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YPD8_2122 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YPD8_2603 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPD8_2347 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPD8_1576 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_1577 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_1637 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPD8_1138 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YPD8_1137 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YPD8_1136 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YPD8_1998 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPD8_1999 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPD8_2000 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPD8_1380 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YPD8_2218 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPD8_2709 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPD8_2711 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YPD8_2713 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YPD8_2714 hypothetical protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YPD8_2712 wcaG; nucleotide di-P-sugar epimerase or dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YPD8_2723 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YPD8_2722 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D YPD8_2721 ddhC; putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D YPD8_2724 ddhD; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D YPD8_2720 prt; paratose synthase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D YPD8_3470 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ypx00620]
D YPD8_0225 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPD8_1434 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YPD8_3003 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPD8_3002 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_0919 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YPD8_1632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPD8_1613 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPD8_2143 ackA; acetate/propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YPD8_2142 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPD8_1726 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_1488 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_1227 accA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YPD8_3194 accB; acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YPD8_3195 accC; acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YPD8_2517 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YPD8_1549 lldD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D YPD8_0942 poxB; pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D YPD8_1429 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D YPD8_1101 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D YPD8_1476 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D YPD8_1247 gloB; putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YPD8_0896 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YPD8_3596 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPD8_1604 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YPD8_2653 phosphate acetyltransferase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D YPD8_3090 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPD8_2922 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YPD8_1382 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D YPD8_0314 frdA; fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_0313 frdB; succinate dehydrogenase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_0312 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D YPD8_0311 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D YPD8_3463 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YPD8_0125 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YPD8_1502 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YPD8_3279 aceB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D YPD8_0468 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ypx00630]
D YPD8_3278 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D YPD8_0225 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPD8_3279 aceB; malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D YPD8_3090 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPD8_1166 citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D YPD8_1341 aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YPD8_2999 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YPD8_1074 catalase K03781 katE; catalase [EC:1.11.1.6]
D YPD8_3596 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPD8_0143 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YPD8_0025 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPD8_2404 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPD8_0771 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YPD8_0769 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_0770 gcsH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D YPD8_3505 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YPD8_2206 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YPD8_1723 eda; keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YPD8_3578 hypothetical protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YPD8_3579 Twin-arginine translocation pathway signal K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YPD8_3577 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YPD8_3576 fdoI; formate dehydrogenase, cytochrome b556 protein K00127 fdoI; formate dehydrogenase subunit gamma
D YPD8_1640 hypothetical protein K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YPD8_1813 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:ypx00640]
D YPD8_0225 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPD8_2143 ackA; acetate/propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YPD8_2142 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_0919 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YPD8_3190 probable zinc-binding dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_1227 accA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YPD8_3194 accB; acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YPD8_3195 accC; acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YPD8_2517 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YPD8_2457 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPD8_1159 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YPD8_1158 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YPD8_2253 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YPD8_2999 acnB; aconitate hydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YPD8_1267 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D YPD8_0588 putative iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:ypx00650]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_3618 hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YPD8_1632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPD8_2206 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YPD8_1164 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_1162 sdhB; succinate dehydrogenase catalytic subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_1165 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YPD8_0314 frdA; fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_0313 frdB; succinate dehydrogenase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_0312 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D YPD8_0311 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D YPD8_2457 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPD8_1005 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_3167 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_0919 pflB; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YPD8_1434 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YPD8_1280 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YPD8_0472 acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_3437 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_1399 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_0473 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPD8_1400 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ypx00660]
D YPD8_0472 acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_3437 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_1399 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_0473 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPD8_1400 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPD8_1855 putative 4-hydroxybutyrate coenzyme A transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D YPD8_1159 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YPD8_1158 sucD; succinyl-CoA synthetase alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YPD8_1854 putative transcription regulatory protein K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D YPD8_1853 putative citrate lyase beta chain K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D YPD8_0078 hypothetical protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YPD8_0466 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YPD8_0465 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YPD8_0467 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ypx00562]
D YPD8_2411 putative inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YPD8_2084 probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YPD8_2255 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YPD8_2263 hypothetical protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D YPD8_2254 putative thiamine pyrophosphate-dependent protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D YPD8_2264 hypothetical protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D YPD8_2262 rbsK2; putative carbohydrate kinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D YPD8_2253 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YPD8_0081 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ypx00190]
D YPD8_2151 nuoA; NADH dehydrogenase alpha subunit K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D YPD8_2152 NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D YPD8_2153 NADH dehydrogenase I chain C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D YPD8_2154 nuoE; ATP synthase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D YPD8_2155 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D YPD8_2156 nuoG; NADH dehydrogenase gamma subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D YPD8_2157 nuoH; NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D YPD8_2158 nuoI; NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D YPD8_2159 nuoJ; NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D YPD8_2160 nuoK; NADH dehydrogenase kappa subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D YPD8_2161 nuoL; NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D YPD8_2162 nuoM; NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D YPD8_2163 nuoN; NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D YPD8_2113 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YPD8_1164 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_1162 sdhB; succinate dehydrogenase catalytic subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_1165 sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YPD8_0314 frdA; fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_0313 frdB; succinate dehydrogenase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_0312 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D YPD8_0311 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D YPD8_2767 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YPD8_2766 cyoD; cytochrome O ubiquinol oxidase subunit CyoD K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D YPD8_2765 cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D YPD8_2764 cyoB; cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D YPD8_2763 cyoA; cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D YPD8_1157 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YPD8_1156 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YPD8_3636 atpA; ATP synthase subunit A K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YPD8_3634 ATP synthase beta subunit protein K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YPD8_3635 atpG; ATP synthase subunit C K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YPD8_3637 atpH; ATP synthase subunit D K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YPD8_3633 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YPD8_3639 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YPD8_3638 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YPD8_3094 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D YPD8_2464 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ypx00680]
D YPD8_1613 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPD8_1614 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D YPD8_3578 hypothetical protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YPD8_3579 Twin-arginine translocation pathway signal K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D YPD8_3577 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YPD8_3576 fdoI; formate dehydrogenase, cytochrome b556 protein K00127 fdoI; formate dehydrogenase subunit gamma
D YPD8_0300 fdhF; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D YPD8_2404 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPD8_2958 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPD8_3463 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YPD8_3090 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPD8_0756 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_3485 hypothetical protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPD8_3093 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPD8_0085 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPD8_2236 hypothetical protein K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D YPD8_2143 ackA; acetate/propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YPD8_2142 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPD8_0225 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPD8_1502 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YPD8_1141 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPD8_0395 gpmB; phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPD8_0062 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YPD8_0762 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_1007 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_0913 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPD8_0382 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ypx00910]
D YPD8_2657 napA; periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D YPD8_2656 napB; cytochrome C-type protein NapB precursor K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D YPD8_0148 nirB; nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D YPD8_0147 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D YPD8_0940 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D YPD8_3496 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YPD8_0025 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPD8_3126 glutamate synthase (NADPH) large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YPD8_3127 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YPD8_0846 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D YPD8_2990 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ypx00920]
D YPD8_2636 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YPD8_0075 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YPD8_2635 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YPD8_2634 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YPD8_2633 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YPD8_0165 tauA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YPD8_0168 taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YPD8_0166 tauB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YPD8_0169 tauD; putative taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YPD8_3223 ssuA; solute-binding periplasmic protein of aliphatic sulfonates, ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D YPD8_3221 ssuC; putative aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D YPD8_3220 ssuB; putative aliphatic sulfonates transport ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YPD8_3222 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D YPD8_3224 ssuE; NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YPD8_2948 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPD8_2949 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPD8_2947 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YPD8_3102 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YPD8_2952 hypothetical protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D YPD8_2954 cysJ; sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D YPD8_2953 cysI; sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D YPD8_1085 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YPD8_0108 hypothetical protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D YPD8_0066 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YPD8_3542 pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPD8_2616 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPD8_2748 putative Pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPD8_3280 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YPD8_0101 hypothetical protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YPD8_2591 dmsA; putative dimethyl sulfoxide reductase chain A protein K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPD8_2912 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPD8_2592 dmsB; putative dimethyl sulfoxide reductase chain B protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPD8_2911 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPD8_2593 dmsC; putative dimethyl sulfoxide reductase chain C protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YPD8_2910 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ypx00061]
D YPD8_1227 accA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YPD8_3194 accB; acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YPD8_3195 accC; acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YPD8_2517 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YPD8_1285 putative acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPD8_2131 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPD8_1807 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YPD8_2132 fabH; 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YPD8_2527 fabB; 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPD8_1278 putative beta-ketoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPD8_0881 fabF; 3-oxoacyl-(acyl carrier protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPD8_2129 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPD8_1279 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPD8_2130 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPD8_1257 fabA; 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YPD8_1222 fabZ; (3R)-hydroxymyristoyl ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPD8_1277 fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPD8_3618 hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YPD8_0471 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_1716 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ypx00071]
D YPD8_3317 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_2538 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_2832 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D YPD8_0471 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_1716 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_0870 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YPD8_1613 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPD8_1632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ypx00561]
D YPD8_3505 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YPD8_2933 dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D YPD8_2932 hypothetical protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D YPD8_0086 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YPD8_2899 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YPD8_0275 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YPD8_2133 fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YPD8_0561 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YPD8_0583 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YPD8_0276 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YPD8_1537 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:ypx00564]
D YPD8_0065 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D YPD8_3467 aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YPD8_3373 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YPD8_3372 glpB; anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D YPD8_3371 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D YPD8_0275 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YPD8_0561 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YPD8_0583 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YPD8_0276 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YPD8_3381 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YPD8_3377 pldB; putative lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D YPD8_3340 ugpQ; cytoplasmic glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YPD8_3374 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YPD8_0870 aas; 2-acyl-glycerophospho-ethanolamine acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YPD8_3513 cdh; CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D YPD8_1217 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YPD8_2478 putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YPD8_2860 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YPD8_0317 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D YPD8_1896 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D YPD8_2777 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D YPD8_1344 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D YPD8_2388 hypothetical protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D YPD8_1624 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:ypx00565]
D YPD8_3381 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:ypx00600]
D YPD8_1801 putative glycosyl transferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D YPD8_2079 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YPD8_1537 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YPD8_2304 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D YPD8_3381 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D YPD8_3381 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:ypx00592]
D YPD8_3381 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YPD8_3317 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_2538 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ypx01040]
D YPD8_2694 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YPD8_2742 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YPD8_1317 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ypx00230]
D YPD8_0575 putative MutT-family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YPD8_0130 putative hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D YPD8_0379 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YPD8_2347 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPD8_1772 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YPD8_2513 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YPD8_3283 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D YPD8_2471 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YPD8_1982 purT; 5-phosphoribosylglycinamide transformylase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D YPD8_2391 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D YPD8_2472 purI; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D YPD8_2691 purK; phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D YPD8_2690 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D YPD8_2675 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D YPD8_2095 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YPD8_3282 PurH protein: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPD8_3281 PurH protein: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPD8_3543 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPD8_2731 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPD8_2704 Protein ushA precursor:UDP-sugar hydrolase; 5-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YPD8_2941 stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YPD8_2295 N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YPD8_0128 hypothetical protein K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D YPD8_2707 inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D YPD8_1107 xapA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPD8_0380 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPD8_2864 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YPD8_2991 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D YPD8_2436 guaB; inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YPD8_2425 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YPD8_0394 hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D YPD8_0735 putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D YPD8_2816 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D YPD8_2437 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YPD8_3012 guaC; guanosine 5-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D YPD8_0039 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D YPD8_2316 nrdE; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPD8_1068 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPD8_1069 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPD8_2315 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPD8_3036 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YPD8_2964 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D YPD8_2148 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YPD8_0038 spoT; guanosine-3,5-bisbis(diphosphate) 3-pyrophosphydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YPD8_3416 Guanosine-5-triphosphate,3-diphosphate diphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YPD8_2463 ppx; putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YPD8_2961 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D YPD8_3394 cyaA; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D YPD8_1100 cyaB; adenylate cyclase 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D YPD8_2356 hypothetical protein K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D YPD8_0331 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YPD8_1394 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D YPD8_1200 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YPD8_3103 cpdB; 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YPD8_2726 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YPD8_2960 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPD8_0577 icc; Icc-like protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D YPD8_0428 apaH; diadenosinetetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D YPD8_2947 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YPD8_2948 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPD8_2949 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPD8_2311 hypothetical protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D YPD8_2837 N-carbamoyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D YPD8_2841 hypothetical protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D YPD8_2330 urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YPD8_2329 ureB; urease (urea amidohydrolase) beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YPD8_2328 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YPD8_2847 amidase K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
C 00240 Pyrimidine metabolism [PATH:ypx00240]
D YPD8_0421 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YPD8_0420 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YPD8_3153 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YPD8_3154 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YPD8_2247 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D YPD8_0890 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D YPD8_0044 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D YPD8_1348 pyrF; orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D YPD8_1213 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D YPD8_2425 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YPD8_2960 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPD8_3185 maf; Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D YPD8_0516 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D YPD8_2959 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D YPD8_0911 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D YPD8_1644 nudG; putative pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D YPD8_1593 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D YPD8_2704 Protein ushA precursor:UDP-sugar hydrolase; 5-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YPD8_2941 stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YPD8_2295 N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YPD8_1401 nucleotidase K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D YPD8_3335 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D YPD8_2473 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D YPD8_3103 cpdB; 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YPD8_1200 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YPD8_1603 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D YPD8_0149 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YPD8_3036 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YPD8_1592 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D YPD8_2316 nrdE; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPD8_1068 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPD8_1069 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPD8_2315 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPD8_2148 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YPD8_2125 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D YPD8_0046 dut; deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YPD8_0377 hypothetical protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D YPD8_0378 Thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D YPD8_1635 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D YPD8_0877 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ypx00250]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_2370 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YPD8_0916 ansB; putative L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPD8_1649 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPD8_0003 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YPD8_2294 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YPD8_2149 aat; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPD8_0304 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D YPD8_1548 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YPD8_3459 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YPD8_0331 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YPD8_2095 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YPD8_3153 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YPD8_3154 pyrI; aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YPD8_2457 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPD8_1005 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_3167 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_3126 glutamate synthase (NADPH) large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YPD8_3127 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YPD8_3496 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YPD8_1911 putA2; bifunctional PutA protein (includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YPD8_0025 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPD8_0421 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YPD8_0420 carA; carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YPD8_0731 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_1842 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_3631 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YPD8_2513 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ypx00260]
D YPD8_3270 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPD8_0399 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPD8_0102 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPD8_3476 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPD8_0400 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D YPD8_0401 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YPD8_0943 ltaA; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D YPD8_2404 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPD8_3596 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPD8_3505 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YPD8_1141 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPD8_0395 gpmB; phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPD8_0062 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YPD8_0762 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_1007 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_0913 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPD8_0382 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D YPD8_0057 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YPD8_0058 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D YPD8_0771 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YPD8_0769 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_0770 gcsH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D YPD8_2860 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YPD8_1113 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D YPD8_1112 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YPD8_1985 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YPD8_3434 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPD8_3607 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPD8_2526 resistance protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPD8_2052 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPD8_1324 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YPD8_1325 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YPD8_1588 putative decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:ypx00270]
D YPD8_0066 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YPD8_3542 pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPD8_2616 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPD8_2748 putative Pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPD8_0591 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPD8_0246 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPD8_2627 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPD8_3274 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YPD8_3337 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YPD8_0748 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YPD8_2996 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YPD8_2995 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YPD8_2240 N-acylhomoserine lactone synthase YpeI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPD8_0709 ytbI; N-acylhomoserine lactone synthase YtbI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPD8_2965 mtn; 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D YPD8_2864 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YPD8_0283 tyrB; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPD8_2039 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D YPD8_2887 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YPD8_3270 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPD8_0399 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPD8_0102 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPD8_3476 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPD8_3280 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YPD8_0101 hypothetical protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YPD8_3436 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPD8_2888 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YPD8_0744 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_1085 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YPD8_2526 resistance protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPD8_2052 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPD8_1917 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YPD8_3090 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPD8_1985 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YPD8_2632 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D YPD8_0762 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_1007 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_0913 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ypx00280]
D YPD8_3436 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_3317 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_2538 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_2253 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YPD8_1280 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ypx00290]
D YPD8_3434 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPD8_3607 hypothetical protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPD8_0466 leuC; isopropylmalate isomerase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YPD8_0465 leuD; isopropylmalate isomerase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YPD8_0467 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D YPD8_0472 acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_3437 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_1399 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_0473 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPD8_1400 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPD8_3428 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YPD8_3435 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YPD8_3436 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPD8_3599 aminotransferase, classes I and II K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YPD8_2149 aat; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPD8_0468 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ypx00300]
D YPD8_3270 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPD8_0399 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPD8_0102 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPD8_3476 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPD8_2678 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YPD8_0419 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D YPD8_1208 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D YPD8_0157 hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YPD8_2670 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YPD8_3392 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YPD8_0866 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YPD8_1845 putative aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D YPD8_0482 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YPD8_0483 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ypx00310]
D YPD8_1160 sucB; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_2526 resistance protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPD8_2052 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPD8_1005 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_3167 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_0906 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D YPD8_1500 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:ypx00220]
D YPD8_3028 argI; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YPD8_1548 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YPD8_3459 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YPD8_2330 urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YPD8_2329 ureB; urease (urea amidohydrolase) beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YPD8_2328 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YPD8_0731 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_1842 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_0025 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPD8_3496 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_2149 aat; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPD8_1190 argA; N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D YPD8_3460 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D YPD8_3461 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D YPD8_0157 hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YPD8_3462 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ypx00330]
