+F Repair protein KO
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DNA Repair and Recombination Proteins - Zea mays (maize)
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 103638286 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 103639442 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 100191679 type II CPD DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 100284406 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 100285435 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 100284112 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 100273912 uncharacterized protein LOC100273912 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 107275233 uncharacterized protein LOC107275233 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 103640763 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 103633096 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 103654581 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 100382167 uncharacterized protein LOC100382167 K02328 POLD2; DNA polymerase delta subunit 2
F 100194011 uncharacterized protein LOC100194011 K03504 POLD3; DNA polymerase delta subunit 3
F 100279971 uncharacterized protein LOC100279971 K03504 POLD3; DNA polymerase delta subunit 3
F 103642327 uncharacterized protein LOC103642327 K03504 POLD3; DNA polymerase delta subunit 3
F 100282638 uncharacterized protein LOC100282638 K03505 POLD4; DNA polymerase delta subunit 4
F 100280534 delta DNA polymerase K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 103627197 DNA polymerase epsilon catalytic subunit A isoform X1 K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 100280690 DNA polymerase epsilon subunit 2 K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 100282897 uncharacterized protein LOC100282897 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 542425 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 542357 proliferating cell nuclear antigen 2 K04802 PCNA; proliferating cell nuclear antigen
E 732817 flap endonuclease 1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 100383660 uncharacterized protein LOC100383660 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 100383890 uncharacterized protein LOC100383890 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 100283527 uncharacterized protein LOC100283527 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 100383136 Tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 103634500 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 541878 diphosphonucleotide phosphatase 2 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 100383279 uncharacterized protein LOC100383279 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 103647201 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 103627237 protein ADP-ribosyltransferase PARP3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 103635146 poly [ADP-ribose] polymerase 2 isoform X2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 103645297 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 100274222 DNA repair protein RAD23 K10839 RAD23; UV excision repair protein RAD23
F 100282762 uncharacterized protein LOC100282762 K10839 RAD23; UV excision repair protein RAD23
F 100282427 uncharacterized protein LOC100282427 K10839 RAD23; UV excision repair protein RAD23
F 100283179 uncharacterized protein LOC100283179 K10839 RAD23; UV excision repair protein RAD23
F 100191313 uncharacterized protein LOC100191313 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 100192928 uncharacterized protein LOC100192928 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103634739 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103649912 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 100501431 uncharacterized protein LOC100501431 K10609 CUL4; cullin 4
F 103625822 cullin-4 K10609 CUL4; cullin 4
F 100279448 uncharacterized protein LOC100279448 K10610 DDB1; DNA damage-binding protein 1
F 103635427 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 100381699 DNA damage-binding protein 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 103643234 uncharacterized protein LOC103643234 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 103653335 uncharacterized protein LOC103653335 K15082 RAD7; DNA repair protein RAD7
F 103633219 DNA repair protein RAD16 isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 541967 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 100277195 uncharacterized protein LOC100277195 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 103626041 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 103628156 LOW QUALITY PROTEIN: uncharacterized protein LOC103628156 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 100282883 uncharacterized protein LOC100282883 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 100282338 DNA-directed RNA polymerase II 16 kDa polypeptide K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 100191330 uncharacterized protein LOC100191330 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 100193880 uncharacterized protein LOC100193880 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 100273250 uncharacterized protein LOC100273250 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 100273995 uncharacterized protein LOC100273995 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 100282532 DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 100283558 uncharacterized protein LOC100283558 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 100283223 DNA-directed RNA polymerase II 19 kDa polypeptide K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 100281008 uncharacterized protein LOC100281008 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 100284267 uncharacterized protein LOC100284267 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 103646824 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 100285329 DNA-directed RNA polymerase II 14.5 kDa polypeptide K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 100286035 uncharacterized protein LOC100286035 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 100281783 DNA-directed RNA polymerase II 8.2 kDa polypeptide K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 113633883 uncharacterized protein LOC113633883 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 100274213 DNA-directed RNA polymerase II subunit J K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 103627413 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 103627418 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 109939580 DNA-directed RNA polymerases II, IV and V subunit 11-like isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 103627422 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 103627414 DNA-directed RNA polymerases II, IV and V subunit 11-like isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 109939981 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 109939982 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 100284471 DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
