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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:etd03030]
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03410 Base excision repair [PATH:etd03410]
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03420 Nucleotide excision repair [PATH:etd03420]
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03430 Mismatch repair [PATH:etd03430]
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03440 Homologous recombination [PATH:etd03440]
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 ETAF_2658 recJ; Single-stranded-DNA-specific exonuclease RecJ
ETAF_2871 Single-stranded DNA-binding protein
ETAF_0003 recF; DNA recombination and repair protein RecF
ETAF_2454 recO; DNA recombination and repair protein RecO
ETAF_0953 recR; Recombination protein RecR
ETAF_2597 recA; RecA
ETAF_3163 DNA polymerase I
ETAF_1334 ruvA; Holliday junction DNA helicase RuvA
ETAF_1335 ruvB; Holliday junction DNA helicase RuvB
ETAF_1333 ruvC; Crossover junction endodeoxyribonuclease RuvC
ETAF_0027 recG; ATP-dependent DNA helicase RecG
ETAF_0650 Exodeoxyribonuclease V gamma chain
ETAF_0654 recD; Exodeoxyribonuclease V alpha chain
ETAF_0694 DNA polymerase III alpha subunit
ETAF_0002 DNA polymerase III beta subunit
ETAF_0951 DNA polymerase III subunits gamma and tau
ETAF_2379 DNA polymerase III delta subunit
ETAF_1892 DNA polymerase III delta prime subunit
ETAF_2561 DNA polymerase III epsilon subunit
ETAF_1432 DNA polymerase III theta subunit
ETAF_2795 DNA polymerase III chi subunit
ETAF_0429 DNA polymerase III psi subunit
ETAF_3095 priA; Helicase PriA
ETAF_0321 primosomal replication protein N
ETAF_0948 Primosomal replication protein N prime prime
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:etd03000]
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03021 Transcription machinery [BR:etd03021]
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03019 Messenger RNA biogenesis [BR:etd03019]
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03041 Spliceosome
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03011 Ribosome [BR:etd03011]
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03009 Ribosome biogenesis [BR:etd03009]
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03016 Transfer RNA biogenesis [BR:etd03016]
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03012 Translation factors [BR:etd03012]
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03110 Chaperones and folding catalysts [BR:etd03110]
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04131 Membrane trafficking [BR:etd04131]
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04121 Ubiquitin system [BR:etd04121]
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03051 Proteasome [BR:etd03051]
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03032 DNA replication proteins [BR:etd03032]
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03036 Chromosome and associated proteins [BR:etd03036]
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03400 DNA repair and recombination proteins [BR:etd03400]
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ETAF_2026 Methylated-DNA--protein-cysteine methyltransferase
ETAF_2338 Deoxyribodipyrimidine photolyase
ETAF_2467 Uracil-DNA glycosylase
ETAF_0228 A/G-specific adenine glycosylase
ETAF_1531 Endonuclease III
ETAF_0592 mutT; Mutator MutT protein
ETAF_1000 predicted isopentenyl-diphosphate delta-isomerase
ETAF_2079 Putative Mut family protein
ETAF_0037 Deoxyuridine 5'-triphosphate nucleotidohydrolase
ETAF_0406 G:T/U mismatch-specific uracil/thymine DNA-glycosylase
ETAF_0014 DNA-3-methyladenine glycosylase
ETAF_0042 Formamidopyrimidine-DNA glycosylase
ETAF_2331 Endonuclease VIII
ETAF_1389 Exodeoxyribonuclease III
ETAF_1100 Endonuclease IV
ETAF_0154 Endonuclease V
ETAF_2658 recJ; Single-stranded-DNA-specific exonuclease RecJ
ETAF_1062 DNA ligase
ETAF_3163 DNA polymerase I
ETAF_2872 Excinuclease ABC subunit A
ETAF_2289 Excinuclease ABC subunit B
