09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:btn03030]
03410 Base excision repair [PATH:btn03410]
BTF1_05440 endonuclease III BTF1_25475 uracil-DNA glycosylase BTF1_00325 A/G-specific adenine glycosylase BTF1_01980 3-methyladenine DNA glycosylase BTF1_21470 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase BTF1_00150 endonuclease III domain protein BTF1_16765 DNA-3-methyladenine glycosidase BTF1_05350 uracil-DNA glycosylase BTF1_16750 exodeoxyribonuclease III BTF1_20035 endonuclease IV BTF1_21475 DNA polymerase I BTF1_20655 single-stranded-DNA-specific exonuclease RecJ BTF1_30322 hypothetical protein BTF1_29392 NAD-dependent DNA ligase BTF1_31107 ligA; NAD-dependent DNA ligase LigA BTF1_27585 ligA; NAD-dependent DNA ligase LigA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:btn03420]
03430 Mismatch repair [PATH:btn03430]
03440 Homologous recombination [PATH:btn03440]
03450 Non-homologous end-joining
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:btn03000]
03021 Transcription machinery [BR:btn03021]
03019 Messenger RNA biogenesis [BR:btn03019]
03041 Spliceosome
03011 Ribosome [BR:btn03011]
03009 Ribosome biogenesis [BR:btn03009]
03016 Transfer RNA biogenesis [BR:btn03016]
03012 Translation factors [BR:btn03012]
03110 Chaperones and folding catalysts [BR:btn03110]
04131 Membrane trafficking [BR:btn04131]
04121 Ubiquitin system [BR:btn04121]
03051 Proteasome
03032 DNA replication proteins [BR:btn03032]
03036 Chromosome and associated proteins [BR:btn03036]
03400 DNA repair and recombination proteins [BR:btn03400]
BTF1_07515 methylated DNA-protein cysteine methyltransferase BTF1_10575 deoxyribodipyrimidine photolyase BTF1_13235 deoxyribodipyrimidine photolyase BTF1_25475 uracil-DNA glycosylase BTF1_01980 3-methyladenine DNA glycosylase BTF1_00325 A/G-specific adenine glycosylase BTF1_05440 endonuclease III BTF1_12680 mutT/nudix family protein BTF1_00825 mutT/nudix family protein BTF1_10950 MutT/Nudix family protein BTF1_12830 mutT/nudix family protein BTF1_24160 MutT/NUDIX family protein BTF1_06515 phosphohydrolase (MutT/nudix family protein) BTF1_00425 mutT/nudix family protein BTF1_22510 MutT/NUDIX family protein phosphohydrolase BTF1_10910 mutT/nudix family protein BTF1_31322 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut BTF1_16755 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase BTF1_10745 AraC family transcriptional regulator BTF1_16760 methylated DNA-protein cysteine methyltransferase BTF1_05350 uracil-DNA glycosylase BTF1_00150 endonuclease III domain protein BTF1_16765 DNA-3-methyladenine glycosidase BTF1_21470 formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase BTF1_16750 exodeoxyribonuclease III BTF1_20035 endonuclease IV BTF1_20655 single-stranded-DNA-specific exonuclease RecJ BTF1_30322 hypothetical protein BTF1_29392 NAD-dependent DNA ligase BTF1_31107 ligA; NAD-dependent DNA ligase LigA BTF1_27585 ligA; NAD-dependent DNA ligase LigA BTF1_21475 DNA polymerase I BTF1_24215 uvrA; excinuclease ABC subunit A BTF1_24220 excinuclease ABC subunit B BTF1_21145 uvrC; excinuclease ABC subunit C BTF1_02975 UvrD/Rep family helicase BTF1_03865 ATP-dependent DNA helicase, UvrD/REP family protein BTF1_02360 DNA helicase II BTF1_30442 UvrD/REP helicase BTF1_27580 ATP-dependent DNA helicase PcrA BTF1_11595 UvrD/REP helicase BTF1_31317 ATP-dependent DNA helicase PcrA BTF1_26540 rpoB; DNA-directed RNA polymerase subunit beta BTF1_26545 DNA-directed RNA polymerase subunit beta' BTF1_26720 DNA-directed RNA polymerase subunit alpha BTF1_25100 DNA-directed RNA polymerase subunit delta BTF1_17645 rpoZ; DNA-directed RNA polymerase subunit omega BTF1_26290 transcription-repair coupling factor BTF1_16900 DNA mismatch repair protein