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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:art03030]
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03410 Base excision repair [PATH:art03410]
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 Arth_3376 DNA-(apurinic or apyrimidinic site) lyase
Arth_0774 Uracil-DNA glycosylase
Arth_0177 HhH-GPD family protein
Arth_1508 DNA-3-methyladenine glycosylase
Arth_1539 DNA-(apurinic or apyrimidinic site) lyase
Arth_2500 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase
Arth_0622 Formamidopyrimidine-DNA glycolase
Arth_2407 Formamidopyrimidine-DNA glycolase
Arth_1507 DNA-3-methyladenine glycosylase II
Arth_0014 DNA-3-methyladenine glycosylase I
Arth_3416 conserved hypothetical protein
Arth_1121 exodeoxyribonuclease III Xth
Arth_0419 Exodeoxyribonuclease III
Arth_2063 DNA polymerase I
Arth_1298 DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:art03420]
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03430 Mismatch repair [PATH:art03430]
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03440 Homologous recombination [PATH:art03440]
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03450 Non-homologous end-joining [PATH:art03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:art03000]
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03021 Transcription machinery [BR:art03021]
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03019 Messenger RNA biogenesis [BR:art03019]
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03041 Spliceosome
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03011 Ribosome [BR:art03011]
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03009 Ribosome biogenesis [BR:art03009]
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03016 Transfer RNA biogenesis [BR:art03016]
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03012 Translation factors [BR:art03012]
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03110 Chaperones and folding catalysts [BR:art03110]
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04131 Membrane trafficking [BR:art04131]
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04121 Ubiquitin system [BR:art04121]
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03051 Proteasome [BR:art03051]
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03032 DNA replication proteins [BR:art03032]
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03036 Chromosome and associated proteins [BR:art03036]
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03400 DNA repair and recombination proteins [BR:art03400]
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Arth_1506 methylated-DNA--protein-cysteine methyltransferase
Arth_2747 deoxyribodipyrimidine photo-lyase type I
Arth_0774 Uracil-DNA glycosylase
Arth_1508 DNA-3-methyladenine glycosylase
Arth_0177 HhH-GPD family protein
Arth_3376 DNA-(apurinic or apyrimidinic site) lyase
Arth_0787 helicase domain protein
Arth_1522 NUDIX hydrolase
Arth_1484 NUDIX hydrolase
Arth_0695 NUDIX hydrolase
Arth_2308 NUDIX hydrolase
Arth_0808 NUDIX hydrolase
Arth_2561 NUDIX hydrolase
Arth_1636 deoxyuridine 5'-triphosphate nucleotidohydrolase
Arth_3416 conserved hypothetical protein
Arth_1507 DNA-3-methyladenine glycosylase II
Arth_0014 DNA-3-methyladenine glycosylase I
Arth_1539 DNA-(apurinic or apyrimidinic site) lyase
Arth_2500 Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase
Arth_0622 Formamidopyrimidine-DNA glycolase
Arth_2407 Formamidopyrimidine-DNA glycolase
Arth_1121 exodeoxyribonuclease III Xth
Arth_0419 Exodeoxyribonuclease III
Arth_1298 DNA ligase, NAD-dependent
Arth_2063 DNA polymerase I
Arth_2079 Excinuclease ABC subunit A
Arth_0906 excinuclease ABC, A subunit
Arth_2070 Excinuclease ABC subunit B
Arth_2082 Excinuclease ABC subunit C
Arth_0813 ATP-dependent DNA helicase PcrA
Arth_2753 ATP-dependent DNA helicase, Rep family
Arth_2756 UvrD/REP helicase
Arth_2984 DNA-directed RNA polymerase subunit beta
Arth_2983 DNA-directed RNA polymerase subunit beta'
Arth_2940 DNA-directed RNA polymerase subunit alpha
Arth_2258 DNA-directed RNA polymerase, omega subunit
Arth_1245 transcription-repair coupling factor
Arth_2835 Exodeoxyribonuclease VII large subunit
Arth_2836 Exodeoxyribonuclease VII small subunit
Arth_1581 DNA polymerase III, alpha subunit
Arth_0002 DNA polymerase III, beta subunit
Arth_2243 DNA polymerase III, delta subunit
Arth_0716 DNA polymerase III, delta prime subunit
Arth_2759 DNA polymerase III, epsilon subunit
Arth_3970 DNA polymerase III, epsilon subunit
Arth_2578 Exonuclease, RNase T and DNA polymerase III
Arth_0555 DNA polymerase III, subunits gamma and tau
Arth_4232 single-strand binding protein
Arth_4119 single-strand binding protein
Arth_4401 single-strand binding protein
Arth_2420 single-strand binding protein
Arth_0872 T/G mismatch-specific endonuclease
Arth_1460 recA protein
Arth_2302 Holliday junction DNA helicase subunit RuvA
Arth_2301 Holliday junction DNA helicase subunit RuvB
Arth_2303 Holliday junction endonuclease RuvC
Arth_2255 primosomal protein N' (replication factor Y) (superfamily II helicase)
Arth_2573 SMC domain protein
Arth_2574 Exodeoxyribonuclease I subunit D
Arth_0200 DNA repair protein RadA
Arth_0004 DNA replication and repair protein RecF
Arth_2510 ATP-dependent DNA helicase RecG
Arth_2225 DNA replication and repair protein RecO
Arth_0554 DNA replication and repair protein RecR
Arth_1518 DNA replication and repair protein RecN
Arth_3912 protein of unknown function DUF853, NPT hydrolase putative
Arth_0295 DNA end-binding protein Ku
Arth_0294 ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD ligase module
Arth_3426 conserved hypothetical protein
Arth_0007 DNA gyrase subunit A
Arth_1627 DNA topoisomerase IV subunit A
Arth_0006 DNA gyrase subunit B
Arth_1619 DNA topoisomerase IV subunit B
Arth_3355 DNA topoisomerase I
Arth_3091 conserved hypothetical protein
Arth_3916 histone family protein DNA-binding protein
Arth_0672 ATP-dependent DNA helicase, RecQ-like protein
Arth_0948 ATP-dependent DNA helicase, RecQ family
Arth_2021 DNA-directed DNA polymerase
Arth_1559 DNA-directed DNA polymerase
Arth_3841 DNA-directed DNA polymerase
Arth_3840 SOS response UmuD protein, Serine peptidase, MEROPS family S24
Arth_1468 SOS-response transcriptional repressor, LexA
Arth_2318 DNA polymerase III, alpha subunit
Arth_1461 regulatory protein RecX
Arth_1467 helicase c2
Arth_0623 ATP dependent helicase, Lhr family
Arth_3015 NUDIX hydrolase
Arth_1520 NUDIX hydrolase
Arth_2356 ribonucleoside-diphosphate reductase class Ib alpha subunit
Arth_2355 ribonucleoside-diphosphate reductase class Ib beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:art03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Arthrobacter sp. FB24