D YPD8_0149 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YPD8_1078 putative amino acid decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D YPD8_0749 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D YPD8_0740 hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D YPD8_0741 putative carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D YPD8_0721 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YPD8_2995 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YPD8_2996 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YPD8_2470 speG; spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D YPD8_1820 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D YPD8_1818 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D YPD8_1821 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YPD8_1819 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D YPD8_1817 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D YPD8_0737 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D YPD8_1911 putA2; bifunctional PutA protein (includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YPD8_2813 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YPD8_2812 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D YPD8_1976 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ypx00340]
D YPD8_1567 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D YPD8_1574 hisI; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D YPD8_1572 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D YPD8_1571 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D YPD8_1573 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D YPD8_1570 hisB; imidazole glycerol-phosphate dehydratase/histidinol phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D YPD8_1569 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPD8_1568 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D YPD8_3540 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YPD8_3541 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D YPD8_1812 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D YPD8_1810 atrazine chlorohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D YPD8_1813 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:ypx00350]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_1569 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPD8_0283 tyrB; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPD8_1086 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPD8_1613 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPD8_1632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPD8_1987 hpaB; 4-hydroxyphenylacetate 3-monooxygenase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D YPD8_1986 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YPD8_1992 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D YPD8_1993 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D YPD8_1991 hpaF; 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D YPD8_1994 5-carboxymethyl-2-hydroxymuconate delta-isomerase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D YPD8_1995 hypothetical protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D YPD8_1990 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D YPD8_1989 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D YPD8_1005 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_3167 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ypx00360]
D YPD8_1086 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_1569 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPD8_0283 tyrB; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPD8_1661 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D YPD8_2906 catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D YPD8_2907 catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:ypx00380]
D YPD8_1160 sucB; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_1086 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPD8_1074 catalase K03781 katE; catalase [EC:1.11.1.6]
D YPD8_2906 catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D YPD8_2907 catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ypx00400]
D YPD8_1144 hypothetical protein K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPD8_1504 aroH; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPD8_2874 aroF; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPD8_0139 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D YPD8_3193 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D YPD8_0218 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D YPD8_2808 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YPD8_0138 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YPD8_0912 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D YPD8_2533 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D YPD8_1329 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YPD8_1328 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YPD8_1327 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D YPD8_1326 trpC; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D YPD8_1324 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YPD8_1325 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YPD8_2873 tyrA; chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YPD8_0947 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D YPD8_2869 hypothetical protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D YPD8_2928 extracellular solute-binding protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D YPD8_2872 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_1569 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPD8_0283 tyrB; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ypx00410]
D YPD8_2986 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D YPD8_2457 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPD8_2985 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_2253 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ypx00430]
D YPD8_2793 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YPD8_0169 tauD; putative taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YPD8_2142 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPD8_2143 ackA; acetate/propionate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ypx00440]
D YPD8_3041 phnI; PhnI protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D YPD8_3039 phnG; PhnG protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D YPD8_3040 phnH; PhnH protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D YPD8_3044 phnL; phosphonates transport ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D YPD8_3045 PhnM protein K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D YPD8_3042 phnJ; PhnJ protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D YPD8_3047 phnP; PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ypx00450]
D YPD8_0101 hypothetical protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D YPD8_0591 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPD8_0246 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPD8_2627 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPD8_3274 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YPD8_3337 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YPD8_1494 selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D YPD8_0928 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D YPD8_2948 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPD8_2949 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPD8_1646 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YPD8_3574 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YPD8_1595 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ypx00460]
D YPD8_0540 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPD8_2490 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPD8_2793 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YPD8_0916 ansB; putative L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPD8_1649 ansA; cytoplasmic asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPD8_0003 asnA; asparagine synthetase AsnA K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YPD8_2404 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ypx00470]
D YPD8_0282 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YPD8_0489 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPD8_2526 resistance protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPD8_2052 alr; alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPD8_0731 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_1842 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_3445 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YPD8_0485 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YPD8_1441 putative mandelate racemase / muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D YPD8_1917 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YPD8_3392 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YPD8_0866 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YPD8_0954 ABC transport protein K23120 cntL; histidine 2-aminobutanoyltransferase [EC:2.5.1.152 2.5.1.-]
D YPD8_0953 hypothetical protein K23122 cntM; staphylopine/pseudopaline/yersinopine synthase [EC:1.5.1.52 1.5.1.-]
D YPD8_1661 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ypx00480]
D YPD8_2793 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YPD8_2360 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D YPD8_2358 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D YPD8_2359 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D YPD8_2888 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YPD8_0744 gshB; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YPD8_3023 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YPD8_2419 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YPD8_0891 pepN; putative aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YPD8_2819 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YPD8_1463 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPD8_0981 putative glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPD8_3501 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D YPD8_2089 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YPD8_1575 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YPD8_1724 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YPD8_1517 btuE; putative vitamin B12 transport protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D YPD8_3452 putative peroxiredoxin/glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D YPD8_0721 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YPD8_2995 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ypx00511]
D YPD8_2079 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YPD8_2304 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:ypx00540]
D YPD8_1223 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YPD8_0493 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YPD8_1221 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YPD8_2689 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YPD8_1224 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YPD8_0907 lpxK; tetraacyldisaccharide 4-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YPD8_3145 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YPD8_1764 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YPD8_3146 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YPD8_0905 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YPD8_0053 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YPD8_1727 msbB; lipid A biosynthesis lauroyl acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YPD8_1015 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YPD8_1472 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YPD8_3537 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YPD8_2007 crcA; hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YPD8_1511 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YPD8_3216 lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YPD8_2831 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YPD8_0568 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YPD8_1241 hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YPD8_0056 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YPD8_0054 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YPD8_0055 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YPD8_0362 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ypx00542]
D YPD8_3412 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ypx00541]
D YPD8_1576 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_1577 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPD8_1136 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YPD8_1637 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPD8_3407 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPD8_3408 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YPD8_3405 rffA; putative lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D YPD8_3406 wecD; TDP-D-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D YPD8_2723 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YPD8_2722 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D YPD8_2721 ddhC; putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D YPD8_2724 ddhD; CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D YPD8_2720 prt; paratose synthase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D YPD8_1380 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YPD8_2218 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPD8_2709 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPD8_2711 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YPD8_2713 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YPD8_2714 hypothetical protein K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D YPD8_2712 wcaG; nucleotide di-P-sugar epimerase or dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D YPD8_3632 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YPD8_3410 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YPD8_3409 rffD; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:ypx00550]
D YPD8_3138 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YPD8_3311 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YPD8_0488 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YPD8_0485 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YPD8_0482 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YPD8_0489 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPD8_0483 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YPD8_1216 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YPD8_0563 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPD8_0971 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPD8_0484 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YPD8_0487 UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YPD8_3122 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPD8_0131 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPD8_2974 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YPD8_2501 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YPD8_2276 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YPD8_0480 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YPD8_2273 penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPD8_0975 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPD8_3082 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YPD8_2249 hypothetical protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
C 00552 Teichoic acid biosynthesis [PATH:ypx00552]
D YPD8_0563 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPD8_0971 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPD8_3412 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ypx00543]
D YPD8_3412 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YPD8_3401 wecG; putative UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YPD8_3403 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YPD8_1828 hmsR; hemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D YPD8_1827 hmsS; hemin storage system, HmsS protein K11937 pgaD; biofilm PGA synthesis protein PgaD
D YPD8_0066 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ypx00730]
D YPD8_3291 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D YPD8_2443 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D YPD8_3293 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D YPD8_2414 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_1668 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_2772 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPD8_2773 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPD8_3295 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D YPD8_2775 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YPD8_3294 thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D YPD8_3292 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D YPD8_2778 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D YPD8_0318 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YPD8_1404 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPD8_2116 cotS; Predicted choline kinase involved in LPS biosynthesis K07251 thiK; thiamine kinase [EC:2.7.1.89]
D YPD8_2726 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ypx00740]
D YPD8_1343 ribA; GTP cyclohydrolase II protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YPD8_2781 ribD; riboflavin biosynthesis protein RibD (includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YPD8_3389 putative haloacid dehalogenase-like hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D YPD8_0570 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D YPD8_2780 ribH; riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D YPD8_1486 ribE; riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D YPD8_0412 riboflavin biosynthesis protein: riboflavin kinase and FMN adenyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D YPD8_2084 probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YPD8_1986 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YPD8_3318 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D YPD8_3224 ssuE; NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YPD8_0575 putative MutT-family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YPD8_2091 hypothetical protein K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D YPD8_2512 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ypx00750]
D YPD8_1466 pdxH; pyridoxamine 5-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D YPD8_1464 pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D YPD8_0754 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D YPD8_2521 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D YPD8_0913 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPD8_0431 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D YPD8_2383 pdxJ; pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D YPD8_0401 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ypx00760]
D YPD8_2370 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YPD8_1147 nadA; quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D YPD8_3008 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D YPD8_0892 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D YPD8_1107 xapA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPD8_0380 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPD8_0384 nadR; nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YPD8_2704 Protein ushA precursor:UDP-sugar hydrolase; 5-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D YPD8_2941 stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YPD8_2295 N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YPD8_2279 nadD; nicotinic acid mononucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D YPD8_2960 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPD8_3289 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D YPD8_2399 nadE; NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D YPD8_2894 competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D YPD8_1650 pncA; putative pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D YPD8_2102 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D YPD8_1168 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D YPD8_3450 sthA; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D YPD8_1409 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D YPD8_1408 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D YPD8_1005 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPD8_3167 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ypx00770]
D YPD8_0472 acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_3437 ilvG; acetolactate synthase II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_1399 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPD8_0473 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPD8_1400 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPD8_3428 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YPD8_3435 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YPD8_2984 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D YPD8_2770 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YPD8_2985 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YPD8_3309 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D YPD8_0048 dfp; phosphopantothenoylcysteine synthase/decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D YPD8_2960 hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPD8_0051 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D YPD8_3013 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D YPD8_2384 acpS; 4-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D YPD8_2791 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D YPD8_3436 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPD8_2986 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ypx00780]
D YPD8_1123 bioC; biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D YPD8_2527 fabB; 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPD8_1278 putative beta-ketoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPD8_0881 fabF; 3-oxoacyl-(acyl carrier protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPD8_2129 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPD8_1279 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPD8_2130 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPD8_1222 fabZ; (3R)-hydroxymyristoyl ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPD8_1277 fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPD8_0118 bioH; putative biotin biosynthesis protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D YPD8_1124 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YPD8_1122 bioD; dithiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YPD8_1387 bioD; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YPD8_1125 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D YPD8_3310 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ypx00785]
D YPD8_2272 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D YPD8_2271 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D YPD8_1507 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3003 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPD8_3002 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPD8_1161 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YPD8_1160 sucB; dihydrolipoamide acetyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPD8_0771 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YPD8_0769 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPD8_0770 gcsH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ypx00790]
D YPD8_1610 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D YPD8_1404 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPD8_1736 ntpA; dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D YPD8_0562 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D YPD8_2983 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D YPD8_3077 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D YPD8_0425 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YPD8_2516 folC; putative FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D YPD8_1343 ribA; GTP cyclohydrolase II protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YPD8_0156 pabA; para-aminobenzoate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D YPD8_1983 para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D YPD8_2127 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D YPD8_2955 6-pyruvoyl tetrahydrobiopterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YPD8_2956 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YPD8_2751 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YPD8_1201 hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YPD8_1118 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YPD8_1117 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YPD8_1116 molybdopterin (mpt) converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YPD8_0404 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YPD8_1619 moeA; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D YPD8_0014 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ypx00670]
D YPD8_0425 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YPD8_2475 folD; putative FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D YPD8_2404 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPD8_2471 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YPD8_3282 PurH protein: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPD8_3281 PurH protein: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPD8_0212 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YPD8_0769 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPD8_3274 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YPD8_0877 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YPD8_1640 hypothetical protein K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D YPD8_0103 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YPD8_0255 putative methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YPD8_0763 putative 5-formyltetrahydrofolate cyclo-ligase-family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ypx00860]
D YPD8_2609 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPD8_1769 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D YPD8_2970 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YPD8_3321 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YPD8_3395 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D YPD8_3396 hemD; uroporphyrinogen-III synthetase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D YPD8_3287 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D YPD8_2651 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D YPD8_0022 hemN; coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D YPD8_2725 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D YPD8_3397 hemX; putative uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D YPD8_2950 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YPD8_0145 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YPD8_2767 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YPD8_pMT0055 cobS; porphyrin biosynthetic protein K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D YPD8_1334 btuR; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YPD8_0186 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ypx00130]
D YPD8_0273 ubiC; putative chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D YPD8_0274 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YPD8_3319 oxidoreductase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D YPD8_2512 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YPD8_0768 visC; hypothetical protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D YPD8_1067 ubiG; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D YPD8_0767 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D YPD8_3330 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D YPD8_2293 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D YPD8_2176 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YPD8_2177 menD; 2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D YPD8_2178 hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D YPD8_2180 O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D YPD8_2181 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D YPD8_2179 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D YPD8_1499 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D YPD8_0093 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YPD8_1904 TrpR binding protein WrbA K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YPD8_2086 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ypx00900]
D YPD8_2775 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YPD8_1215 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D YPD8_2944 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D YPD8_1771 putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D YPD8_2943 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D YPD8_2429 aarC; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D YPD8_0417 lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D YPD8_1280 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YPD8_2512 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YPD8_2774 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YPD8_3088 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YPD8_1216 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ypx00907]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_3317 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_2538 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D YPD8_0752 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPD8_2900 C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPD8_2901 putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ypx00523]
D YPD8_3407 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPD8_3408 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ypx01053]
D YPD8_2176 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YPD8_1538 putative phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YPD8_1864 ybtS; anthranilate synthase component I K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21]
D YPD8_0678 putative siderophore biosysnthesis protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D YPD8_0676 hypothetical protein K12241 pchG; pyochelin biosynthesis protein PchG
D YPD8_1875 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D YPD8_1870 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YPD8_1873 yersiniabactin biosynthetic protein YbtU K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
C 01055 Biosynthesis of vancomycin group antibiotics
D YPD8_3408 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ypx00946]
D YPD8_0540 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPD8_2490 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ypx00332]
D YPD8_2813 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YPD8_2812 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ypx00261]
D YPD8_2948 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPD8_2949 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPD8_3270 lysC; aspartate kinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPD8_0399 bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPD8_0102 metL; bifunctional aspartate kinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPD8_3476 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPD8_2678 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YPD8_0419 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ypx00521]
D YPD8_2603 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPD8_2347 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPD8_2411 putative inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YPD8_2255 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D YPD8_3407 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPD8_3408 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D YPD8_2603 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ypx00525]
D YPD8_3407 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPD8_3408 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ypx00401]
D YPD8_2873 tyrA; chorismate mutase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_1569 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPD8_0283 tyrB; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D YPD8_1329 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YPD8_1328 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D YPD8_1285 putative acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPD8_2131 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPD8_1279 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPD8_2130 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ypx00999]
D YPD8_0748 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YPD8_0218 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D YPD8_0540 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPD8_2490 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:ypx00997]
D YPD8_0700 iucD; putative siderophore biosynthesis protein IucD K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D YPD8_0702 iucB; putative siderophore biosynthesis protein IucB K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D YPD8_0703 iucA2; aerobactin synthetase (subunit alpha) K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D YPD8_0704 iucA1; aerobactin synthetase (subunit alpha) K03894 iucA; N2-citryl-N6-acetyl-N6-hydroxylysine synthase [EC:6.3.2.38]
D YPD8_0701 iucC; putative siderophore biosynthesis protein IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ypx00362]
D YPD8_3317 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_2538 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_1785 putative decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YPD8_3202 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YPD8_0079 hypothetical protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D YPD8_0078 hypothetical protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation
D YPD8_2512 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:ypx00364]
D YPD8_3336 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ypx00625]
D YPD8_1613 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPD8_1632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ypx00361]
D YPD8_3336 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:ypx00623]
D YPD8_3336 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:ypx00633]
D YPD8_1474 NADH:flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D YPD8_3317 fadA; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPD8_2538 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D YPD8_2330 urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YPD8_2329 ureB; urease (urea amidohydrolase) beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YPD8_2328 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:ypx00930]
D YPD8_3316 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPD8_2537 faoA; putative fatty oxidation complex alpha subunit, enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:ypx00626]
D YPD8_1613 adhC; alcohol dehydrogenase class III; formaldehyde dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPD8_1632 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ypx03020]
D YPD8_3298 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YPD8_3297 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YPD8_0206 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ypx03010]
D YPD8_0910 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YPD8_1211 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YPD8_0193 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YPD8_0205 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YPD8_0201 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YPD8_3110 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YPD8_0182 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YPD8_0199 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YPD8_3131 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YPD8_0187 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YPD8_0181 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YPD8_0204 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YPD8_0198 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YPD8_3301 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YPD8_0191 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D YPD8_0188 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YPD8_0189 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YPD8_0197 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YPD8_3299 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YPD8_3109 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YPD8_3300 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YPD8_3302 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YPD8_3132 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YPD8_0195 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YPD8_0202 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YPD8_0194 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YPD8_0207 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YPD8_0200 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YPD8_2880 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YPD8_1523 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YPD8_3087 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YPD8_0192 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YPD8_0190 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YPD8_0196 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YPD8_r1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r9 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r5 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r8 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r7 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r6 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ypx00970]
D YPD8_t45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t70 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t47 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t40 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t50 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t51 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t49 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t67 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t39 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t23 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YPD8_t32 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YPD8_t27 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YPD8_t18 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YPD8_t69 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YPD8_t19 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YPD8_t29 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D YPD8_t35 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YPD8_t36 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YPD8_t33 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YPD8_t17 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YPD8_t57 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YPD8_t59 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t9 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t30 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t66 tRNA-His K14226 tRNA-His; tRNA His
