O3O_18370 thiosulfate transporter subunit
       O3O_01060 sulfate transporter subunit
       O3O_18365 sulfate/thiosulfate transporter subunit
       O3O_18360 cysW; sulfate/thiosulfate transporter permease subunit
       O3O_18355 sulfate/thiosulfate transporter subunit
       O3O_05630 tauA; taurine transporter substrate binding subunit
       O3O_05640 taurine transporter subunit
       O3O_05635 tauB; taurine transporter ATP-binding subunit
       O3O_05645 tauD; taurine dioxygenase
       O3O_08635 alkanesulfonate transporter substrate-binding subunit
       O3O_08625 ssuC; alkanesulfonate transporter permease subunit
       O3O_08620 ssuB; aliphatic sulfonates transport ATP-binding subunit
       O3O_08630 alkanesulfonate monooxygenase
       O3O_08640 NAD(P)H-dependent FMN reductase
       O3O_19875 cysN; sulfate adenylyltransferase subunit 1
       O3O_19880 sulfate adenylyltransferase subunit 2
       O3O_19870 adenylylsulfate kinase
       O3O_02825 adenosine-3'(2'),5'-bisphosphate nucleotidase
       O3O_19940 phosphoadenosine phosphosulfate reductase
       O3O_19950 cysJ; sulfite reductase subunit alpha
       O3O_19945 sulfite reductase subunit beta
       O3O_13750 thiosulfate reductase cytochrome B subunit
       O3O_18840 sseA; 3-mercaptopyruvate sulfurtransferase
       O3O_23710 glpE; thiosulfate sulfurtransferase
       O3O_24880 cysE; serine acetyltransferase
       O3O_18320 cysteine synthase A
       O3O_01530 homoserine O-succinyltransferase
       O3O_01205 cystathionine gamma-synthase
       O3O_08410 anaerobic dimethyl sulfoxide reductase subunit A
       O3O_08415 anaerobic dimethyl sulfoxide reductase chain B
       O3O_08420 dimethyl sulfoxide reductase, anaerobic subunit C

K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
K02046 cysU; sulfate/thiosulfate transport system permease protein
K02047 cysW; sulfate/thiosulfate transport system permease protein
K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
K15551 tauA; taurine transport system substrate-binding protein
K15552 tauC; taurine transport system permease protein
K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
K15553 ssuA; sulfonate transport system substrate-binding protein
K15554 ssuC; sulfonate transport system permease protein
K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
K00299 ssuE; FMN reductase [EC:1.5.1.38]
K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
K08354 phsC; thiosulfate reductase cytochrome b subunit
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C

