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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:ftt03030]
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 FTV_0511 dnaQ; DNA polymerase III epsilon subunit
FTV_0373 dnaE; DNA polymerase III alpha subunit
FTV_0179 dnaX; DNA polymerase III subunits gamma and tau
FTV_0427 holB; DNA polymerase III delta prime subunit
FTV_0186 holA; DNA polymerase III delta subunit
FTV_0277 holC; DNA polymerase III (CHI subunit) protein
FTV_0002 dnaN; DNA polymerase III beta subunit
FTV_1013 dnaB; Replicative DNA helicase
FTV_0992 dnaG; DNA primase
FTV_1669 ssb; Single-stranded DNA-binding protein
FTV_0550 rnhA; Ribonuclease HI
FTV_1221 rnhB; Ribonuclease HII
FTV_0103 polA; DNA polymerase I
FTV_1326 ligN; DNA ligase
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K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03410 Base excision repair [PATH:ftt03410]
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03420 Nucleotide excision repair [PATH:ftt03420]
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03430 Mismatch repair [PATH:ftt03430]
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FTV_1430 muts; DNA mismatch repair protein MutS
FTV_0453 mutL; DNA mismatch repair protein MutL
FTV_0113 uvrD; ATP-dependent DNA helicase UvrD
FTV_1149 sbcB; Exodeoxyribonuclease I
FTV_1139 xseA; Exodeoxyribonuclease VII large subunit
FTV_1138 hypothetical protein
FTV_0445 recJ; Single-stranded-DNA-specific exonuclease RecJ
FTV_1669 ssb; Single-stranded DNA-binding protein
FTV_0373 dnaE; DNA polymerase III alpha subunit
FTV_0002 dnaN; DNA polymerase III beta subunit
FTV_0179 dnaX; DNA polymerase III subunits gamma and tau
FTV_0186 holA; DNA polymerase III delta subunit
FTV_0427 holB; DNA polymerase III delta prime subunit
FTV_0511 dnaQ; DNA polymerase III epsilon subunit
FTV_0277 holC; DNA polymerase III (CHI subunit) protein
FTV_1326 ligN; DNA ligase
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K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03440 Homologous recombination [PATH:ftt03440]
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FTV_0445 recJ; Single-stranded-DNA-specific exonuclease RecJ
FTV_1669 ssb; Single-stranded DNA-binding protein
FTV_0720 recF; DNA recombination and repair protein RecF
FTV_1172 recO; DNA recombination and repair protein RecO
FTV_0765 recR; recombination protein RecR
FTV_1667 recA; RecA protein
FTV_0103 polA; DNA polymerase I
FTV_0618 ruvA; Holliday junction DNA helicase RuvA
FTV_0969 ruvB; Holliday junction DNA helicase RuvB
FTV_0616 ruvC; Crossover junction endodeoxyribonuclease RuvC
FTV_1524 recG; ATP-dependent DNA helicase RecG
FTV_1333 recB; Exodeoxyribonuclease V beta chain
FTV_1336 recC; Exodeoxyribonuclease V gamma chain
FTV_1332 recD; Exodeoxyribonuclease V alpha chain
FTV_0373 dnaE; DNA polymerase III alpha subunit
FTV_0002 dnaN; DNA polymerase III beta subunit
FTV_0179 dnaX; DNA polymerase III subunits gamma and tau
FTV_0186 holA; DNA polymerase III delta subunit
FTV_0427 holB; DNA polymerase III delta prime subunit
FTV_0511 dnaQ; DNA polymerase III epsilon subunit
FTV_0277 holC; DNA polymerase III (CHI subunit) protein
FTV_0202 priA; Helicase PriA essential for oriC
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:ftt03000]
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03021 Transcription machinery [BR:ftt03021]
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03019 Messenger RNA biogenesis [BR:ftt03019]
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03041 Spliceosome
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03011 Ribosome [BR:ftt03011]
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03009 Ribosome biogenesis [BR:ftt03009]
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03016 Transfer RNA biogenesis [BR:ftt03016]
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03012 Translation factors [BR:ftt03012]
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03110 Chaperones and folding catalysts [BR:ftt03110]
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04131 Membrane trafficking [BR:ftt04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:ftt03051]
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03032 DNA replication proteins [BR:ftt03032]
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FTV_0550 rnhA; Ribonuclease HI
FTV_0587 hupB; DNA-binding protein HU-beta
FTV_0001 dnaA; Chromosomal replication initiator protein DnaA
FTV_1013 dnaB; Replicative DNA helicase