D YPD8_t1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t71 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t63 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t48 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t37 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t55 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t53 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t41 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t31 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t34 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t38 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t15 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t16 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t54 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t7 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t3 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YPD8_t8 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YPD8_t10 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YPD8_t64 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YPD8_t72 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YPD8_t12 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t52 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t26 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t56 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t58 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t61 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t68 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D YPD8_t24 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YPD8_t60 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YPD8_t42 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t44 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t43 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t22 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t21 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t73 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D YPD8_2609 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPD8_2301 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YPD8_2891 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YPD8_1737 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPD8_0893 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YPD8_3591 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YPD8_3590 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YPD8_1525 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YPD8_0923 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YPD8_3574 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YPD8_2687 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YPD8_1595 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YPD8_0212 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YPD8_3025 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YPD8_2282 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPD8_0414 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YPD8_0787 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YPD8_1744 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPD8_1235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YPD8_2430 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YPD8_1522 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YPD8_1521 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YPD8_1465 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPD8_0144 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ypx03060]
D YPD8_0203 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D YPD8_3304 secE; translocase K03073 secE; preprotein translocase subunit SecE
D YPD8_2787 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YPD8_2786 secF; protein export protein SecF K03074 secF; preprotein translocase subunit SecF
D YPD8_2788 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YPD8_3616 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPD8_0496 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPD8_0064 secB; export protein SecB K03071 secB; preprotein translocase subunit SecB
D YPD8_0495 SecA regulator SecM K13301 secM; secretion monitor
D YPD8_2883 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YPD8_3362 cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPD8_3327 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YPD8_3326 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YPD8_2377 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YPD8_0415 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ypx04122]
D YPD8_2414 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_1668 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_1085 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YPD8_3368 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YPD8_0180 hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YPD8_0179 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YPD8_1272 sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YPD8_2092 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YPD8_1116 molybdopterin (mpt) converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YPD8_1118 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YPD8_1620 molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D YPD8_1117 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YPD8_0404 mogA; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YPD8_2772 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPD8_2773 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPD8_3293 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ypx03018]
D YPD8_0874 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YPD8_2138 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YPD8_3415 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YPD8_2958 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPD8_3068 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YPD8_0333 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YPD8_3066 deaD; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YPD8_3380 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YPD8_3413 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPD8_0408 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D YPD8_0306 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPD8_0327 ymr; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D YPD8_2464 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YPD8_2981 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ypx03030]
D YPD8_1250 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_1251 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_1226 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_pMT0054 DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_2730 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPD8_2124 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPD8_2280 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPD8_0369 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPD8_3024 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPD8_3614 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPD8_0281 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YPD8_0559 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YPD8_0286 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YPD8_1249 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YPD8_1225 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YPD8_0018 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPD8_0040 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_2613 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ypx03410]
D YPD8_1357 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YPD8_2364 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YPD8_0728 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YPD8_0050 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YPD8_1927 glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YPD8_3592 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YPD8_1643 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YPD8_0990 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YPD8_0018 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPD8_0785 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPD8_0040 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_2613 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ypx03420]
D YPD8_0285 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D YPD8_1120 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D YPD8_1897 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YPD8_1898 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YPD8_3388 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YPD8_0018 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPD8_0040 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_2613 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ypx03430]
D YPD8_2937 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YPD8_0324 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D YPD8_0873 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D YPD8_3388 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YPD8_1559 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YPD8_2435 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YPD8_0785 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPD8_0286 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YPD8_1226 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_pMT0054 DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_3614 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPD8_2730 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPD8_2280 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPD8_2124 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPD8_1250 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_1251 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_3024 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPD8_0369 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPD8_0040 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_2613 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_1706 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPD8_0141 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ypx03440]
D YPD8_0785 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPD8_0286 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YPD8_3613 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D YPD8_2380 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D YPD8_2728 recombination protein RecR K06187 recR; recombination protein RecR
D YPD8_2893 recA; recombinase A K03553 recA; recombination protein RecA
D YPD8_0018 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPD8_1733 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D YPD8_1732 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YPD8_1734 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YPD8_0036 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YPD8_1188 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YPD8_1186 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YPD8_1189 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YPD8_1226 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_pMT0054 DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_3614 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPD8_2730 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPD8_2280 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPD8_2124 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPD8_1250 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_1251 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_3024 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPD8_0369 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPD8_0098 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YPD8_2732 priC; primosomal replication protein n K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ypx03250]
D YPD8_0154 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ypx02010]
D YPD8_2636 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YPD8_0075 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YPD8_2635 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YPD8_2634 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YPD8_2633 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YPD8_0165 tauA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YPD8_0168 taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YPD8_0166 tauB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YPD8_3223 ssuA; solute-binding periplasmic protein of aliphatic sulfonates, ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D YPD8_3221 ssuC; putative aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D YPD8_3220 ssuB; putative aliphatic sulfonates transport ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YPD8_1132 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YPD8_0076 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D YPD8_1131 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein
D YPD8_1130 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YPD8_1134 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D YPD8_2667 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPD8_2586 sfuA; iron(III)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPD8_2666 putative binding protein-dependent transport system, inner-membrane component K02011 afuB; iron(III) transport system permease protein
D YPD8_2587 yfuB; inner membrane permease of iron ABC transporter K02011 afuB; iron(III) transport system permease protein
D YPD8_2665 probable ABC-transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPD8_2588 iron(III)-transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPD8_0460 thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D YPD8_0459 cysU; sulfate/thiosulfate ABC transporter, permease protein CysT K02063 thiP; thiamine transport system permease protein
D YPD8_0458 thiamine transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YPD8_0966 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein
D YPD8_0963 potI; putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D YPD8_0964 potH; putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D YPD8_0965 potG; putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YPD8_2312 proX; glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YPD8_2313 proW; glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D YPD8_2314 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YPD8_1084 yehZ1; hypothetical protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YPD8_1083 ABC type periplasmic choline/glycine/betaine binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YPD8_1080 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPD8_1082 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPD8_1081 putative ABC transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YPD8_3264 malE; periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YPD8_3265 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D YPD8_3266 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D YPD8_3263 malK; maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_2217 mtlK; putative mannitol transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_0807 sugar transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_1881 putative binding-protein-dependent transport system, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_0533 transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_3051 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_0808 sugar-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YPD8_0809 sugar-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YPD8_0810 putative maltodextrin transport permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPD8_0811 putative maltodextrin permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPD8_2023 putative sugar-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YPD8_2020 ABC sugar transporter (permease) K10193 togM; oligogalacturonide transport system permease protein
D YPD8_2021 putative sugar ABC transporter (permease) K10194 togN; oligogalacturonide transport system permease protein
D YPD8_2022 putative sugar ABC transporter K10195 togA; oligogalacturonide transport system ATP-binding protein
D YPD8_3140 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D YPD8_3141 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YPD8_3142 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YPD8_3139 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D YPD8_3143 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YPD8_0722 putative sugar ABC transporter periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_2200 sugar binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_3487 sugar-binding transport protein K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_0724 sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPD8_2203 rbsC; putative sugar transport system, permease protein K10440 rbsC; ribose transport system permease protein
D YPD8_3488 sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPD8_0723 mglA; putative sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPD8_2202 rbsA; putative sugar transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPD8_3489 sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPD8_0007 ribose permease K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D YPD8_1372 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D YPD8_1374 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D YPD8_1373 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YPD8_3444 putative periplasmic protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YPD8_3441 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPD8_3442 sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPD8_3443 putative sugar transport system ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YPD8_1608 galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YPD8_1606 mglC; beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D YPD8_1607 mglA; galactoside transport ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YPD8_3558 sugar-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YPD8_3555 sugar transport system permease protein K10544 xylH; D-xylose transport system permease protein
D YPD8_3557 sugar transport ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YPD8_2905 sugar ABC transporter, periplasmic protein K17202 eryG; erythritol transport system substrate-binding protein
D YPD8_2902 putative sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YPD8_2903 putative sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YPD8_0804 sugar-binding periplasmic protein K17205 xltC; putative xylitol transport system substrate-binding protein
D YPD8_0805 sugar transport system permease K17206 xltB; putative xylitol transport system permease protein
D YPD8_0806 sugar transport ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D YPD8_2257 putative sugar-binding periplasmic protein K17208 ibpA; inositol transport system substrate-binding protein
D YPD8_2259 sugar transport system permease protein K17209 iatP; inositol transport system permease protein
D YPD8_2258 rbsA; ATP-binding component of D-ribose high-affinity transport system K17210 iatA; inositol transport system ATP-binding protein
D YPD8_3344 ugpB; glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YPD8_3343 ugpA; sn-glycerol-3-phosphate transport system, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YPD8_3342 ugpE; sn-glycerol-3-phosphate transport system, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YPD8_3341 sn-glycerol-3-phosphate transport, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YPD8_2801 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YPD8_3630 pstS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YPD8_3629 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPD8_2465 putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPD8_3628 phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPD8_2466 pstA; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPD8_3627 pstB; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPD8_2467 pstb; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPD8_1096 putative substrate-binding periplasmic transport protein K02044 phnD; phosphonate transport system substrate-binding protein
D YPD8_1094 ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YPD8_1095 inner membrane permease of ABC transporter K02042 phnE; phosphonate transport system permease protein
D YPD8_1097 putative ABC transport ATP-binding subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YPD8_2509 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D YPD8_2510 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YPD8_2508 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_2511 histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D YPD8_2189 glnH; glutamine ABC transporter periplasmic-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D YPD8_2188 glnP; glutamine ABC transporter permease component K10037 glnP; glutamine transport system permease protein
D YPD8_2187 glnQ; glutamine ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_0960 hypothetical protein K09996 artJ; arginine transport system substrate-binding protein
D YPD8_0949 artI; arginine-binding periplasmic protein 1 precursor K09997 artI; arginine transport system substrate-binding protein
D YPD8_0951 artM; arginine transport system permease protein K09998 artM; arginine transport system permease protein
D YPD8_0950 artQ; arginine transport system permease protein K09999 artQ; arginine transport system permease protein
D YPD8_0948 artP; arginine transport ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_2287 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YPD8_2285 glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YPD8_2286 glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YPD8_2284 putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_1916 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPD8_1915 putative amino-acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D YPD8_1914 putative amino-acid ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_3356 livK; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YPD8_3355 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YPD8_3354 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YPD8_3353 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YPD8_3352 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YPD8_1238 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D YPD8_0978 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D YPD8_1239 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D YPD8_0976 putative ABC transport integral membrane subunit K02072 metI; D-methionine transport system permease protein
D YPD8_1240 abc; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YPD8_0977 putative ABC transport ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D YPD8_1092 putative substrate-binding periplasmic transport protein K11959 urtA; urea transport system substrate-binding protein
D YPD8_1091 putative Branched-chain amino acid transport system, permease component K11960 urtB; urea transport system permease protein
D YPD8_1090 putative Branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein
D YPD8_1089 putative ABC transport ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D YPD8_1088 livF; ATP-binding component of ABC transporter K11963 urtE; urea transport system ATP-binding protein
D YPD8_1121 putative amino acid transporter K11963 urtE; urea transport system ATP-binding protein
D YPD8_1439 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1630 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1629 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D YPD8_1628 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPD8_1627 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D YPD8_1626 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPD8_3528 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YPD8_3527 dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D YPD8_3526 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D YPD8_3525 dppD; dipeptide ABC transporter, ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D YPD8_3524 dppF; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D YPD8_1455 peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YPD8_1456 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YPD8_1457 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YPD8_1458 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YPD8_1459 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YPD8_1018 substrate-binding transport protein K13893 yejA; microcin C transport system substrate-binding protein
D YPD8_1019 putative ABC transporter integral membrane subunit K13894 yejB; microcin C transport system permease protein
D YPD8_1020 putative ABC transporter integral membrane subunit K13895 yejE; microcin C transport system permease protein
D YPD8_1021 putative ABC transporter ATP-binding subunit K13896 yejF; microcin C transport system ATP-binding protein
D YPD8_0611 fepB; ferric enterobactin (enterochelin) binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YPD8_1581 putative iron-siderophore transport system, periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D YPD8_1582 putative iron-siderophore transport system, transmembrane component K23186 fepD; iron-siderophore transport system permease protein
D YPD8_1583 putative iron-siderophore transport system, membrane permease component K23187 fepG; iron-siderophore transport system permease protein
D YPD8_1584 fepC; ferric enterobactin ABC transporter, ATP-binding protein FepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YPD8_2972 fhuD; ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YPD8_2971 ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YPD8_2973 fhuC; ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YPD8_2966 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D YPD8_1518 btuC2; vtamin B12-transporter permease K06073 btuC; vitamin B12 transport system permease protein
D YPD8_1516 vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YPD8_1729 znuA; exported high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D YPD8_1731 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D YPD8_1730 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YPD8_1528 periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D YPD8_1530 yfeC; chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D YPD8_1531 yfeD; chelated iron transport system membrane protein K11606 sitD; manganese/iron transport system permease protein
D YPD8_1529 yfeB; ATP-binding transport protein K11607 sitB; manganese/iron transport system ATP-binding protein
D YPD8_0355 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YPD8_0357 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YPD8_0356 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YPD8_0358 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YPD8_2104 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPD8_2106 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPD8_2105 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YPD8_2546 ccmD; putative heme exporter protein D K02196 ccmD; heme exporter protein D
D YPD8_2547 ccmC; putative heme exporter protein C K02195 ccmC; heme exporter protein C
D YPD8_2548 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D YPD8_2549 ccmA; putative heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YPD8_3022 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D YPD8_3021 membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D YPD8_3149 cysA; sulfate transport ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YPD8_3360 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D YPD8_3361 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YPD8_0673 ABC-transporter transmembrane protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPD8_1868 lipoprotein inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPD8_0672 ABC-transporter transmembrane protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPD8_1866 inner membrane ABC-transporter YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPD8_0908 msbA; probable transport ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YPD8_2746 mdlA; probable ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPD8_2745 mdlB; probable ATP transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPD8_0089 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YPD8_2266 ABC transporter, ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YPD8_3456 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YPD8_0930 cydC; transport ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YPD8_0929 transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YPD8_0935 putative ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YPD8_2623 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:ypx02060]
D YPD8_2617 ptsI; PTS system, enzyme I component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YPD8_2618 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPD8_2122 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YPD8_2299 pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YPD8_3158 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YPD8_3588 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YPD8_2343 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YPD8_2341 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YPD8_2342 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YPD8_1998 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPD8_1999 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPD8_2000 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPD8_0829 hypothetical protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YPD8_0832 manX; putative PTS transport protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YPD8_0831 putative PTS permease protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YPD8_0830 putative PTS permease protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YPD8_2140 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YPD8_2503 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D YPD8_0998 fruB; hypothetical protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YPD8_0996 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YPD8_0997 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YPD8_0875 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YPD8_3151 ptsN; phosphotransferase system enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ypx03070]
D YPD8_0574 ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPD8_pCD0030 yscO; type III secretion apparatus component K04056 yscO; type III secretion protein O
D YPD8_pCD0031 yscP; type III secretion apparatus component K04057 yscP; type III secretion protein P
D YPD8_pCD0026 yscX; hypothetical protein K04059 yscX; type III secretion protein X
D YPD8_0229 possible type III secretion protein K03219 yscC; type III secretion protein C
D YPD8_pCD0039 yscC; outer membrane secretin precursor K03219 yscC; type III secretion protein C
D YPD8_pCD0028 lcrE; secretion control protein K04058 yscW; type III secretion protein W
D YPD8_0232 type III secretion system apparatus lipoprotein K03222 yscJ; type III secretion protein J
D YPD8_pCD0045 ylpB; needle complex inner membrane lipoprotein K03222 yscJ; type III secretion protein J
D YPD8_0240 putative type III secretion apparatus protein K03226 yscR; type III secretion protein R
D YPD8_pCD0033 yscR; needle complex export protein K03226 yscR; type III secretion protein R
D YPD8_0241 putative type III secretion apparatus protein K03228 yscT; type III secretion protein T
D YPD8_pCD0034 yscT; needle complex export protein K03228 yscT; type III secretion protein T
D YPD8_0242 putative type III secretion apparatus protein K03229 yscU; type III secretion protein U
D YPD8_pCD0035 yscU; needle complex export protein K03229 yscU; type III secretion protein U
D YPD8_0235 secretion system apparatus protein K03230 yscV; type III secretion protein V
D YPD8_pCD0024 yscV; low calcium response protein D K03230 yscV; type III secretion protein V
D YPD8_0236 flagellum-specific ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPD8_pCD0029 yscN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPD8_0239 type III secretion protein K03225 yscQ; type III secretion protein Q
D YPD8_pCD0032 yscQ; type III secretion protein K03225 yscQ; type III secretion protein Q
D YPD8_pCD0047 yscL; type III secretion protein K03223 yscL; type III secretion protein L
D YPD8_0849 general secretion protein K02453 gspD; general secretion pathway protein D
D YPD8_0858 putative lipoprotein K02465 gspS; general secretion pathway protein S
D YPD8_0848 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YPD8_0851 hofF; general protein secretion protein K02455 gspF; general secretion pathway protein F
D YPD8_0852 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YPD8_0853 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D YPD8_0854 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YPD8_0855 L-like GSP protein K02461 gspL; general secretion pathway protein L
D YPD8_0850 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YPD8_0857 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YPD8_2787 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YPD8_2786 secF; protein export protein SecF K03074 secF; preprotein translocase subunit SecF
D YPD8_3304 secE; translocase K03073 secE; preprotein translocase subunit SecE
D YPD8_0203 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D YPD8_2788 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YPD8_3616 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPD8_0496 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPD8_0495 SecA regulator SecM K13301 secM; secretion monitor
D YPD8_3362 cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPD8_0064 secB; export protein SecB K03071 secB; preprotein translocase subunit SecB
D YPD8_2883 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YPD8_3327 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YPD8_3326 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YPD8_1746 fhaC1; putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPD8_3272 hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPD8_1745 hemolysin K11016 shlA; hemolysin
D YPD8_3273 putative hemolysin K11016 shlA; hemolysin
D YPD8_pCD0059 hypothetical protein K12341 yadA; adhesin YadA
D YPD8_0915 hypothetical protein K12342 yadB_C; adhesin YadB/C
D YPD8_0914 hypothetical protein K12342 yadB_C; adhesin YadB/C
D YPD8_0664 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_1294 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_0718 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_2558 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_3234 vgrG6; putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_3240 putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_0445 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_0440 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_0716 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_3260 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_1291 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_2566 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_2565 type VI secretion lipoprotein, family K11906 vasD; type VI secretion system protein VasD
D YPD8_1310 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YPD8_3251 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPD8_0451 lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPD8_1304 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_3243 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_3244 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_2559 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_0453 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_0714 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YPD8_3249 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YPD8_1289 membrane protein K11892 impK; type VI secretion system protein ImpK
D YPD8_2560 OmpA family protein K11892 impK; type VI secretion system protein ImpK
D YPD8_0452 OmpA domain protein K11892 impK; type VI secretion system protein ImpK
D YPD8_2563 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D YPD8_0444 Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPD8_0717 heat shock protein K11907 vasG; type VI secretion system protein VasG
D YPD8_3248 clpB2; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPD8_1292 clpA2; putative ATPase subunit of ATP-dependent protease K11907 vasG; type VI secretion system protein VasG
D YPD8_2575 clpB; putative Clp ATPase K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ypx02020]
D YPD8_2802 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YPD8_2803 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YPD8_2630 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D YPD8_1404 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPD8_2801 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YPD8_3630 pstS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YPD8_2098 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2099 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2097 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPD8_0124 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YPD8_0123 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YPD8_1060 ompC; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YPD8_0894 putative outer membrane porin C protein K09476 ompF; outer membrane pore protein F
D YPD8_0069 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPD8_0070 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YPD8_0504 hypothetical protein K25864 mzrA; modulator protein MzrA
D YPD8_1414 two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YPD8_1413 rstA; two-component regulatory system, response regulator protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D YPD8_2963 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPD8_0780 histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YPD8_0779 response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YPD8_2450 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YPD8_2449 baeR; transcriptional response regulatory protein (sensor BaeS) K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YPD8_2454 putitive HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D YPD8_2453 mdtC; multidrug resistance protein MdtC K07788 mdtB; multidrug efflux pump
D YPD8_2452 AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D YPD8_2451 yegB; hypothetical protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YPD8_2660 multidrug efflux protein K18324 acrD; multidrug efflux pump
D YPD8_3084 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPD8_3083 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YPD8_1515 conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPD8_1784 two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPD8_1783 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YPD8_2074 flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPD8_0643 flaA1; putative flagellin K02406 fliC; flagellin
D YPD8_0644 flaA2; putative flagellin K02406 fliC; flagellin
D YPD8_0645 flaA3; putative flagellin K02406 fliC; flagellin
D YPD8_1920 fliC; flagellin K02406 fliC; flagellin
D YPD8_0651 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D YPD8_1919 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D YPD8_0652 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_2073 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_2350 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YPD8_2349 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YPD8_2353 kdpA; potassium-transporting ATPase subunit A K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D YPD8_2352 potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D YPD8_2351 kdpC; potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D YPD8_3124 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YPD8_0398 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YPD8_3615 chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YPD8_2876 hypothetical protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D YPD8_1604 sfcA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YPD8_1823 narX; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YPD8_2659 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YPD8_0314 frdA; fumarate reductase K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPD8_0313 frdB; succinate dehydrogenase K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPD8_0312 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D YPD8_0311 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D YPD8_3531 regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YPD8_3532 ATP-binding region, ATPase-like protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YPD8_3535 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YPD8_3536 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YPD8_1542 GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YPD8_1237 rcsF; putative lipoprotein K06080 rcsF; RcsF protein
