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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:cyj03030]
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03410 Base excision repair [PATH:cyj03410]
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03420 Nucleotide excision repair [PATH:cyj03420]
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03430 Mismatch repair [PATH:cyj03430]
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03440 Homologous recombination [PATH:cyj03440]
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 Cyan7822_3165 single-stranded-DNA-specific exonuclease RecJ
Cyan7822_3108 single-stranded-DNA-specific exonuclease RecJ
Cyan7822_4308 single-strand binding protein
Cyan7822_6305 single-strand binding protein
Cyan7822_6871 single-strand binding protein
Cyan7822_6942 single-strand binding protein
Cyan7822_0183 DNA replication and repair protein RecF
Cyan7822_2201 DNA repair protein RecO
Cyan7822_1713 recombination protein RecR
Cyan7822_1435 recA protein
Cyan7822_3643 Holliday junction DNA helicase RuvA
Cyan7822_5408 Holliday junction DNA helicase RuvB
Cyan7822_0385 Crossover junction endodeoxyribonuclease
Cyan7822_1053 Holliday junction resolvasome endonuclease subunit-like protein
Cyan7822_1231 ATP-dependent DNA helicase RecG
Cyan7822_0523 helicase, RecD/TraA family
Cyan7822_4329 DNA polymerase III, alpha subunit
Cyan7822_2589 nucleic acid binding OB-fold tRNA/helicase-type
Cyan7822_2379 DNA polymerase III, beta subunit
Cyan7822_6081 DNA polymerase III, beta subunit
Cyan7822_6315 DNA polymerase III, beta subunit
Cyan7822_3601 DNA polymerase III, subunits gamma and tau
Cyan7822_6314 DNA polymerase III, subunits gamma and tau
Cyan7822_1292 DNA polymerase III, delta subunit
Cyan7822_6313 DNA polymerase III, delta subunit
Cyan7822_4007 DNA polymerase III, delta prime subunit
Cyan7822_6312 DNA polymerase III subunit delta'
Cyan7822_6739 Exonuclease RNase T and DNA polymerase III
Cyan7822_4698 Exonuclease RNase T and DNA polymerase III
Cyan7822_6899 Exonuclease RNase T and DNA polymerase III
Cyan7822_3624 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:cyj03000]
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03021 Transcription machinery [BR:cyj03021]
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03019 Messenger RNA biogenesis [BR:cyj03019]
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03041 Spliceosome [BR:cyj03041]
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03011 Ribosome [BR:cyj03011]
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03009 Ribosome biogenesis [BR:cyj03009]
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03016 Transfer RNA biogenesis [BR:cyj03016]
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03012 Translation factors [BR:cyj03012]
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03110 Chaperones and folding catalysts [BR:cyj03110]
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04131 Membrane trafficking [BR:cyj04131]
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04121 Ubiquitin system [BR:cyj04121]
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03051 Proteasome [BR:cyj03051]
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03032 DNA replication proteins [BR:cyj03032]
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03036 Chromosome and associated proteins [BR:cyj03036]
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03400 DNA repair and recombination proteins [BR:cyj03400]
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Cyan7822_1545 Deoxyribodipyrimidine photo-lyase
Cyan7822_1404 A/G-specific adenine glycosylase
Cyan7822_0360 endonuclease III
Cyan7822_4196 NUDIX hydrolase
Cyan7822_3112 NUDIX hydrolase
Cyan7822_1728 NUDIX hydrolase
Cyan7822_1735 NUDIX hydrolase
Cyan7822_1035 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Cyan7822_5275 Uracil-DNA glycosylase superfamily