F 100285004 uncharacterized protein LOC100285004 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 100192928 uncharacterized protein LOC100192928 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103634739 RING-box protein 1-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103649912 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 100501431 uncharacterized protein LOC100501431 K10609 CUL4; cullin 4
F 103625822 cullin-4 K10609 CUL4; cullin 4
F 100279448 uncharacterized protein LOC100279448 K10610 DDB1; DNA damage-binding protein 1
F 103635427 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 100275606 uncharacterized protein LOC100275606 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 103649923 DNA excision repair protein CSB K10841 ERCC6; DNA excision repair protein ERCC-6
F 100278704 uncharacterized protein LOC100278704 K23720 UVSSA; UV-stimulated scaffold protein A
F 103638032 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 103638030 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 103652238 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 103651319 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 100285960 DNA repair helicase UVH6 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 100193949 uncharacterized protein LOC100193949 isoform 1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 100274342 uncharacterized protein LOC100274342 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 100192494 uncharacterized protein LOC100192494 isoform 1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 103645755 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 100281631 REX1 DNA Repair family protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 100273893 uncharacterized protein LOC100273893 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 100272776 uncharacterized protein LOC100272776 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 100283483 uncharacterized protein LOC100283483 K06634 CCNH; cyclin H
E 100284506 CDK-activating kinase assembly factor MAT1 family protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 103638012 RNA polymerase II transcription factor B subunit 3 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 100285427 uncharacterized protein LOC100285427 K07466 RFA1; replication factor A1
E 100383373 uncharacterized protein LOC100383373 K07466 RFA1; replication factor A1
E 100280726 uncharacterized protein LOC100280726 K07466 RFA1; replication factor A1
E 100273584 Replication protein A DNA-binding subunit K07466 RFA1; replication factor A1
E 100285013 OB-fold nucleic acid binding domain containing protein K10739 RFA2; replication factor A2
E 100285903 OB-fold nucleic acid binding domain containing protein K10739 RFA2; replication factor A2
E 100272286 uncharacterized protein LOC100272286 K10739 RFA2; replication factor A2
E 103627452 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 100283481 uncharacterized protein LOC100283481 K10740 RPA3; replication factor A3
E 100126965 uncharacterized protein LOC100126965 K10740 RPA3; replication factor A3
E 100285910 uncharacterized protein LOC100285910 K10740 RPA3; replication factor A3
D Other NER factors
E 100192592 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 100192883 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 103632168 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 100383890 uncharacterized protein LOC100383890 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 100217039 uncharacterized protein LOC100217039 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 100384196 uncharacterized protein LOC100384196 K03869 CUL3; cullin 3
E 103627724 cullin-3A K03869 CUL3; cullin 3
E 103641219 cullin-3A isoform X1 K03869 CUL3; cullin 3
E 100282398 uncharacterized protein LOC100282398 K03872 ELOC; elongin-C
E 100283809 uncharacterized protein LOC100283809 K03872 ELOC; elongin-C
E 100276576 uncharacterized protein LOC100276576 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 100279876 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 103642206 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 542006 DNA mismatch repair protein MSH7 isoform X1 K08737 MSH6; DNA mismatch repair protein MSH6
E 542626 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 103636271 DNA mismatch repair protein MLH1 isoform X1 K08734 MLH1; DNA mismatch repair protein MLH1
E 103653697 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 103647640 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
E 109944383 uncharacterized protein LOC109944383 K08739 MLH3; DNA mismatch repair protein MLH3
E 109944384 uncharacterized protein LOC109944384 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 103654581 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 100382167 uncharacterized protein LOC100382167 K02328 POLD2; DNA polymerase delta subunit 2
E 100194011 uncharacterized protein LOC100194011 K03504 POLD3; DNA polymerase delta subunit 3
E 100279971 uncharacterized protein LOC100279971 K03504 POLD3; DNA polymerase delta subunit 3
E 103642327 uncharacterized protein LOC103642327 K03504 POLD3; DNA polymerase delta subunit 3
E 100282638 uncharacterized protein LOC100282638 K03505 POLD4; DNA polymerase delta subunit 4
E 100280534 delta DNA polymerase K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 100285427 uncharacterized protein LOC100285427 K07466 RFA1; replication factor A1
E 100383373 uncharacterized protein LOC100383373 K07466 RFA1; replication factor A1
E 100280726 uncharacterized protein LOC100280726 K07466 RFA1; replication factor A1
E 100273584 Replication protein A DNA-binding subunit K07466 RFA1; replication factor A1
E 100285013 OB-fold nucleic acid binding domain containing protein K10739 RFA2; replication factor A2
E 100285903 OB-fold nucleic acid binding domain containing protein K10739 RFA2; replication factor A2
E 100272286 uncharacterized protein LOC100272286 K10739 RFA2; replication factor A2
E 103627452 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 100283481 uncharacterized protein LOC100283481 K10740 RPA3; replication factor A3
E 100126965 uncharacterized protein LOC100126965 K10740 RPA3; replication factor A3
E 100285910 uncharacterized protein LOC100285910 K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 103648088 replication factor C subunit 1 K10754 RFC1; replication factor C subunit 1
E 100282197 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 100282678 uncharacterized protein LOC100282678 K10755 RFC2_4; replication factor C subunit 2/4
E 100216703 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 100193357 uncharacterized protein LOC100193357 K10756 RFC3_5; replication factor C subunit 3/5