FTV_0992 dnaG; DNA primase
FTV_1669 ssb; Single-stranded DNA-binding protein
FTV_0373 dnaE; DNA polymerase III alpha subunit
FTV_0002 dnaN; DNA polymerase III beta subunit
FTV_0277 holC; DNA polymerase III (CHI subunit) protein
FTV_0186 holA; DNA polymerase III delta subunit
FTV_0427 holB; DNA polymerase III delta prime subunit
FTV_0511 dnaQ; DNA polymerase III epsilon subunit
FTV_0179 dnaX; DNA polymerase III subunits gamma and tau
FTV_1221 rnhB; Ribonuclease HII
FTV_0103 polA; DNA polymerase I
FTV_1326 ligN; DNA ligase
FTV_1503 gyrA; DNA gyrase subunit A
FTV_0476 gyrB; DNA gyrase subunit B
FTV_0367 parC; Topoisomerase IV subunit A
FTV_0153 parE; Topoisomerase IV subunit B
FTV_0861 topA; DNA topoisomerase I
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K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
K03530 hupB; DNA-binding protein HU-beta
K02313 dnaA; chromosomal replication initiator protein
K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
K02316 dnaG; DNA primase [EC:2.7.7.101]
K03111 ssb; single-strand DNA-binding protein
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
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03036 Chromosome and associated proteins [BR:ftt03036]
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03400 DNA repair and recombination proteins [BR:ftt03400]
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FTV_1449 ogt; Methylated-DNA--protein-cysteine methyltransferase
FTV_0800 Deoxyribodipyrimidine photolyase
FTV_1506 ung; Uracil-DNA glycosylase family 1
FTV_0625 DNA-3-methyladenine glycosylase II
FTV_0608 nth; Endonuclease III
FTV_0940 mutT; Mutator mutT protein (7 8-dihydro-8-oxoguanine-triphosphatase)
FTV_0777 Phosphohydrolase
FTV_0297 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase
FTV_0801 Protein related to deoxyribodipyrimidine photolyase
FTV_0651 mutM; Formamidopyrimidine-DNA glycosylase
FTV_0914 xthA; Exodeoxyribonuclease III
FTV_0445 recJ; Single-stranded-DNA-specific exonuclease RecJ
FTV_1326 ligN; DNA ligase
FTV_0103 polA; DNA polymerase I
FTV_1254 uvrA; Excinuclease ABC subunit A
FTV_1148 uvrB; Excinuclease ABC subunit B
FTV_0734 uvrC; Excinuclease ABC subunit C
FTV_0113 uvrD; ATP-dependent DNA helicase UvrD
FTV_0135 rpoB; DNA-directed RNA polymerase beta subunit
FTV_0136 rpoC; DNA-directed RNA polymerase beta' subunit
FTV_0327 rpoA1; DNA-directed RNA polymerase alpha subunit
FTV_1377 rpoA2; DNA-directed RNA polymerase alpha subunit
FTV_0661 rpoZ; DNA-directed RNA polymerase omega subunit
FTV_0604 mfd; Transcription-repair coupling factor
FTV_1430 muts; DNA mismatch repair protein MutS
FTV_0453 mutL; DNA mismatch repair protein MutL
FTV_1149 sbcB; Exodeoxyribonuclease I
FTV_1139 xseA; Exodeoxyribonuclease VII large subunit
FTV_1138 hypothetical protein
FTV_0373 dnaE; DNA polymerase III alpha subunit
FTV_0002 dnaN; DNA polymerase III beta subunit
FTV_0277 holC; DNA polymerase III (CHI subunit) protein
FTV_0186 holA; DNA polymerase III delta subunit
FTV_0427 holB; DNA polymerase III delta prime subunit
FTV_0511 dnaQ; DNA polymerase III epsilon subunit
FTV_0179 dnaX; DNA polymerase III subunits gamma and tau
FTV_1669 ssb; Single-stranded DNA-binding protein
FTV_1333 recB; Exodeoxyribonuclease V beta chain
FTV_1336 recC; Exodeoxyribonuclease V gamma chain
FTV_1332 recD; Exodeoxyribonuclease V alpha chain
FTV_1667 recA; RecA protein
FTV_0618 ruvA; Holliday junction DNA helicase RuvA
FTV_0969 ruvB; Holliday junction DNA helicase RuvB
FTV_0616 ruvC; Crossover junction endodeoxyribonuclease RuvC
FTV_0202 priA; Helicase PriA essential for oriC
FTV_0828 radA; DNA repair protein RadA
FTV_0720 recF; DNA recombination and repair protein RecF
FTV_1524 recG; ATP-dependent DNA helicase RecG
FTV_1172 recO; DNA recombination and repair protein RecO
FTV_0765 recR; recombination protein RecR
FTV_0841 DNA repair protein RecN
FTV_1036 rdgC; DNA recombination-dependent growth factor C
FTV_1503 gyrA; DNA gyrase subunit A
FTV_0476 gyrB; DNA gyrase subunit B
FTV_0861 topA; DNA topoisomerase I
FTV_0587 hupB; DNA-binding protein HU-beta
FTV_1339 SOS-response repressor and protease LexA
FTV_1668 recX; Regulatory protein RecX
FTV_1039 rep; ATP-dependent DNA helicase Rep
FTV_0497 nrdA; Ribonucleotide reductase of class Ia (aerobic) alpha subunit
FTV_0495 grxC; Ribonucleotide reductase of class Ia (aerobic) beta subunit
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:ftt03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Francisella tularensis subsp. tularensis TI0902