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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:gca03030]
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03410 Base excision repair [PATH:gca03410]
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03420 Nucleotide excision repair [PATH:gca03420]
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03430 Mismatch repair [PATH:gca03430]
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03440 Homologous recombination [PATH:gca03440]
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 Galf_1649 single-stranded-DNA-specific exonuclease RecJ
Galf_2423 single-strand binding protein
Galf_0952 single-strand binding protein
Galf_1194 DNA repair protein RecO
Galf_1178 recombination protein RecR
Galf_0508 recA protein
Galf_0198 DNA polymerase I
Galf_2591 Holliday junction DNA helicase RuvA
Galf_2589 Holliday junction DNA helicase RuvB
Galf_2593 crossover junction endodeoxyribonuclease RuvC
Galf_2652 ATP-dependent DNA helicase RecG
Galf_0893 putative transcriptional regulator
Galf_2404 AAA ATPase
Galf_2417 AAA ATPase
Galf_2761 hypothetical protein
Galf_0400 DNA polymerase III, alpha subunit
Galf_0002 DNA polymerase III, beta subunit
Galf_1176 DNA polymerase III, subunits gamma and tau
Galf_2876 DNA polymerase III, delta subunit
Galf_0813 DNA polymerase III, delta prime subunit
Galf_2631 Exonuclease RNase T and DNA polymerase III
Galf_1343 DNA polymerase III, epsilon subunit
Galf_2244 Exonuclease RNase T and DNA polymerase III
Galf_2872 DNA polymerase III, epsilon subunit
Galf_2525 DNA polymerase III chi subunit HolC
Galf_0177 primosomal protein N'
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:gca03000]
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03021 Transcription machinery [BR:gca03021]
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03019 Messenger RNA biogenesis [BR:gca03019]
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03041 Spliceosome
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03011 Ribosome [BR:gca03011]
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03009 Ribosome biogenesis [BR:gca03009]
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03016 Transfer RNA biogenesis [BR:gca03016]
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03012 Translation factors [BR:gca03012]
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03110 Chaperones and folding catalysts [BR:gca03110]
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04131 Membrane trafficking [BR:gca04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:gca03051]
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03032 DNA replication proteins [BR:gca03032]
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03036 Chromosome and associated proteins [BR:gca03036]
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03400 DNA repair and recombination proteins [BR:gca03400]
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Galf_2732 methylated-DNA/protein-cysteine methyltransferase
Galf_0121 Deoxyribodipyrimidine photo-lyase
Galf_1743 uracil-DNA glycosylase
Galf_0273 A/G-specific adenine glycosylase
Galf_2369 endonuclease III
Galf_0288 mutator MutT protein
Galf_2303 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Galf_0612 phage SPO1 DNA polymerase-related protein
Galf_2685 DNA-3-methyladenine glycosylase I
Galf_0470 formamidopyrimidine-DNA glycosylase
Galf_0140 exodeoxyribonuclease III Xth
Galf_0043 exodeoxyribonuclease III Xth
Galf_1649 single-stranded-DNA-specific exonuclease RecJ
Galf_1199 DNA ligase, NAD-dependent
Galf_0198 DNA polymerase I
Galf_0626 excinuclease ABC, A subunit
Galf_0653 excinuclease ABC, B subunit
Galf_1541 excinuclease ABC, C subunit
Galf_0189 UvrD/REP helicase
Galf_0551 DNA-directed RNA polymerase, beta subunit
Galf_0552 DNA-directed RNA polymerase, beta' subunit
Galf_0584 DNA-directed RNA polymerase, alpha subunit
Galf_0388 DNA-directed RNA polymerase, omega subunit
Galf_0607 transcription-repair coupling factor
Galf_0638 DNA mismatch repair protein MutS
Galf_1318 DNA mismatch repair protein MutL
Galf_0663 exodeoxyribonuclease VII, large subunit
Galf_2271 exodeoxyribonuclease VII, small subunit
Galf_0400 DNA polymerase III, alpha subunit
Galf_0002 DNA polymerase III, beta subunit
Galf_2525 DNA polymerase III chi subunit HolC
Galf_2876 DNA polymerase III, delta subunit
Galf_0813 DNA polymerase III, delta prime subunit
Galf_2631 Exonuclease RNase T and DNA polymerase III
Galf_1343 DNA polymerase III, epsilon subunit
Galf_2244 Exonuclease RNase T and DNA polymerase III
Galf_2872 DNA polymerase III, epsilon subunit
Galf_1176 DNA polymerase III, subunits gamma and tau
Galf_2423 single-strand binding protein
Galf_0952 single-strand binding protein
Galf_2404 AAA ATPase
Galf_2417 AAA ATPase
Galf_2761 hypothetical protein
Galf_0508 recA protein
Galf_2591 Holliday junction DNA helicase RuvA
Galf_2589 Holliday junction DNA helicase RuvB
Galf_2593 crossover junction endodeoxyribonuclease RuvC
Galf_0177 primosomal protein N'
Galf_1866 DNA repair protein RadA
Galf_2652 ATP-dependent DNA helicase RecG
Galf_0893 putative transcriptional regulator
Galf_1194 DNA repair protein RecO
Galf_1178 recombination protein RecR
Galf_2154 DNA repair protein RecN
Galf_0196 exonuclease RdgC
Galf_2443 UvrD/REP helicase
Galf_2444 hypothetical protein
Galf_1136 DNA gyrase, A subunit
Galf_0003 DNA gyrase, B subunit
Galf_0018 DNA topoisomerase I
Galf_0881 histone family protein DNA-binding protein
Galf_1501 histone family protein DNA-binding protein
Galf_1363 histone family protein DNA-binding protein
Galf_1624 histone family protein DNA-binding protein
Galf_0949 RecT protein
Galf_2661 transcriptional regulator, Fis family
Galf_0989 integration host factor, alpha subunit
Galf_1116 integration host factor, alpha subunit
Galf_1472 integration host factor, beta subunit
Galf_1147 integration host factor, beta subunit
Galf_0716 integration host factor, beta subunit
Galf_1948 integration host factor, beta subunit
Galf_1563 ATP-dependent DNA helicase RecQ
Galf_1432 ATP-dependent DNA helicase, RecQ family
Galf_0633 DNA-directed DNA polymerase
Galf_2401 DNA-directed DNA polymerase
Galf_0634 Peptidase S24/S26A/S26B, conserved region
Galf_2402 Peptidase S24/S26A/S26B, conserved region
Galf_0635 LexA repressor
Galf_2611 DNA-damage-inducible protein D
Galf_0509 regulatory protein RecX
Galf_1128 UvrD/REP helicase
Galf_1868 type III restriction protein res subunit
Galf_0372 ribonucleoside-diphosphate reductase, alpha subunit
Galf_2012 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Galf_0373 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03554 rdgC; recombination associated protein RdgC
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K07455 recT; recombination protein RecT
K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
K04764 ihfA; integration host factor subunit alpha
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K05788 ihfB; integration host factor subunit beta
K05788 ihfB; integration host factor subunit beta
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03502 umuC; DNA polymerase V
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14623 dinD; DNA-damage-inducible protein D
K03565 recX; regulatory protein
K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:gca03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Gallionella capsiferriformans