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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:baq03030]
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03410 Base excision repair [PATH:baq03410]
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03420 Nucleotide excision repair [PATH:baq03420]
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03430 Mismatch repair [PATH:baq03430]
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03440 Homologous recombination [PATH:baq03440]
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 BACAU_2488 recJ; single-stranded-DNA-specific exonuclease
BACAU_3385 ywpH; Single-stranded DNA-binding protein SSB
BACAU_3807 ssb; Single-stranded DNA-binding protein SSB
BACAU_0004 recF; DNA replication and repair protein recF
BACAU_2370 recO; DNA repair protein recO Recombination protein O
BACAU_0022 recR; Recombination protein recR
BACAU_1649 recA; Protein recA Recombinase A
BACAU_2630 polA; DNA polymerase I
BACAU_2501 ruvA; Holliday junction DNA helicase RuvA
BACAU_2500 ruvB; Holliday junction DNA helicase RuvB
BACAU_1541 recG; ATP-dependent DNA helicase RecG
BACAU_2474 recD; exodeoxyribonuclease V alpha subunit
BACAU_2645 dnaE; DNA polymerase III subunit alpha
BACAU_1613 polC; DNA polymerase III PolC
BACAU_0002 dnaN; DNA polymerase III subunit beta
BACAU_0020 dnaX; DNA polymerase III subunits gamma and tau
BACAU_2398 holA; DNA polymerase III subunit delta
BACAU_0032 holB; DNA polymerase III subunit delta'
BACAU_1525 priA; primosomal protein N' (replication factor Y), superfamily II helicase
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining [PATH:baq03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:baq03000]
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03021 Transcription machinery [BR:baq03021]
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03019 Messenger RNA biogenesis [BR:baq03019]
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03041 Spliceosome
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03011 Ribosome [BR:baq03011]
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03009 Ribosome biogenesis [BR:baq03009]
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03016 Transfer RNA biogenesis [BR:baq03016]
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03012 Translation factors [BR:baq03012]
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03110 Chaperones and folding catalysts [BR:baq03110]
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04131 Membrane trafficking [BR:baq04131]
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04121 Ubiquitin system [BR:baq04121]
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03051 Proteasome [BR:baq03051]
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03032 DNA replication proteins [BR:baq03032]
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03036 Chromosome and associated proteins [BR:baq03036]
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03400 DNA repair and recombination proteins [BR:baq03400]
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BACAU_1309 ogt; Methylated DNA-protein cysteine methyltransferase
BACAU_3545 ung; uracil-DNA glycosylase
BACAU_3603 yxlJ; DNA-3-methyladenine glycosylase
BACAU_0847 mutY; A/G-specific adenine glycosylase
BACAU_2057 nth; endonuclease III
BACAU_0483 RNA pyrophosphohydrolase
BACAU_3228 yvcI; NUDIX hydrolase
BACAU_3659 mutT3; 7,8-dihydro-8-oxoguanine triphosphatase
BACAU_2776 ytkD; Nucleoside triphosphatase ytkD
BACAU_0391 mutT1; MutT/NUDIX family protein
BACAU_1719 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
BACAU_3805 adaA; AraC family transcriptional regulator