D YPD8_1065 two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YPD8_1062 hypothetical protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YPD8_1063 two-component sensor protein like yojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YPD8_1064 rcsB; probable two component response regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YPD8_2962 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YPD8_1899 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YPD8_1857 Histidine protein kinase sensor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YPD8_1856 putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YPD8_2044 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_2047 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_2043 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_2031 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_2045 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_3422 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPD8_1860 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPD8_0991 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPD8_3424 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2033 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2046 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2572 hypothetical protein K07347 fimD; outer membrane usher protein
D YPD8_pMT0060 caf1A; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPD8_0604 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D YPD8_0603 hypothetical protein K02280 cpaC; pilus assembly protein CpaC
D YPD8_0601 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YPD8_0600 putative type II secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YPD8_0599 hypothetical protein K12510 tadB; tight adherence protein B
D YPD8_0598 hypothetical protein K12511 tadC; tight adherence protein C
D YPD8_1209 (protein-PII) uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D YPD8_2400 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D YPD8_0024 ntrB; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YPD8_0023 ntrC; nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YPD8_0025 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPD8_3518 C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YPD8_3150 rpoN; DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor
D YPD8_2396 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPD8_2398 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YPD8_2060 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YPD8_1055 tsr2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YPD8_2186 chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YPD8_2062 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPD8_0860 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPD8_3582 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YPD8_2077 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YPD8_2078 methyl-accepting chemotaxis protein III (MCP-III) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YPD8_2061 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YPD8_2087 putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YPD8_2070 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YPD8_2071 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPD8_2058 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPD8_2059 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPD8_0228 two-component sensor/regulator K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D YPD8_0227 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YPD8_0620 sigma-54 transcriptional regulatory protein K10943 flrC; two-component system, response regulator FlrC
D YPD8_2284 putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_2285 glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YPD8_2286 glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YPD8_2287 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YPD8_0159 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YPD8_0731 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_1842 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPD8_1157 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YPD8_1156 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YPD8_1366 N-terminal fragment of inner membrane permease K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YPD8_1367 hypothetical protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YPD8_1369 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YPD8_0574 ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPD8_3410 rffE; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YPD8_3409 rffD; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YPD8_0366 pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YPD8_1963 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D YPD8_0721 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ypx02024]
D YPD8_2887 luxS; S-ribosylhomocysteinase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YPD8_0327 ymr; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D YPD8_1329 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YPD8_1328 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YPD8_1144 hypothetical protein K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPD8_1504 aroH; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPD8_2874 aroF; 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPD8_2396 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPD8_2398 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YPD8_2074 flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPD8_2349 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YPD8_1542 GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YPD8_0355 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YPD8_0357 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YPD8_0356 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YPD8_0358 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YPD8_0361 putative carbohydrate kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D YPD8_0360 transcriptional regulator, sorC family K11531 lsrR; lsr operon transcriptional repressor
D YPD8_0354 hypothetical protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D YPD8_2175 hypothetical protein K20268 rhiA; rhizosphere induced protein
D YPD8_2458 putative transport system periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPD8_1761 ABC transporter periplasmic binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPD8_1760 putative binding-protein-dependent transport system membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPD8_2460 putative ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPD8_2459 putative ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPD8_1759 putative binding-protein-dependent transport system membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPD8_2455 putitive ABC-transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YPD8_1758 MalK protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YPD8_3356 livK; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YPD8_3355 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YPD8_3354 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YPD8_3353 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YPD8_3352 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YPD8_2240 N-acylhomoserine lactone synthase YpeI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPD8_0709 ytbI; N-acylhomoserine lactone synthase YtbI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPD8_2239 ypeR; quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPD8_0708 yspR; quorum-sensing transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPD8_3520 pelY; periplasmic pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YPD8_0471 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_1716 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_0159 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YPD8_0278 regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YPD8_1343 ribA; GTP cyclohydrolase II protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YPD8_2781 ribD; riboflavin biosynthesis protein RibD (includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YPD8_3061 outer membrane protein, efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D YPD8_1439 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1630 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1629 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D YPD8_1628 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPD8_1627 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D YPD8_1626 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPD8_3030 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YPD8_2322 yntA; nickel ABC transporter, periplasmic nickel-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YPD8_3032 putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPD8_2324 dppB3; hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPD8_3033 putative transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPD8_2325 binding-protein-dependent transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPD8_2326 putative transport ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPD8_3034 putative ABC transporter transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPD8_3035 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPD8_2327 putative transport ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPD8_3616 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPD8_3304 secE; translocase K03073 secE; preprotein translocase subunit SecE
D YPD8_0203 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D YPD8_2788 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YPD8_0496 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPD8_3362 cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPD8_0064 secB; export protein SecB K03071 secB; preprotein translocase subunit SecB
D YPD8_2883 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ypx02030]
D YPD8_1055 tsr2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YPD8_2186 chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YPD8_2062 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPD8_0860 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPD8_3582 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YPD8_2077 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YPD8_2078 methyl-accepting chemotaxis protein III (MCP-III) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YPD8_2061 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YPD8_2087 putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YPD8_3264 malE; periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YPD8_0722 putative sugar ABC transporter periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_2200 sugar binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_3487 sugar-binding transport protein K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_1608 galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YPD8_3528 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YPD8_2071 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPD8_2070 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YPD8_2058 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPD8_2057 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YPD8_2059 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPD8_2060 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YPD8_0623 flagellar motor protein K02410 fliG; flagellar motor switch protein FliG
D YPD8_1931 fliG; flagellar motor protein K02410 fliG; flagellar motor switch protein FliG
D YPD8_0619 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D YPD8_1938 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D YPD8_0618 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_1939 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_0652 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_2073 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_0653 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D YPD8_2072 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ypx02040]
D YPD8_0621 fliE; putative flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D YPD8_1928 fliE; flagellar basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D YPD8_0622 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPD8_0623 flagellar motor protein K02410 fliG; flagellar motor switch protein FliG
D YPD8_1931 fliG; flagellar motor protein K02410 fliG; flagellar motor switch protein FliG
D YPD8_0624 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPD8_1932 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPD8_0625 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPD8_1933 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPD8_1934 fliJ; flagellar protein K02413 fliJ; flagellar protein FliJ
D YPD8_0649 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YPD8_1935 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D YPD8_1937 flagellar protein FliL K02415 fliL; flagellar protein FliL
D YPD8_0650 putative flagellar biogenesis protein K02415 fliL; flagellar protein FliL
D YPD8_0619 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D YPD8_1938 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D YPD8_0618 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_1939 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_1940 fliO; flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D YPD8_0617 fliP; putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D YPD8_1941 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D YPD8_0616 flagellar assembly protein K02421 fliR; flagellar biosynthesis protein FliR
D YPD8_1942 fliR; flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D YPD8_1967 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D YPD8_0614 hypothetical protein K02400 flhA; flagellar biosynthesis protein FlhA
D YPD8_1968 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D YPD8_0615 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPD8_1969 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPD8_0628 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPD8_1962 flgA; flagellar basal body P-ring biosynthesis protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPD8_0629 flgB; flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D YPD8_1961 flgB; flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D YPD8_1960 flgC; flagellar basal body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D YPD8_0630 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPD8_1959 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPD8_0631 flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D YPD8_1958 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D YPD8_0634 hypothetical protein K02391 flgF; flagellar basal-body rod protein FlgF
D YPD8_1957 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YPD8_0635 flgG; putative flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D YPD8_1956 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YPD8_0636 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YPD8_1955 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YPD8_0637 flgI; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YPD8_1954 flgI; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YPD8_1953 flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YPD8_0638 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D YPD8_1952 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D YPD8_0639 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPD8_1951 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPD8_0643 flaA1; putative flagellin K02406 fliC; flagellin
D YPD8_0644 flaA2; putative flagellin K02406 fliC; flagellin
D YPD8_0645 flaA3; putative flagellin K02406 fliC; flagellin
D YPD8_1920 fliC; flagellin K02406 fliC; flagellin
D YPD8_0646 fliD; putative flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D YPD8_1921 fliD; flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D YPD8_0647 fliS; putative flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D YPD8_1922 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YPD8_1923 fliT; FliT K02423 fliT; flagellar protein FliT
D YPD8_0652 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_2073 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_0653 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D YPD8_2072 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D YPD8_1963 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YPD8_0627 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D YPD8_1964 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YPD8_1916 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPD8_1918 fliZ; putative alternative sigma factor regulatory protein K02425 fliZ; regulator of sigma S factor FliZ
D YPD8_0557 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YPD8_0558 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YPD8_2074 flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPD8_3150 rpoN; DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor
D YPD8_0620 sigma-54 transcriptional regulatory protein K10943 flrC; two-component system, response regulator FlrC
D YPD8_0651 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D YPD8_1919 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D YPD8_2958 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D YPD8_3274 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection [PATH:ypx05135]
D YPD8_3475 hypothetical protein K13735 yeeJ; adhesin/invasin
D YPD8_pCD0059 hypothetical protein K12341 yadA; adhesin YadA
D YPD8_pCD0053 ypkA; secreted protein kinase K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D YPD8_pCD0011 yopT; Yop targeted effector K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YPD8_pCD0013 yopT; Yop targeted effector K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YPD8_pCD0003 yopE; putative outer membrane virulence protein K23473 yopE; outer membrane virulence protein YopE
D YPD8_pCD0050 yopH; putative secreted protein-tyrosine phosphatase K23474 yopH; tyrosine-protein phosphatase YopH [EC:3.1.3.48]
D YPD8_pCD0020 yopB; secreted effector protein K23475 yopB; transloator
D YPD8_pCD0019 yopD; secreted effector protein K23476 yopD; transloator
D YPD8_pCD0010 yopQ; Yop targeting protein K23477 yopQ; protein YopQ
D YPD8_pCD0017 yopM; secreted effector protein K23478 yopM; outer membrane protein YopM
D YPD8_pCD0052 yopJ; targeted effector protein K08598 yopJ; YopJ protease family
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D YPD8_3475 hypothetical protein K13735 yeeJ; adhesin/invasin
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ypx01501]
D YPD8_0894 putative outer membrane porin C protein K09476 ompF; outer membrane pore protein F
D YPD8_1060 ompC; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YPD8_2761 Beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YPD8_2115 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YPD8_1439 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1630 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1629 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D YPD8_1628 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPD8_1627 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D YPD8_1626 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPD8_3063 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_2736 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_3062 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_2737 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_0693 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPD8_3061 outer membrane protein, efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D YPD8_0574 ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPD8_0131 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPD8_2276 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YPD8_0480 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ypx01502]
D YPD8_0489 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPD8_0282 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YPD8_0483 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamino pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YPD8_0484 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YPD8_0487 UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ypx01503]
D YPD8_2098 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2099 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2097 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPD8_3537 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YPD8_2007 crcA; hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YPD8_1515 conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPD8_1514 pmrF; probable glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D YPD8_1513 hypothetical protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YPD8_1512 hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YPD8_1511 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YPD8_1510 hypothetical protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YPD8_1509 hypothetical protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D YPD8_3084 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPD8_3083 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YPD8_1472 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YPD8_1455 peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YPD8_1456 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YPD8_1457 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YPD8_1458 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YPD8_1459 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YPD8_3497 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YPD8_1234 copper homeostasis lipoprotein K06079 cutF; copper homeostasis protein (lipoprotein)
D YPD8_0069 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPD8_0070 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YPD8_0323 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_1191 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_1492 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D YPD8_2963 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPD8_0016 dsbA; secreted thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YPD8_0154 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YPD8_3063 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_2736 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_3062 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_2737 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_0693 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPD8_0574 ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPD8_1223 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ypx01000]
C 01001 Protein kinases [BR:ypx01001]
D YPD8_2011 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YPD8_pCD0053 ypkA; secreted protein kinase K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D YPD8_2802 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YPD8_2098 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2099 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_0124 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YPD8_1414 two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YPD8_0069 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPD8_0780 histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YPD8_2450 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YPD8_3084 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPD8_1784 two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPD8_2350 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YPD8_3124 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YPD8_2620 putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YPD8_1823 narX; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YPD8_3532 ATP-binding region, ATPase-like protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YPD8_3535 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YPD8_1062 hypothetical protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YPD8_1063 two-component sensor protein like yojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YPD8_1065 two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YPD8_2962 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YPD8_1857 Histidine protein kinase sensor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YPD8_3474 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YPD8_0024 ntrB; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YPD8_2396 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPD8_2071 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPD8_0228 two-component sensor/regulator K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:ypx01009]
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPD8_2727 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D YPD8_0382 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ypx01002]
D YPD8_0415 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D YPD8_0857 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YPD8_0605 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YPD8_pPCP0007 pla; plasminogen activator protease precursor K08566 pla; plasminogen activator [EC:3.4.23.48]
D YPD8_1054 pla2; putative outer membrane-associated protease K08566 pla; plasminogen activator [EC:3.4.23.48]
D YPD8_2363 pcp; putative pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D YPD8_2437 guaA; bifunctional GMP synthase/glutamine amidotransferase protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YPD8_0089 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YPD8_1016 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YPD8_1479 hypothetical protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YPD8_1508 nlpC; putative lipoprotein K13695 nlpC; probable lipoprotein NlpC
D YPD8_2513 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YPD8_3126 glutamate synthase (NADPH) large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YPD8_3631 glmS; D-fructose-6-phosphate amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YPD8_2294 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YPD8_pCD0052 yopJ; targeted effector protein K08598 yopJ; YopJ protease family
D YPD8_2771 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D YPD8_pCD0011 yopT; Yop targeted effector K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YPD8_pCD0013 yopT; Yop targeted effector K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YPD8_1492 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D YPD8_0898 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D YPD8_0710 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D YPD8_1135 hypothetical protein K07052 K07052; CAAX protease family protein
D YPD8_0891 pepN; putative aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YPD8_3499 opdA; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D YPD8_3497 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YPD8_3176 putative phage-related protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D YPD8_1187 ptrA; protease III precursor K01407 ptrA; protease III [EC:3.4.24.55]
D YPD8_3517 putative insulinase family protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D YPD8_3023 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YPD8_2419 pepB; aminopeptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YPD8_2670 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YPD8_0685 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D YPD8_2101 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D YPD8_2819 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YPD8_2837 N-carbamoyl-L-amino acid amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D YPD8_1728 peptidase, M23 family K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YPD8_1210 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YPD8_2923 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YPD8_3315 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D YPD8_0766 pepP; proline-specific aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D YPD8_1415 putative carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D YPD8_3079 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YPD8_2036 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D YPD8_0751 putative lipoprotein K07387 K07387; metalloprotease [EC:3.4.24.-]
D YPD8_2683 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D YPD8_1218 hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D YPD8_2532 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YPD8_2012 hypothetical protein K09933 mtfA; MtfA peptidase
D YPD8_1420 putative pepetidase K04775 ydgD; protease YdgD [EC:3.4.21.-]
D YPD8_2963 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPD8_3135 protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D YPD8_3137 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D YPD8_1977 ptrB; oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D YPD8_2273 penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPD8_0975 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPD8_1102 pbpG; penicillin-binding protein 7 precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YPD8_1058 putative penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YPD8_3082 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YPD8_2757 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D YPD8_2755 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D YPD8_1258 Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D YPD8_0277 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YPD8_2377 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YPD8_1976 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YPD8_2037 tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D YPD8_1648 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D YPD8_1336 sohB; peptidase family U7 protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D YPD8_1337 peptidase family U7 protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D YPD8_0107 peptidase, S54 (rhomboid) family protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D YPD8_0095 hslV; ATP-dependent protease peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D YPD8_2793 ggt; gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D YPD8_2447 protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D YPD8_3060 hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D YPD8_3059 putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D YPD8_3163 pmbA; Putative modulator of DNA gyrase K03592 pmbA; PmbA protein
D YPD8_3180 tldD; putative modulator of DNA gyrase K03568 tldD; TldD protein
D YPD8_1070 ecotin precursor K08276 eco; ecotin
D YPD8_2250 membrane protein K06894 yfhM; alpha-2-macroglobulin
D YPD8_0330 hflC; hypothetical protein K04087 hflC; modulator of FtsH protease HflC
D YPD8_0329 hflK; hypothetical protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ypx01003]
D YPD8_1801 putative glycosyl transferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D YPD8_3469 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YPD8_3122 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPD8_2501 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YPD8_2974 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YPD8_0131 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPD8_2249 hypothetical protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPD8_3401 wecG; putative UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YPD8_3403 4-alpha-L-fucosyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YPD8_3412 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YPD8_1828 hmsR; hemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ypx01005]
D YPD8_1223 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YPD8_1224 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YPD8_0493 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YPD8_1221 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YPD8_2689 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YPD8_0907 lpxK; tetraacyldisaccharide 4-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YPD8_1727 msbB; lipid A biosynthesis lauroyl acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YPD8_3216 lipid A biosynthesis lauroyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YPD8_1015 hypothetical protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YPD8_0053 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YPD8_1511 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YPD8_2007 crcA; hypothetical protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YPD8_1472 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YPD8_3537 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YPD8_1764 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YPD8_0905 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YPD8_3146 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YPD8_3145 hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YPD8_0054 rfaC; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YPD8_0052 kdtX; lipopolysaccharide core biosynthesis glycosyl transferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D YPD8_0055 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YPD8_0362 putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D YPD8_2831 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YPD8_1241 hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YPD8_0568 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YPD8_0056 rfaD; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YPD8_2717 wbyJ; putative mannosyltransferase K13000 wbyJ; mannosyltransferase [EC:2.4.1.-]
D YPD8_2715 wbyK; putative mannosyltransferase K13001 wbyK; mannosyltransferase [EC:2.4.1.-]
D YPD8_2710 wbyL; probable glycosyltransferase K13002 wbyL; glycosyltransferase [EC:2.4.1.-]
D YPD8_3402 wecF; putative enterobacterial common antigen polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D YPD8_3412 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ypx01011]
D YPD8_3138 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YPD8_3311 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YPD8_0488 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YPD8_0485 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YPD8_0482 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YPD8_0489 ddl; D-alanylalanine synthetase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPD8_0282 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D YPD8_3445 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YPD8_0484 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YPD8_0487 UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YPD8_0563 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPD8_0971 hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPD8_1747 mviN; hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D YPD8_0131 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPD8_2974 mrcB; penicillin-binding protein 1b K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YPD8_2501 hypothetical protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D YPD8_2276 pbpA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YPD8_0480 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YPD8_2273 penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPD8_0975 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPD8_3082 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YPD8_1058 putative penicillin-binding protein AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YPD8_1102 pbpG; penicillin-binding protein 7 precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YPD8_3122 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPD8_2249 hypothetical protein K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPD8_1492 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D YPD8_0898 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D YPD8_2532 mepA; penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YPD8_1479 hypothetical protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YPD8_1016 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YPD8_1728 peptidase, M23 family K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YPD8_3176 putative phage-related protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D YPD8_0392 putative soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YPD8_1192 membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D YPD8_1712 putative lipoprotein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YPD8_2585 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YPD8_0727 membrane-bound lytic murein transglycosylase C (Murein hydrolase C) K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D YPD8_1246 membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D YPD8_1527 putative membrane-bound lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D YPD8_2390 hypothetical protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D YPD8_2126 thymidylate kinase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D YPD8_2274 rlpA; rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YPD8_0323 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_1191 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_2027 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_3007 ampD; putative signalling protein in beta-lactamase regulation K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ypx01004]
D YPD8_1285 putative acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPD8_2131 fabD; acyl carrier protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPD8_1807 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YPD8_2132 fabH; 3-oxoacyl-(acyl carrier protein) synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YPD8_2527 fabB; 3-oxoacyl-(acyl carrier protein) synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPD8_1278 putative beta-ketoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPD8_0881 fabF; 3-oxoacyl-(acyl carrier protein) synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPD8_2129 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPD8_1279 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPD8_2130 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPD8_1257 fabA; 3-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YPD8_1222 fabZ; (3R)-hydroxymyristoyl ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPD8_1277 fabZ; myristoyl-acyl carrier dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPD8_3618 hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YPD8_2694 acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YPD8_2742 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YPD8_1317 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D YPD8_2752 hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D YPD8_1870 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YPD8_0225 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPD8_0471 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_1716 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_0275 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YPD8_2133 fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YPD8_0561 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YPD8_0583 acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ypx01008]
D YPD8_1538 putative phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YPD8_1870 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YPD8_1875 ybtE; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D YPD8_0678 putative siderophore biosysnthesis protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D YPD8_1873 yersiniabactin biosynthetic protein YbtU K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D YPD8_0676 hypothetical protein K12241 pchG; pyochelin biosynthesis protein PchG
D YPD8_1874 yersiniabactin biosynthetic protein YbtT K05374 irp4; yersiniabactin synthetase, thioesterase component
C 01006 Prenyltransferases [BR:ypx01006]
D YPD8_2774 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YPD8_3088 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YPD8_1216 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YPD8_0326 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YPD8_0093 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YPD8_0274 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YPD8_2767 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ypx01007]
