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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:bvu03030]
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03410 Base excision repair [PATH:bvu03410]
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03420 Nucleotide excision repair [PATH:bvu03420]
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03430 Mismatch repair [PATH:bvu03430]
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03440 Homologous recombination [PATH:bvu03440]
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 BVU_2071 putative single-stranded-DNA-specific exonuclease
BVU_4100 single-strand binding protein
BVU_2859 single-strand DNA-binding protein
BVU_2620 DNA replication and repair protein RecF
BVU_1391 DNA repair protein
BVU_2971 recombination protein recR
BVU_2377 RecA
BVU_1207 DNA polymerase I
BVU_1658 Holliday junction DNA helicase ruvA
BVU_1289 Holliday junction DNA helicase RuvB
BVU_3033 crossover junction endodeoxyribonuclease RuvC
BVU_0471 ATP-dependent DNA helicase RecG
BVU_3429 transcriptional regulator
BVU_2385 conserved hypothetical protein
BVU_1498 conserved hypothetical protein
BVU_3743 conserved hypothetical protein
BVU_3409 ATP-dependent exonuclease V, alpha subunit - helicase superfamily I member
BVU_1885 DNA polymerase III alpha subunit
BVU_2894 DNA polymerase III, beta chain
BVU_2249 putative DNA polymerase III
BVU_3312 conserved hypothetical protein
BVU_1829 putative DNA polymerase III, delta subunit
BVU_3037 putative exonuclease/DNA polymerase III epsilon c
BVU_2893 DNA Pol III epsilon chain
BVU_1471 putative primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:bvu03000]
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03021 Transcription machinery [BR:bvu03021]
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03019 Messenger RNA biogenesis [BR:bvu03019]
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03041 Spliceosome [BR:bvu03041]
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03011 Ribosome [BR:bvu03011]
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03009 Ribosome biogenesis [BR:bvu03009]
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03016 Transfer RNA biogenesis [BR:bvu03016]
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03012 Translation factors [BR:bvu03012]
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03110 Chaperones and folding catalysts [BR:bvu03110]
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04131 Membrane trafficking [BR:bvu04131]
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04121 Ubiquitin system [BR:bvu04121]
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03051 Proteasome [BR:bvu03051]
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03032 DNA replication proteins [BR:bvu03032]
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03036 Chromosome and associated proteins [BR:bvu03036]
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03400 DNA repair and recombination proteins [BR:bvu03400]
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BVU_3221 methylated-DNA-protein-cysteine methyltransferase
BVU_4148 uracil-DNA glycosylase
BVU_4101 A/G-specific adenine glycosylase
BVU_2241 endonuclease III
BVU_2322 conserved hypothetical protein
BVU_1409 deoxyuridine 5'-triphosphate nucleotidohydrolase
BVU_0852 DNA-3-methyladenine glycosylase I
BVU_2613 exodeoxyribonuclease
BVU_2436 endonuclease IV
BVU_2071 putative single-stranded-DNA-specific exonuclease
BVU_3306 DNA ligase
BVU_1207 DNA polymerase I
BVU_3046 excinuclease ABC subunit A
BVU_0083 UvrABC SOS-repair system protein excinuclease A
BVU_3040 UvrABC SOS-repair system protein B
BVU_1212 excinuclease ABC subunit C
BVU_3538 putative helicase
BVU_3010 conserved hypothetical protein
BVU_0813 DNA-directed RNA polymerase beta chain
BVU_0812 DNA-directed RNA polymerase beta' chain
BVU_0780 DNA-directed RNA polymerase alpha chain
BVU_2270 transcription-repair coupling factor
BVU_1195 putative DNA mismatch repair protein MutS
BVU_2450 DNA mismatch repair protein MutS
BVU_0422 DNA mismatch repair protein mutL
BVU_0271 putative exodeoxyribonuclease VII large subunit
BVU_0270 conserved hypothetical protein
BVU_1885 DNA polymerase III alpha subunit
BVU_2894 DNA polymerase III, beta chain
BVU_3312 conserved hypothetical protein
BVU_1829 putative DNA polymerase III, delta subunit
BVU_3037 putative exonuclease/DNA polymerase III epsilon c
BVU_2893 DNA Pol III epsilon chain
BVU_2249 putative DNA polymerase III
BVU_4100 single-strand binding protein
BVU_2859 single-strand DNA-binding protein
BVU_3409 ATP-dependent exonuclease V, alpha subunit - helicase superfamily I member
BVU_2377 RecA
BVU_1658 Holliday junction DNA helicase ruvA
BVU_1289 Holliday junction DNA helicase RuvB
BVU_3033 crossover junction endodeoxyribonuclease RuvC
BVU_1471 putative primosomal protein N'
BVU_0486 ATP-dependent exonuclease sbcC
BVU_0487 putative exonuclease
BVU_2049 putative DNA repair protein
BVU_2620 DNA replication and repair protein RecF
BVU_0471 ATP-dependent DNA helicase RecG
BVU_3429 transcriptional regulator
BVU_2385 conserved hypothetical protein
BVU_1498 conserved hypothetical protein
BVU_3743 conserved hypothetical protein
BVU_1391 DNA repair protein
BVU_2971 recombination protein recR
BVU_2891 DNA repair protein recN
BVU_2855 putative ATP-dependent helicase
BVU_3298 DNA gyrase A subunit
BVU_1388 DNA gyrase B subunit
BVU_1335 DNA topoisomerase I
BVU_3428 DNA-binding protein HU
BVU_4102 DNA-binding protein HU
BVU_0996 DNA-binding protein HU-beta
BVU_3283 DNA-binding protein HU
BVU_2013 putative ATP-dependent DNA helicase
BVU_0442 ATP-dependent DNA helicase recQ
BVU_2070 ATP-dependent DNA helicase RecQ
BVU_2638 ATP-dependent DNA helicase
BVU_1897 DNA damage-inducible protein
BVU_3423 putative SOS-response transcriptional repressor
BVU_1220 conserved hypothetical protein
BVU_0862 putative regulatory protein
BVU_3098 ribonucleoside-diphosphate reductase subunit A
BVU_0003 putative ribonucleoside reductase
BVU_3097 ribonucleoside-diphosphate reductase subunit B
BVU_0048 putative exopolyphosphatase-related protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K19789 radD; DNA repair protein RadD
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K14623 dinD; DNA-damage-inducible protein D
K03565 recX; regulatory protein
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:bvu03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Phocaeicola vulgatus