E 103625817 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
E 103637697 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 542425 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 542357 proliferating cell nuclear antigen 2 K04802 PCNA; proliferating cell nuclear antigen
E 100381439 uncharacterized protein LOC100381439 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 100383890 uncharacterized protein LOC100383890 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 100278060 uncharacterized protein LOC100278060 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 100125648 Mre11B protein K10865 MRE11; double-strand break repair protein MRE11
E 100285133 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 103653563 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA1-core complex
E 103630583 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
E 100273997 uncharacterized protein LOC100273997 K10683 BARD1; BRCA1-associated RING domain protein 1
E 100281664 ATBRCA1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 100193132 uncharacterized protein LOC100193132 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 100282640 protein BRE K12173 BRE; BRCA1-A complex subunit BRE
E 100283593 mov34/MPN/PAD-1 family protein K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 103633141 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 103646962 DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 103634545 BRCT domain-containing protein At4g02110 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 100216554 uncharacterized protein LOC100216554 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 100125648 Mre11B protein K10865 MRE11; double-strand break repair protein MRE11
E 100285133 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 103653563 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D BRCA complex
E 103641455 protein BREAST CANCER SUSCEPTIBILITY 2 homolog A isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 541709 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 541710 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 541709 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 541710 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 100193464 uncharacterized protein LOC100193464 K10869 RAD51L1; RAD51-like protein 1
E 100284087 DNA repair protein RAD51 K10870 RAD51L2; RAD51-like protein 2
E 100282783 uncharacterized protein LOC100282783 K10871 RAD51L3; RAD51-like protein 3
E 100383265 uncharacterized protein LOC100383265 K10879 XRCC2; DNA-repair protein XRCC2
E 103627300 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 100283480 snRK1-interacting protein 1 K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 100283612 uncharacterized protein LOC100283612 K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 100285521 snRK1-interacting protein 1 K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
E 100281219 uncharacterized protein LOC100281219 K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 103627774 DNA repair and recombination protein RAD54 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 103641317 protein CHROMATIN REMODELING 35 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 103630322 SNF2 domain-containing protein CLASSY 4 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 103633601 SNF2 domain-containing protein CLASSY 1 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 103653855 SNF2 domain-containing protein CLASSY 3 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 100277391 protein CHROMATIN REMODELING 35 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 100382802 uncharacterized protein LOC100382802 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 103652713 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 100382628 uncharacterized protein LOC100382628 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 100280239 ATP-dependent DNA helicase Q-like K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100274706 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 103641779 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 100280239 ATP-dependent DNA helicase Q-like K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100274706 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100383032 DNA topoisomerase 3-beta isoform X3 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100273582 uncharacterized protein LOC100273582 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100274087 uncharacterized protein LOC100274087 K10990 RMI1; RecQ-mediated genome instability protein 1
E 100382562 uncharacterized protein LOC100382562 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 100285427 uncharacterized protein LOC100285427 K07466 RFA1; replication factor A1
E 100383373 uncharacterized protein LOC100383373 K07466 RFA1; replication factor A1
E 100280726 uncharacterized protein LOC100280726 K07466 RFA1; replication factor A1
E 100273584 Replication protein A DNA-binding subunit K07466 RFA1; replication factor A1
E 100285013 OB-fold nucleic acid binding domain containing protein K10739 RFA2; replication factor A2
E 100285903 OB-fold nucleic acid binding domain containing protein K10739 RFA2; replication factor A2
E 100272286 uncharacterized protein LOC100272286 K10739 RFA2; replication factor A2
E 103627452 replication protein A 32 kDa subunit B isoform X1 K10739 RFA2; replication factor A2
E 100283481 uncharacterized protein LOC100283481 K10740 RPA3; replication factor A3
E 100126965 uncharacterized protein LOC100126965 K10740 RPA3; replication factor A3
E 100285910 uncharacterized protein LOC100285910 K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 100384804 uncharacterized protein LOC100384804 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 100216692 uncharacterized protein LOC100216692 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 100502168 uncharacterized protein LOC100502168 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 103630057 serine/threonine-protein phosphatase 4 regulatory subunit 3 isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 103650148 serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 103627911 AP-5 complex subunit beta-1 K19022 AP5B1; AP-5 complex subunit beta-1
E 100281080 adaptor complexes medium subunit family protein K19023 AP5M1; AP-5 complex subunit mu-1
E 100279312 uncharacterized protein LOC100279312 isoform 1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 100381612 uncharacterized protein LOC100381612 K22803 SMC5; structural maintenance of chromosomes protein 5
E 100383441 uncharacterized protein LOC100383441 K22804 SMC6; structural maintenance of chromosomes protein 6