D YPD8_2609 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPD8_2301 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YPD8_2980 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YPD8_1465 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPD8_0144 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YPD8_2687 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YPD8_1744 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPD8_1595 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YPD8_0414 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YPD8_3025 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YPD8_2282 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPD8_0787 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YPD8_1737 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPD8_0893 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YPD8_2430 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YPD8_3591 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YPD8_3590 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YPD8_0923 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YPD8_1235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YPD8_1525 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YPD8_2891 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YPD8_1522 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YPD8_1521 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YPD8_0895 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPD8_3599 aminotransferase, classes I and II K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YPD8_2149 aat; aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPD8_2601 hypothetical protein K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D YPD8_0283 tyrB; aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPD8_1569 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPD8_0057 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YPD8_1124 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YPD8_2627 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPD8_0157 hypothetical protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D YPD8_1821 argD; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YPD8_2457 goaG; 4-aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPD8_2970 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YPD8_3436 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPD8_0913 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPD8_2841 hypothetical protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
D YPD8_1515 conserved hypothetical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPD8_3405 rffA; putative lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ypx00194]
D YPD8_3633 atpC; ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YPD8_3634 ATP synthase beta subunit protein K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YPD8_3635 atpG; ATP synthase subunit C K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YPD8_3636 atpA; ATP synthase subunit A K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YPD8_3637 atpH; ATP synthase subunit D K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YPD8_3638 atpF; ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YPD8_3639 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YPD8_3640 atpI; ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ypx03000]
D YPD8_1375 araC; arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D YPD8_0293 rhaR; L-rhamnose operon transcriptional activator K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D YPD8_0292 rhaS; L-rhamnose operon regulatory protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D YPD8_2344 cel operon repressor K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D YPD8_1869 ybtA; transcriptional regulator YbtA K05372 ybtA; AraC family transcriptional regulator
D YPD8_0396 putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YPD8_pCD0037 virF; transcriptional regulator K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D YPD8_0068 bifunctional regulatory protein/DNA repair protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YPD8_1196 glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D YPD8_3429 ilvY; LysR-family transcriptional regulatory protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D YPD8_3338 metR; lysR-family transcriptional regulatory protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D YPD8_0411 nhaR; transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D YPD8_3451 oxyR; oxidative stress transcriptional regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D YPD8_0760 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YPD8_0470 LysR-family transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D YPD8_1339 cysB; transcriptional regulator for cysteine regulon K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D YPD8_2205 putative LlysR-family transcriptional regulatory protein K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D YPD8_0080 transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D YPD8_3170 probable lysR-family transcriptional regulatory protein K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D YPD8_3440 transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D YPD8_0973 deoR; deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D YPD8_0106 glpR; glycerol-3-phosphate repressor protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D YPD8_0836 DeoR-family regulatory protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D YPD8_2914 putative deoR-family regulatory protein K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D YPD8_0817 lactose operon repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D YPD8_0535 LacI-family regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPD8_0659 cytR; transcription repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPD8_0867 galR; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPD8_1389 putative LacI-family transcriptional regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPD8_2015 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPD8_2204 putative LacI-family transcriptional regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPD8_3554 putative AraC-family transcriptional regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPD8_0097 cytR; transcriptional repressor K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D YPD8_0475 fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D YPD8_3157 treR; trehalose repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D YPD8_3481 gntR; gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D YPD8_2169 putative LacI-family transcriptional regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D YPD8_3038 phnF; probable gntR-family transcriptional regulatory protein K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D YPD8_1811 hutC; putative GntR-family transcriptional regulatory protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D YPD8_1886 GntR-family putative transcriptional regulatory protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D YPD8_1663 fadR; fatty acid metabolism regulator K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D YPD8_3004 pdhR; transcriptional regulator of pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YPD8_1013 transcriptional regulatory protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D YPD8_0507 exuR; exu regulon transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D YPD8_2456 putative GntR-family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YPD8_1111 betI; transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D YPD8_2735 acrR; putative tetR-family transcriptional regulatory protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D YPD8_0045 TetR-family regulatory protein K05501 slmA; TetR/AcrR family transcriptional regulator
D YPD8_1473 TetR-family transcriptional regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YPD8_3449 TetR-family transcriptional regulatory protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D YPD8_0002 asnC; regulatory protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D YPD8_0927 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPD8_2082 AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPD8_2747 probable AsnC-family regulatory protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D YPD8_2239 ypeR; quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPD8_0708 yspR; quorum-sensing transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPD8_0109 maltose regulon positive regulatory protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D YPD8_1470 slyA; transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D YPD8_2852 emrR; MarR-family transcriptional regulatory protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D YPD8_2699 cueR; putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YPD8_0208 zntR; zinc-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D YPD8_2305 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D YPD8_0278 regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YPD8_3276 repressor of aceBA operon K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D YPD8_2028 kdgR; IclR-family transcriptional regulatory protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D YPD8_0159 crp; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YPD8_1406 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D YPD8_2413 hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D YPD8_0332 hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D YPD8_2929 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D YPD8_1725 hexR; hex regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D YPD8_3310 birA; biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YPD8_0393 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D YPD8_0461 hypothetical protein K11925 sgrR; SgrR family transcriptional regulator
D YPD8_0384 nadR; nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YPD8_0790 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D YPD8_3503 putative regulatory protein K02647 cdaR; carbohydrate diacid regulator
D YPD8_1133 modE; molybdenum transport protein ModE K02019 modE; molybdate transport system regulatory protein
D YPD8_0100 metJ; transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D YPD8_1911 putA2; bifunctional PutA protein (includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate) K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YPD8_2759 bolA; BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D YPD8_pCD0005 plasmid partition protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_pMT0074 parB; partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_pMT0080 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_3320 rfaH; transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D YPD8_3091 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D YPD8_2296 nagC; putative N-acetylglucosamine regulatory protein K02565 nagC; N-acetylglucosamine repressor
D YPD8_1386 mlc; putative ROK family transcriptional regulatory protein K15545 mlc; transcriptional regulator of PTS gene
D YPD8_3586 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D YPD8_1446 tyrR; transcriptional regulatory protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D YPD8_2679 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D YPD8_1453 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D YPD8_1451 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YPD8_0360 transcriptional regulator, sorC family K11531 lsrR; lsr operon transcriptional repressor
D YPD8_3160 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D YPD8_0743 hypothetical protein K07735 algH; putative transcriptional regulator
D YPD8_2979 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D YPD8_2782 hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D YPD8_2814 crl; curlin genes regulatory protein K11926 crl; sigma factor-binding protein Crl
D YPD8_0477 hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ypx03021]
D YPD8_0206 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YPD8_3298 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YPD8_3297 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YPD8_0557 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YPD8_0558 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YPD8_2938 rpoS; RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D YPD8_2371 rpoE; RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YPD8_3359 rpoH; RNA polymerase sigma factor K03089 rpoH; RNA polymerase sigma-32 factor
D YPD8_3150 rpoN; DNA-directed RNA polymerase subunit N K03092 rpoN; RNA polymerase sigma-54 factor
D YPD8_0651 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D YPD8_1919 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D YPD8_0455 ATP-dependent helicase HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D YPD8_3074 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D YPD8_2779 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D YPD8_3303 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D YPD8_3130 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D YPD8_3129 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D YPD8_2372 rseA; sigma E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D YPD8_2373 rseB; periplasmic negative regulator of sigmaE K03598 rseB; sigma-E factor negative regulatory protein RseB
D YPD8_2374 rseC; sigma E factor regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D YPD8_2979 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D YPD8_3081 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D YPD8_0122 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D YPD8_3413 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ypx03019]
D YPD8_2138 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YPD8_3184 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YPD8_2378 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YPD8_0333 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YPD8_0319 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YPD8_3415 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YPD8_3066 deaD; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YPD8_3380 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YPD8_2958 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPD8_3068 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YPD8_3413 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D YPD8_0074 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPD8_0408 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D YPD8_0306 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPD8_0327 ymr; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D YPD8_2464 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YPD8_2981 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D YPD8_0874 dinucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YPD8_3189 hypothetical protein K18765 csrD; RNase E specificity factor CsrD
D YPD8_0092 S-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D YPD8_3027 hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D YPD8_3152 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D YPD8_1423 hrpA; helicase, ATP-dependent K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D YPD8_2976 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ypx03011]
D YPD8_0910 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YPD8_1211 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YPD8_0193 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YPD8_0205 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YPD8_0201 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YPD8_3110 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YPD8_0182 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YPD8_0199 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YPD8_3131 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YPD8_0187 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YPD8_0181 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YPD8_0204 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YPD8_0198 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YPD8_3301 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YPD8_0191 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D YPD8_0188 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YPD8_0189 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YPD8_0197 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YPD8_3109 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YPD8_3300 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YPD8_3302 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YPD8_3299 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YPD8_3132 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YPD8_0195 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YPD8_0202 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YPD8_0194 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YPD8_0207 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YPD8_0200 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YPD8_2880 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YPD8_1523 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YPD8_3087 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YPD8_0192 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YPD8_0190 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YPD8_0196 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YPD8_r11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r7 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r6 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r9 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r5 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r8 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ypx03009]
D YPD8_2378 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YPD8_2011 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YPD8_0319 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YPD8_2379 era; GTP-binding protein Era K03595 era; GTPase
D YPD8_3085 putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D YPD8_2979 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D YPD8_3074 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D YPD8_2779 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D YPD8_3303 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D YPD8_1024 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D YPD8_0430 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D YPD8_0211 hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D YPD8_0368 ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D YPD8_3363 hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D YPD8_0745 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D YPD8_3641 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YPD8_0478 mraW; S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D YPD8_3117 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D YPD8_3498 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D YPD8_2005 rrmA; rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D YPD8_0334 putative methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D YPD8_3080 ftsJ; cell division protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D YPD8_2183 hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D YPD8_0518 putative methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D YPD8_2277 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D YPD8_1271 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D YPD8_3500 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D YPD8_0887 hypothetical protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D YPD8_1198 hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D YPD8_2426 hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D YPD8_0961 23S rRNA (uracil-5-)-methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D YPD8_0435 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YPD8_1332 RNA pseudouridylate synthase-family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D YPD8_1333 putative RNA pseudouridylate synthase-family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D YPD8_2137 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D YPD8_2865 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D YPD8_2090 putative pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D YPD8_2855 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YPD8_0370 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D YPD8_1749 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D YPD8_2882 rimM; 16S rRNA-processing protein K02860 rimM; 16S rRNA processing protein RimM
D YPD8_0917 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D YPD8_3197 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D YPD8_2534 hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D YPD8_2100 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D YPD8_2138 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YPD8_3184 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YPD8_0742 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D YPD8_1981 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D YPD8_3066 deaD; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YPD8_2368 srmB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D YPD8_0318 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YPD8_2433 GTP-binding protein EngA K03977 engA; GTPase
D YPD8_0328 hflX; GTP-binding protein K03665 hflX; GTPase
D YPD8_0217 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YPD8_0038 spoT; guanosine-3,5-bisbis(diphosphate) 3-pyrophosphydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YPD8_3072 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D YPD8_3075 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D YPD8_2278 hypothetical protein K09710 ybeB; ribosome-associated protein
D YPD8_2290 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D YPD8_3585 hypothetical protein K14762 yibL; ribosome-associated protein
D YPD8_3164 hypothetical protein K09889 yjgA; ribosome-associated protein
D YPD8_2867 putative sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D YPD8_1774 hypothetical protein K06942 ychF; ribosome-binding ATPase
D YPD8_2134 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ypx03016]
D YPD8_0564 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D YPD8_2609 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPD8_1235 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YPD8_0414 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YPD8_2282 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPD8_1595 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YPD8_2301 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YPD8_1744 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPD8_0787 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YPD8_1737 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPD8_2891 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YPD8_0893 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YPD8_1525 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YPD8_0923 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YPD8_2687 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YPD8_3025 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YPD8_2430 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YPD8_1522 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YPD8_1521 pheT; phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YPD8_1465 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPD8_0144 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YPD8_0029 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D YPD8_2119 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YPD8_0729 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D YPD8_1236 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D YPD8_2519 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D YPD8_3071 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D YPD8_2942 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D YPD8_2414 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_1668 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_0217 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YPD8_0326 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YPD8_3617 thdF; tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D YPD8_3642 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YPD8_1646 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YPD8_3102 cysQ; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YPD8_1477 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D YPD8_0043 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D YPD8_1354 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D YPD8_1715 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D YPD8_2977 ligT; putative 2-5 RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D YPD8_0386 ATPase K06020 ettA; energy-dependent translational throttle protein EttA
D YPD8_3591 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YPD8_3590 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YPD8_2980 glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YPD8_2702 hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D YPD8_2389 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D YPD8_0279 hypothetical protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D YPD8_3198 hypothetical protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D YPD8_1103 hypothetical protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D YPD8_2292 tRNA-thiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D YPD8_1740 hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D YPD8_1741 hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D YPD8_0903 smtA; putative methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D YPD8_3447 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D YPD8_2881 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D YPD8_2855 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YPD8_0037 tRNA (guanosine-2-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D YPD8_2412 putative SpoU-family rRNA methylase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D YPD8_0067 putative methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D YPD8_2369 hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D YPD8_1205 hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D YPD8_0435 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YPD8_2092 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YPD8_1435 hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D YPD8_3368 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YPD8_0180 hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YPD8_0179 hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YPD8_1272 sulfite reductase K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YPD8_0777 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D YPD8_2790 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D YPD8_2751 hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YPD8_2955 6-pyruvoyl tetrahydrobiopterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YPD8_2956 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YPD8_1201 hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YPD8_0320 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D YPD8_2789 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D YPD8_2772 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPD8_2773 thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPD8_1229 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D YPD8_1230 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D YPD8_2672 putative acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D YPD8_1718 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D YPD8_0560 gcp; putative glycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D YPD8_0322 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D YPD8_1193 hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D YPD8_0333 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YPD8_3068 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ypx03012]
D YPD8_1349 hypothetical protein K03113 EIF1; translation initiation factor 1
D YPD8_3073 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D YPD8_1524 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YPD8_0172 ATPase K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D YPD8_1212 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D YPD8_3305 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D YPD8_0184 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D YPD8_0183 elongation factor G K02355 fusA; elongation factor G
D YPD8_3573 selB; selenocysteinyl-tRNA-specific translation factor K03833 selB; selenocysteine-specific elongation factor
D YPD8_1768 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D YPD8_1214 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D YPD8_1767 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YPD8_1773 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D YPD8_1010 efp2; elongation factor P K02356 efp; elongation factor P
D YPD8_0309 efp; elongation factor P K02356 efp; elongation factor P
D YPD8_0315 lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D YPD8_0308 iron-sulfur cluster-binding protein, KamA family K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D YPD8_2530 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D YPD8_0786 prfB; peptide chain release factor RF-2 K02836 prfB; peptide chain release factor 2
D YPD8_0371 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D YPD8_1233 hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ypx03110]
D YPD8_0933 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D YPD8_2863 Clp ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D YPD8_2756 clpX; ATP-dependent protease ATP-binding subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D YPD8_0094 hslU; ATP-dependent protease ATP-binding subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D YPD8_2727 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D YPD8_0408 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D YPD8_2417 hscA; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D YPD8_2461 putative heat shock protein K04046 yegD; hypothetical chaperone protein
D YPD8_0306 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPD8_0409 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YPD8_0434 djlA; Dna-J like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D YPD8_2416 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D YPD8_0126 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D YPD8_1167 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YPD8_3603 ibpA; heat shock protein K04080 ibpA; molecular chaperone IbpA
D YPD8_3602 ibpB; heat shock protein K04081 ibpB; molecular chaperone IbpB
D YPD8_0127 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D YPD8_2963 gsrA; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPD8_3079 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YPD8_3639 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YPD8_2031 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_2045 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_3422 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPD8_0064 secB; export protein SecB K03071 secB; preprotein translocase subunit SecB
D YPD8_0071 cpxP; hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D YPD8_2337 hypothetical protein K19778 hdeB; acid stress chaperone HdeB
D YPD8_2909 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D YPD8_2594 oxidoreductase component K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D YPD8_2304 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D YPD8_0154 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YPD8_2688 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D YPD8_2754 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D YPD8_0177 fkpA; peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D YPD8_3105 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D YPD8_0416 slpA; FKBX-type 16KD peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D YPD8_0176 slyD; peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D YPD8_0432 surA; survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D YPD8_3414 trxA; thioredoxin 1 K03671 TXN; thioredoxin
D YPD8_2857 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D YPD8_2696 putative thioredoxin K05838 ybbN; putative thioredoxin
D YPD8_1478 hypothetical protein K07390 grxD; monothiol glutaredoxin
D YPD8_0016 dsbA; secreted thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YPD8_1665 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D YPD8_0784 dsbC; thiol:disulfide interchange protein (DsbC) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YPD8_0301 dsbD; thiol:disulfide interchange protein precursor K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D YPD8_2543 ccmG; thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ypx04131]
D YPD8_2425 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YPD8_1652 glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YPD8_1141 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPD8_1726 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_1488 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_2727 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:ypx04121]
C 03051 Proteasome [BR:ypx03051]
D YPD8_2727 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ypx03032]
D YPD8_1249 rnhA; ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YPD8_3615 chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YPD8_0281 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YPD8_0559 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YPD8_0286 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YPD8_1226 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_pMT0054 DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_3614 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPD8_3024 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPD8_2280 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPD8_2124 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPD8_1250 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_1251 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_2730 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPD8_0369 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPD8_1225 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YPD8_0018 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPD8_0040 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_2613 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_1383 tus; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D YPD8_1706 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPD8_0141 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPD8_2346 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D YPD8_2685 DNA replication initiation factor K10763 hda; DnaA-homolog protein
D YPD8_1066 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YPD8_3612 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YPD8_0582 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YPD8_0579 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YPD8_1338 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YPD8_1645 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ypx03036]
D YPD8_2378 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YPD8_1636 hns; DNA-binding protein Hns K03746 hns; DNA-binding protein H-NS
D YPD8_0396 putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YPD8_3615 chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YPD8_3120 phosphosugar isomerase K12961 diaA; DnaA initiator-associating protein
D YPD8_1270 hypothetical protein K11940 hspQ; heat shock protein HspQ
D YPD8_2191 dps; DNA protection during starvation conditions K04047 dps; starvation-inducible DNA-binding protein
D YPD8_0327 ymr; RNA-binding protein Hfq K03666 hfq; host factor-I protein
D YPD8_0760 iciA; chromosome replication initiation inhibitor protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YPD8_0927 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPD8_2082 AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPD8_0900 mukB; condesin subunit B K03632 mukB; chromosome partition protein MukB
D YPD8_0901 hypothetical protein K03804 mukE; chromosome partition protein MukE
D YPD8_0902 mukF; condesin subunit F K03633 mukF; chromosome partition protein MukF
D YPD8_0491 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YPD8_2945 ftsB; cell divison protein FtsB K05589 ftsB; cell division protein FtsB
D YPD8_3361 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YPD8_0480 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YPD8_0926 putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YPD8_0479 ftsL; putative cell division protein K03586 ftsL; cell division protein FtsL
D YPD8_0096 ftsN; cell division protein K03591 ftsN; cell division protein FtsN
D YPD8_0490 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D YPD8_0486 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YPD8_3360 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D YPD8_0492 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YPD8_2614 cell division protein K03528 zipA; cell division protein ZipA
D YPD8_0764 hypothetical protein K09888 zapA; cell division protein ZapA
D YPD8_0889 hypothetical protein K18657 zapC; cell division protein ZapC
D YPD8_3014 hypothetical protein K18778 zapD; cell division protein ZapD
D YPD8_3133 hypothetical protein K06916 zapE; cell division protein ZapE
D YPD8_3106 hypothetical protein K07269 ytfB; cell division protein YtfB
D YPD8_0323 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_1191 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_3063 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_2736 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_1713 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D YPD8_1714 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D YPD8_1262 sulA; putative cell division inhibitor K13053 sulA; cell division inhibitor SulA
D YPD8_0045 TetR-family regulatory protein K05501 slmA; TetR/AcrR family transcriptional regulator
D YPD8_2346 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D YPD8_3188 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YPD8_3187 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D YPD8_3186 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D YPD8_2275 rodA; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D YPD8_pCD0006 plasmid partitioning transcription repressor K03496 parA; chromosome partitioning protein
D YPD8_pCD0005 plasmid partition protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_pMT0074 parB; partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_pMT0080 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_0582 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YPD8_0579 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YPD8_3642 gidA; glucose-inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YPD8_3641 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YPD8_3390 xerC; tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D YPD8_0783 xerD; tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D YPD8_1594 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YPD8_0020 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ypx03400]
D YPD8_1405 ogt; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YPD8_2355 phrB; putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D YPD8_2364 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YPD8_0728 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YPD8_1357 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YPD8_0497 mutator protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YPD8_0046 dut; deoxyuridine 5-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YPD8_0068 bifunctional regulatory protein/DNA repair protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YPD8_1927 glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YPD8_3592 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YPD8_0050 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YPD8_1643 xthA; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YPD8_0990 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YPD8_3286 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D YPD8_0785 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPD8_0040 ligA2; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_2613 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPD8_0018 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPD8_0285 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D YPD8_1120 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D YPD8_1897 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YPD8_1898 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YPD8_3388 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YPD8_3298 rpoB; DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YPD8_3297 rpoC; DNA-directed RNA polymerase beta subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YPD8_0206 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YPD8_2937 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YPD8_0324 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D YPD8_0873 DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D YPD8_1559 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YPD8_2435 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YPD8_1226 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_pMT0054 DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPD8_3614 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPD8_3024 holC; DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPD8_2280 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPD8_2124 holB; DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPD8_1250 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_1251 DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPD8_2730 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPD8_0369 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPD8_0286 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YPD8_1706 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPD8_0141 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPD8_1188 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YPD8_1186 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YPD8_1189 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YPD8_2893 recA; recombinase A K03553 recA; recombination protein RecA
