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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:gor03030]
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03410 Base excision repair [PATH:gor03410]
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03420 Nucleotide excision repair [PATH:gor03420]
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03430 Mismatch repair [PATH:gor03430]
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03440 Homologous recombination [PATH:gor03440]
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 KTR9_4918 Single-stranded DNA-specific exonuclease
KTR9_1947 Single-stranded DNA-binding protein
KTR9_4866 Single-stranded DNA-binding protein
KTR9_4601 Single-stranded DNA-binding protein
KTR9_0004 Recombinational DNA repair ATPase (RecF pathway)
KTR9_3149 Recombinational DNA repair protein (RecF pathway)
KTR9_0363 Recombinational DNA repair protein (RecF pathway)
KTR9_2119 RecA/RadA recombinase
KTR9_2767 DNA polymerase I - 3'-5' exonuclease and polymerase domains
KTR9_2218 Holliday junction resolvasome, DNA-binding subunit
KTR9_2219 Holliday junction resolvasome, helicase subunit
KTR9_2217 Holliday junction resolvasome, endonuclease subunit
KTR9_3238 RecG-like helicase
KTR9_2624 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
KTR9_2625 Exonuclease V gamma subunit
KTR9_2623 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
KTR9_2987 DNA polymerase III, alpha subunit
KTR9_0003 DNA polymerase III subunit beta
KTR9_0355 DNA polymerase III, gamma/tau subunits
KTR9_3220 DNA polymerase III, delta subunit
KTR9_0439 ATPase involved in DNA replication
KTR9_3041 Nuclease subunit of the excinuclease complex
KTR9_2264 Primosomal protein N' (replication factor Y) - superfamily II helicase
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining [PATH:gor03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:gor03000]
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03021 Transcription machinery [BR:gor03021]
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03019 Messenger RNA biogenesis [BR:gor03019]
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03041 Spliceosome
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03011 Ribosome [BR:gor03011]
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03009 Ribosome biogenesis [BR:gor03009]
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03016 Transfer RNA biogenesis [BR:gor03016]
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03012 Translation factors [BR:gor03012]
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03110 Chaperones and folding catalysts [BR:gor03110]
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04131 Membrane trafficking [BR:gor04131]
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04121 Ubiquitin system [BR:gor04121]
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03051 Proteasome [BR:gor03051]
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03032 DNA replication proteins [BR:gor03032]
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03036 Chromosome and associated proteins [BR:gor03036]
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03400 DNA repair and recombination proteins [BR:gor03400]
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KTR9_2679 Methylated DNA-protein cysteine methyltransferase
KTR9_3441 Methylated DNA-protein cysteine methyltransferase
KTR9_1179 Deoxyribodipyrimidine photolyase
KTR9_3243 Uracil DNA glycosylase
KTR9_1212 3-methyladenine DNA glycosylase
KTR9_0861 A/G-specific DNA glycosylase
KTR9_0417 putative EndoIII-related endonuclease
KTR9_1104 DNA or RNA helicases of superfamily II
KTR9_4251 NTP pyrophosphohydrolase
KTR9_1253 ADP-ribose pyrophosphatase
KTR9_2166 dUTPase
KTR9_4234 putative deoxyribodipyrimidine photolyase
KTR9_2659 G:T/U mismatch-specific DNA glycosylase
KTR9_2510 Uracil-DNA glycosylase
KTR9_0366 Uracil-DNA glycosylase
