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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ack03030]
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03410 Base excision repair [PATH:ack03410]
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 C380_15385 endonuclease III
C380_22055 uracil-DNA glycosylase
C380_04905 A/G-specific adenine glycosylase
C380_04895 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
C380_16465 HhH-GPD family protein
C380_11670 Ada metal-binding domain-containing protein
C380_02525 DNA-3-methyladenine glycosylase I
C380_22565 uracil-DNA glycosylase superfamily protein
C380_01595 exodeoxyribonuclease III Xth
C380_08520 exodeoxyribonuclease III Xth
C380_06880 DNA polymerase I
C380_06455 single-stranded-DNA-specific exonuclease RecJ
C380_12335 DNA ligase
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:ack03420]
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03430 Mismatch repair [PATH:ack03430]
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03440 Homologous recombination [PATH:ack03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ack03000]
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03021 Transcription machinery [BR:ack03021]
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03019 Messenger RNA biogenesis [BR:ack03019]
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03041 Spliceosome
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03011 Ribosome [BR:ack03011]
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03009 Ribosome biogenesis [BR:ack03009]
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03016 Transfer RNA biogenesis [BR:ack03016]
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03012 Translation factors [BR:ack03012]
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03110 Chaperones and folding catalysts [BR:ack03110]
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04131 Membrane trafficking [BR:ack04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:ack03051]
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03032 DNA replication proteins [BR:ack03032]
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03036 Chromosome and associated proteins [BR:ack03036]
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03400 DNA repair and recombination proteins [BR:ack03400]
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C380_11665 methylated-DNA--protein-cysteine methyltransferase
C380_13315 methylated-DNA/protein-cysteine methyltransferase
C380_16340 DNA photolyase FAD-binding protein
C380_19640 deoxyribodipyrimidine photo-lyase
C380_22055 uracil-DNA glycosylase
C380_04905 A/G-specific adenine glycosylase
C380_15385 endonuclease III
C380_10390 DEAD_2 domain-containing protein
C380_04185 NUDIX hydrolase
C380_04550 NUDIX hydrolase
C380_07965 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
C380_11540 adenosine deaminase
C380_16325 deoxyribodipyrimidine photolyase-like protein
C380_11530 alpha-ketoglutarate-dependent dioxygenase AlkB
C380_22565 uracil-DNA glycosylase superfamily protein
C380_16465 HhH-GPD family protein
C380_11670 Ada metal-binding domain-containing protein
C380_02525 DNA-3-methyladenine glycosylase I
C380_04895 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
C380_01595 exodeoxyribonuclease III Xth
C380_08520 exodeoxyribonuclease III Xth
C380_06455 single-stranded-DNA-specific exonuclease RecJ
C380_12335 DNA ligase
C380_06880 DNA polymerase I
C380_20440 excinuclease ABC subunit A
C380_23455 excinuclease ABC subunit A
C380_11305 excinuclease ABC subunit B
C380_15105 uvrC; excinuclease ABC subunit C
C380_16050 hypothetical protein
C380_06850 ATP-dependent DNA helicase UvrD
C380_02120 rpoB; DNA-directed RNA polymerase subunit beta
C380_02125 DNA-directed RNA polymerase subunit beta'
C380_21835 DNA-directed RNA polymerase subunit alpha
C380_04940 rpoZ; DNA-directed RNA polymerase subunit omega
C380_15230 transcription-repair coupling factor
C380_17650 DNA mismatch repair protein MutS
C380_07825 DNA mismatch repair protein Mutl
C380_12970 sbcB; exonuclease I
C380_12630 exodeoxyribonuclease VII large subunit
C380_18030 exodeoxyribonuclease vii small subunit
C380_10950 DNA polymerase III subunit alpha
C380_00010 DNA polymerase III subunit beta
C380_09755 DNA polymerase III subunit beta
C380_12710 DNA polymerase III chi subunit, HolC
C380_22415 holA; DNA polymerase III subunit delta
C380_10690 DNA-directed DNA polymerase
C380_11345 DNA polymerase III subunit epsilon
C380_00180 DNA-directed DNA polymerase
C380_09350 DNA polymerase III subunits gamma and tau
C380_23465 ssDNA-binding protein
C380_18320 d12 class n6 adenine-specific DNA methyltransferase
C380_23320 recombination protein RecA
C380_21330 ruvA; Holliday junction DNA helicase RuvA
C380_21315 ruvB; Holliday junction DNA helicase RuvB
C380_19975 ruvC; Holliday junction resolvase
C380_21575 primosomal protein N'
C380_07500 single-strand-binding protein/primosomal replication protein n
C380_01495 DNA repair protein RadA
C380_22010 ATP-dependent DNA helicase RecG
C380_07265 recO; DNA repair protein RecO
C380_09360 recR; recombination protein RecR
C380_04915 DNA repair protein RecN
C380_00300 rdgC; recombination associated protein
C380_10790 rdgC; recombination associated protein
C380_18220 rdgC; recombination associated protein
C380_09340 UvrD/REP helicase
C380_09335 exonuclease-like protein
C380_12820 hypothetical protein
C380_13590 DNA gyrase subunit A
C380_00015 gyrB; DNA gyrase subunit B
C380_15690 DNA topoisomerase
C380_15090 histone family protein DNA-binding protein
C380_03620 beta-lactamase domain-containing protein
C380_19710 Fis family transcriptional regulator
C380_14185 ihfA; integration host factor subunit alpha
C380_13620 integration host factor beta-subunit
C380_00935 ATP-dependent DNA helicase RecQ
C380_14620 RecQ familyATP-dependent DNA helicase
C380_18795 histone family protein nucleoid-structuring protein H-NS
C380_07110 DNA-directed DNA polymerase
C380_12680 LexA repressor
C380_12995 hypothetical protein
C380_12990 hypothetical protein
C380_12985 DNA polymerase III subunit alpha
C380_23315 regulatory protein RecX
C380_21600 UvrD/REP helicase
C380_00150 dinG; ATP-dependent DNA helicase DinG
C380_10940 helicase c2
C380_00585 dead/h associated domain-containing protein
C380_02370 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
C380_19835 ribonucleotide-diphosphate reductase subunit alpha
C380_19840 ribonucleotide-diphosphate reductase subunit beta
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03554 rdgC; recombination associated protein RdgC
K03554 rdgC; recombination associated protein RdgC
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:ack03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Acidovorax sp. KKS102