D YPD8_1733 ruvA; Holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D YPD8_1732 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YPD8_1734 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YPD8_0098 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YPD8_2732 priC; primosomal replication protein n K04067 priC; primosomal replication protein N''
D YPD8_2805 periplasmic binding transport protein K03546 sbcC; DNA repair protein SbcC/Rad50
D YPD8_2804 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D YPD8_0383 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D YPD8_3613 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF
D YPD8_0036 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YPD8_2380 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D YPD8_2728 recombination protein RecR K06187 recR; recombination protein RecR
D YPD8_1169 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D YPD8_2807 rdgC; recombination associated protein K03554 rdgC; recombination associated protein RdgC
D YPD8_2228 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D YPD8_1025 putative DEAD box helicase family protein K19789 radD; DNA repair protein RadD
D YPD8_0155 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D YPD8_1066 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YPD8_3612 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YPD8_1338 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YPD8_3380 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YPD8_1636 hns; DNA-binding protein Hns K03746 hns; DNA-binding protein H-NS
D YPD8_2820 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D YPD8_0277 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YPD8_0456 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D YPD8_2892 recX; RecA regulator RecX K03565 recX; regulatory protein
D YPD8_3417 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D YPD8_1266 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D YPD8_1075 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YPD8_1719 putative DEAD box family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YPD8_2316 nrdE; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPD8_1068 nrdA; ribonucleotide-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPD8_1069 nrdB; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPD8_2315 nrdF; ribonucleotide-diphosphate reductase beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ypx03029]
D YPD8_3073 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D YPD8_1524 infC; protein chain initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YPD8_1212 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D YPD8_3305 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D YPD8_0184 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D YPD8_0183 elongation factor G K02355 fusA; elongation factor G
D YPD8_2379 era; GTP-binding protein Era K03595 era; GTPase
D YPD8_1465 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPD8_2282 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPD8_1737 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPD8_1744 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPD8_0286 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D YPD8_1219 putative surface antigen K07277 SAM50; outer membrane protein insertion porin family
D YPD8_0408 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D YPD8_1167 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YPD8_0306 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPD8_0409 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YPD8_2414 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_1668 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_2416 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB
D YPD8_1478 hypothetical protein K07390 grxD; monothiol glutaredoxin
D YPD8_1594 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YPD8_2767 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YPD8_3616 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPD8_2727 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ypx02000]
D YPD8_0673 ABC-transporter transmembrane protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPD8_1868 lipoprotein inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPD8_0672 ABC-transporter transmembrane protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPD8_1866 inner membrane ABC-transporter YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPD8_0908 msbA; probable transport ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YPD8_2746 mdlA; probable ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPD8_2745 mdlB; probable ATP transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPD8_1366 N-terminal fragment of inner membrane permease K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YPD8_1369 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YPD8_0089 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YPD8_2266 ABC transporter, ATP-binding protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YPD8_2010 putative ABC transporter (ATP-binding protein) K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YPD8_3456 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YPD8_0930 cydC; transport ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YPD8_0929 transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YPD8_0935 putative ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YPD8_2623 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YPD8_0886 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D YPD8_2636 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YPD8_0075 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YPD8_2635 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YPD8_2634 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YPD8_2633 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YPD8_1132 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YPD8_0076 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D YPD8_1131 modB; molybdate transport permease protein K02018 modB; molybdate transport system permease protein
D YPD8_1130 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YPD8_1134 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D YPD8_0165 tauA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YPD8_0168 taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YPD8_0166 tauB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YPD8_3223 ssuA; solute-binding periplasmic protein of aliphatic sulfonates, ABC transporter K15553 ssuA; sulfonate transport system substrate-binding protein
D YPD8_3221 ssuC; putative aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D YPD8_3220 ssuB; putative aliphatic sulfonates transport ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YPD8_2667 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPD8_2586 sfuA; iron(III)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPD8_2666 putative binding protein-dependent transport system, inner-membrane component K02011 afuB; iron(III) transport system permease protein
D YPD8_2587 yfuB; inner membrane permease of iron ABC transporter K02011 afuB; iron(III) transport system permease protein
D YPD8_2665 probable ABC-transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPD8_2588 iron(III)-transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPD8_0460 thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D YPD8_0459 cysU; sulfate/thiosulfate ABC transporter, permease protein CysT K02063 thiP; thiamine transport system permease protein
D YPD8_0458 thiamine transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YPD8_0966 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein
D YPD8_0963 potI; putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D YPD8_0964 potH; putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D YPD8_0965 potG; putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YPD8_2458 putative transport system periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPD8_1761 ABC transporter periplasmic binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPD8_1760 putative binding-protein-dependent transport system membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPD8_2460 putative ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPD8_2459 putative ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPD8_1759 putative binding-protein-dependent transport system membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPD8_2455 putitive ABC-transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YPD8_1758 MalK protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YPD8_2312 proX; glycine betaine/L-proline ABC transporter, periplasmic glycine betaine-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YPD8_2313 proW; glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D YPD8_2314 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YPD8_1084 yehZ1; hypothetical protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YPD8_1083 ABC type periplasmic choline/glycine/betaine binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D YPD8_1080 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPD8_1082 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPD8_1081 putative ABC transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YPD8_1392 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D YPD8_1393 putative transport system permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D YPD8_3264 malE; periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YPD8_3265 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D YPD8_3266 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D YPD8_3263 malK; maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_2217 mtlK; putative mannitol transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_0807 sugar transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_1881 putative binding-protein-dependent transport system, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_0533 transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_3051 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_0808 sugar-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YPD8_0809 sugar-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YPD8_0810 putative maltodextrin transport permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPD8_0811 putative maltodextrin permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPD8_1372 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D YPD8_1374 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D YPD8_1373 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YPD8_2023 putative sugar-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YPD8_2020 ABC sugar transporter (permease) K10193 togM; oligogalacturonide transport system permease protein
D YPD8_2021 putative sugar ABC transporter (permease) K10194 togN; oligogalacturonide transport system permease protein
D YPD8_2022 putative sugar ABC transporter K10195 togA; oligogalacturonide transport system ATP-binding protein
D YPD8_1608 galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YPD8_1606 mglC; beta-methylgalactoside transporter inner membrane component K10541 mglC; methyl-galactoside transport system permease protein
D YPD8_1607 mglA; galactoside transport ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YPD8_3558 sugar-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YPD8_3555 sugar transport system permease protein K10544 xylH; D-xylose transport system permease protein
D YPD8_3557 sugar transport ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YPD8_0722 putative sugar ABC transporter periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_2200 sugar binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_3487 sugar-binding transport protein K10439 rbsB; ribose transport system substrate-binding protein
D YPD8_0724 sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPD8_2203 rbsC; putative sugar transport system, permease protein K10440 rbsC; ribose transport system permease protein
D YPD8_3488 sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPD8_0723 mglA; putative sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPD8_2202 rbsA; putative sugar transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPD8_3489 sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPD8_3444 putative periplasmic protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YPD8_3441 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPD8_3442 sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPD8_3443 putative sugar transport system ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YPD8_2905 sugar ABC transporter, periplasmic protein K17202 eryG; erythritol transport system substrate-binding protein
D YPD8_2902 putative sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YPD8_2903 putative sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YPD8_0804 sugar-binding periplasmic protein K17205 xltC; putative xylitol transport system substrate-binding protein
D YPD8_0805 sugar transport system permease K17206 xltB; putative xylitol transport system permease protein
D YPD8_0806 sugar transport ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D YPD8_2257 putative sugar-binding periplasmic protein K17208 ibpA; inositol transport system substrate-binding protein
D YPD8_2259 sugar transport system permease protein K17209 iatP; inositol transport system permease protein
D YPD8_2258 rbsA; ATP-binding component of D-ribose high-affinity transport system K17210 iatA; inositol transport system ATP-binding protein
D YPD8_3344 ugpB; glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YPD8_3343 ugpA; sn-glycerol-3-phosphate transport system, permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YPD8_3342 ugpE; sn-glycerol-3-phosphate transport system, permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YPD8_3341 sn-glycerol-3-phosphate transport, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YPD8_0355 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YPD8_0357 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YPD8_0356 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YPD8_0358 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YPD8_3141 hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YPD8_3142 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YPD8_3143 putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YPD8_3140 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D YPD8_3139 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D YPD8_1884 exported solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPD8_3054 putative sugar binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPD8_0536 sugar ABC transporter, periplasmic sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPD8_2220 putative solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPD8_0537 putative permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPD8_1883 putative binding-protein-dependent transport system, inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPD8_2221 sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPD8_3053 sugar transport system, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPD8_0538 putative permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPD8_1882 putative binding-protein-dependent transport system, inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPD8_2222 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPD8_3052 sugar transport system, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPD8_3215 periplasmic binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPD8_2915 putative sugar ABC transporter, periplasmic protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPD8_1947 putative sugar-binding periplasmic protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPD8_1598 sugar ABC transporter K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPD8_1002 periplasmic carbohydrate-binding transport protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPD8_1000 putative ABC transport integral membrane subunit K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_1564 ribose transport system, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_1945 permease of ABC transporter K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_1948 sugar transport system permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_2918 putative sugar ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_2919 putative sugar ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_3212 putative ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_3213 putative branched-chain amino acid transport system, permease component K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_3227 putative carbohydrate transport protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPD8_3214 ABC transporter ATP binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_1001 putative ABC transport ATP-binding subunit K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_1562 hypothetical protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_1563 ATPase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_1946 putative sugar ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_2917 putative sugar ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPD8_2801 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YPD8_3630 pstS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YPD8_3629 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPD8_2465 putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPD8_3628 phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPD8_2466 pstA; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPD8_3627 pstB; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPD8_2467 pstb; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPD8_1096 putative substrate-binding periplasmic transport protein K02044 phnD; phosphonate transport system substrate-binding protein
D YPD8_1094 ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YPD8_1095 inner membrane permease of ABC transporter K02042 phnE; phosphonate transport system permease protein
D YPD8_1097 putative ABC transport ATP-binding subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YPD8_2509 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D YPD8_2510 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YPD8_2508 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_2511 histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D YPD8_2189 glnH; glutamine ABC transporter periplasmic-binding protein K10036 glnH; glutamine transport system substrate-binding protein
D YPD8_2188 glnP; glutamine ABC transporter permease component K10037 glnP; glutamine transport system permease protein
D YPD8_2187 glnQ; glutamine ABC transporter ATP-binding component K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_0960 hypothetical protein K09996 artJ; arginine transport system substrate-binding protein
D YPD8_0949 artI; arginine-binding periplasmic protein 1 precursor K09997 artI; arginine transport system substrate-binding protein
D YPD8_0951 artM; arginine transport system permease protein K09998 artM; arginine transport system permease protein
D YPD8_0950 artQ; arginine transport system permease protein K09999 artQ; arginine transport system permease protein
D YPD8_0948 artP; arginine transport ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_2287 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YPD8_2285 glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YPD8_2286 glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YPD8_2284 putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_1916 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPD8_1915 putative amino-acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D YPD8_1914 putative amino-acid ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_3356 livK; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YPD8_3355 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YPD8_3354 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YPD8_3353 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YPD8_3352 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YPD8_1238 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D YPD8_0978 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D YPD8_1239 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D YPD8_0976 putative ABC transport integral membrane subunit K02072 metI; D-methionine transport system permease protein
D YPD8_1240 abc; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YPD8_0977 putative ABC transport ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D YPD8_1092 putative substrate-binding periplasmic transport protein K11959 urtA; urea transport system substrate-binding protein
D YPD8_1091 putative Branched-chain amino acid transport system, permease component K11960 urtB; urea transport system permease protein
D YPD8_1090 putative Branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein
D YPD8_1089 putative ABC transport ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D YPD8_1088 livF; ATP-binding component of ABC transporter K11963 urtE; urea transport system ATP-binding protein
D YPD8_1121 putative amino acid transporter K11963 urtE; urea transport system ATP-binding protein
D YPD8_3624 putative periplasmic solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YPD8_2845 putative amino acid ABC transporter, periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YPD8_2843 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPD8_2844 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPD8_3622 putative amino acid transport system permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPD8_3623 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPD8_2842 putative amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YPD8_1439 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1630 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPD8_1629 oppB; oligopeptide permease ABC transporter membrane component K15581 oppB; oligopeptide transport system permease protein
D YPD8_1628 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPD8_1627 oppD; oligopeptide transporter ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D YPD8_1626 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPD8_3528 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YPD8_3527 dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D YPD8_3526 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D YPD8_3525 dppD; dipeptide ABC transporter, ATP-binding protein DppD K12371 dppD; dipeptide transport system ATP-binding protein
D YPD8_3524 dppF; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D YPD8_1455 peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YPD8_1456 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YPD8_1457 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YPD8_1458 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YPD8_1459 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YPD8_3030 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YPD8_2322 yntA; nickel ABC transporter, periplasmic nickel-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YPD8_3032 putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPD8_2324 dppB3; hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPD8_3033 putative transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPD8_2325 binding-protein-dependent transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPD8_2326 putative transport ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPD8_3034 putative ABC transporter transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPD8_3035 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPD8_2327 putative transport ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPD8_1018 substrate-binding transport protein K13893 yejA; microcin C transport system substrate-binding protein
D YPD8_1019 putative ABC transporter integral membrane subunit K13894 yejB; microcin C transport system permease protein
D YPD8_1020 putative ABC transporter integral membrane subunit K13895 yejE; microcin C transport system permease protein
D YPD8_1021 putative ABC transporter ATP-binding subunit K13896 yejF; microcin C transport system ATP-binding protein
D YPD8_2972 fhuD; ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YPD8_2971 ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YPD8_2973 fhuC; ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YPD8_0249 hmuT; hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D YPD8_0248 hmuU; hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein
D YPD8_0247 hmuV; hemin transport system ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D YPD8_0611 fepB; ferric enterobactin (enterochelin) binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YPD8_1581 putative iron-siderophore transport system, periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D YPD8_1582 putative iron-siderophore transport system, transmembrane component K23186 fepD; iron-siderophore transport system permease protein
D YPD8_1583 putative iron-siderophore transport system, membrane permease component K23187 fepG; iron-siderophore transport system permease protein
D YPD8_1584 fepC; ferric enterobactin ABC transporter, ATP-binding protein FepC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YPD8_3546 putative iron transport protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D YPD8_3548 putative iron transport permease K25283 yclO; iron-siderophore transport system permease protein
D YPD8_3547 iron transport permease K25284 yclN; iron-siderophore transport system permease protein
D YPD8_3549 putative iron ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D YPD8_0726 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YPD8_0985 yiuA; putative periplasmic substrate-binding transport protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YPD8_0957 btuC1; FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D YPD8_0984 ABC transporter, iron chelate uptake transporter (FeCT) family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D YPD8_0955 putative transport ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YPD8_0983 putative siderophore ABC transporter, ATP-binding subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YPD8_2966 vitamin B12-transporter protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D YPD8_1518 btuC2; vtamin B12-transporter permease K06073 btuC; vitamin B12 transport system permease protein
D YPD8_1516 vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YPD8_1729 znuA; exported high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D YPD8_1731 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D YPD8_1730 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YPD8_1528 periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D YPD8_1530 yfeC; chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D YPD8_1531 yfeD; chelated iron transport system membrane protein K11606 sitD; manganese/iron transport system permease protein
D YPD8_1529 yfeB; ATP-binding transport protein K11607 sitB; manganese/iron transport system ATP-binding protein
D YPD8_3022 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D YPD8_3021 membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D YPD8_3149 cysA; sulfate transport ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YPD8_2104 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPD8_2106 lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPD8_2105 lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YPD8_2546 ccmD; putative heme exporter protein D K02196 ccmD; heme exporter protein D
D YPD8_2547 ccmC; putative heme exporter protein C K02195 ccmC; heme exporter protein C
D YPD8_2548 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D YPD8_2549 ccmA; putative heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YPD8_3360 ftsX; cell division protein K09811 ftsX; cell division transport system permease protein
D YPD8_3361 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YPD8_2988 putative ABC transporter, integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YPD8_2989 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YPD8_1615 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YPD8_2692 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D YPD8_1836 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YPD8_1837 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YPD8_1617 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YPD8_2693 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YPD8_1835 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YPD8_1496 putative ATP-dependent transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein
D YPD8_1377 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YPD8_0660 Sodium:sulfate symporter-family protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D YPD8_1487 multidrug efflux protein NorA K26939 norM; MATE family, multidrug efflux pump
D YPD8_1547 putative sugar transporter K26937 dinF; MATE family, multidrug efflux pump
D YPD8_1536 hypothetical protein K02532 lacY; MFS transporter, OHS family, lactose permease
D YPD8_0462 hypothetical protein K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D YPD8_1106 hypothetical protein K11537 xapB; MFS transporter, NHS family, xanthosine permease
D YPD8_0405 putative transport protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YPD8_2637 putative sialic acid transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D YPD8_0819 putative sugar transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YPD8_0508 exuT; ExuT transport protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YPD8_1988 hpaX; putative 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D YPD8_1554 transmembrane transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D YPD8_2406 transport permease protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D YPD8_3531 regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YPD8_0871 hypothetical protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D YPD8_2761 Beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YPD8_1023 bcr; probable drug resistance translocator protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YPD8_1660 putative multidrug resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YPD8_3569 mdfA; multidrug translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YPD8_1750 hypothetical protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D YPD8_0864 putative sugar transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YPD8_2854 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D YPD8_2030 putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D YPD8_2451 yegB; hypothetical protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YPD8_2705 rosA; putative membrane efflux protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D YPD8_1384 hypothetical protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D YPD8_2069 hypothetical protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D YPD8_0922 putative MFS family transporter protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D YPD8_1865 ybtX; putative signal transducer K05373 ybtX; MFS transporter, putative signal transducer
D YPD8_0150 tsgA; major facilitator family transporter TsgA K06141 tsgA; MFS transporter, TsgA protein
D YPD8_2237 putative transporter protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D YPD8_2617 ptsI; PTS system, enzyme I component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YPD8_0875 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YPD8_0352 phosphocarrier, HPr family K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D YPD8_0998 fruB; hypothetical protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YPD8_2618 crr; glucose-specific PTS system enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPD8_2122 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YPD8_0814 PTS transport protein K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199]
D YPD8_2299 pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YPD8_3158 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YPD8_0996 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YPD8_0349 PTS system, IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D YPD8_0350 PTS system, IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D YPD8_0351 PTS system, IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D YPD8_3588 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YPD8_2343 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YPD8_2341 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YPD8_2342 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YPD8_1998 manX; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPD8_1999 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPD8_2000 PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPD8_0829 hypothetical protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YPD8_0832 manX; putative PTS transport protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YPD8_0831 putative PTS permease protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YPD8_0830 putative PTS permease protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YPD8_2140 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YPD8_2503 ulaA; ascorbate-specific PTS system enzyme IIC K03475 ulaA; ascorbate PTS system EIIC component
D YPD8_3151 ptsN; phosphotransferase system enzyme IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D YPD8_0087 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D YPD8_2338 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D YPD8_2743 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D YPD8_1463 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPD8_0981 putative glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPD8_3130 sspA; stringent starvation protein A K03599 sspA; stringent starvation protein A
D YPD8_2628 membrane protein K07114 yfbK; Ca-activated chloride channel homolog
D YPD8_0918 focA; putative formate transporter 1 K06212 focA; formate transporter
D YPD8_0146 nirC; putative nitrite transporter K02598 nirC; nitrite transporter
D YPD8_0209 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D YPD8_2733 kefA; potassium efflux system KefA K05802 mscK; potassium-dependent mechanosensitive channel
D YPD8_0316 membrane transport protein K22051 mscM; miniconductance mechanosensitive channel
D YPD8_0757 hypothetical protein K03442 mscS; small conductance mechanosensitive channel
D YPD8_2227 membrane protein K16053 ybdG; miniconductance mechanosensitive channel
D YPD8_2462 mgtE; putative divalent cation transport protein K06213 mgtE; magnesium transporter
D YPD8_2335 putative urea transporter K08717 utp; urea transporter
D YPD8_0652 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_2073 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_0653 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D YPD8_2072 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D YPD8_0592 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D YPD8_0593 ExbD/TolR-family transport protein K03559 exbD; biopolymer transport protein ExbD
D YPD8_1154 tolQ; TolQ colicin import protein K03562 tolQ; biopolymer transport protein TolQ
D YPD8_1153 tolR; TolR colicin import membrane protein K03560 tolR; biopolymer transport protein TolR
D YPD8_3384 corA; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D YPD8_1438 hypothetical protein K16074 zntB; zinc transporter
D YPD8_2270 ccrB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D YPD8_2339 ccrB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D YPD8_2340 membrane protein K06199 crcB; fluoride exporter
D YPD8_2885 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YPD8_0894 putative outer membrane porin C protein K09476 ompF; outer membrane pore protein F
D YPD8_1076 ompC2; outer membrane protein C2 K11929 phoE; outer membrane pore protein E
D YPD8_1060 ompC; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YPD8_0816 maltoporin K02024 lamB; maltoporin
D YPD8_3262 lamB; maltoporin precursor K02024 lamB; maltoporin
D YPD8_1261 ompA; putative outer membrane porin A protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D YPD8_2195 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D YPD8_2405 ail; attachment invasion locus protein K16078 ail; attachment invasion locus protein
D YPD8_2539 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D YPD8_1860 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPD8_0991 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPD8_3424 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2033 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2046 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2572 hypothetical protein K07347 fimD; outer membrane usher protein
D YPD8_pMT0060 caf1A; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPD8_0690 yapH; putative autotransporter protein K12678 aidA-I; autotransporter family porin
D YPD8_3446 vitamin B12 receptor protein K16092 btuB; vitamin B12 transporter
D YPD8_3457 hemophore HasA K12545 hasA; heme acquisition protein HasA
D YPD8_3458 putative TonB dependent receptor protein K16152 hasR; heme acquisition protein HasR
D YPD8_1876 fyuA; pesticin/yersiniabactin receptor protein K15721 fyuA; pesticin/yersiniabactin receptor
D YPD8_1579 iron-siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D YPD8_2926 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D YPD8_0982 putative outer membrane protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D YPD8_0251 hmuR; hemin receptor precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D YPD8_2003 fcuA; ferrichrome receptor FcuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPD8_0151 putative membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPD8_0699 iutA; putative ferric siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPD8_0684 putative TonB-dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPD8_0725 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPD8_0574 ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPD8_3061 outer membrane protein, efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D YPD8_1219 putative surface antigen K07277 SAM50; outer membrane protein insertion porin family
D YPD8_2432 putative lipoprotein K17713 bamB; outer membrane protein assembly factor BamB
D YPD8_2677 dapX; lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D YPD8_2866 putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D YPD8_1170 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D YPD8_3097 hypothetical protein K07278 tamA; translocation and assembly module TamA
D YPD8_3096 hypothetical protein K09800 tamB; translocation and assembly module TamB
D YPD8_3521 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D YPD8_2024 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein
D YPD8_3148 hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D YPD8_3147 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D YPD8_0433 imp; organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D YPD8_2281 rare lipoprotein B precursor K03643 lptE; LPS-assembly lipoprotein
D YPD8_pCD0020 yopB; secreted effector protein K23475 yopB; transloator
D YPD8_pCD0019 yopD; secreted effector protein K23476 yopD; transloator
D YPD8_0295 hypothetical protein K19298 subB; subtilase cytotoxin, subunit B
D YPD8_2289 hypothetical protein K06189 corC; hemolysin (HlyC) family protein
D YPD8_1601 hypothetical protein K06518 cidA; holin-like protein
D YPD8_1057 transport protein K16210 togT; oligogalacturonide transporter
D YPD8_0987 lysP; putative lysine-specific permease K11733 lysP; lysine-specific permease
D YPD8_3005 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D YPD8_2008 aroP1; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D YPD8_2799 proY; proline permease transport protein K11736 proY; proline-specific permease ProY
D YPD8_1902 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D YPD8_1844 L-asparagine permease K11738 ansP; L-asparagine permease
