|
KO |
09100 Metabolism
|
|
|
09120 Genetic Information Processing
|
|
|
09121 Transcription
|
|
|
09122 Translation
|
|
|
09123 Folding, sorting and degradation
|
|
|
09124 Replication and repair
|
03030 DNA replication [PATH:apg03030]
|
03410 Base excision repair [PATH:apg03410]
|
03420 Nucleotide excision repair [PATH:apg03420]
|
03430 Mismatch repair [PATH:apg03430]
|
03440 Homologous recombination [PATH:apg03440]
|
APA12_21360 recJ; single-stranded-DNA-specific exonuclease RecJ
APA12_25720 ssb; single-strand DNA binding protein Ssb
APA12_12300 recF; DNA replication and repair protein RecF
APA12_19410 recO; DNA repair protein RecO
APA12_00540 recR; DNA recombinase RecR
APA12_00440 recA; DNA recombinase RecA
APA12_21430 DNA polymerase I
APA12_26260 ruvA; Holliday junction resolvase RusA
APA12_26250 ruvB; Holliday junction DNA helicase RuvB
APA12_26270 ruvC; Holliday junction resolvase RuvC
APA12_11040 recG; DNA helicase RecG
APA12_41760 recD_traA; DNA helicase RecD/TraA
APA12_19490 DNA polymerase III alpha subunit
APA12_12310 DNA polymerase III beta subunit
APA12_00520 DNA polymerase III gamma/tau subunit
APA12_25500 DNA polymerase III delta subunit
APA12_11460 dnaC; DNA polymerase III delta prime subunit DnaC
APA12_08710 DNA polymerase III exonuclease epsilon subunit
APA12_20310 DNA polymerase III exonuclease epsilon subunit like protein
APA12_07220 holC; DNA polymerase III chi subunit HolC
APA12_18330 primosomal protein N'
|
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
|
03450 Non-homologous end-joining
|
03460 Fanconi anemia pathway
|
|
|
09126 Chromosome
|
|
|
09125 Information processing in viruses
|
|
|
09130 Environmental Information Processing
|
|
|
09140 Cellular Processes
|
|
|
09150 Organismal Systems
|
|
|
09160 Human Diseases
|
|
|
09180 Brite Hierarchies
|
|
|
09181 Protein families: metabolism
|
|
|
09182 Protein families: genetic information processing
|
03000 Transcription factors [BR:apg03000]
|
03021 Transcription machinery [BR:apg03021]
|
03019 Messenger RNA biogenesis [BR:apg03019]
|
03041 Spliceosome
|
03011 Ribosome [BR:apg03011]
|
03009 Ribosome biogenesis [BR:apg03009]
|
03016 Transfer RNA biogenesis [BR:apg03016]
|
03012 Translation factors [BR:apg03012]
|
03110 Chaperones and folding catalysts [BR:apg03110]
|
04131 Membrane trafficking [BR:apg04131]
|
04121 Ubiquitin system [BR:apg04121]
|
03051 Proteasome [BR:apg03051]
|
03032 DNA replication proteins [BR:apg03032]
|
03036 Chromosome and associated proteins [BR:apg03036]
|
03400 DNA repair and recombination proteins [BR:apg03400]
|
APA12_26690 O6-methylguanine-DNA methyltransferase
APA12_04380 deoxyribodipyrimidine photolyase
APA12_25430 mutY; DNA glycosylase A/G-specific MutY
APA12_25410 endonuclease III
APA12_18370 acetyltransferase
APA12_02370 hydrolase
APA12_21030 phosphohydrolase
APA12_12370 deoxyuridine 5'-triphosphate nucleotidohydrolase
APA12_21860 DNA repair protein for alkylated DNA
APA12_16940 phage SPO1 DNA polymerase-related protein
APA12_04010 bacteriophage-type DNA polymerase
APA12_23560 DNA-3-methyladenine glycosylase I
APA12_12340 formamidopyrimidine-DNA glycosylase
APA12_10830 exodeoxyribonuclease III
APA12_21210 exodeoxyribonuclease III