E 100274498 uncharacterized protein LOC100274498 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 100192832 uncharacterized protein LOC100192832 isoform 2 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 100381918 Non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 103632802 non-structural maintenance of chromosomes element 4 homolog A isoform X1 K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 100276605 uncharacterized protein LOC100276605 K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 100193130 uncharacterized protein LOC100193130 K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 103645850 crossover junction endonuclease EME1 K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 100216934 crossover junction endonuclease MUS81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 103650756 crossover junction endonuclease MUS81 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 100280804 deleted in split hand/splt foot protein 1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 100285717 uncharacterized protein LOC100285717 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 100193415 uncharacterized protein LOC100193415 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 100284153 holiday junction resolvase, S1x1p, URI domain nuclease isoform 1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 100383402 uncharacterized protein LOC100383402 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 100282987 XPG I-region family protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 103647601 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 103644246 uncharacterized protein LOC103644246 isoform X1 K19026 SPG11; spatacsin
E 103652610 uncharacterized protein LOC103652610 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 100282973 uncharacterized protein LOC100282973 K11339 MORF4L1; mortality factor 4-like protein 1
E 103649905 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 103634732 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 100193153 uncharacterized protein LOC100193153 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 100277790 uncharacterized protein LOC100277790 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 100383072 DNA-dependent metalloprotease WSS1 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 100170235 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 100286229 uncharacterized protein LOC100286229 K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 100381505 uncharacterized protein LOC100381505 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 100281554 uncharacterized protein LOC100281554 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 100125648 Mre11B protein K10865 MRE11; double-strand break repair protein MRE11
E 100285133 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 103653563 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 103645969 putative DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 100274394 uncharacterized protein LOC100274394 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 100383279 uncharacterized protein LOC100383279 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 103634500 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 100502258 uncharacterized protein LOC100502258 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 100191228 Endonuclease/Exonuclease/phosphatase family K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
E 100192745 ubiquitin ligase protein FANCL K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 103654570 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 100277645 uncharacterized protein LOC100277645 K11511 APITD1; centromere protein S
E 103646301 centromere protein X K15360 STRA13; centromere protein X
E 100286132 uncharacterized protein LOC100286132 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 100280239 ATP-dependent DNA helicase Q-like K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100274706 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 100383032 DNA topoisomerase 3-beta isoform X3 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100273582 uncharacterized protein LOC100273582 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 100274087 uncharacterized protein LOC100274087 K10990 RMI1; RecQ-mediated genome instability protein 1
E 100382562 uncharacterized protein LOC100382562 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 103648272 Fanconi anemia group D2 protein homolog isoform X1 K10891 FANCD2; fanconi anemia group D2 protein
E 103634632 Fanconi anemia group I protein homolog isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 103641455 protein BREAST CANCER SUSCEPTIBILITY 2 homolog A isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 103633141 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 100381803 uncharacterized protein LOC100381803 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 541709 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 541710 DNA repair protein RAD51 homolog B K04482 RAD51; DNA repair protein RAD51
E 100284087 DNA repair protein RAD51 K10870 RAD51L2; RAD51-like protein 2
E 100192364 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 103640814 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
E 103650664 WD repeat-containing protein 48 isoform X1 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 100274310 uncharacterized protein LOC100274310 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 100382798 uncharacterized protein LOC100382798 K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 100383205 uncharacterized protein LOC100383205 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 100384768 uncharacterized protein LOC100384768 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 100216566 uncharacterized protein LOC100216566 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 100217253 uncharacterized protein LOC100217253 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 103652598 uncharacterized protein LOC103652598 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 100194389 uncharacterized protein LOC100194389 K23314 WRAP53; telomerase Cajal body protein 1
E 100280725 nucleotide binding protein K24752 WDR70; WD repeat-containing protein 70
