KEGG Orthology (KO) - Brucella suis VBI22

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:bsv03030]
     03410 Base excision repair [PATH:bsv03410]
       BSVBI22_A0166 nth; endonuclease III
       BSVBI22_A0494 mutY; A/G-specific adenine glycosylase
       BSVBI22_A2179 mutM; formamidopyrimidine-DNA glycosylase
       BSVBI22_A1642 base-excision DNA repair protein
       BSVBI22_B0181 tag; DNA-3-methyladenine glycosidase I
       BSVBI22_A0644 phage SPO1 DNA polymerase-related protein
       BSVBI22_A0616 phage SPO1 DNA polymerase-related protein
       BSVBI22_A0869 xth-1; exodeoxyribonuclease III
       BSVBI22_A2000 xth-2; exodeoxyribonuclease III
       BSVBI22_A0123 polA; DNA polymerase I
       BSVBI22_A1266 recJ; single-stranded-DNA-specific exonuclease RecJ
       BSVBI22_A1414 ligA; NAD-dependent DNA ligase LigA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
     03420 Nucleotide excision repair [PATH:bsv03420]
     03430 Mismatch repair [PATH:bsv03430]
     03440 Homologous recombination [PATH:bsv03440]
     03450 Non-homologous end-joining
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:bsv03000]
     03021 Transcription machinery [BR:bsv03021]
     03019 Messenger RNA biogenesis [BR:bsv03019]
     03041 Spliceosome
     03011 Ribosome [BR:bsv03011]
     03009 Ribosome biogenesis [BR:bsv03009]
     03016 Transfer RNA biogenesis [BR:bsv03016]
     03012 Translation factors [BR:bsv03012]
     03110 Chaperones and folding catalysts [BR:bsv03110]
     04131 Membrane trafficking [BR:bsv04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:bsv03032]
     03036 Chromosome and associated proteins [BR:bsv03036]
     03400 DNA repair and recombination proteins [BR:bsv03400]
       BSVBI22_A0185 ogt; methylated-DNA--protein-cysteine methyltransferase
       BSVBI22_A0494 mutY; A/G-specific adenine glycosylase
       BSVBI22_A0166 nth; endonuclease III
       BSVBI22_A1935 mutator mutT protein, putative
       BSVBI22_A1671 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
       BSVBI22_A0369 ada; ada regulatory protein
       BSVBI22_B0881 ada regulatory protein, putative
       BSVBI22_B0527 alkB; alkylated DNA repair protein AlkB
       BSVBI22_A0644 phage SPO1 DNA polymerase-related protein
       BSVBI22_A0616 phage SPO1 DNA polymerase-related protein
       BSVBI22_A1642 base-excision DNA repair protein
       BSVBI22_B0181 tag; DNA-3-methyladenine glycosidase I
       BSVBI22_A2179 mutM; formamidopyrimidine-DNA glycosylase
       BSVBI22_A0869 xth-1; exodeoxyribonuclease III
       BSVBI22_A2000 xth-2; exodeoxyribonuclease III
       BSVBI22_A1266 recJ; single-stranded-DNA-specific exonuclease RecJ
       BSVBI22_A1414 ligA; NAD-dependent DNA ligase LigA
       BSVBI22_A0123 polA; DNA polymerase I
       BSVBI22_A1100 uvrA; excinuclease ABC subunit A
       BSVBI22_A1506 uvrB; excinuclease ABC subunit B
       BSVBI22_A0695 uvrC; excinuclease ABC subunit C
       BSVBI22_A1407 DNA helicase II
       BSVBI22_A1239 rpoB; DNA-directed RNA polymerase subunit beta
       BSVBI22_A1238 rpoC; DNA-directed RNA polymerase subunit beta'
       BSVBI22_A1205 rpoA; DNA-directed RNA polymerase subunit alpha
       BSVBI22_A0647 rpoZ; DNA-directed RNA polymerase subunit omega
       BSVBI22_B0573 mfd; transcription-repair coupling factor
       BSVBI22_A0147 mutS; DNA mismatch repair protein MutS
       BSVBI22_B0214 mutL; DNA mismatch repair protein
       BSVBI22_B0756 xseA; exodeoxyribonuclease VII large subunit
       BSVBI22_A0432 xseB; exodeoxyribonuclease VII small subunit
       BSVBI22_A0821 dnaE; DNA polymerase III subunit alpha
       BSVBI22_A0002 dnaN; DNA polymerase III subunit beta
       BSVBI22_A0686 DNA polymerase III subunit chi
       BSVBI22_A2053 holA; DNA polymerase III subunit delta
       BSVBI22_A0989 DNA polymerase III subunit delta'
       BSVBI22_A2067 dnaQ; DNA polymerase III subunit epsilon
       BSVBI22_B0619 exonuclease, putative
       BSVBI22_B0997 DNA polymerase III subunit epsilon
       BSVBI22_A0034 dnaX; DNA polymerase III subunits gamma and tau
       BSVBI22_A1098 single-stranded DNA-binding protein family
       BSVBI22_A1198 recA; recombinase A
       BSVBI22_A1699 ruvA; Holliday junction DNA helicase RuvA
       BSVBI22_A1698 ruvB; Holliday junction DNA helicase RuvB
       BSVBI22_A1700 ruvC; Holliday junction resolvase
       BSVBI22_A1800 priA; primosome assembly protein PriA
       BSVBI22_A0450 radA; DNA repair protein RadA
       BSVBI22_A0003 recF; recombination protein F
       BSVBI22_B0575 recG; ATP-dependent DNA helicase RecG
       BSVBI22_A0660 recO; DNA repair protein RecO
       BSVBI22_A0032 recR; recombination protein RecR
       BSVBI22_A1415 recN; DNA repair protein RecN
       BSVBI22_A2099 UvrD/Rep family helicase
       BSVBI22_A2098 hypothetical protein
       BSVBI22_A0559 hypothetical protein
       BSVBI22_A1093 gyrA; DNA gyrase subunit A
       BSVBI22_A0125 gyrB; DNA gyrase subunit B
       BSVBI22_B0598 topA; DNA topoisomerase I
       BSVBI22_A1101 DNA-binding protein HU
       BSVBI22_A0774 ihfA; integration host factor subunit alpha
       BSVBI22_A0153 ihfB; integration host factor subunit beta
       BSVBI22_B0609 DNA polymerase IV
       BSVBI22_A1140 lexA; LexA repressor
       BSVBI22_A0071 hypothetical protein
       BSVBI22_A0070 hypothetical protein
       BSVBI22_A0069 dnaE2; error-prone DNA polymerase
       BSVBI22_B0818 DEAD-box ATP dependent DNA helicase
       BSVBI22_B0312 nrdE; ribonucleotide-diphosphate reductase subunit alpha
       BSVBI22_A1039 ribonucleotide-diphosphate reductase subunit alpha
       BSVBI22_B0313 nrdF; ribonucleotide-diphosphate reductase subunit beta
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
     03029 Mitochondrial biogenesis [BR:bsv03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: May 7, 2024