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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:aeh03030]
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03410 Base excision repair [PATH:aeh03410]
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03420 Nucleotide excision repair [PATH:aeh03420]
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03430 Mismatch repair [PATH:aeh03430]
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03440 Homologous recombination [PATH:aeh03440]
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 Mlg_1819 exonuclease RecJ
Mlg_2746 single-strand binding protein
Mlg_0003 DNA replication and repair protein RecF
Mlg_1349 DNA replication and repair protein RecO
Mlg_1508 recombination protein RecR
Mlg_1483 recA protein
Mlg_2860 DNA polymerase I
Mlg_2494 Holliday junction DNA helicase subunit RuvA
Mlg_2777 Holliday junction DNA helicase subunit RuvB
Mlg_2493 crossover junction endodeoxyribonuclease RuvC
Mlg_2440 ATP-dependent DNA helicase RecG
Mlg_2298 putative transcriptional regulator
Mlg_1541 putative transcriptional regulator
Mlg_0804 DNA helicase/exodeoxyribonuclease V, beta subunit
Mlg_0803 DNA helicase/exodeoxyribonuclease V, gamma subunit
Mlg_0805 DNA helicase/exodeoxyribonuclease V, alpha subunit
Mlg_1849 DNA polymerase III, alpha subunit
Mlg_0002 DNA polymerase III, beta subunit
Mlg_1510 DNA polymerase III, gamma subunit
Mlg_0402 DNA polymerase III, delta subunit
Mlg_1415 DNA polymerase III, delta prime subunit
Mlg_0668 putative PAS/PAC sensor protein
Mlg_1991 DNA polymerase III, epsilon subunit
Mlg_2006 putative PAS/PAC sensor protein
Mlg_2053 putative PAS/PAC sensor protein
Mlg_0836 Exonuclease, RNase T and DNA polymerase III
Mlg_0557 DNA polymerase III chi subunit, HolC
Mlg_2496 replication restart DNA helicase PriA
Mlg_0583 restart primosome assembly protein PriB
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:aeh03000]
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03021 Transcription machinery [BR:aeh03021]
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03019 Messenger RNA biogenesis [BR:aeh03019]
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03041 Spliceosome
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03011 Ribosome [BR:aeh03011]
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03009 Ribosome biogenesis [BR:aeh03009]
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03016 Transfer RNA biogenesis [BR:aeh03016]
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03012 Translation factors [BR:aeh03012]
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03110 Chaperones and folding catalysts [BR:aeh03110]
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04131 Membrane trafficking [BR:aeh04131]
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04121 Ubiquitin system [BR:aeh04121]
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03051 Proteasome [BR:aeh03051]
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03032 DNA replication proteins [BR:aeh03032]
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03036 Chromosome and associated proteins [BR:aeh03036]
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03400 DNA repair and recombination proteins [BR:aeh03400]
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Mlg_2037 methylated-DNA--protein-cysteine methyltransferase
Mlg_2256 deoxyribodipyrimidine photo-lyase type I
Mlg_2695 A/G-specific DNA-adenine glycosylase
Mlg_0809 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
Mlg_2084 8-oxo-dGTPase
Mlg_0745 NUDIX hydrolase
Mlg_2846 deoxyuridine 5'-triphosphate nucleotidohydrolase
Mlg_0552 phage SPO1 DNA polymerase-related protein
Mlg_1361 Uracil-DNA glycosylase superfamily
Mlg_2649 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase
Mlg_2782 Exodeoxyribonuclease III
Mlg_1735 Endonuclease IV
Mlg_2526 Endonuclease V
Mlg_1819 exonuclease RecJ
Mlg_0681 DNA ligase, NAD-dependent
Mlg_2860 DNA polymerase I
Mlg_2748 Excinuclease ABC subunit A
Mlg_2185 excinuclease ABC, A subunit
Mlg_1088 Excinuclease ABC subunit B
Mlg_1362 Excinuclease ABC subunit C
Mlg_2863 ATP-dependent DNA helicase UvrD
Mlg_1110 conserved hypothetical protein
Mlg_1693 UvrD/REP helicase
Mlg_0451 DNA-directed RNA polymerase subunit beta
Mlg_0452 DNA-directed RNA polymerase subunit beta'
Mlg_0483 DNA-directed RNA polymerase subunit alpha
Mlg_2443 DNA-directed RNA polymerase subunit omega
Mlg_1800 transcription-repair coupling factor
Mlg_1485 DNA mismatch repair protein MutS
Mlg_0571 DNA mismatch repair protein MutL
Mlg_0693 Exodeoxyribonuclease VII large subunit
Mlg_0946 Exodeoxyribonuclease VII small subunit
Mlg_1849 DNA polymerase III, alpha subunit
Mlg_0002 DNA polymerase III, beta subunit
Mlg_0557 DNA polymerase III chi subunit, HolC
Mlg_0402 DNA polymerase III, delta subunit
Mlg_1415 DNA polymerase III, delta prime subunit
Mlg_0668 putative PAS/PAC sensor protein
Mlg_1991 DNA polymerase III, epsilon subunit
Mlg_2006 putative PAS/PAC sensor protein
Mlg_2053 putative PAS/PAC sensor protein
Mlg_0836 Exonuclease, RNase T and DNA polymerase III
Mlg_1510 DNA polymerase III, gamma subunit
Mlg_2746 single-strand binding protein
Mlg_0804 DNA helicase/exodeoxyribonuclease V, beta subunit
Mlg_0803 DNA helicase/exodeoxyribonuclease V, gamma subunit
Mlg_0805 DNA helicase/exodeoxyribonuclease V, alpha subunit
Mlg_1483 recA protein
Mlg_2494 Holliday junction DNA helicase subunit RuvA
Mlg_2777 Holliday junction DNA helicase subunit RuvB
Mlg_2493 crossover junction endodeoxyribonuclease RuvC
Mlg_2496 replication restart DNA helicase PriA
Mlg_0583 restart primosome assembly protein PriB
Mlg_0827 conserved hypothetical protein
Mlg_0828 metallophosphoesterase
Mlg_0589 DNA replication and repair protein RadA
Mlg_0003 DNA replication and repair protein RecF
Mlg_2440 ATP-dependent DNA helicase RecG
Mlg_2298 putative transcriptional regulator
Mlg_1541 putative transcriptional regulator
Mlg_1349 DNA replication and repair protein RecO
Mlg_1508 recombination protein RecR
Mlg_1904 DNA replication and repair protein RecN
Mlg_2410 putative exonuclease, RdgC
Mlg_0949 CRISPR-associated protein, Cas1 family
Mlg_0923 DNA gyrase subunit A
Mlg_0004 DNA gyrase subunit B
Mlg_2632 DNA topoisomerase I
Mlg_2285 histone family protein DNA-binding protein
Mlg_0610 helix-turn-helix, Fis-type
Mlg_0762 integration host factor, alpha subunit
Mlg_0932 integration host factor, beta subunit
Mlg_0870 ATP-dependent DNA helicase RecQ
Mlg_1986 histone family protein nucleoid-structuring protein H-NS
Mlg_2775 DNA-directed DNA polymerase
Mlg_1096 SOS-response transcriptional repressor, LexA
Mlg_1095 conserved hypothetical protein
Mlg_1094 conserved hypothetical protein
Mlg_1175 error-prone DNA polymerase, DnaE-like protein
Mlg_1482 regulatory protein RecX
Mlg_0995 helicase c2
Mlg_1156 helicase c2
Mlg_2102 ribonucleoside-diphosphate reductase, alpha subunit
Mlg_1471 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Mlg_2103 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:aeh03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Alkalilimnicola ehrlichii