E 100278060 uncharacterized protein LOC100278060 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 103648396 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 103640146 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 103651191 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 103655706 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 103645937 DNA polymerase eta K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 118473015 DNA polymerase eta-like K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 118474387 DNA polymerase eta-like K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 100381652 uncharacterized protein LOC100381652 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 103626355 uncharacterized protein LOC100216631 isoform 1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 103633541 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 100193988 uncharacterized protein LOC100193988 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100280476 ubiquitin-conjugating enzyme E2-17 kDa K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100283749 uncharacterized protein LOC100283749 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100284762 uncharacterized protein LOC100284762 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100192052 uncharacterized protein LOC100192052 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 100383801 uncharacterized protein LOC100383801 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 103653576 DNA repair protein RAD5A isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 118471938 DNA repair protein RAD5A-like isoform X1 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 103633493 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 100192908 uncharacterized protein LOC100192908 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 100282170 uncharacterized protein LOC100282170 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 100382057 uncharacterized protein LOC100382057 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103654688 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 100279740 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 100272559 putative ubiquitin-conjugating enzyme family K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 100281972 ubiquitin-conjugating enzyme E2 N K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 103651370 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 101202705 putative ubiquitin-conjugating enzyme family K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 542425 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 542357 proliferating cell nuclear antigen 2 K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 100283409 auxin response factor 75 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 100282451 hus1-like protein K10903 HUS1; HUS1 checkpoint protein
D 100283074 rad1-like protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 100280210 uncharacterized protein LOC100280210 K06662 HRAD17; cell cycle checkpoint protein
D 100282197 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 100282678 uncharacterized protein LOC100282678 K10755 RFC2_4; replication factor C subunit 2/4
D 100216703 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 100193357 uncharacterized protein LOC100193357 K10756 RFC3_5; replication factor C subunit 3/5
D 103625817 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 103637697 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 100283074 rad1-like protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 100273829 uncharacterized protein LOC100273829 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 100192665 nucleic acid binding protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 100192364 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 100273882 uncharacterized protein LOC100273882 K20403 TTI1; TELO2-interacting protein 1
D 103626365 uncharacterized protein At2g39910 isoform X1 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 100276450 uncharacterized protein LOC100276450 K23387 GET4; golgi to ER traffic protein 4
D 100191361 uncharacterized protein LOC100191361 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 103626462 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 103651852 serine/threonine-protein kinase ATM isoform X1 K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 103643291 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 542291 14-3-3-like protein GF14-6 K06630 YWHAE; 14-3-3 protein epsilon
D 100283215 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 100193401 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103629503 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 103631640 14-3-3-like protein GF14-D K06630 YWHAE; 14-3-3 protein epsilon
D 103640474 14-3-3-like protein GF14-D K06630 YWHAE; 14-3-3 protein epsilon
D 103633695 14-3-3-like protein GF14-D K06630 YWHAE; 14-3-3 protein epsilon
D 103644240 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 100285226 uncharacterized protein LOC100285226 K06630 YWHAE; 14-3-3 protein epsilon
D 100273134 uncharacterized protein LOC100273134 K06630 YWHAE; 14-3-3 protein epsilon
D 100279512 14-3-3-like protein GF14-12 K06630 YWHAE; 14-3-3 protein epsilon
D 542194 uncharacterized protein LOC542194 K06630 YWHAE; 14-3-3 protein epsilon
D 100283140 uncharacterized protein LOC100283140 K06630 YWHAE; 14-3-3 protein epsilon
D 103649501 14-3-3-like protein GF14-D K06630 YWHAE; 14-3-3 protein epsilon
D 103649247 14-3-3-like protein GF14-A K06630 YWHAE; 14-3-3 protein epsilon
D 103630574 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 103651716 14-3-3-like protein GF14-A K06630 YWHAE; 14-3-3 protein epsilon
D 103644495 uncharacterized protein LOC103644495 K06630 YWHAE; 14-3-3 protein epsilon
D 109940164 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 109939390 14-3-3-like protein GF14-D K06630 YWHAE; 14-3-3 protein epsilon
D 541768 uncharacterized protein LOC541768 K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 100381693 Serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103632002 serine/threonine-protein kinase Nek3 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103626047 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103640577 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103650480 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100285649 serine/threonine-protein kinase Nek4 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103630397 serine/threonine-protein kinase Nek4 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 100274059 uncharacterized protein LOC100274059 K22422 DONSON; protein downstream neighbor of Son
D 100283774 vacuolar sorting protein 4b K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 103634814 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 100191811 uncharacterized protein LOC100191811 K25059 SDE2; replication stress response regulator SDE2
D 100194279 uncharacterized protein LOC100194279 K25059 SDE2; replication stress response regulator SDE2
D 100281713 uncharacterized protein LOC100281713 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 103640932 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 103626594 uncharacterized protein LOC103626594 K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 100273296 uncharacterized protein LOC100273296 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 100192920 uncharacterized protein LOC100192920 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 103647460 uncharacterized protein LOC103647460 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 103650919 protein artemis K15340 DCLRE1A; DNA cross-link repair 1A protein
