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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ccr03030]
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03410 Base excision repair [PATH:ccr03410]
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 CC_3731 endonuclease III
CC_2272 endonuclease III family protein
CC_0377 A/G-specific adenine glycosylase
CC_3707 formamidopyrimidine-DNA glycosylase
CC_2201 DNA-3-methyladenine glycosylase, putative
CC_0382 DNA-3-methyladenine glycosylase I
CC_1549 conserved hypothetical protein
CC_2333 phage SPO1 DNA polymerase-related protein
CC_1333 phage SPO1 DNA polymerase-related protein
CC_3706 exodeoxyribonuclease III
CC_2011 exodeoxyribonuclease III
CC_3464 DNA polymerase I
CC_1386 single-stranded-DNA-specific exonuclease RecJ
CC_1522 DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:ccr03420]
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03430 Mismatch repair [PATH:ccr03430]
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03440 Homologous recombination [PATH:ccr03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ccr03000]
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03021 Transcription machinery [BR:ccr03021]
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03019 Messenger RNA biogenesis [BR:ccr03019]
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03041 Spliceosome
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03011 Ribosome [BR:ccr03011]
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03009 Ribosome biogenesis [BR:ccr03009]
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03016 Transfer RNA biogenesis [BR:ccr03016]
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03012 Translation factors [BR:ccr03012]
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03110 Chaperones and folding catalysts [BR:ccr03110]
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04131 Membrane trafficking [BR:ccr04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:ccr03032]
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03036 Chromosome and associated proteins [BR:ccr03036]
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03400 DNA repair and recombination proteins [BR:ccr03400]
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CC_0659 methylated-DNA--protein-cysteine methyltransferase
CC_0689 methylated-DNA--protein-cysteine methyltransferase
CC_1428 deoxyribodipyrimidine photolyase - classI
CC_0377 A/G-specific adenine glycosylase
CC_3731 endonuclease III
CC_2272 endonuclease III family protein
CC_0833 mutator mutT protein
CC_3382 MutT/nudix family protein
CC_1126 MutT/nudix family protein
CC_1346 MutT/nudix family protein
CC_3713 deoxyuridine 5'-triphosphate nucleotidohydrolase
CC_3729 ada regulatory protein
CC_0646 conserved hypothetical protein
CC_0009 DNA alkylation damage repair protein AlkB
CC_1549 conserved hypothetical protein
CC_2333 phage SPO1 DNA polymerase-related protein
CC_1333 phage SPO1 DNA polymerase-related protein
CC_2201 DNA-3-methyladenine glycosylase, putative
CC_0382 DNA-3-methyladenine glycosylase I
CC_3707 formamidopyrimidine-DNA glycosylase
CC_3706 exodeoxyribonuclease III
CC_2011 exodeoxyribonuclease III
CC_1386 single-stranded-DNA-specific exonuclease RecJ
CC_1522 DNA ligase, NAD-dependent
CC_3464 DNA polymerase I
CC_2590 excinuclease ABC, subunit A
CC_2981 excinuclease ABC, subunit B
CC_2881 excinuclease ABC, subunit C
CC_1528 DNA helicase II
CC_0502 DNA-directed RNA polymerase, beta subunit
CC_0503 DNA-directed RNA polymerase, beta' subunit
CC_1272 DNA-directed RNA polymerase, alpha subunit
CC_1552 DNA-directed RNA polymerase, omega subunit
CC_1844 transcription-repair coupling factor
CC_0012 DNA mismatch repair protein MutS
CC_0695 DNA mismatch repair protein MutL
CC_2246 exodeoxyribonuclease large subunit
CC_2070 exodeoxyribonuclease small subunit
CC_1926 DNA polymerase III, alpha subunit
CC_0156 DNA polymerase III, beta subunit
CC_1693 DNA polymerase III, chi subunit, putative
CC_3751 hypothetical protein
CC_1823 DNA polymerase III, delta prime subunit
CC_0005 DNA polymerase III, epsilon subunit
CC_1523 exonuclease
CC_0267 DNA polymerase III, gamma and tau subunits
CC_1468 single-strand binding protein
CC_3624 patch repair protein
CC_1087 recA protein
CC_3237 Holliday junction DNA helicase RuvA
CC_3236 Holliday junction DNA helicase RuvB
CC_3238 Holliday junction resolvase
CC_0346 primosomal protein N'
CC_1660 DNA repair protein RadA
CC_0159 recF protein
CC_1437 ATP-dependent DNA helicase RecG
CC_1564 conserved hypothetical protein
CC_0269 recombination protein RecR
CC_1983 DNA repair protein RecN
CC_3538 helicase, UvrD/Rep family
CC_3537 hypothetical protein
CC_0090 conserved hypothetical protein
CC_1580 DNA gyrase subunit A
CC_0160 DNA gyrase subunit B
CC_2451 DNA topoisomerase I
CC_2331 DNA-binding protein HU
CC_1959 DNA-binding protein HU
CC_1370 integration host factor alpha-subunit
CC_3586 integration host factor beta subunit
CC_3465 ATP-dependent DNA helicase RecQ
CC_2466 DNA-damage-inducible protein P
CC_1902 repressor LexA
CC_3213 hypothetical protein
CC_3212 hypothetical protein
CC_3211 DNA polymerase III, alpha subunit, putative
CC_2038 hypothetical protein
CC_2040 ATP-dependent RNA helicase, DEAD/DEAH family
CC_3492 ribonucleoside-diphosphate reductase, alpha subunit
CC_1889 ribonucleotide reductase-related protein
CC_0260 ribonucleoside-diphosphate reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:ccr03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Caulobacter vibrioides CB15