D YPD8_3539 amino acid permease K16234 hutT; histidine transporter
D YPD8_1411 putative amino acid antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D YPD8_1079 amino acid permease K03759 adiC; arginine:agmatine antiporter
D YPD8_0569 asoB; putative permease K16263 yjeH; amino acid efflux transporter
D YPD8_1145 zinc transporter ZitB K16264 czcD; cobalt-zinc-cadmium efflux system protein
D YPD8_0073 fieF; ferrous iron efflux protein F K13283 fieF; ferrous-iron efflux pump FieF
D YPD8_3062 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_2737 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_0693 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPD8_2660 multidrug efflux protein K18324 acrD; multidrug efflux pump
D YPD8_2453 mdtC; multidrug resistance protein MdtC K07788 mdtB; multidrug efflux pump
D YPD8_2452 AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D YPD8_1433 quaternary ammonium compound-resistance protein K03297 emrE; small multidrug resistance pump
D YPD8_0310 sugE; putative chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE
D YPD8_1721 integral membrane protein K11742 mdtI; spermidine export protein MdtI
D YPD8_1722 integral membrane protein K11743 mdtJ; spermidine export protein MdtJ
D YPD8_2348 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D YPD8_2194 hypothetical protein K11939 rhtA; inner membrane transporter RhtA
D YPD8_0294 rhaT; L-rhamnose-proton symport protein K02856 rhaT; L-rhamnose-H+ transport protein
D YPD8_3383 hypothetical protein K05786 rarD; chloramphenicol-sensitive protein RarD
D YPD8_1510 hypothetical protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YPD8_0669 gntP; putative gluconate transporter K16321 gntP; high-affinity gluconate transporter
D YPD8_3480 gntT1; putative gluconate permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D YPD8_3504 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D YPD8_0303 dcuA; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D YPD8_2876 hypothetical protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D YPD8_1110 high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D YPD8_1824 chaA; calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D YPD8_3144 putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D YPD8_3492 phosphate transport protein K16322 pit; low-affinity inorganic phosphate transporter
D YPD8_3196 panF; sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter
D YPD8_1908 putP; proline permease K11928 putP; sodium/proline symporter
D YPD8_0223 actP; acetate permease K14393 actP; cation/acetate symporter
D YPD8_0226 gltP; proton glutamate symport protein K11102 gltP; proton glutamate symport protein
D YPD8_3518 C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YPD8_0514 sstT; sodium/serine (threonine) transporter K07862 sstT; serine/threonine transporter
D YPD8_0035 gltS; sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D YPD8_0410 nhaA; sodium-proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D YPD8_1664 nhaB; Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D YPD8_3218 putative Na(+)/H(+) exchanger protein K24163 nhaK; monovalent cation/hydrogen antiporter
D YPD8_0175 kefB; glutathione-regulated potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D YPD8_0174 glutathione-regulated potassium-efflux system ancillary protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D YPD8_2706 potassium antiporter K26735 KEA4_5_6; K+:H+ antiporter
D YPD8_3312 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D YPD8_0210 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein
D YPD8_0034 membrane permease K16345 xanP; xanthine permease XanP
D YPD8_3219 putative xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D YPD8_3620 Xanthine/uracil permeases family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D YPD8_2608 nupC; nucleoside permease K11535 nupC; nucleoside transport protein
D YPD8_1072 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D YPD8_1009 tyrP; tyrosine-specific transport protein K03835 mtr; tryptophan-specific transport protein
D YPD8_0974 serine transporter K03837 sdaC; serine transporter
D YPD8_0245 putative transmembrane transport protein K26603 yhjV; inner membrane transport protein
D YPD8_2969 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D YPD8_1388 membrane protein K03281 clcA; chloride channel protein, CIC family
D YPD8_2336 putative nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D YPD8_1763 sUL1; sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D YPD8_2607 mntH; putative manganese transport protein MntH K03322 mntH; manganese transport protein
D YPD8_2930 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D YPD8_3404 wzxE; putative lipopolysaccharide biosynthesis protein K16693 wzxE; enterobacterial common antigen flippase
D YPD8_1747 mviN; hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D YPD8_2434 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D YPD8_3339 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D YPD8_0006 kup; potassium transport protein K03549 kup; KUP system potassium uptake protein
D YPD8_0758 arginine exporter protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D YPD8_3378 rhtB; putative homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D YPD8_3379 rhtC; threonine efflux protein K05835 rhtC; threonine efflux protein
D YPD8_0422 putative LysE type translocator K05835 rhtC; threonine efflux protein
D YPD8_2850 putative amino acid transporter K26605 azlC; branched chain amino acid efflux pump
D YPD8_2851 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D YPD8_3168 membrane protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D YPD8_0542 hypothetical protein K15547 mdtO; multidrug resistance protein MdtO
D YPD8_2682 hypothetical protein K03548 perM; putative permease
D YPD8_3369 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D YPD8_1526 marC; multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D YPD8_0486 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YPD8_2002 hypothetical protein K23242 mntP; manganese efflux pump family protein
D YPD8_1907 hypothetical protein K07243 FTR; high-affinity iron transporter
D YPD8_1840 hypothetical protein K07243 FTR; high-affinity iron transporter
D YPD8_1906 hypothetical protein K07224 efeO; iron uptake system component EfeO
D YPD8_1905 hypothetical protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D YPD8_1839 hypothetical protein K07230 p19; periplasmic iron binding protein
D YPD8_2409 membrane protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D YPD8_3454 hypothetical protein K03832 tonB; periplasmic protein TonB
D YPD8_1622 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D YPD8_1149 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D YPD8_1152 tolA; cell envelope integrity inner membrane protein TolA K03646 tolA; colicin import membrane protein
D YPD8_1150 tolB; translocation protein TolB precursor K03641 tolB; TolB protein
D YPD8_2591 dmsA; putative dimethyl sulfoxide reductase chain A protein K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPD8_2912 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPD8_2592 dmsB; putative dimethyl sulfoxide reductase chain B protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPD8_2911 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPD8_2593 dmsC; putative dimethyl sulfoxide reductase chain C protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YPD8_2910 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YPD8_2853 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D YPD8_0543 putative HlyD family secretion protein K15549 mdtN; membrane fusion protein, multidrug efflux system
D YPD8_3455 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YPD8_1367 hypothetical protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YPD8_0090 hypothetical protein K13408 cvaA; membrane fusion protein
D YPD8_3063 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_2736 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_2454 putitive HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D YPD8_0936 HlyD family secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YPD8_2622 putative HlyD family secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YPD8_3169 putative HlyD family secretion protein K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D YPD8_1146 intergral membrane NMN transport protein PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D YPD8_0119 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D YPD8_3494 uspB; universal stress protein UspB K06144 uspB; universal stress protein B
D YPD8_2544 ccmF; putative cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D YPD8_1432 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YPD8_2076 Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YPD8_1973 putative copper resistance protein D K07245 pcoD; copper resistance protein D
D YPD8_1974 putative copper resistance protein K07156 copC; copper resistance protein C
D YPD8_1654 hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:ypx02044]
D YPD8_0574 ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPD8_1366 N-terminal fragment of inner membrane permease K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D YPD8_1369 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YPD8_1367 hypothetical protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D YPD8_3456 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YPD8_3455 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YPD8_0090 hypothetical protein K13408 cvaA; membrane fusion protein
D YPD8_0089 hypothetical protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D YPD8_0848 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YPD8_0849 general secretion protein K02453 gspD; general secretion pathway protein D
D YPD8_0850 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YPD8_0851 hofF; general protein secretion protein K02455 gspF; general secretion pathway protein F
D YPD8_0852 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YPD8_0853 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D YPD8_0854 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YPD8_0855 L-like GSP protein K02461 gspL; general secretion pathway protein L
D YPD8_0857 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YPD8_0858 putative lipoprotein K02465 gspS; general secretion pathway protein S
D YPD8_2427 putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D YPD8_0739 hypothetical protein K02669 pilT; twitching motility protein PilT
D YPD8_0605 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YPD8_0604 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D YPD8_0603 hypothetical protein K02280 cpaC; pilus assembly protein CpaC
D YPD8_0601 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YPD8_0600 putative type II secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YPD8_0599 hypothetical protein K12510 tadB; tight adherence protein B
D YPD8_0598 hypothetical protein K12511 tadC; tight adherence protein C
D YPD8_0597 hypothetical protein K12512 tadD; tight adherence protein D
D YPD8_0596 hypothetical protein K12513 tadE; tight adherence protein E
D YPD8_0595 hypothetical protein K12514 tadF; tight adherence protein F
D YPD8_0594 hypothetical protein K12515 tadG; tight adherence protein G
D YPD8_0878 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A
D YPD8_1183 putative prepilin peptidase dependent protein K02680 ppdB; prepilin peptidase dependent protein B
D YPD8_1185 putative prepilin peptidase dependent protein K02681 ppdC; prepilin peptidase dependent protein C
D YPD8_3009 ppdD; putative prepilin peptidase dependent protein D precursor K02682 ppdD; prepilin peptidase dependent protein D
D YPD8_3010 hofB; putative type II secretion system protein K02504 hofB; protein transport protein HofB
D YPD8_3011 type II secretion system protein K02505 hofC; protein transport protein HofC
D YPD8_0133 hypothetical protein K12288 hofM; pilus assembly protein HofM
D YPD8_0134 hypothetical protein K12289 hofN; pilus assembly protein HofN
D YPD8_0135 membrane protein K12290 hofO; pilus assembly protein HofO
D YPD8_0137 putative membrane transport protein K02507 hofQ; protein transport protein HofQ
D YPD8_0736 hypothetical protein K02221 yggT; YggT family protein
D YPD8_2753 hypothetical protein K02237 comEA; competence protein ComEA
D YPD8_0909 hypothetical protein K02238 comEC; competence protein ComEC
D YPD8_0229 possible type III secretion protein K03219 yscC; type III secretion protein C
D YPD8_pCD0039 yscC; outer membrane secretin precursor K03219 yscC; type III secretion protein C
D YPD8_0230 putative type-III secretion protein K03220 yscD; type III secretion protein D
D YPD8_pCD0041 yscD; virulence protein K03220 yscD; type III secretion protein D
D YPD8_pCD0044 lcrO; type III secretion apparatus component K04053 yscI; type III secretion protein I
D YPD8_0232 type III secretion system apparatus lipoprotein K03222 yscJ; type III secretion protein J
D YPD8_pCD0045 ylpB; needle complex inner membrane lipoprotein K03222 yscJ; type III secretion protein J
D YPD8_pCD0046 yscK; type III secretion apparatus component K04054 yscK; type III secretion protein K
D YPD8_pCD0047 yscL; type III secretion protein K03223 yscL; type III secretion protein L
D YPD8_0236 flagellum-specific ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPD8_pCD0029 yscN; type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPD8_pCD0030 yscO; type III secretion apparatus component K04056 yscO; type III secretion protein O
D YPD8_pCD0031 yscP; type III secretion apparatus component K04057 yscP; type III secretion protein P
D YPD8_0239 type III secretion protein K03225 yscQ; type III secretion protein Q
D YPD8_pCD0032 yscQ; type III secretion protein K03225 yscQ; type III secretion protein Q
D YPD8_0240 putative type III secretion apparatus protein K03226 yscR; type III secretion protein R
D YPD8_pCD0033 yscR; needle complex export protein K03226 yscR; type III secretion protein R
D YPD8_0241 putative type III secretion apparatus protein K03228 yscT; type III secretion protein T
D YPD8_pCD0034 yscT; needle complex export protein K03228 yscT; type III secretion protein T
D YPD8_0242 putative type III secretion apparatus protein K03229 yscU; type III secretion protein U
D YPD8_pCD0035 yscU; needle complex export protein K03229 yscU; type III secretion protein U
D YPD8_0235 secretion system apparatus protein K03230 yscV; type III secretion protein V
D YPD8_pCD0024 yscV; low calcium response protein D K03230 yscV; type III secretion protein V
D YPD8_pCD0028 lcrE; secretion control protein K04058 yscW; type III secretion protein W
D YPD8_pCD0026 yscX; hypothetical protein K04059 yscX; type III secretion protein X
D YPD8_pCD0038 yscB; type III secretion apparatus component K04049 yscB; type III secretion protein B
D YPD8_pCD0042 yscG; type III secretion apparatus component K04051 yscG; type III secretion protein G
D YPD8_pCD0043 yopR; secreted protein K04052 yscH; type III secretion protein H
D YPD8_pCD0048 lcrQ; LCR negative regulator K04055 yscM; type III secretion protein M
D YPD8_pCD0025 yscY; hypothetical protein K04060 yscY; type III secretion protein Y
D YPD8_0614 hypothetical protein K02400 flhA; flagellar biosynthesis protein FlhA
D YPD8_1968 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D YPD8_0615 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPD8_1969 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPD8_0622 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPD8_0624 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPD8_1932 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPD8_0625 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPD8_1933 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPD8_0618 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_1939 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_1940 fliO; flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D YPD8_0617 fliP; putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D YPD8_1941 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D YPD8_0616 flagellar assembly protein K02421 fliR; flagellar biosynthesis protein FliR
D YPD8_1942 fliR; flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D YPD8_0784 dsbC; thiol:disulfide interchange protein (DsbC) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YPD8_0690 yapH; putative autotransporter protein K12678 aidA-I; autotransporter family porin
D YPD8_pCD0059 hypothetical protein K12341 yadA; adhesin YadA
D YPD8_0915 hypothetical protein K12342 yadB_C; adhesin YadB/C
D YPD8_0914 hypothetical protein K12342 yadB_C; adhesin YadB/C
D YPD8_1746 fhaC1; putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPD8_3272 hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPD8_1745 hemolysin K11016 shlA; hemolysin
D YPD8_3273 putative hemolysin K11016 shlA; hemolysin
D YPD8_1304 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_3243 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_3244 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_2559 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_0453 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D YPD8_0714 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YPD8_3249 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D YPD8_1289 membrane protein K11892 impK; type VI secretion system protein ImpK
D YPD8_2560 OmpA family protein K11892 impK; type VI secretion system protein ImpK
D YPD8_0452 OmpA domain protein K11892 impK; type VI secretion system protein ImpK
D YPD8_2563 type IV / VI secretion system protein, DotU family K11892 impK; type VI secretion system protein ImpK
D YPD8_0713 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPD8_3250 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPD8_1288 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPD8_2564 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPD8_0443 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPD8_1309 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPD8_3253 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPD8_2577 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPD8_0442 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YPD8_1308 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YPD8_2576 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YPD8_0441 hypothetical protein K11897 impF; type VI secretion system protein ImpF
D YPD8_2555 hypothetical protein K11897 impF; type VI secretion system protein ImpF
D YPD8_0439 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPD8_0712 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPD8_3258 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPD8_1287 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPD8_2567 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPD8_0711 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPD8_3259 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPD8_1286 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPD8_2568 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPD8_0438 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPD8_2578 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D YPD8_0437 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D YPD8_0440 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_0716 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_3260 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_1291 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_2566 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPD8_0664 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_1294 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_0718 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_2558 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_3234 vgrG6; putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_3240 putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_0445 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPD8_1311 hypothetical protein K11905 K11905; type VI secretion system protein
D YPD8_3257 hypothetical protein K11905 K11905; type VI secretion system protein
D YPD8_2565 type VI secretion lipoprotein, family K11906 vasD; type VI secretion system protein VasD
D YPD8_1310 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YPD8_3251 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPD8_0451 lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPD8_0444 Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPD8_0717 heat shock protein K11907 vasG; type VI secretion system protein VasG
D YPD8_3248 clpB2; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPD8_1292 clpA2; putative ATPase subunit of ATP-dependent protease K11907 vasG; type VI secretion system protein VasG
D YPD8_2575 clpB; putative Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPD8_1305 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D YPD8_3245 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D YPD8_1312 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D YPD8_3241 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D YPD8_3242 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D YPD8_3252 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D YPD8_2556 hypothetical protein K11898 impE; type VI secretion system protein ImpE
D YPD8_3246 hypothetical protein K11909 vasI; type VI secretion system protein VasI
D YPD8_3421 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2032 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2035 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2574 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_1858 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2031 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_2045 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_3422 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPD8_1860 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPD8_0991 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPD8_3424 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2033 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2046 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2572 hypothetical protein K07347 fimD; outer membrane usher protein
D YPD8_pMT0060 caf1A; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPD8_2044 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_2047 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_2043 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_0608 outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D YPD8_3564 hypothetical protein K12518 papC; outer membrane usher protein PapC
D YPD8_0609 fimbrial chaperone protein K12519 papD; chaperone protein PapD
D YPD8_0496 secA; translocase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPD8_0064 secB; export protein SecB K03071 secB; preprotein translocase subunit SecB
D YPD8_2787 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YPD8_3304 secE; translocase K03073 secE; preprotein translocase subunit SecE
D YPD8_2786 secF; protein export protein SecF K03074 secF; preprotein translocase subunit SecF
D YPD8_0495 SecA regulator SecM K13301 secM; secretion monitor
D YPD8_0203 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D YPD8_2883 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YPD8_3362 cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPD8_2788 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D YPD8_3616 membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPD8_3327 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YPD8_3326 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ypx02042]
D YPD8_0295 hypothetical protein K19298 subB; subtilase cytotoxin, subunit B
D YPD8_3178 tccC1; toxin subunit K11021 tccC; insecticidal toxin complex protein TccC
D YPD8_3179 putative insecticidal toxin K11021 tccC; insecticidal toxin complex protein TccC
D YPD8_1417 insecticidal toxin K11021 tccC; insecticidal toxin complex protein TccC
D YPD8_1475 sepC; insecticidal toxin K11021 tccC; insecticidal toxin complex protein TccC
D YPD8_2885 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YPD8_1745 hemolysin K11016 shlA; hemolysin
D YPD8_3273 putative hemolysin K11016 shlA; hemolysin
D YPD8_1746 fhaC1; putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPD8_3272 hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPD8_0775 putative hemolysin III K11068 hlyIII; hemolysin III
D YPD8_pMT0067 murine toxin K11009 ymt; murine toxin
C 02022 Two-component system [BR:ypx02022]
D YPD8_2802 phoR; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YPD8_2803 phoB; positive response regulator for pho regulon K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YPD8_2630 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D YPD8_2098 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2099 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2097 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPD8_0124 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YPD8_0123 ompR; osmolarity response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YPD8_1414 two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YPD8_1413 rstA; two-component regulatory system, response regulator protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D YPD8_0069 cpxA; two-component sensor protein K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPD8_0070 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YPD8_0780 histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YPD8_0779 response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YPD8_2450 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D YPD8_2449 baeR; transcriptional response regulatory protein (sensor BaeS) K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YPD8_3084 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPD8_3083 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YPD8_1784 two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPD8_1783 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YPD8_2350 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YPD8_2349 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YPD8_3124 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YPD8_0398 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YPD8_2620 putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YPD8_2621 putative two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D YPD8_1823 narX; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YPD8_2659 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YPD8_3532 ATP-binding region, ATPase-like protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YPD8_3535 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D YPD8_3536 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YPD8_1542 GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YPD8_1065 two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YPD8_1062 hypothetical protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YPD8_1063 two-component sensor protein like yojN K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D YPD8_1064 rcsB; probable two component response regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YPD8_2962 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YPD8_1899 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YPD8_1857 Histidine protein kinase sensor K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D YPD8_1856 putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YPD8_3474 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YPD8_2875 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D YPD8_0024 ntrB; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YPD8_0023 ntrC; nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YPD8_2396 Putative sensor-like histidine kinase YfhK K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPD8_2398 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YPD8_2071 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPD8_2058 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPD8_2059 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPD8_0228 two-component sensor/regulator K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D YPD8_0227 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YPD8_0620 sigma-54 transcriptional regulatory protein K10943 flrC; two-component system, response regulator FlrC
D YPD8_1638 probable response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:ypx02035]
D YPD8_2071 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPD8_2070 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YPD8_2060 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YPD8_2059 cheB; chemotaxis-specific methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPD8_2058 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPD8_2057 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YPD8_1055 tsr2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YPD8_2186 chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YPD8_2062 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPD8_0860 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPD8_3582 tar; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YPD8_2077 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YPD8_2078 methyl-accepting chemotaxis protein III (MCP-III) K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D YPD8_2061 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D YPD8_2087 putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YPD8_0624 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPD8_1932 fliH; flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPD8_0625 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPD8_1933 fliI; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPD8_1934 fliJ; flagellar protein K02413 fliJ; flagellar protein FliJ
D YPD8_1940 fliO; flagellar biosynthesis protein K02418 fliO; flagellar protein FliO/FliZ
D YPD8_0617 fliP; putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D YPD8_1941 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D YPD8_0616 flagellar assembly protein K02421 fliR; flagellar biosynthesis protein FliR
D YPD8_1942 fliR; flagellar biosynthesis protein K02421 fliR; flagellar biosynthesis protein FliR
D YPD8_0614 hypothetical protein K02400 flhA; flagellar biosynthesis protein FlhA
D YPD8_1968 flhA; flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D YPD8_0615 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPD8_1969 flhB; flagellar biosynthesis protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPD8_1967 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D YPD8_0623 flagellar motor protein K02410 fliG; flagellar motor switch protein FliG
D YPD8_1931 fliG; flagellar motor protein K02410 fliG; flagellar motor switch protein FliG
D YPD8_0619 hypothetical protein K02416 fliM; flagellar motor switch protein FliM
D YPD8_1938 fliM; flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D YPD8_0618 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_1939 fliN; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D YPD8_0622 fliF; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPD8_0637 flgI; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YPD8_1954 flgI; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YPD8_0628 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPD8_1962 flgA; flagellar basal body P-ring biosynthesis protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPD8_0636 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YPD8_1955 flgH; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YPD8_1937 flagellar protein FliL K02415 fliL; flagellar protein FliL
D YPD8_0650 putative flagellar biogenesis protein K02415 fliL; flagellar protein FliL
D YPD8_0621 fliE; putative flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D YPD8_1928 fliE; flagellar basal body protein K02408 fliE; flagellar hook-basal body complex protein FliE
D YPD8_0649 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YPD8_1935 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D YPD8_0629 flgB; flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D YPD8_1961 flgB; flagellar basal body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D YPD8_1960 flgC; flagellar basal body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D YPD8_0630 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPD8_1959 flgD; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPD8_0634 hypothetical protein K02391 flgF; flagellar basal-body rod protein FlgF
D YPD8_1957 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YPD8_0635 flgG; putative flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D YPD8_1956 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YPD8_1953 flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YPD8_0631 flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D YPD8_1958 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D YPD8_0638 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D YPD8_1952 flgK; flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D YPD8_0639 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPD8_1951 flgL; flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPD8_0627 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D YPD8_1964 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YPD8_2469 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D YPD8_2468 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D YPD8_0643 flaA1; putative flagellin K02406 fliC; flagellin
D YPD8_0644 flaA2; putative flagellin K02406 fliC; flagellin
D YPD8_0645 flaA3; putative flagellin K02406 fliC; flagellin
D YPD8_1920 fliC; flagellin K02406 fliC; flagellin
D YPD8_0646 fliD; putative flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D YPD8_1921 fliD; flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D YPD8_0647 fliS; putative flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D YPD8_1922 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YPD8_1923 fliT; FliT K02423 fliT; flagellar protein FliT
D YPD8_2074 flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPD8_0651 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D YPD8_1919 fliA; flagellar biosynthesis sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D YPD8_0652 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_2073 motA; flagellar motor protein K02556 motA; chemotaxis protein MotA
D YPD8_0653 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D YPD8_2072 motB; flagellar motor protein K02557 motB; chemotaxis protein MotB
D YPD8_0620 sigma-54 transcriptional regulatory protein K10943 flrC; two-component system, response regulator FlrC
D YPD8_1916 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPD8_1918 fliZ; putative alternative sigma factor regulatory protein K02425 fliZ; regulator of sigma S factor FliZ
D YPD8_1963 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YPD8_0739 hypothetical protein K02669 pilT; twitching motility protein PilT
D YPD8_2427 putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D YPD8_0605 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YPD8_0604 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D YPD8_0603 hypothetical protein K02280 cpaC; pilus assembly protein CpaC
D YPD8_0601 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YPD8_0600 putative type II secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YPD8_3421 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2032 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2035 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2574 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_1858 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPD8_2031 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_2045 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPD8_3422 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPD8_1860 fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPD8_0991 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPD8_3424 outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2033 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2046 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPD8_2572 hypothetical protein K07347 fimD; outer membrane usher protein
D YPD8_pMT0060 caf1A; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPD8_2044 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_2047 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPD8_2043 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ypx04812]
D YPD8_3188 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YPD8_0492 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YPD8_0491 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YPD8_1713 minC; septum formation inhibitor K03610 minC; septum site-determining protein MinC
D YPD8_1714 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D YPD8_pCD0006 plasmid partitioning transcription repressor K03496 parA; chromosome partitioning protein
D YPD8_pCD0005 plasmid partition protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_pMT0074 parB; partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPD8_pMT0080 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ypx04147]
D YPD8_2727 htpG; heat shock protein 90 K04079 HSP90A; molecular chaperone HtpG
D YPD8_2958 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPD8_1652 glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YPD8_0755 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YPD8_1726 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_1488 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPD8_0154 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YPD8_2792 alkyl hydroperoxide reductase subunit c K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D YPD8_0306 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPD8_0408 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D YPD8_2436 guaB; inositol-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YPD8_3305 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D YPD8_0184 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D YPD8_2119 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YPD8_1377 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YPD8_0471 AMP binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_1716 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPD8_2726 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YPD8_3543 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPD8_2731 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPD8_3459 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YPD8_1548 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YPD8_1086 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPD8_3093 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPD8_1138 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YPD8_3472 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YPD8_0086 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YPD8_2899 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YPD8_0025 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPD8_3321 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YPD8_1404 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPD8_0762 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_1007 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPD8_3282 PurH protein: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPD8_3281 PurH protein: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPD8_3453 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_3001 dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPD8_1724 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YPD8_0081 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YPD8_1141 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ypx02048]
D YPD8_2228 hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D YPD8_2229 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D YPD8_2231 hypothetical protein K19127 csy1; CRISPR-associated protein Csy1
D YPD8_2232 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D YPD8_2233 hypothetical protein K19129 csy3; CRISPR-associated protein Csy3
D YPD8_2234 hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D YPD8_1706 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPD8_0141 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPD8_pMT0076 putative DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D YPD8_0338 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D YPD8_0339 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D YPD8_2599 hypothetical protein K18843 hicB; antitoxin HicB
D YPD8_2739 hypothetical protein K19162 tomB; hha toxicity modulator TomB
D YPD8_1451 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YPD8_pCD0004 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D YPD8_0790 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D YPD8_3029 hypothetical protein K19334 tabA; biofilm protein TabA