       O3O_17490 ribonuclease Z
       O3O_21975 cca; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase
       O3O_23690 hypothetical protein
       O3O_18260 gltX; glutamyl-tRNA synthetase
       O3O_04795 prolyl-tRNA synthetase
       O3O_03965 ileS; isoleucyl-tRNA synthetase
       O3O_06915 leuS; leucyl-tRNA synthetase
       O3O_16760 metG; methionyl-tRNA synthetase
       O3O_07055 glutaminyl-tRNA synthetase
       O3O_15405 argS; arginyl-tRNA synthetase
       O3O_20630 lysS; lysyl-tRNA synthetase
       O3O_02135 lysyl-tRNA synthetase
       O3O_15025 aspS; aspartyl-tRNA synthetase
       O3O_19550 alaS; alanyl-tRNA synthetase
       O3O_08605 asnC; asparaginyl-tRNA synthetase
       O3O_14240 thrS; threonyl-tRNA synthetase
       O3O_08405 seryl-tRNA synthetase
       O3O_06425 cysS; cysteinyl-tRNA synthetase
       O3O_03045 valS; valyl-tRNA synthetase
       O3O_18805 hisS; histidyl-tRNA synthetase
       O3O_14220 pheS; phenylalanyl-tRNA synthetase subunit alpha
       O3O_14215 pheT; phenylalanyl-tRNA synthetase subunit beta
       O3O_13590 tyrosyl-tRNA synthetase
       O3O_23500 tryptophanyl-tRNA synthetase
       O3O_00880 D-tyrosyl-tRNA(Tyr) deacylase
       O3O_10255 purine nucleoside phosphoramidase
       O3O_21005 trmB; tRNA (guanine-N(7)-)-methyltransferase
       O3O_04800 hypothetical protein
       O3O_17730 truA; tRNA pseudouridine synthase A
       O3O_22545 truB; tRNA pseudouridine synthase B
       O3O_19845 truD; tRNA pseudouridine synthase D
       O3O_18885 cysteine desulfurase
       O3O_23060 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein
       O3O_02595 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
       O3O_00025 trmE; tRNA modification GTPase TrmE
       O3O_00225 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
       O3O_14485 selenophosphate synthetase
       O3O_02825 adenosine-3'(2'),5'-bisphosphate nucleotidase
       O3O_00010 rnpA; ribonuclease P
       O3O_13665 ribonuclease T
       O3O_25045 rph; ribonuclease PH
       O3O_06760 ribonuclease I
       O3O_11730 exoribonuclease II
       O3O_14695 ribonuclease D
       O3O_04555 2'-5' RNA ligase
       O3O_03510 RNA 2'-phosphotransferase
       O3O_03790 putative ABC transporter ATP-binding protein
       O3O_24610 glyQ; glycyl-tRNA synthetase subunit alpha
       O3O_24605 glyS; glycyl-tRNA synthetase subunit beta
       O3O_04540 glutamyl-Q tRNA(Asp) synthetase
       O3O_06210 hypothetical protein
       O3O_14600 hypothetical protein
       O3O_19030 tRNA-specific adenosine deaminase
       O3O_01745 tRNA-dihydrouridine synthase A
       O3O_22980 tRNA-dihydrouridine synthase B
       O3O_16890 tRNA-dihydrouridine synthase C
       O3O_07015 (dimethylallyl)adenosine tRNA methylthiotransferase
       O3O_15370 tRNA cmo(5)U34 methyltransferase
       O3O_15375 tRNA mo(5)U34 methyltransferase
       O3O_08545 putative S-adenosyl-L-methionine-dependent methyltransferase
       O3O_03845 putative RNA methyltransferase
       O3O_01350 tRNA (uracil-5-)-methyltransferase
       O3O_19255 trmD; tRNA (guanine-N(1)-)-methyltransferase
       O3O_19150 putative methyltransferase
       O3O_25085 tRNA guanosine-2'-O-methyltransferase
       O3O_18895 tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ
       O3O_24875 putative rRNA methylase
       O3O_19115 S-adenosyl-L-methionine-dependent methyltransferase
       O3O_04120 23S rRNA/tRNA pseudouridine synthase A
       O3O_10725 mnmA; tRNA-specific 2-thiouridylase MnmA
       O3O_12030 tRNA 2-thiocytidine biosynthesis protein TtcA
       O3O_23940 sulfur transfer protein SirA
       O3O_23295 sulfur transfer complex subunit TusB
       O3O_23300 sulfur relay protein TusC
       O3O_23305 sulfur transfer complex subunit TusD
       O3O_08800 sulfur transfer protein TusE
       O3O_18875 iscA; iron-sulfur cluster assembly protein
       O3O_20675 putative global regulator
       O3O_17760 mnmC; bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase
       O3O_05805 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
       O3O_06030 queuosine biosynthesis protein QueC
       O3O_19955 6-pyruvoyl tetrahydrobiopterin synthase
       O3O_20015 hypothetical protein
       O3O_20125 queF; 7-cyano-7-deazaguanine reductase
       O3O_02570 Fe-S electron transport protein
       O3O_11320 hypothetical protein
       O3O_06315 tRNA 2-selenouridine synthase
       O3O_05810 tgt; queuine tRNA-ribosyltransferase
       O3O_05905 tRNA s(4)U8 sulfurtransferase
       O3O_04750 tilS; tRNA(Ile)-lysidine synthetase
       O3O_18575 hydrolase
       O3O_14710 peptidase
       O3O_22015 UGMP family protein
       O3O_02580 ADP-binding protein
       O3O_20215 sulfur acceptor protein CsdL
       O3O_02635 exoribonuclease R
       O3O_22535 polynucleotide phosphorylase/polyadenylase
       O3O_18585 plasmid maintenance protein
       O3O_25887 hypothetical protein

K00784 rnz; ribonuclease Z [EC:3.1.26.11]
K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01008 selD; selenide, water dikinase [EC:2.7.9.3]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21]
K01147 rnb; exoribonuclease II [EC:3.1.13.1]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K07237 tusB; tRNA 2-thiouridine synthesizing protein B
K07236 tusC; tRNA 2-thiouridine synthesizing protein C
K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]