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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ftl03030]
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03410 Base excision repair [PATH:ftl03410]
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03420 Nucleotide excision repair [PATH:ftl03420]
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03430 Mismatch repair [PATH:ftl03430]
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03440 Homologous recombination [PATH:ftl03440]
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 FTL_1585 Single-stranded-DNA-specific exonuclease
FTL_0014 Single-strand binding protein
FTL_1352 DNA replication and repair protein recF
FTL_0720 DNA repair protein recO
FTL_1412 Recombination protein recR
FTL_0012 Recombinase A protein
FTL_1666 DNA polymerase I
FTL_0932 holliday junction DNA helicase, subunit A
FTL_1077 holliday junction DNA helicase, subunit B
FTL_0930 holliday junction endodeoxyribonuclease
FTL_0524 ATP-dependent DNA helicase RecG
FTL_0669 Exodeoxyribonuclease V beta chain
FTL_0666 Exodeoxyribonuclease V gamma chain
FTL_0670 Exodeoxyribonuclease V, alpha subunit
FTL_0472 DNA polymerase III alpha subunit
FTL_0002 DNA polymerase III, beta chain
FTL_1905 DNA polymerase III, gamma/tau subunits
FTL_1898 DNA polymerase III, delta subunit
FTL_1604 DNA polymerase III, delta prime subunit
FTL_1003 DNA polymerase III, epsilon subunit
FTL_0209 DNA polymerase III (CHI subunit) protein
FTL_1943 Primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ftl03000]
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03021 Transcription machinery [BR:ftl03021]
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03019 Messenger RNA biogenesis [BR:ftl03019]
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03041 Spliceosome
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03011 Ribosome [BR:ftl03011]
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03009 Ribosome biogenesis [BR:ftl03009]
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03016 Transfer RNA biogenesis [BR:ftl03016]
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03012 Translation factors [BR:ftl03012]
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03110 Chaperones and folding catalysts [BR:ftl03110]
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04131 Membrane trafficking [BR:ftl04131]
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04121 Ubiquitin system [BR:ftl04121]
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03051 Proteasome [BR:ftl03051]
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03032 DNA replication proteins [BR:ftl03032]
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03036 Chromosome and associated proteins [BR:ftl03036]
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03400 DNA repair and recombination proteins [BR:ftl03400]
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FTL_0275 Methylated-DNA--protein-cysteine methyltransferase
FTL_0341 deoxyribodipyrimidine photolyase
FTL_0342 deoxyribodipyrimidine photolyase
FTL_0529 Uracil-DNA glycosylase
FTL_0940 Methylpurine-DNA glycosylase family protein
FTL_0921 Endonuclease III
FTL_0315 MutT protein
FTL_0230 dUTP pyrophosphatase (Deoxyuridine 5'-triphosphate nucleotidohydrolase)
FTL_0343 conserved hypothetical protein
FTL_1543 Formamidopyrimidine-DNA glycosylase
FTL_1244 Exodeoxyribonuclease III
FTL_1585 Single-stranded-DNA-specific exonuclease
FTL_0676 DNA ligase
FTL_1666 DNA polymerase I
FTL_1473 DNA excision repair enzyme, subunit A
FTL_0745 DNA excision repair enzyme, subunit B (UvrABC system protein B)
FTL_1448 DNA excision repair enzyme, subunit C (UvrABC system protein A)
FTL_1656 DNA helicase II
FTL_1744 DNA-directed RNA polymerase beta chain
FTL_1743 DNA-directed RNA polymerase, beta subunit
FTL_0616 DNA-directed RNA polymerase, alpha subunit
FTL_0261 DNA-directed RNA polymerase, alpha subunit
FTL_1533 DNA-directed RNA polymerase omega subunit
FTL_0917 Transcription-repair coupling factor,ATP-dependent
FTL_0294 DNA mismatch repair protein MutS
FTL_1576 DNA mismatch repair protein
FTL_0744 Exodeoxyribonuclease I
FTL_0754 Exodeoxyribonuclease VII large subunit
FTL_0755 hypothetical protein
FTL_0472 DNA polymerase III alpha subunit
FTL_0002 DNA polymerase III, beta chain
FTL_0209 DNA polymerase III (CHI subunit) protein
FTL_1898 DNA polymerase III, delta subunit
FTL_1604 DNA polymerase III, delta prime subunit
FTL_1003 DNA polymerase III, epsilon subunit
FTL_1905 DNA polymerase III, gamma/tau subunits
FTL_0014 Single-strand binding protein
FTL_0669 Exodeoxyribonuclease V beta chain
FTL_0666 Exodeoxyribonuclease V gamma chain
FTL_0670 Exodeoxyribonuclease V, alpha subunit
FTL_0012 Recombinase A protein
FTL_0932 holliday junction DNA helicase, subunit A
FTL_1077 holliday junction DNA helicase, subunit B
FTL_0930 holliday junction endodeoxyribonuclease
FTL_1943 Primosomal protein N'
FTL_0374 DNA repair protein radA
FTL_1352 DNA replication and repair protein recF
FTL_0524 ATP-dependent DNA helicase RecG
FTL_0720 DNA repair protein recO
FTL_1412 Recombination protein recR
FTL_0389 DNA repair protein recN
FTL_1119 recombination associated protein
FTL_0533 DNA gyrase, subunit A
FTL_1547 DNA gyrase subunit B
FTL_0426 DNA topoisomerase I
FTL_0895 Histone-like protein HU form B
FTL_0981 DNA polymerase IV, devoid of proofreading,damage inducible protein P
FTL_0662 prophage repressor protein
FTL_0013 Regulatory protein recX
FTL_1116 ATP-dependent DNA helicase
FTL_0986 Ribonucleoside-diphosphate reductase, alpha subunit
FTL_0984 Biofunctional protein, glutaredoxin 3 protein/Ribonucleoside-diphosphate reductase, beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:ftl03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Francisella tularensis subsp. holarctica LVS