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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:cpsb03030]
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03410 Base excision repair [PATH:cpsb03410]
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03420 Nucleotide excision repair [PATH:cpsb03420]
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03430 Mismatch repair [PATH:cpsb03430]
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03440 Homologous recombination [PATH:cpsb03440]
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 B595_0209 recJ; single-stranded-DNA-specific exonuclease RecJ
B595_0474 ssb; single-strand binding family protein
B595_0518 recF; DNA replication and repair RecF family protein
B595_0177 recO; DNA repair protein RecO
B595_0560 recR; recombination protein RecR
B595_1142 recA; protein RecA
B595_0139 ruvA; holliday junction DNA helicase RuvA
B595_0469 ruvB; holliday junction DNA helicase RuvB
B595_0138 ruvC; crossover junction endodeoxyribonuclease RuvC
B595_0010 recB; exodeoxyribonuclease V, beta subunit
B595_0011 recC; exodeoxyribonuclease V gamma chain
B595_1152 recD; exodeoxyribonuclease V, alpha subunit
B595_0751 recD_1; exodeoxyribonuclease V alpha chain
B595_0090 dnaE; DNA polymerase III, alpha subunit
B595_0519 dnaN; DNA polymerase III, beta subunit
B595_0591 dnaX_1; DNA polymerase III subunit gamma/tau
B595_0388 dnaX; DNA polymerase III, subunits gamma and tau
B595_0477 DNA polymerase III, delta subunit
B595_0443 exonuclease, DNA polymerase III, epsilon subunit family domain protein
B595_0102 exonuclease, DNA polymerase III, epsilon subunit family domain protein
B595_0961 priA; primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:cpsb03000]
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03021 Transcription machinery [BR:cpsb03021]
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03019 Messenger RNA biogenesis [BR:cpsb03019]
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03041 Spliceosome
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03011 Ribosome [BR:cpsb03011]
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03009 Ribosome biogenesis [BR:cpsb03009]
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03016 Transfer RNA biogenesis [BR:cpsb03016]
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03012 Translation factors [BR:cpsb03012]
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03110 Chaperones and folding catalysts [BR:cpsb03110]
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04131 Membrane trafficking [BR:cpsb04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:cpsb03032]
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03036 Chromosome and associated proteins [BR:cpsb03036]
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03400 DNA repair and recombination proteins [BR:cpsb03400]
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B595_0169 methylated-DNA-[]-cysteine S-methyltransferase family protein
B595_1130 ung; uracil-DNA glycosylase
B595_0274 DNA-3-methyladenine glycosylase family protein
B595_0451 A/G-specific adenine glycosylase
B595_1064 hhH-GPD superbase excision DNA repair family protein
B595_0400 dut; dUTP diphosphatase family protein
B595_0016 apurinic endonuclease family protein
B595_0209 recJ; single-stranded-DNA-specific exonuclease RecJ
B595_0714 ligA; DNA ligase, NAD-dependent
B595_0780 ABC transporter family protein
B595_0781 ABC transporter family protein
B595_1103 uvrB; excinuclease ABC, B subunit
B595_0951 uvrC; excinuclease ABC, C subunit
B595_1131 pcrA; ATP-dependent DNA helicase pcrA
B595_0796 rpoB; DNA-directed RNA polymerase, beta subunit
B595_0795 rpoC; DNA-directed RNA polymerase, beta' subunit
B595_0132 rpoA; DNA-directed RNA polymerase, alpha subunit
B595_1001 mfd; transcription-repair coupling factor
B595_0950 mutS; DNA mismatch repair protein MutS
B595_1087 mutL; DNA mismatch repair MutL family protein
B595_0358 exonuclease VII, large subunit
B595_0357 exonuclease VII small subunit
B595_0090 dnaE; DNA polymerase III, alpha subunit
B595_0519 dnaN; DNA polymerase III, beta subunit
B595_0477 DNA polymerase III, delta subunit
B595_0443 exonuclease, DNA polymerase III, epsilon subunit family domain protein
B595_0102 exonuclease, DNA polymerase III, epsilon subunit family domain protein
B595_0591 dnaX_1; DNA polymerase III subunit gamma/tau
B595_0388 dnaX; DNA polymerase III, subunits gamma and tau
B595_0474 ssb; single-strand binding family protein
B595_0010 recB; exodeoxyribonuclease V, beta subunit
B595_0011 recC; exodeoxyribonuclease V gamma chain
B595_1152 recD; exodeoxyribonuclease V, alpha subunit
B595_0751 recD_1; exodeoxyribonuclease V alpha chain
B595_1142 recA; protein RecA
B595_0139 ruvA; holliday junction DNA helicase RuvA
B595_0469 ruvB; holliday junction DNA helicase RuvB
B595_0138 ruvC; crossover junction endodeoxyribonuclease RuvC
B595_0961 priA; primosomal protein N'
B595_0394 radA; DNA repair protein RadA
B595_0518 recF; DNA replication and repair RecF family protein
B595_0177 recO; DNA repair protein RecO
B595_0560 recR; recombination protein RecR
B595_0588 gyrA; DNA gyrase, A subunit
B595_0034 DNA gyrase/topoisomerase IV, subunit A family protein
B595_0587 gyrB; DNA gyrase, B subunit
B595_0035 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
B595_1134 topA; DNA topoisomerase I
B595_0435 bacterial DNA-binding family protein
B595_0891 ribonucleoside-diphosphate reductase, alpha subunit
B595_0890 ribonucleotide reductase, small chain family protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05788 ihfB; integration host factor subunit beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:cpsb03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Chlamydia psittaci 84/55