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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:bce03030]
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03410 Base excision repair [PATH:bce03410]
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03420 Nucleotide excision repair [PATH:bce03420]
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03430 Mismatch repair [PATH:bce03430]
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03440 Homologous recombination [PATH:bce03440]
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 BC4403 Single-stranded-DNA-specific exonuclease recJ
BC2154 Single-strand DNA binding protein
BC5475 Single-strand DNA binding protein
BC0004 DNA replication and repair protein recF
BC4295 DNA repair protein recO
BC0026 Recombination protein recR
BC3779 RecA protein
BC4587 DNA polymerase I
BC4415 Holliday junction DNA helicase ruvA
BC4414 Holliday junction DNA helicase ruvB
BC3853 ATP-dependent DNA helicase recG
BC4389 Exodeoxyribonuclease V alpha chain
BC4605 DNA polymerase III alpha subunit
BC3816 DNA polymerase III alpha subunit
BC0002 DNA polymerase III, beta chain
BC2693 DNA polymerase III, beta chain
BC0024 DNA polymerase III subunit gamma/tau
BC4321 DNA polymerase III, delta subunit
BC0037 DNA polymerase III, delta' subunit
BC3611 DNA polymerase III alpha subunit
BC3866 Primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:bce03000]
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03021 Transcription machinery [BR:bce03021]
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03019 Messenger RNA biogenesis [BR:bce03019]
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03041 Spliceosome
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03011 Ribosome [BR:bce03011]
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03009 Ribosome biogenesis [BR:bce03009]
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03016 Transfer RNA biogenesis [BR:bce03016]
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03012 Translation factors [BR:bce03012]
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03110 Chaperones and folding catalysts [BR:bce03110]
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04131 Membrane trafficking [BR:bce04131]
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04121 Ubiquitin system [BR:bce04121]
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03051 Proteasome
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03032 DNA replication proteins [BR:bce03032]
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03036 Chromosome and associated proteins [BR:bce03036]
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03400 DNA repair and recombination proteins [BR:bce03400]
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BC2024 O6-methylguanine-DNA methyltransferase
BC3137 Deoxyribodipyrimidine photolyase
BC5398 Uracil-DNA glycosylase
BC0885 DNA-3-methyladenine glycosylase II
BC0504 A/G-specific adenine DNA glycosylase
BC1548 Endonuclease III
BC5157 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
BC0540 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
BC3058 Phosphohydrolase (MutT/nudix family protein)
BC3037 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)
BC0623 Phosphohydrolase (MutT/nudix family protein)
BC1752 Phosphohydrolase (MutT/nudix family protein)
BC4785 Phosphohydrolase (MutT/nudix family protein)
BC3740 ADA regulatory protein
BC3741 O6-methylguanine-DNA methyltransferase
BC1529 DNA polymerase, bacteriophage-type
BC3742 DNA-3-methyladenine glycosylase II
BC0468 DNA-3-methyladenine glycosylase II
BC4586 Formamidopyrimidine-DNA glycosylase
BC3739 Exodeoxyribonuclease III
BC4282 Endonuclease IV
BC4403 Single-stranded-DNA-specific exonuclease recJ
BC0341 NAD-dependent DNA ligase
BC4587 DNA polymerase I
BC5167 Excinuclease ABC subunit A
BC5168 Excinuclease ABC subunit B
BC4520 Excinuclease ABC subunit C
BC0340 DNA helicase II
BC1041 ATP-dependent DNA helicase rep
BC1223 ATP-dependent DNA helicase
BC0122 DNA-directed RNA polymerase beta chain
BC0123 DNA-directed RNA polymerase beta' chain
BC0158 DNA-directed RNA polymerase alpha chain
BC5339 DNA-directed RNA polymerase delta chain
BC3868 DNA-directed RNA polymerase omega chain
BC0058 Transcription-repair coupling factor
BC3769 DNA mismatch repair protein mutS
BC3480 DNA mismatch repair protein mutS
BC3768 DNA mismatch repair protein mutL
BC4179 Exodeoxyribonuclease VII large subunit
BC4178 Exodeoxyribonuclease VII small subunit
BC4605 DNA polymerase III alpha subunit
BC3816 DNA polymerase III alpha subunit
BC0002 DNA polymerase III, beta chain
BC2693 DNA polymerase III, beta chain
BC4321 DNA polymerase III, delta subunit
BC0037 DNA polymerase III, delta' subunit
BC3611 DNA polymerase III alpha subunit
BC0024 DNA polymerase III subunit gamma/tau
BC2154 Single-strand DNA binding protein
BC5475 Single-strand DNA binding protein
BC4389 Exodeoxyribonuclease V alpha chain
BC3779 RecA protein
BC4415 Holliday junction DNA helicase ruvA
BC4414 Holliday junction DNA helicase ruvB
BC3866 Primosomal protein N'
BC1852 Exonuclease SbcC
BC2296 Exonuclease SbcC
BC1857 Exonuclease SbcD
BC2295 Exonuclease SbcD
BC0103 DNA repair protein RadA
BC0004 DNA replication and repair protein recF
BC3853 ATP-dependent DNA helicase recG
BC4295 DNA repair protein recO
BC0026 Recombination protein recR
BC1554 Recombination protein recU
BC1138 ATP-dependent nuclease subunit A
BC1137 ATP-dependent nuclease subunit B
BC0826 hypothetical DNA-binding protein
BC0006 DNA gyrase subunit A
BC0005 DNA gyrase subunit B
BC3831 DNA topoisomerase I
BC1510 DNA-binding protein HU
BC2313 DNA-binding protein HU
BC3728 DNA-binding protein HU
BC2815 ATP-dependent DNA helicase recQ
BC1485 ATP-dependent DNA helicase recQ
BC4142 DNA polymerase IV
BCp0006 LexA repressor
BC3690 LexA repressor
BC3704 LexA repressor
BC0498 Regulatory protein recX
BC4553 DNA polymerase X family
BC1565 ATP-dependent helicase, DinG family
BC1354 Ribonucleoside-diphosphate reductase alpha chain
BC1355 Ribonucleoside-diphosphate reductase beta chain
BC4608 phosphoesterase, DHH family protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K10979 ku; DNA end-binding protein Ku
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:bce03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Bacillus cereus ATCC 14579