D 103630466 LOW QUALITY PROTEIN: uncharacterized protein LOC103630466 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 100279337 uncharacterized protein LOC100279337 K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 100501033 uncharacterized protein LOC100501033 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 100277497 uncharacterized protein LOC100277497 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 100282147 nuclease PA3 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 100272515 uncharacterized protein LOC100272515 precursor K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 100170237 uncharacterized protein LOC100170237 precursor K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 100282067 uncharacterized protein LOC100282067 precursor K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 100502292 uncharacterized protein LOC100502292 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 100191855 uncharacterized protein LOC100191855 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 100284255 pre-mRNA-splicing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 541962 myb2 K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 100284614 BCAS2 protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 100282926 uncharacterized protein LOC100282926 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 110017794 uncharacterized protein LOC110017794 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 100502278 uncharacterized protein LOC100502278 K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 100192012 uncharacterized protein LOC100192012 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 100284475 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 100193273 Ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 100191679 type II CPD DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 100284406 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 100194229 uncharacterized protein LOC100194229 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 100274123 uncharacterized protein LOC100274123 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 100285587 DNA-3-methyladenine glycosylase 1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 100285435 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 100284112 A/G-specific adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 100273848 uncharacterized protein LOC100273848 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100216672 uncharacterized protein LOC100216672 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100191724 uncharacterized protein LOC100191724 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100284031 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103632764 LOW QUALITY PROTEIN: probable GMP synthase [glutamine-hydrolyzing] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103641812 probable GMP synthase [glutamine-hydrolyzing] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100282754 uncharacterized protein LOC100282754 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103649150 uncharacterized protein LOC103649150 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 100273102 uncharacterized protein LOC100273102 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 107275233 uncharacterized protein LOC107275233 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 103640763 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 100191243 uncharacterized protein LOC100191243 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
E 100280514 uncharacterized protein LOC100280514 isoform 1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 103642101 DNA polymerase I A, chloroplastic K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 103641202 DNA polymerase I A, chloroplastic isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 103642101 DNA polymerase I A, chloroplastic K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 103641202 DNA polymerase I A, chloroplastic isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 845225 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 845226 rpoC1; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 845227 rpoC2; RNA polymerase beta'' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 109943315 DNA-directed RNA polymerase subunit beta'-like K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118473518 DNA-directed RNA polymerase subunit beta''-like K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118473634 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118473788 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118473918 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118473920 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118474818 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118475062 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118475748 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118475928 DNA-directed RNA polymerase subunit beta'' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 118475931 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 845224 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
F 118472117 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 103645753 LOW QUALITY PROTEIN: endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 100285474 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 100191367 uncharacterized protein LOC100191367 K03553 recA; recombination protein RecA
E 100384162 putative recA DNA recombination family protein K03553 recA; recombination protein RecA
E 100282426 protein recA K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 100191367 uncharacterized protein LOC100191367 K03553 recA; recombination protein RecA
E 100384162 putative recA DNA recombination family protein K03553 recA; recombination protein RecA
E 100282426 protein recA K03553 recA; recombination protein RecA
E 100384790 uncharacterized protein LOC100384790 K04485 radA; DNA repair protein RadA/Sms
E 103627634 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 103625778 probable DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 100382343 uncharacterized protein LOC100382343 K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 103633568 uncharacterized protein 103633568 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 100191367 uncharacterized protein LOC100191367 K03553 recA; recombination protein RecA
D 100384162 putative recA DNA recombination family protein K03553 recA; recombination protein RecA
D 100282426 protein recA K03553 recA; recombination protein RecA
D 100285474 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024