MutS BTF1_21305 recombination and DNA strand exchange inhibitor protein BTF1_14675 DNA mismatch repair protein mutS BTF1_16895 mutL; DNA mismatch repair protein BTF1_19300 xseA; exodeoxyribonuclease VII large subunit BTF1_19295 exodeoxyribonuclease VII small subunit BTF1_21565 dnaE; DNA polymerase III DnaE BTF1_31082 DNA polymerase III subunit alpha BTF1_31092 dnaE; DNA polymerase III DnaE BTF1_17380 polC; DNA polymerase III PolC BTF1_26060 DNA polymerase III subunit beta BTF1_10945 DNA polymerase III subunit beta BTF1_20230 holA; DNA polymerase III subunit delta BTF1_26180 DNA polymerase III subunit delta' BTF1_16100 DNA polymerase III subunit epsilon BTF1_26140 DNA polymerase III subunits gamma and tau BTF1_29892 DNA polymerase III subunits gamma and tau BTF1_31252 single-strand binding protein family BTF1_08265 single-stranded DNA-binding protein BTF1_25975 single-stranded DNA-binding protein BTF1_20580 helicase BTF1_31262 DNA recombination protein RecA BTF1_16950 recA; recombinase A BTF1_20715 ruvA; Holliday junction DNA helicase RuvA BTF1_20710 Holliday junction DNA helicase RuvB BTF1_31447 ruvC; Holliday junction resolvase BTF1_17635 primosome assembly protein PriA BTF1_09000 exonuclease BTF1_08995 exonuclease SbcD BTF1_28667 hypothetical protein BTF1_26435 DNA repair protein RadA BTF1_26070 recF; recombination protein F BTF1_17565 ATP-dependent DNA helicase RecG BTF1_20100 recO; DNA repair protein RecO BTF1_26150 recR; recombination protein RecR BTF1_19270 DNA repair protein RecN BTF1_05455 recU; Holliday junction-specific endonuclease BTF1_03395 ATP-dependent nuclease subunit A BTF1_03390 ATP-dependent nuclease subunit B BTF1_01715 Ku protein BTF1_29647 DNA gyrase subunit A BTF1_26080 DNA gyrase subunit A BTF1_26075 gyrB; DNA gyrase subunit B BTF1_17455 DNA topoisomerase I BTF1_05255 DNA-binding protein HU BTF1_16685 HU family DNA-binding protein BTF1_31966 small DNA-binding protein BTF1_09070 DNA-binding protein HU BTF1_15845 recT; recombination and repair protein RecT BTF1_11610 ATP-dependent DNA helicase RecQ BTF1_05125 ATP-dependent DNA helicase RecQ BTF1_19045 DNA polymerase IV BTF1_16490 LexA repressor BTF1_16550 LexA repressor BTF1_00295 recX; recombination regulator RecX BTF1_21310 hypothetical protein BTF1_05415 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon BTF1_05515 hypothetical protein BTF1_31687 ribonucleotide-diphosphate reductase subunit alpha BTF1_04470 ribonucleotide-diphosphate reductase subunit alpha BTF1_31692 nrdF; ribonucleotide-diphosphate reductase subunit beta BTF1_04475 nrdF; ribonucleotide-diphosphate reductase subunit beta BTF1_21580 DHH subfamily 1 protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03048 rpoE; DNA-directed RNA polymerase subunit delta K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03555 mutS; DNA mismatch repair protein MutS K07456 mutS2; DNA mismatch repair protein MutS2 K07456 mutS2; DNA mismatch repair protein MutS2 K03572 mutL; DNA mismatch repair protein MutL K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K03546 sbcC; DNA repair protein SbcC/Rad50 K03547 sbcD; DNA repair protein SbcD/Mre11 K03547 sbcD; DNA repair protein SbcD/Mre11 K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K03700 recU; recombination protein U K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] K10979 ku; DNA end-binding protein Ku K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta K07455 recT; recombination protein RecT K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K01356 lexA; repressor LexA [EC:3.4.21.88] K03565 recX; regulatory protein K02347 polX; DNA polymerase (family X) K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:btn03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite