Messenger RNA Biogenesis - Danio rerio (zebrafish)

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     KO
 Eukaryotic type
   mRNA processing factors
   mRNA surveillance and transport factors
     Transport factors
       EJC complex
       TREX complex
       TREX-2 complex
       Nuclear pore complex
         558883 tprb; translocated promoter region b, nuclear basket protein
         571089 tpra; nucleoprotein TPR isoform X1
         393973 rae1; mRNA export factor
         798071 sec13; protein SEC13 homolog
         436892 nup37; nucleoporin Nup37
         445231 nup85; nuclear pore complex protein Nup85
         405828 nup43; nucleoporin Nup43
         322969 nup50; nuclear pore complex protein Nup50
         335750 nup54; nucleoporin p54
         563392 nup62l; nucleoporin 62 like
         321744 nup88; nucleoporin 88
         30172 nup93; nuclear pore complex protein Nup93
         777756 nup98; nuclear pore complex protein Nup98-Nup96
         562350 nup107; nuclear pore complex protein Nup107
         406852 nup133; nuclear pore complex protein Nup133
         559225 nup188; nucleoporin NUP188 homolog
         571621 nup153; nuclear pore complex protein Nup153
         393125 nup155; nuclear pore complex protein Nup155
         393635 nup160; nuclear pore complex protein Nup160
         337461 nup35; nucleoporin NUP35
         445382 nup205; nuclear pore complex protein Nup205
         570945 nup210; nuclear pore membrane glycoprotein 210
         100529857 nup214; nuclear pore complex protein Nup214
         568298 pom121; nuclear envelope pore membrane protein POM 121
         406510 nup58; nucleoporin p58/p45
         406491 nup42; nucleoporin NUP42
         335236 ndc1; nucleoporin NDC1
         334749 seh1l; nucleoporin SEH1
         100317326 si:ch1073-55a19.2; E3 SUMO-protein ligase RanBP2 isoform X3
         556400 senp2; sentrin-specific protease 2
         378454 aaas; aladin
         552931 cetn3; centrin-3
         445408 gle1; mRNA export factor GLE1
         323865 nxf1; nuclear RNA export factor 1
         751719 nxf1a; uncharacterized protein LOC751719
         751738 nxt2; NTF2-related export protein 2
K09291 TPR; nucleoprotein TPR 
K09291 TPR; nucleoprotein TPR 
K14298 RAE1; mRNA export factor 
K14004 SEC13; protein transport protein SEC13 
K14302 NUP37; nuclear pore complex protein Nup37 
K14304 NUP85; nuclear pore complex protein Nup85 
K14305 NUP43; nuclear pore complex protein Nup43 
K14295 NUP50; nuclear pore complex protein Nup50 
K14308 NUP54; nuclear pore complex protein Nup54 
K14306 NUP62; nuclear pore complex protein Nup62 
K14318 NUP88; nuclear pore complex protein Nup88 
K14309 NUP93; nuclear pore complex protein Nup93 
K14297 NUP98; nuclear pore complex protein Nup98-Nup96 
K14301 NUP107; nuclear pore complex protein Nup107 
K14300 NUP133; nuclear pore complex protein Nup133 
K14311 NUP188; nuclear pore complex protein Nup188 
K14296 NUP153; nuclear pore complex protein Nup153 
K14312 NUP155; nuclear pore complex protein Nup155 
K14303 NUP160; nuclear pore complex protein Nup160 
K14313 NUP35; nuclear pore complex protein Nup53 
K14310 NUP205; nuclear pore complex protein Nup205 
K14314 NUP210; nuclear pore complex protein Nup210 
K14317 NUP214; nuclear pore complex protein Nup214 
K14316 POM121; nuclear pore complex protein Nup121 
K14307 NUPL1; nucleoporin p58/p45 
K14321 NUPL2; nucleoporin-like protein 2 
K14315 NDC1; nucleoporin NDC1 
K14299 SEH1; nucleoporin SEH1 
K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-] 
K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68] 
K14320 AAAS; aladin 
K16466 CETN3; centrin-3 
K18723 GLE1; nucleoporin GLE1 
K14284 NXF; nuclear RNA export factor 
K14284 NXF; nuclear RNA export factor 
K14285 NXT1_2; NTF2-related export protein 1/2 
       Ran-mediated transport factors
       eIF4F and regulatory proteins
       APOBEC1-ACF complex
       Other transport factors
     Surveillance factors
     Factors involved in mRNA localization
     mRNA cycle factors
   mRNA degradation factors
 
 Prokaryotic type

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Last updated: April 25, 2024