D YPD8_2165 hypothetical protein K19334 tabA; biofilm protein TabA
D YPD8_0492 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YPD8_3188 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YPD8_0582 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YPD8_0579 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YPD8_2609 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPD8_0778 hypothetical protein K19168 cptA; toxin CptA
D YPD8_2414 aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPD8_1668 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:ypx04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ypx04090]
C 01504 Antimicrobial resistance genes [BR:ypx01504]
D YPD8_3569 mdfA; multidrug translocase MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YPD8_1784 two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPD8_1783 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YPD8_2098 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2099 sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPD8_2097 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPD8_3063 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_2736 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPD8_3062 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_2737 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPD8_0693 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPD8_3061 outer membrane protein, efflux pump K18139 oprM; outer membrane protein, multidrug efflux system
D YPD8_2699 cueR; putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YPD8_0574 ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPD8_0894 putative outer membrane porin C protein K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:ypx00536]
D YPD8_0528 putative adhesin K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ypx00537]
D YPD8_1404 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:ypx03200]
D YPD8_1702 rzpR; putative prophage endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ypx03100]
D YPD8_t45 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t46 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t70 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t47 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t62 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D YPD8_t40 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t50 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t51 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t49 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t67 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t39 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D YPD8_t23 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YPD8_t32 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YPD8_t27 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D YPD8_t18 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YPD8_t69 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YPD8_t19 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D YPD8_t29 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D YPD8_t35 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YPD8_t36 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YPD8_t33 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D YPD8_t17 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YPD8_t57 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D YPD8_t59 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t9 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t30 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D YPD8_t66 tRNA-His K14226 tRNA-His; tRNA His
D YPD8_t1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t71 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t63 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t48 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D YPD8_t37 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t65 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t55 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t53 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D YPD8_t13 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t14 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t41 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t31 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D YPD8_t34 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t38 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t15 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t16 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t54 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t7 tRNA-Met K14230 tRNA-Met; tRNA Met
D YPD8_t3 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YPD8_t8 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D YPD8_t10 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YPD8_t64 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YPD8_t72 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D YPD8_t12 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t20 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t52 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t26 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D YPD8_t56 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t58 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t11 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t61 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D YPD8_t68 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D YPD8_t24 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YPD8_t60 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D YPD8_t42 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t44 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t43 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t22 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t21 tRNA-Val K14237 tRNA-Val; tRNA Val
D YPD8_t73 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D YPD8_r1 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r4 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r13 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r19 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r16 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r9 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D YPD8_r5 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r12 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r2 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r18 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r8 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r15 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D YPD8_r11 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r3 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r7 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r14 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r17 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r6 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D YPD8_r10 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D YPD8_2167 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D YPD8_0587 putative aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YPD8_2488 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YPD8_1242 putative aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D YPD8_1356 hypothetical protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D YPD8_1561 oxidoreductase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D YPD8_2606 putative ion channel protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D YPD8_2199 gutB; putative zinc-binding dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D YPD8_2935 Zinc-binding dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D YPD8_0271 putative oxidoreductase K26080 E1.1.3.29; N-acylhexosamine oxidase [EC:1.1.3.29]
D YPD8_2235 putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D YPD8_0519 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D YPD8_2245 solA; putative sarcosine oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D YPD8_0280 qor; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YPD8_2080 probable Zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YPD8_0581 mdaB; putative modulator of drug activity K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D YPD8_1424 acpD; acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D YPD8_3098 msrA; methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D YPD8_1651 methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D YPD8_3209 putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D YPD8_3114 transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D YPD8_3191 hypothetical protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D YPD8_2927 putative cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D YPD8_2680 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YPD8_1442 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YPD8_2645 hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D YPD8_3482 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YPD8_1659 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YPD8_2403 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D YPD8_2208 putative dioxygenase alpha subunit K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D YPD8_2209 oxidoreductase FAD/NAD binding/2Fe-2S iron-sulfur cluster binding domain protein K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D YPD8_1587 alcA; putative siderophore biosynthetic enzyme K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D YPD8_1975 ftnA; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D YPD8_2993 hypothetical protein K14588 cueO; cuproxidase [EC:1.16.3.4]
D YPD8_0084 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D YPD8_2684 putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D YPD8_3037 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D YPD8_0921 pflA; pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D YPD8_0941 hcr; putative oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D YPD8_2940 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D YPD8_1485 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D YPD8_2192 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D YPD8_1832 putative tellurite resistance protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D YPD8_0254 coproporphyrinogen III oxidase K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D YPD8_2288 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YPD8_3057 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D YPD8_3593 putative acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D YPD8_3026 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D YPD8_3418 hypothetical protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D YPD8_0931 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D YPD8_0534 hypothetical protein K21298 E2.4.1.333; 1,2-beta-oligoglucan phosphorylase [EC:2.4.1.333]
D YPD8_2223 hypothetical protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D YPD8_2858 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D YPD8_0876 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D YPD8_2822 putative thiamine biosynthesis lipoprotein apbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D YPD8_1051 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D YPD8_1503 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D YPD8_0567 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D YPD8_1506 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D YPD8_3277 isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D YPD8_1330 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D YPD8_2536 sixA; putative phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D YPD8_1017 rtn1; hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YPD8_3522 hypothetical protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YPD8_2664 sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YPD8_0824 putative sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YPD8_0837 putative sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YPD8_0746 endA; endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D YPD8_0374 metalloenzyme K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YPD8_3325 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YPD8_2123 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YPD8_2307 hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-]
D YPD8_2815 hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D YPD8_3523 Cellulase K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D YPD8_1703 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D YPD8_0812 putative galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D YPD8_2056 probable N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPD8_0213 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D YPD8_1545 hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D YPD8_2345 hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D YPD8_1979 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D YPD8_3155 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D YPD8_0566 hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D YPD8_2749 putative haloacid dehalogenase-like hydrolase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D YPD8_2654 hypothetical protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D YPD8_2135 maf; Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D YPD8_0005 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YPD8_1050 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D YPD8_1351 putative fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D YPD8_0321 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D YPD8_0842 hypothetical protein K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
D YPD8_1195 csdA; cysteine sulfinate desulfinase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D YPD8_1903 hypothetical protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D YPD8_0287 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D YPD8_1048 hypothetical protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D YPD8_3092 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D YPD8_1360 integral membrane protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D YPD8_1362 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D YPD8_1363 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D YPD8_2828 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D YPD8_2827 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D YPD8_2826 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D YPD8_2825 nqrD; NADH-ubiquinone oxidoreductase K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D YPD8_2824 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D YPD8_1846 putative Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D YPD8_2823 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D YPD8_3367 putative P-type cation-translocating membrane ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D YPD8_2075 mgtB; Mg(2+) transport ATPase protein B K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D YPD8_2978 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D YPD8_3580 formate dehydrogenase K02379 fdhD; FdhD protein
D YPD8_2418 fdx; adrenodoxin family ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D YPD8_1359 electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D YPD8_1358 membrane protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D YPD8_1364 Na(+)-translocating NADH-quinone reductase subunit E K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D YPD8_0299 hydN; 4Fe-4S ferrodoxin K05796 hydN; electron transport protein HydN
D YPD8_0001 flavodoxin K06205 mioC; MioC protein
D YPD8_0782 fldB; flavodoxin K03840 fldB; flavodoxin II
D YPD8_2415 nifU; NifU family protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D YPD8_3161 putative cytochrome K15536 cybC; soluble cytochrome b562
D YPD8_2908 cybC; cytochrome b(562) K15536 cybC; soluble cytochrome b562
D YPD8_2658 ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D YPD8_2306 fldA; flavodoxin K03839 fldA; flavodoxin I
D YPD8_2655 napC; cytochrome C-type protein NapC K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
D YPD8_0335 aidB; putative acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D YPD8_2317 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D YPD8_2615 putative sulfate transport protein CysZ K06203 cysZ; CysZ protein
D YPD8_1228 hypothetical protein K08234 yaeR; glyoxylase I family protein
D YPD8_1440 hypothetical protein K14054 mpaA; murein peptide amidase A
D YPD8_0738 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D YPD8_1345 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D YPD8_1346 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D YPD8_0920 hypothetical protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D YPD8_3398 hemY; putative protoheme IX biogenesis protein K02498 hemY; HemY protein
D YPD8_3328 aarF; putative ubiquinone biosynthesis protein UbiB K03688 ubiB; ubiquinone biosynthesis protein
D YPD8_3329 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D YPD8_3058 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D YPD8_0013 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D YPD8_0686 putative integral membrane efflux protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D YPD8_0584 sufI; putative cell division protein K04753 sufI; suppressor of ftsI
C 99999 Others
D YPD8_0500 membrane protein K15977 K15977; putative oxidoreductase
D YPD8_2859 putative acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D YPD8_3290 rsd; regulator of sigma D K07740 rsd; regulator of sigma D
D YPD8_2744 glnK; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D YPD8_0120 hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D YPD8_1430 hslJ; putative heat shock protein K03668 hslJ; heat shock protein HslJ
D YPD8_0934 clpS; ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D YPD8_2758 tig; trigger factor K03545 tig; trigger factor
D YPD8_3192 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D YPD8_3575 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D YPD8_2331 ureE; urease accessory protein K03187 ureE; urease accessory protein
D YPD8_2332 ureF; urease accessory protein K03188 ureF; urease accessory protein
D YPD8_2333 ureG; urease accessory protein K03189 ureG; urease accessory protein
D YPD8_2334 hypothetical protein K03190 ureD; urease accessory protein
D YPD8_1172 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D YPD8_3438 putative magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
D YPD8_0551 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D YPD8_0861 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D YPD8_0160 hypothetical protein K07397 yhfA; putative redox protein
D YPD8_0116 hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
C 99976 Replication and repair
D YPD8_2740 putative 6-O-methylguanine DNA methyltransferase family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D YPD8_1199 xni; exonuclease IX K01146 xni; protein Xni
D YPD8_0049 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D YPD8_3331 alpha helix chain K09760 rmuC; DNA recombination protein RmuC
D YPD8_0938 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D YPD8_3119 hypothetical protein K07460 yraN; putative endonuclease
D YPD8_0214 hypothetical protein K04096 smf; DNA processing protein
D YPD8_0924 rarA; replication/recombination-associated protein RarA K07478 ycaJ; putative ATPase
D YPD8_0216 putative DNA-binding protein K07479 yrdD; putative DNA topoisomerase
D YPD8_0791 putative primase K06919 K06919; putative DNA primase/helicase
D YPD8_1297 insB; insertion sequence protein K07480 insB; insertion element IS1 protein InsB
D YPD8_0697 insertion element DNA-binding protein K07483 K07483; transposase
D YPD8_3070 insertion element DNA-binding protein K07483 K07483; transposase
D YPD8_3464 insertion element DNA-binding protein K07483 K07483; transposase
D YPD8_0656 insertion element DNA-binding protein K07483 K07483; transposase
D YPD8_3255 insertion element DNA-binding protein K07483 K07483; transposase
D YPD8_pCD0008 hypothetical protein K07483 K07483; transposase
D YPD8_pCD0057 hypothetical protein K07483 K07483; transposase
D YPD8_0105 transposase K07483 K07483; transposase
D YPD8_3609 transposase K07483 K07483; transposase
D YPD8_3567 transposase K07483 K07483; transposase
D YPD8_pMT0064 transposase K07486 K07486; transposase
D YPD8_0418 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0426 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0469 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0474 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0607 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1026 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0899 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0932 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1105 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPD8_3015 putative transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3136 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1114 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1203 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3296 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3314 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3399 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1596 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1681 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1895 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2385 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2395 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2438 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2410 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2474 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0088 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0185 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2676 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2686 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPD8_2776 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2785 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0513 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0606 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0633 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0753 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0838 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0839 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0882 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1416 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1445 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1454 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1520 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1757 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2136 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3108 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3206 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2300 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3358 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3493 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_0019 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1059 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1173 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1260 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1489 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2610 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2619 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1966 IS1541, transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2121 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2128 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2868 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2879 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2886 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_2916 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_3000 transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_pMT0034 putative transposase K07491 rayT; REP-associated tyrosine transposase
D YPD8_1316 transposase K07493 K07493; putative transposase
D YPD8_1535 transposase K07493 K07493; putative transposase
D YPD8_1556 transposase K07493 K07493; putative transposase
D YPD8_1621 transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPD8_1641 transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPD8_1670 transposase K07493 K07493; putative transposase
D YPD8_1796 transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPD8_2016 transposase K07493 K07493; putative transposase
D YPD8_2110 transposase K07493 K07493; putative transposase
D YPD8_2139 transposase K07493 K07493; putative transposase
D YPD8_2246 transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPD8_2248 transposase K07493 K07493; putative transposase
D YPD8_2441 transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPD8_2493 transposase K07493 K07493; putative transposase
D YPD8_2502 transposase K07493 K07493; putative transposase
D YPD8_2571 transposase K07493 K07493; putative transposase
D YPD8_pCD0012 transposase K07493 K07493; putative transposase
D YPD8_pMT0063 transposase, IS256 family K07493 K07493; putative transposase
D YPD8_3419 transposase K07493 K07493; putative transposase
D YPD8_3420 transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPD8_0011 transposase K07493 K07493; putative transposase
D YPD8_0012 transposase K07493 K07493; putative transposase
D YPD8_1696 transposase K07493 K07493; putative transposase
D YPD8_1697 transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPD8_1890 hypothetical protein K07493 K07493; putative transposase
D YPD8_0657 IS1661 transposase K07497 K07497; putative transposase
D YPD8_0696 IS1661 transposase K07497 K07497; putative transposase
D YPD8_3069 IS1661 transposase K07497 K07497; putative transposase
D YPD8_3256 IS1661 transposase K07497 K07497; putative transposase
D YPD8_3465 IS1661 transposase K07497 K07497; putative transposase
D YPD8_3568 IS1661 transposase K07497 K07497; putative transposase
D YPD8_3610 IS1661 transposase K07497 K07497; putative transposase
D YPD8_pCD0056 hypothetical protein K07497 K07497; putative transposase
D YPD8_pCD0007 hypothetical protein K07497 K07497; putative transposase
D YPD8_pCD0001 integrase core domain protein K07497 K07497; putative transposase
D YPD8_pCD0065 putative transposase K07497 K07497; putative transposase
D YPD8_0104 IS1661 transposase K07497 K07497; putative transposase
D YPD8_1894 tnpA; putative transposase K07497 K07497; putative transposase
D YPD8_1775 integrase core domain protein K07497 K07497; putative transposase
D YPD8_pCD0051 hypothetical protein K07497 K07497; putative transposase
D YPD8_pCD0049 transposase K07497 K07497; putative transposase
D YPD8_pCD0060 putative transposase K07497 K07497; putative transposase
D YPD8_1709 transposase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D YPD8_1452 pspA; phage shock protein A K03969 pspA; phage shock protein A
D YPD8_2729 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D YPD8_3400 putative permease protein K03293 TC.AAT; amino acid transporter, AAT family
D YPD8_2207 putative BCCT-family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D YPD8_1461 proton dependent peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YPD8_2625 putative permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D YPD8_2800 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D YPD8_1252 permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D YPD8_0375 putative Na+ dependent nucleoside transporter-family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D YPD8_0077 transporter, divalent anion:Na+ symporter (DASS) family K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D YPD8_0969 TrkA, Potassium channel-family protein K07085 K07085; putative transport protein
D YPD8_3600 membrane protein K07085 K07085; putative transport protein
C 99978 Cell growth
D YPD8_1318 ispZ; putative intracellular septation protein K06190 ispZ; intracellular septation protein
D YPD8_3370 putative lipoprotein K27311 dcrB; inner membrane lipoprotein DcrB
D YPD8_3104 hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D YPD8_1662 hypothetical protein K06415 spoVR; stage V sporulation protein R
D YPD8_0061 hypothetical protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D YPD8_2117 lipoprotein K07337 K07337; penicillin-binding protein activator
D YPD8_1263 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D YPD8_2034 fimbrial assembly chaperone protein K15540 ecpD; chaperone protein EcpD
D YPD8_2573 pili chaperone protein K15540 ecpD; chaperone protein EcpD
D YPD8_1202 syd; SecY interacting protein Syd K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D YPD8_3006 ampE; putative membrane-bound sensory transducer in beta-lactamase regulation K03807 ampE; AmpE protein
D YPD8_0263 tellurite resistance protein K05792 terA; tellurite resistance protein TerA
D YPD8_0265 terD; tellurium resistance protein K05795 terD; tellurium resistance protein TerD
D YPD8_0266 terE; tellurium resistance protein K05795 terD; tellurium resistance protein TerD
D YPD8_0262 tellurium resistance protein K05791 terZ; tellurium resistance protein TerZ
D YPD8_2038 putative solute/DNA competence effector K03607 proQ; ProP effector
D YPD8_3495 uspA; universal stress protein A K06149 uspA; universal stress protein A
D YPD8_1407 putative stress protein K14055 uspE; universal stress protein E
D YPD8_3333 carbon starvation protein K06200 cstA; carbon starvation protein
D YPD8_1353 cstA; carbon starvation protein K06200 cstA; carbon starvation protein
D YPD8_0026 bipA; putative GTPase K06207 typA; GTP-binding protein
D YPD8_2291 hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YPD8_1825 putative phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YPD8_1655 hypothetical protein K07180 prkA; serine protein kinase
D YPD8_0565 hypothetical protein K07184 ygiM; SH3 domain protein
D YPD8_0381 smp; hypothetical protein K07186 smp; membrane protein
D YPD8_2769 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D YPD8_0925 lolA; outer-membrane lipoprotein carrier protein precursor K03634 lolA; outer membrane lipoprotein carrier protein
D YPD8_1770 lolB; outer membrane lipoprotein LolB precursor K02494 lolB; outer membrane lipoprotein LolB
D YPD8_2540 vacJ; lipoprotein precursor K04754 mlaA; phospholipid-binding lipoprotein MlaA
D YPD8_3411 putative lipopolysaccharide biosynthesis protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D YPD8_1469 slyB; putative lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D YPD8_3205 outer membrane lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D YPD8_1220 ompH; cationic 19 kDa outer membrane protein precursor K06142 hlpA; outer membrane protein
D YPD8_2939 nlpD; lipoprotein nlpD K06194 nlpD; lipoprotein NlpD
D YPD8_3067 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D YPD8_1322 ompW; hypothetical protein K07275 ompW; outer membrane protein
D YPD8_2878 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D YPD8_1717 outer membrane protein K07285 slp; outer membrane lipoprotein
D YPD8_2760 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D YPD8_1591 hypothetical protein K07289 asmA; AsmA protein
D YPD8_3514 hypothetical protein K07290 yhjG; AsmA family protein
D YPD8_2698 hypothetical protein K07340 ybbJ; inner membrane protein
D YPD8_1616 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D YPD8_2243 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
D YPD8_0781 inner membrane protein CreD K06143 creD; inner membrane protein
D YPD8_2545 ccmE; putative cytochrome c-type biogenesis protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D YPD8_2542 ccmH; putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D YPD8_2428 putative DNA-binding protein K15539 rodZ; cytoskeleton protein RodZ
D YPD8_0520 hypothetical protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D YPD8_3626 phoU; putative phosphate transport system protein K02039 phoU; phosphate transport system protein
D YPD8_0264 terC; tellurium resistance protein K05794 terC; tellurite resistance protein TerC
D YPD8_0302 putative cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D YPD8_1742 cutC; putative copper homeostasis protein K06201 cutC; copper homeostasis protein
D YPD8_3043 phnK; phosphonates transport ATP-binding protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D YPD8_0429 apaG; hypothetical protein K06195 apaG; ApaG protein
D YPD8_3393 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D YPD8_0250 hmuS; hemin transport protein K07225 hmuS; putative hemin transport protein
D YPD8_0253 hypothetical protein K07227 chuX; heme iron utilization protein
D YPD8_2734 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D YPD8_2514 cvpA; putative colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D YPD8_0884 pqiB; paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D YPD8_1748 putative oxidoreductase K03810 mviM; virulence factor
D YPD8_2861 putative lipoprotein K05811 yfiM; putative lipoprotein
D YPD8_0372 osmY; osmotically inducible protein Y K04065 osmY; hyperosmotically inducible periplasmic protein
D YPD8_1753 hypothetical protein K04477 ycdX; putative hydrolase
D YPD8_2365 hypothetical protein K06866 grcA; autonomous glycyl radical cofactor
D YPD8_2968 hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D YPD8_1498 sufA; iron-sulfur cluster assembly scaffold protein K05997 sufA; Fe-S cluster assembly protein SufA
D YPD8_1497 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D YPD8_1495 hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D YPD8_2025 hypothetical protein K07038 K07038; inner membrane protein
D YPD8_2662 hypothetical protein K07038 K07038; inner membrane protein
D YPD8_3511 ribonuclease BN-like family protein K07058 K07058; membrane protein
D YPD8_3512 membrane protein K07058 K07058; membrane protein
D YPD8_0028 rbn; ribonuclease BN K07058 K07058; membrane protein
D YPD8_0305 membrane protein K07113 fxsA; UPF0716 protein FxsA
D YPD8_1194 Fe-S metabolism associated protein K02426 sufE; cysteine desulfuration protein SufE
D YPD8_1493 cysteine desufuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D YPD8_2242 hypothetical protein K07146 K07146; UPF0176 protein
D YPD8_2093 hypothetical protein K07153 hflD; high frequency lysogenization protein
D YPD8_1589 putative ferric iron reductase K13255 fhuF; ferric iron reductase protein FhuF
D YPD8_2551 lemA; hypothetical protein K03744 lemA; LemA protein
D YPD8_0215 smg; hypothetical protein K03747 smg; Smg protein
D YPD8_0397 hypothetical protein K05805 creA; CreA protein
D YPD8_0747 sprT; hypothetical protein K02742 sprT; SprT protein
D YPD8_2515 dedD; hypothetical protein K03749 dedD; DedD protein
D YPD8_0140 hypothetical protein K03112 damX; DamX protein
D YPD8_1605 hypothetical protein K03748 sanA; SanA protein
D YPD8_2518 dedA; hypothetical protein K03975 dedA; membrane-associated protein
D YPD8_0885 pqiA; putative paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D YPD8_2040 hypothetical protein K03808 pqiA; paraquat-inducible protein A
D YPD8_2041 membrane protein K03808 pqiA; paraquat-inducible protein A
D YPD8_1449 hypothetical protein K08990 ycjF; putative membrane protein
D YPD8_2251 hypothetical protein K08996 yagU; putative membrane protein
D YPD8_1639 hypothetical protein K09858 K09858; SEC-C motif domain protein
D YPD8_2741 putative lipoprotein K09914 K09914; putative lipoprotein
D YPD8_3261 maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein
D YPD8_3267 phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE
D YPD8_2553 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D YPD8_0692 enterotoxin-like protein K06867 K06867; uncharacterized protein
D YPD8_2924 hypothetical protein K06867 K06867; uncharacterized protein
D YPD8_2367 yplB; putative phospholipase A accessory protein K06867 K06867; uncharacterized protein
D YPD8_0825 putative regulatory protein K06871 K06871; uncharacterized protein
D YPD8_1618 putative heme-binding protein K06871 K06871; uncharacterized protein
D YPD8_2663 putative sulfatase modifier protein K06871 K06871; uncharacterized protein
D YPD8_2439 hypothetical protein K06887 K06887; uncharacterized protein
D YPD8_2497 hypothetical protein K06887 K06887; uncharacterized protein
D YPD8_1031 hypothetical protein K06887 K06887; uncharacterized protein
D YPD8_1782 hypothetical protein K06889 K06889; uncharacterized protein
D YPD8_3111 hypothetical protein K06889 K06889; uncharacterized protein
D YPD8_1115 hypothetical protein K06890 K06890; uncharacterized protein
D YPD8_1450 hypothetical protein K06918 K06918; uncharacterized protein
D YPD8_pMT0075 putative DNA-binding protein K06921 K06921; uncharacterized protein
D YPD8_1269 hypothetical protein K06929 K06929; uncharacterized protein
D YPD8_2026 transport protein K06956 K06956; uncharacterized protein
D YPD8_0578 hypothetical protein K07000 K07000; uncharacterized protein
D YPD8_2114 hypothetical protein K07000 K07000; uncharacterized protein
D YPD8_1029 hypothetical protein K07014 K07014; uncharacterized protein
D YPD8_0163 hypothetical protein K07019 K07019; uncharacterized protein
D YPD8_0407 hypothetical protein K07034 K07034; uncharacterized protein
D YPD8_2674 hypothetical protein K07054 K07054; uncharacterized protein
D YPD8_2507 hypothetical protein K07071 K07071; uncharacterized protein
D YPD8_2531 membrane protein K07090 K07090; uncharacterized protein
D YPD8_2505 phosphodiesterase K07095 K07095; uncharacterized protein
D YPD8_3101 hypothetical protein K07109 K07109; uncharacterized protein
D YPD8_0243 putative integral membrane protein K07112 K07112; uncharacterized protein
D YPD8_3118 glycosylase K07121 K07121; uncharacterized protein
D YPD8_1795 hypothetical protein K07126 K07126; uncharacterized protein
D YPD8_pMT0025 hypothetical protein K07128 K07128; uncharacterized protein
D YPD8_pMT0027 putative ABC transporter ATP-binding protein K07128 K07128; uncharacterized protein
D YPD8_1739 hypothetical protein K07136 K07136; uncharacterized protein
D YPD8_3125 hypothetical protein K07139 K07139; uncharacterized protein
D YPD8_0888 putative iron-sulfur binding protein K07140 K07140; MOSC domain-containing protein
D YPD8_1609 hypothetical protein K07148 K07148; uncharacterized protein
D YPD8_1710 hypothetical protein K09160 K09160; uncharacterized protein
D YPD8_2145 hypothetical protein K09161 K09161; uncharacterized protein
D YPD8_2652 hypothetical protein K09768 K09768; uncharacterized protein
D YPD8_1656 hypothetical protein K09786 K09786; uncharacterized protein
D YPD8_0060 hypothetical protein K09798 K09798; uncharacterized protein
D YPD8_0059 hypothetical protein K09798 K09798; uncharacterized protein
D YPD8_1557 hypothetical protein K09802 K09802; uncharacterized protein
D YPD8_0759 hypothetical protein K09807 K09807; uncharacterized protein
D YPD8_0937 putative virulence factor K09824 virK; uncharacterized protein
D YPD8_0883 putative lipoprotein protein K09857 K09857; uncharacterized protein
D YPD8_0402 hypothetical protein K09861 K09861; uncharacterized protein
D YPD8_3285 hypothetical protein K09891 K09891; uncharacterized protein
D YPD8_0021 hypothetical protein K09894 K09894; uncharacterized protein
D YPD8_0765 hypothetical protein K09895 K09895; uncharacterized protein
D YPD8_3439 hypothetical protein K09897 K09897; uncharacterized protein
D YPD8_2144 hypothetical protein K09899 K09899; uncharacterized protein
D YPD8_1625 hypothetical protein K09901 K09901; uncharacterized protein
D YPD8_1743 hypothetical protein K09907 K09907; uncharacterized protein
D YPD8_3134 hypothetical protein K09908 K09908; uncharacterized protein
D YPD8_1268 hypothetical protein K09909 K09909; uncharacterized protein
D YPD8_2998 hypothetical protein K09910 K09910; uncharacterized protein
D YPD8_1259 hypothetical protein K09911 K09911; uncharacterized protein
D YPD8_1543 nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D YPD8_1980 hypothetical protein K09918 K09918; uncharacterized protein
D YPD8_0576 hypothetical protein K09920 K09920; uncharacterized protein
D YPD8_3391 hypothetical protein K09921 K09921; uncharacterized protein
D YPD8_0730 hypothetical protein K09923 K09923; uncharacterized protein
D YPD8_2448 hypothetical protein K09946 K09946; uncharacterized protein
D YPD8_2611 hypothetical protein K09962 K09962; uncharacterized protein
D YPD8_2701 hypothetical protein K09973 K09973; uncharacterized protein
D YPD8_1809 hypothetical protein K09975 K09975; uncharacterized protein
D YPD8_1427 hypothetical protein K09978 K09978; uncharacterized protein
D YPD8_3049 hypothetical protein K09979 K09979; uncharacterized protein
D YPD8_pCD0040 yscD; virulence protein K09983 K09983; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 9, 2024