Cyan7822_3969 HhH-GPD family protein
Cyan7822_4984 formamidopyrimidine-DNA glycosylase
Cyan7822_3971 exodeoxyribonuclease III
Cyan7822_3824 Deoxyribonuclease V
Cyan7822_3165 single-stranded-DNA-specific exonuclease RecJ
Cyan7822_3108 single-stranded-DNA-specific exonuclease RecJ
Cyan7822_3109 DNA ligase, NAD-dependent
Cyan7822_2431 excinuclease ABC, A subunit
Cyan7822_3190 excinuclease ABC, B subunit
Cyan7822_5406 excinuclease ABC, C subunit
Cyan7822_2745 UvrD/REP helicase
Cyan7822_2774 ATP-dependent DNA helicase PcrA
Cyan7822_1032 UvrD/REP helicase
Cyan7822_4571 UvrD/REP helicase
Cyan7822_3833 UvrD/REP helicase
Cyan7822_5324 DNA-directed RNA polymerase, beta subunit
Cyan7822_5323 DNA-directed RNA polymerase, beta'' subunit
Cyan7822_4769 DNA-directed RNA polymerase, gamma subunit
Cyan7822_5040 DNA-directed RNA polymerase, alpha subunit
Cyan7822_3185 DNA-directed RNA polymerase, omega subunit
Cyan7822_5030 transcription-repair coupling factor
Cyan7822_2218 DNA mismatch repair protein MutS
Cyan7822_2588 MutS2 family protein
Cyan7822_0148 DNA mismatch repair protein MutL
Cyan7822_2936 exodeoxyribonuclease VII, large subunit
Cyan7822_2937 Exonuclease VII small subunit
Cyan7822_4329 DNA polymerase III, alpha subunit
Cyan7822_2589 nucleic acid binding OB-fold tRNA/helicase-type
Cyan7822_2379 DNA polymerase III, beta subunit
Cyan7822_6081 DNA polymerase III, beta subunit
Cyan7822_6315 DNA polymerase III, beta subunit
Cyan7822_1292 DNA polymerase III, delta subunit
Cyan7822_6313 DNA polymerase III, delta subunit
Cyan7822_4007 DNA polymerase III, delta prime subunit
Cyan7822_6312 DNA polymerase III subunit delta'
Cyan7822_6739 Exonuclease RNase T and DNA polymerase III
Cyan7822_4698 Exonuclease RNase T and DNA polymerase III
Cyan7822_6899 Exonuclease RNase T and DNA polymerase III
Cyan7822_3601 DNA polymerase III, subunits gamma and tau
Cyan7822_6314 DNA polymerase III, subunits gamma and tau
Cyan7822_4308 single-strand binding protein
Cyan7822_6305 single-strand binding protein
Cyan7822_6871 single-strand binding protein
Cyan7822_6942 single-strand binding protein
Cyan7822_0111 D12 class N6 adenine-specific DNA methyltransferase
Cyan7822_1616 DNA adenine methylase
Cyan7822_0523 helicase, RecD/TraA family
Cyan7822_1435 recA protein
Cyan7822_3643 Holliday junction DNA helicase RuvA
Cyan7822_5408 Holliday junction DNA helicase RuvB
Cyan7822_0385 Crossover junction endodeoxyribonuclease
Cyan7822_1053 Holliday junction resolvasome endonuclease subunit-like protein
Cyan7822_3624 primosomal protein N'
Cyan7822_1142 exonuclease SbcC
Cyan7822_2445 nuclease SbcCD, D subunit
Cyan7822_0011 DNA repair protein RadA
Cyan7822_0183 DNA replication and repair protein RecF
Cyan7822_1231 ATP-dependent DNA helicase RecG
Cyan7822_2201 DNA repair protein RecO
Cyan7822_1713 recombination protein RecR
Cyan7822_3631 DNA repair protein RecN
Cyan7822_5629 CRISPR-associated protein Cas1
Cyan7822_5931 CRISPR-associated protein Cas1
Cyan7822_6172 CRISPR-associated protein Cas1
Cyan7822_6411 CRISPR-associated protein Cas1
Cyan7822_4603 DNA topoisomerase (ATP-hydrolyzing)
Cyan7822_1999 DNA gyrase, A subunit
Cyan7822_4937 DNA gyrase, B subunit
Cyan7822_0107 DNA topoisomerase I
Cyan7822_0464 DNA topoisomerase I
Cyan7822_1041 histone family protein DNA-binding protein
Cyan7822_2865 ATP-dependent DNA helicase, RecQ family
Cyan7822_2732 ATP-dependent DNA helicase, RecQ family
Cyan7822_1449 transcriptional repressor, LexA family
Cyan7822_6616 transcriptional repressor, LexA family
Cyan7822_6781 transcriptional repressor, LexA family
Cyan7822_6923 transcriptional repressor, LexA family
Cyan7822_0162 Rad3-related DNA helicase-like protein
Cyan7822_1445 ribonucleoside-diphosphate reductase, alpha subunit
Cyan7822_1447 ribonucleotide reductase
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:cyj03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Gloeothece verrucosa