EcDH1_3973 aspartate kinase
       EcDH1_3594 aspartate kinase
       EcDH1_4045 aspartate kinase
       EcDH1_0281 aspartate-semialdehyde dehydrogenase
       EcDH1_1191 dihydrodipicolinate synthase
       EcDH1_3568 Dihydrodipicolinate reductase
       EcDH1_3437 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
       EcDH1_0353 succinylornithine transaminase family
       EcDH1_1198 succinyl-diaminopimelate desuccinylase
       EcDH1_4170 Diaminopimelate epimerase
       EcDH1_0852 diaminopimelate decarboxylase
       EcDH1_3515 UDP-N-acetylmuramyl-tripeptide synthetase
       EcDH1_3514 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase

K00928 lysC; aspartate kinase [EC:2.7.2.4]
K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]

       EcDH1_3572 lipoprotein signal peptidase
       EcDH1_0724 Acid phosphatase
       EcDH1_0378 peptidase A24A prepilin type IV
       EcDH1_3064 Plasminogen activator Pla
       EcDH1_2669 hydrogenase expression/formation protein
       EcDH1_0703 hydrogenase expression/formation protein
       EcDH1_0972 hydrogenase maturation protease HycI
       EcDH1_1161 GMP synthase, large subunit
       EcDH1_2348 peptidase C26
       EcDH1_1482 NLP/P60 protein
       EcDH1_1985 NLP/P60 protein
       EcDH1_1934 NLP/P60 protein
       EcDH1_1344 amidophosphoribosyltransferase
       EcDH1_0495 Glutamate synthase (ferredoxin)
       EcDH1_4238 glucosamine/fructose-6-phosphate aminotransferase, isomerizing
       EcDH1_2963 asparagine synthase (glutamine-hydrolyzing)
       EcDH1_1684 ThiJ/PfpI domain protein
       EcDH1_0552 intracellular protease, PfpI family
       EcDH1_3185 DJ-1 family protein
       EcDH1_1388 peptidase C48 SUMO/Sentrin/Ubl1
       EcDH1_1666 ErfK/YbiS/YcfS/YnhG family protein
       EcDH1_1964 ErfK/YbiS/YcfS/YnhG family protein
       EcDH1_2823 ErfK/YbiS/YcfS/YnhG family protein
       EcDH1_2534 ErfK/YbiS/YcfS/YnhG family protein
       EcDH1_2718 ErfK/YbiS/YcfS/YnhG family protein
       EcDH1_2711 aminopeptidase N
       EcDH1_0217 Oligopeptidase A
       EcDH1_2107 Peptidyl-dipeptidase Dcp
       EcDH1_2159 peptidase M15D vanX D-ala-D-ala dipeptidase
       EcDH1_0870 peptidase M16 domain protein
       EcDH1_2152 peptidase M16 domain protein
       EcDH1_3737 Leucyl aminopeptidase
       EcDH1_1145 PepB aminopeptidase
       EcDH1_1198 succinyl-diaminopimelate desuccinylase
       EcDH1_2520 peptidase T
       EcDH1_3370 aminoacyl-histidine dipeptidase
       EcDH1_2306 amidohydrolase
       EcDH1_2307 amidohydrolase
       EcDH1_3097 allantoate amidohydrolase
       EcDH1_1784 Peptidase M23
       EcDH1_3435 methionine aminopeptidase, type I
       EcDH1_4134 peptidase M24
       EcDH1_0784 peptidase M24
       EcDH1_1272 peptidase M24
       EcDH1_0935 peptidase M28
       EcDH1_3668 isoaspartyl dipeptidase
       EcDH1_0529 ATP-dependent metalloprotease FtsH
       EcDH1_4086 Cellulase
       EcDH1_3694 peptidase M42 family protein
       EcDH1_1813 HtpX domain protein
       EcDH1_2734 peptidase M48 Ste24p
       EcDH1_0758 peptidase M48 Ste24p
       EcDH1_1175 peptidase M48 Ste24p
       EcDH1_3427 membrane-associated zinc metalloprotease
       EcDH1_1328 peptidase U6 penicillin-insensitive murein endopeptidase
       EcDH1_1676 protein of unknown function DUF980
       EcDH1_2045 peptidase S1 and S6 chymotrypsin/Hap
       EcDH1_3441 protease Do
       EcDH1_0472 protease Do
       EcDH1_0471 periplasmic serine protease DegS
       EcDH1_1797 Oligopeptidase B
       EcDH1_2803 Serine-type D-Ala-D-Ala carboxypeptidase
       EcDH1_1647 Serine-type D-Ala-D-Ala carboxypeptidase
       EcDH1_2994 Serine-type D-Ala-D-Ala carboxypeptidase
       EcDH1_1523 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
       EcDH1_3233 beta-lactamase
       EcDH1_1231 beta-lactamase
       EcDH1_0525 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
       EcDH1_3172 ATP-dependent Clp protease, proteolytic subunit ClpP
       EcDH1_3170 ATP-dependent protease La
       EcDH1_2688 putative ATP-dependent protease
       EcDH1_3950 SOS-response transcriptional repressor, LexA
       EcDH1_2465 peptidase S24 and S26 domain protein
       EcDH1_1100 signal peptidase I
       EcDH1_1812 carboxyl-terminal protease
       EcDH1_1876 signal peptide peptidase SppA, 67K type
       EcDH1_2377 Peptidase S49 domain protein
       EcDH1_3976 Dipeptidase E
       EcDH1_0290 Rhomboid family protein
       EcDH1_2456 Muramoyltetrapeptide carboxypeptidase
       EcDH1_4053 20S proteasome A and B subunits
       EcDH1_2814 peptidase T2 asparaginase 2
       EcDH1_0268 gamma-glutamyltransferase
       EcDH1_1575 peptidase U32
       EcDH1_2211 peptidase U32
       EcDH1_0546 peptidase U32
       EcDH1_0547 peptidase U32
       EcDH1_3759 peptidase U62 modulator of DNA gyrase
       EcDH1_0462 peptidase U62 modulator of DNA gyrase
       EcDH1_1449 proteinase inhibitor I11 ecotin
       EcDH1_1148 alpha-2-macroglobulin domain protein
       EcDH1_3818 HflC protein
       EcDH1_3819 HflK protein