APA12_21360 recJ; single-stranded-DNA-specific exonuclease RecJ
APA12_19090 DNA ligase
APA12_21430 DNA polymerase I
APA12_14430 uvrA; excinuclease UvrABC subunit A UvrA
APA12_00110 uvrA; excinuclease UvrABC subunit A UvrA
APA12_02400 uvrB; excinuclease UvrABC helicase subunit B UvrB
APA12_10850 uvrC; excinuclease UvrABC subunit C UvrC
APA12_10450 uvrD_rep; DNA helicase II UvrD/Rep
APA12_09270 rpoB; DNA-directed RNA polymerase beta subunit
APA12_09280 rpoC; DNA-directed RNA polymerase beta' subunit
APA12_09550 rpoA; DNA-directed RNA polymerase alpha subunit
APA12_06440 rpoK; DNA-directed RNA polymerase omega subunit
APA12_11060 DNA helicase transcription-repair coupling factor
APA12_16730 mutS; DNA mismatch repair protein MutS
APA12_07410 mutL; DNA mismatch repair protein MutL
APA12_00200 exodeoxyribonuclease VII large subunit
APA12_14920 exodeoxyribonuclease VII small subunit
APA12_19490 DNA polymerase III alpha subunit
APA12_12310 DNA polymerase III beta subunit
APA12_07220 holC; DNA polymerase III chi subunit HolC
APA12_25500 DNA polymerase III delta subunit
APA12_11460 dnaC; DNA polymerase III delta prime subunit DnaC
APA12_08710 DNA polymerase III exonuclease epsilon subunit
APA12_20310 DNA polymerase III exonuclease epsilon subunit like protein
APA12_00520 DNA polymerase III gamma/tau subunit
APA12_25720 ssb; single-strand DNA binding protein Ssb
APA12_41760 recD_traA; DNA helicase RecD/TraA
APA12_00440 recA; DNA recombinase RecA
APA12_26260 ruvA; Holliday junction resolvase RusA
APA12_26250 ruvB; Holliday junction DNA helicase RuvB
APA12_26270 ruvC; Holliday junction resolvase RuvC
APA12_18330 primosomal protein N'
APA12_06980 radA; DNA repair protein RadA
APA12_12300 recF; DNA replication and repair protein RecF
APA12_11040 recG; DNA helicase RecG
APA12_19410 recO; DNA repair protein RecO
APA12_00540 recR; DNA recombinase RecR
APA12_19080 recN; DNA repair protein RecN
APA12_26100 uvrD_rep; DNA helicase II UvrD/Rep
APA12_26110 nuclease
APA12_41090 cas1; CRISPR-associated protein Cas1
APA12_24320 DNA gyrase subunit A
APA12_12290 DNA gyrase subunit B Hsp90-like ATPase
APA12_07530 DNA topoisomerase I
APA12_40350 hu; histone-like bacterial DNA-binding protein HU
APA12_26450 hu; histone-like bacterial DNA-binding protein HU
APA12_16460 hu; histone-like bacterial DNA-binding protein HU
APA12_41420 hu; histone-like bacterial DNA-binding protein HU
APA12_16990 integration host factor DNA-binding alpha subunit
APA12_16930 integration host factor DNA-binding beta subunit
APA12_12590 recQ; DNA helicase RecQ
APA12_02490 impB; DNA polymerase IV
APA12_10940 lexA; transcriptional regulator LexA
APA12_41300 hypothetical protein
APA12_07310 recX; RecA repressor protein RecX
APA12_17830 DNA helicase C2
APA12_10600 ribonucleotide-diphosphate reductase alpha subunit
APA12_02280 vitamin B12-dependent ribonucleotide reductase
APA12_10610 ribonucleotide-diphosphate reductase beta subunit
|
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
|
03029 Mitochondrial biogenesis [BR:apg03029]
|
|
|
09183 Protein families: signaling and cellular processes
|
|
|
09185 Viral protein families
|
|
|
09184 RNA family
|
|
|
09190 Not Included in Pathway or Brite
|