ETAF_1843 Excinuclease ABC subunit C
ETAF_0098 ATP-dependent DNA helicase UvrD/PcrA
ETAF_0743 ATP-dependent DNA helicase
ETAF_0148 DNA-directed RNA polymerase beta subunit
ETAF_0149 DNA-directed RNA polymerase beta' subunit
ETAF_2896 DNA-directed RNA polymerase alpha subunit
ETAF_0030 DNA-directed RNA polymerase omega subunit
ETAF_1866 Transcription-repair coupling factor
ETAF_2608 mutS; DNA mismatch repair protein MutS
ETAF_0302 mutL; DNA mismatch repair protein MutL
ETAF_2619 mutH; DNA mismatch repair endonuclease MutH
ETAF_1088 Exodeoxyribonuclease I
ETAF_2527 Exodeoxyribonuclease VII large subunit
ETAF_0914 Exodeoxyribonuclease VII small subunit
ETAF_0694 DNA polymerase III alpha subunit
ETAF_0002 DNA polymerase III beta subunit
ETAF_2795 DNA polymerase III chi subunit
ETAF_2379 DNA polymerase III delta subunit
ETAF_1892 DNA polymerase III delta prime subunit
ETAF_2561 DNA polymerase III epsilon subunit
ETAF_0951 DNA polymerase III subunits gamma and tau
ETAF_0429 DNA polymerase III psi subunit
ETAF_1432 DNA polymerase III theta subunit
ETAF_2871 Single-stranded DNA-binding protein
ETAF_2948 Methyl-directed repair DNA adenine methylase
ETAF_0650 Exodeoxyribonuclease V gamma chain
ETAF_0654 recD; Exodeoxyribonuclease V alpha chain
ETAF_2597 recA; RecA
ETAF_1334 ruvA; Holliday junction DNA helicase RuvA
ETAF_1335 ruvB; Holliday junction DNA helicase RuvB
ETAF_1333 ruvC; Crossover junction endodeoxyribonuclease RuvC
ETAF_ple044 Crossover junction endodeoxyribonuclease rusA
ETAF_3095 priA; Helicase PriA
ETAF_0321 primosomal replication protein N
ETAF_0948 Primosomal replication protein N prime prime
ETAF_1005 sbcC; Exonuclease SbcC
ETAF_1006 sbcD; Exonuclease SbcD
ETAF_0490 radA; DNA repair protein RadA
ETAF_0003 recF; DNA recombination and repair protein RecF
ETAF_0027 recG; ATP-dependent DNA helicase RecG
ETAF_2454 recO; DNA recombination and repair protein RecO
ETAF_0953 recR; Recombination protein RecR
ETAF_2470 recN; DNA repair protein RecN
ETAF_1001 DNA recombination-dependent growth factor C
ETAF_ple033 recombination-associated protein RdgC
ETAF_2088 DNA or RNA helicase of superfamily II
ETAF_2108 DNA gyrase subunit A
ETAF_0004 DNA gyrase subunit B
ETAF_1441 DNA topoisomerase I
ETAF_0156 DNA-binding protein HU-alpha
ETAF_0928 DNA-binding protein HU-beta
ETAF_2845 DNA-binding protein Fis
ETAF_1636 Integration host factor alpha subunit
ETAF_1966 Integration host factor beta subunit
ETAF_0103 recQ; ATP-dependent DNA helicase RecQ
ETAF_1395 DNA-binding protein H-NS
ETAF_2697 DNA-binding protein H-NS
ETAF_0730 DNA polymerase IV
ETAF_0200 lexA; SOS-response repressor and protease LexA
ETAF_0553 DNA polymerase II
ETAF_1871 DNA-damage-inducible protein I
ETAF_2596 recX; regulatory protein RecX
ETAF_0069 ATP-dependent DNA helicase Rep
ETAF_1188 DNA helicase IV
ETAF_1097 dinG; ATP-dependent DNA helicase
ETAF_1351 yoaA; DinG family ATP-dependent helicase YoaA
ETAF_2110 Ribonucleotide reductase of class Ia, alpha subunit
ETAF_2111 Ribonucleotide reductase of class Ia, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03573 mutH; DNA mismatch repair protein MutH
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K02686 priB; primosomal replication protein N
K04067 priC; primosomal replication protein N''
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K03554 rdgC; recombination associated protein RdgC
K19789 radD; DNA repair protein RadD
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K05787 hupA; DNA-binding protein HU-alpha
K03530 hupB; DNA-binding protein HU-beta
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03746 hns; DNA-binding protein H-NS
K03746 hns; DNA-binding protein H-NS
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K02336 polB; DNA polymerase II [EC:2.7.7.7]
K12149 dinI; DNA-damage-inducible protein I
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03658 helD; DNA helicase IV [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:etd03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Edwardsiella tarda FL6-60