KTR9_3440 3-methyladenine DNA glycosylase / 8-oxoguanine DNA glycosylase
KTR9_4025 3-methyladenine DNA glycosylase
KTR9_1237 Formamidopyrimidine-DNA glycosylase
KTR9_2002 Formamidopyrimidine-DNA glycosylase
KTR9_1730 Formamidopyrimidine-DNA glycosylase
KTR9_1972 Formamidopyrimidine-DNA glycosylase
KTR9_0281 Exonuclease III
KTR9_0509 Exonuclease III
KTR9_1699 Exonuclease III
KTR9_3761 Exonuclease III
KTR9_4287 Endonuclease IV
KTR9_4918 Single-stranded DNA-specific exonuclease
KTR9_3287 NAD-dependent DNA ligase
KTR9_2767 DNA polymerase I - 3'-5' exonuclease and polymerase domains
KTR9_2728 Excinuclease ATPase subunit
KTR9_2737 Helicase subunit of the DNA excision repair complex
KTR9_2278 Nuclease subunit of the excinuclease complex
KTR9_1245 Superfamily I DNA and RNA helicase
KTR9_3524 Superfamily I DNA and RNA helicase
KTR9_3528 Superfamily I DNA and RNA helicase
KTR9_4897 Superfamily I DNA and RNA helicases
KTR9_1011 DNA-directed RNA polymerase, beta subunit/140 kD subunit
KTR9_1012 DNA-directed RNA polymerase, beta' subunit/160 kD subunit
KTR9_3636 DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KTR9_2261 DNA-directed RNA polymerase, subunit K/omega
KTR9_1474 Transcription-repair coupling factor
KTR9_1637 Exonuclease VII, large subunit
KTR9_1636 Exonuclease VII small subunit
KTR9_2987 DNA polymerase III, alpha subunit
KTR9_0003 DNA polymerase III subunit beta
KTR9_3220 DNA polymerase III, delta subunit
KTR9_0439 ATPase involved in DNA replication
KTR9_3041 Nuclease subunit of the excinuclease complex
KTR9_0355 DNA polymerase III, gamma/tau subunits
KTR9_1947 Single-stranded DNA-binding protein
KTR9_4866 Single-stranded DNA-binding protein
KTR9_4601 Single-stranded DNA-binding protein
KTR9_2454 DNA G:T-mismatch repair endonuclease
KTR9_2624 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
KTR9_2625 Exonuclease V gamma subunit
KTR9_2623 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
KTR9_2119 RecA/RadA recombinase
KTR9_2218 Holliday junction resolvasome, DNA-binding subunit
KTR9_2219 Holliday junction resolvasome, helicase subunit
KTR9_2217 Holliday junction resolvasome, endonuclease subunit
KTR9_1353 hypothetical protein
KTR9_2264 Primosomal protein N' (replication factor Y) - superfamily II helicase
KTR9_1837 ATPase involved in DNA repair
KTR9_1836 DNA repair exonuclease
KTR9_0866 putative ATP-dependent serine protease
KTR9_0004 Recombinational DNA repair ATPase (RecF pathway)
KTR9_3238 RecG-like helicase
KTR9_3149 Recombinational DNA repair protein (RecF pathway)
KTR9_0363 Recombinational DNA repair protein (RecF pathway)
KTR9_2702 ATPase involved in DNA repair
KTR9_1938 putative ATPase
KTR9_4497 hypothetical protein
KTR9_4500 ATP-dependent DNA ligase
KTR9_5426 ATP-dependent DNA ligase
KTR9_0007 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KTR9_0006 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
KTR9_0437 Topoisomerase IA
KTR9_3252 Bacterial nucleoid DNA-binding protein
KTR9_0743 Superfamily II DNA helicase
KTR9_1030 DNA-directed DNA polymerase
KTR9_2994 Nucleotidyltransferase/DNA polymerase involved in DNA repair
KTR9_4638 DNA-directed DNA polymerase
KTR9_2137 SOS-response transcriptional repressors (RecA-mediated autopeptidases)
KTR9_1679 hypothetical protein
KTR9_1685 DNA polymerase III, alpha subunit
KTR9_1340 hypothetical protein
KTR9_2120 regulatory protein RecX
KTR9_1891 Rad3-related DNA helicase
KTR9_1731 Lhr-like helicase
KTR9_3251 Fructose-2,6-bisphosphatase
KTR9_2698 NTP pyrophosphohydrolase including oxidative damage repair enzymes
KTR9_3329 Ribonucleotide reductase, alpha subunit
KTR9_3328 Ribonucleotide reductase, beta subunit
KTR9_4385 Ribonucleotide reductase, beta subunit
KTR9_2079 Exopolyphosphatase-related protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K14623 dinD; DNA-damage-inducible protein D
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:gor03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Gordonia sp. KTR9