K03101 lspA; signal peptidase II [EC:3.4.23.36]
K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
K01355 ompT; omptin [EC:3.4.23.49]
K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K09473 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase [EC:3.5.1.94]
K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
K13695 nlpC; probable lipoprotein NlpC
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
K05520 yhbO; deglycase [EC:3.5.1.124]
K03152 thiJ; protein deglycase [EC:3.5.1.124]
K18015 elaD; deubiquitinase [EC:3.4.22.-]
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K19234 ynhG; L,D-transpeptidase YnhG
K19235 ybiS; L,D-transpeptidase YbiS
K19236 ycfS; L,D-transpeptidase YcfS
K21470 ycbB; L,D-transpeptidase YcbB
K01256 pepN; aminopeptidase N [EC:3.4.11.2]
K01414 prlC; oligopeptidase A [EC:3.4.24.70]
K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
K01407 ptrA; protease III [EC:3.4.24.55]
K07263 pqqL; zinc protease [EC:3.4.24.-]
K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
K01270 pepD; dipeptidase D [EC:3.4.13.-]
K12940 abgA; aminobenzoyl-glutamate utilization protein A
K12941 abgB; aminobenzoyl-glutamate utilization protein B
K02083 allC; allantoate deiminase [EC:3.5.3.9]
K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
K08326 ypdF; aminopeptidase [EC:3.4.11.-]
K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
K18530 frvX; putative aminopeptidase FrvX [EC:3.4.11.-]
K20609 sgcX; putative aminopeptidase [EC:3.4.11.-]
K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
K07387 K07387; metalloprotease [EC:3.4.24.-]
K07387 K07387; metalloprotease [EC:3.4.24.-]
K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
K09933 mtfA; MtfA peptidase
K04775 ydgD; protease YdgD [EC:3.4.21.-]
K04771 degP; serine protease Do [EC:3.4.21.107]
K04772 degQ; serine protease DegQ [EC:3.4.21.-]
K04691 hhoB; serine protease DegS [EC:3.4.21.-]
K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03100 lepB; signal peptidase I [EC:3.4.21.89]
K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
K04773 sppA; protease IV [EC:3.4.21.-]
K04774 sohB; serine protease SohB [EC:3.4.21.-]
K05995 pepE; dipeptidase E [EC:3.4.13.21]
K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K08303 prtC; U32 family peptidase [EC:3.4.-.-]
K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
K03592 pmbA; PmbA protein
K03568 tldD; TldD protein
K08276 eco; ecotin
K06894 yfhM; alpha-2-macroglobulin
K04087 hflC; modulator of FtsH protease HflC
K04088 hflK; modulator of FtsH protease HflK