BACAU_3804 adaB; methylated-DNA-protein-cysteineS-methyltransferase
BACAU_0794 yfjP; DNA-3-methyladenine glycosylase II
BACAU_2629 mutM; formamidopyrimidine-DNA glycosylase
BACAU_3803 exoA; exodeoxyribonuclease III
BACAU_2355 yqfS; deoxyribonuclease IV
BACAU_3363 ywqL; deoxyribonuclease V
BACAU_2488 recJ; single-stranded-DNA-specific exonuclease
BACAU_0673 ligA; DNA ligase (NAD+)
BACAU_2630 polA; DNA polymerase I
BACAU_3259 uvrA; UvrABC system protein A UvrA protein
BACAU_3260 uvrB; UvrABC system protein B Protein uvrB
BACAU_2571 uvrC; UvrABC system protein C Protein uvrC
BACAU_3087 yvgS; DNA helicase II / ATP-dependent DNA helicase PcrA
BACAU_0672 pcrA; DNA helicase II / ATP-dependent DNA helicase PcrA
BACAU_1145 yjcD; DNA helicase II / ATP-dependent DNA helicase PcrA
BACAU_0107 rpoB; DNA-directed RNA polymerase subunit beta
BACAU_0108 rpoC; DNA-directed RNA polymerase subunit beta'
BACAU_0143 rpoA; DNA-directed RNA polymerase subunit alpha
BACAU_3466 rpoE; DNA-directed RNA polymerase subunit delta
BACAU_1523 rpoZ; DNA-directed RNA polymerase subunit omega
BACAU_0056 mfd; transcription-repair coupling factor (superfamily II helicase)
BACAU_1660 mutS; DNA mismatch repair protein mutS
BACAU_2582 mutSB; MutS2 protein
BACAU_1661 mutL; DNA mismatch repair protein
BACAU_2276 xseA; exodeoxyribonuclease VII large subunit
BACAU_2275 xseB; exodeoxyribonuclease VII small subunit
BACAU_2645 dnaE; DNA polymerase III subunit alpha
BACAU_1613 polC; DNA polymerase III PolC
BACAU_0002 dnaN; DNA polymerase III subunit beta
BACAU_2398 holA; DNA polymerase III subunit delta
BACAU_0032 holB; DNA polymerase III subunit delta'
BACAU_0020 dnaX; DNA polymerase III subunits gamma and tau
BACAU_3385 ywpH; Single-stranded DNA-binding protein SSB
BACAU_3807 ssb; Single-stranded DNA-binding protein SSB
BACAU_2474 recD; exodeoxyribonuclease V alpha subunit
BACAU_1649 recA; Protein recA Recombinase A
BACAU_2501 ruvA; Holliday junction DNA helicase RuvA
BACAU_2500 ruvB; Holliday junction DNA helicase RuvB
BACAU_1525 priA; primosomal protein N' (replication factor Y), superfamily II helicase
BACAU_1041 sbcC; Laminin-like protein epi-1
BACAU_1040 sbcD; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Phosphoglyceromutase
BACAU_0087 radA; radA-like DNA repair protein
BACAU_0004 recF; DNA replication and repair protein recF
BACAU_1541 recG; ATP-dependent DNA helicase RecG
BACAU_2370 recO; DNA repair protein recO Recombination protein O
BACAU_0022 recR; Recombination protein recR
BACAU_2270 recN; DNA repair protein recN Recombination protein N
BACAU_2054 recU; Holliday junction resolvase recU
BACAU_1039 rexA; ATP-dependent nuclease subunit A
BACAU_1038 addB; ATP-dependent nuclease subunit B
BACAU_1296 ykoV; DNA end-binding protein Ku
BACAU_1295 ligD; ATP-dependent DNA ligase
BACAU_0007 gyrA; DNA gyrase subunit A
BACAU_0006 gyrB1; DNA topoisomerase IV subunit B
BACAU_1566 topA; DNA topoisomerase I
BACAU_2103 hbs; DNA-binding protein HU DNA-binding protein II
BACAU_0570 yqaK; putative protein yqaK
BACAU_1895 recQ1; ATP-dependent DNA helicase RecQ
BACAU_2127 recQ3; ATP-dependent DNA helicase RecQ
BACAU_2231 yqjH; DNA polymerase IV
BACAU_1724 lexA; LexA repressor
BACAU_0834 recX; Regulatory protein recX
BACAU_2583 yshC; putative protein YshC
BACAU_2036 dinG1; ATP-dependent DNA helicase DinG
BACAU_2063 dinG3; bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
BACAU_1692 nrdE; ribonucleotide-diphosphate reductase subunit alpha
BACAU_1693 nrdF; ribonucleotide-diphosphate reductase subunit beta
BACAU_2649 ytqI; hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:baq03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Bacillus velezensis CAU B946