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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:hpu03030]
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03410 Base excision repair [PATH:hpu03410]
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03420 Nucleotide excision repair [PATH:hpu03420]
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03430 Mismatch repair [PATH:hpu03430]
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03440 Homologous recombination [PATH:hpu03440]
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 HPCU_02055 single-stranded-DNA specific exonuclease
HPCU_06360 single-stranded DNA-binding protein
HPCU_04860 recR; recombination protein RecR
HPCU_00730 recA; recombinase A
HPCU_04680 ruvA; Holliday junction DNA helicase RuvA
HPCU_02275 ruvB; Holliday junction DNA helicase RuvB
HPCU_04655 ruvC; Holliday junction resolvase
HPCU_07655 ATP-dependent DNA helicase RecG
HPCU_07360 dnaE; DNA polymerase III subunit alpha
HPCU_02735 DNA polymerase III subunit beta
HPCU_03845 DNA polymerase III subunits gamma and tau
HPCU_06375 DNA polymerase III subunit delta
HPCU_06260 DNA polymerase III subunit delta'
HPCU_07815 DNA polymerase III subunit epsilon
HPCU_05405 primosome assembly protein PriA
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:hpu03000]
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03021 Transcription machinery [BR:hpu03021]
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03019 Messenger RNA biogenesis [BR:hpu03019]
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03041 Spliceosome
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03011 Ribosome [BR:hpu03011]
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03009 Ribosome biogenesis [BR:hpu03009]
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03016 Transfer RNA biogenesis [BR:hpu03016]
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03012 Translation factors [BR:hpu03012]
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03110 Chaperones and folding catalysts [BR:hpu03110]
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04131 Membrane trafficking [BR:hpu04131]
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04121 Ubiquitin system
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03051 Proteasome [BR:hpu03051]
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03032 DNA replication proteins [BR:hpu03032]
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03036 Chromosome and associated proteins [BR:hpu03036]
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03400 DNA repair and recombination proteins [BR:hpu03400]
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HPCU_03640 methylated-DNA--protein-cysteine methyltransferase
HPCU_06880 uracil-DNA glycosylase
HPCU_00670 DNA glycosylase MutY
HPCU_03190 endonuclease III
HPCU_04595 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
HPCU_03530 hypothetical protein
HPCU_07670 exodeoxyribonuclease III
HPCU_02055 single-stranded-DNA specific exonuclease
HPCU_03350 ligA; NAD-dependent DNA ligase LigA
HPCU_03795 uvrA; excinuclease ABC subunit A
HPCU_05645 excinuclease ABC subunit B
HPCU_04345 uvrC; excinuclease ABC subunit C
HPCU_04795 rep helicase, single-stranded DNA-dependent ATPase
HPCU_07450 DNA helicase II
HPCU_06100 DNA-directed RNA polymerase subunit beta/beta'
HPCU_06610 DNA-directed RNA polymerase subunit alpha
HPCU_04125 DNA-directed RNA polymerase subunit omega
HPCU_07945 transcription-repair coupling factor
HPCU_03390 recombination and DNA strand exchange inhibitor protein
HPCU_01620 xseA; exodeoxyribonuclease VII large subunit
HPCU_07470 exodeoxyribonuclease VII small subunit
HPCU_07360 dnaE; DNA polymerase III subunit alpha
HPCU_02735 DNA polymerase III subunit beta
HPCU_06375 DNA polymerase III subunit delta
HPCU_06260 DNA polymerase III subunit delta'
HPCU_07815 DNA polymerase III subunit epsilon
HPCU_03845 DNA polymerase III subunits gamma and tau
HPCU_06360 single-stranded DNA-binding protein
HPCU_02635 type II adenine specific DNA methyltransferase
HPCU_00730 recA; recombinase A
HPCU_04680 ruvA; Holliday junction DNA helicase RuvA
HPCU_02275 ruvB; Holliday junction DNA helicase RuvB
HPCU_04655 ruvC; Holliday junction resolvase
HPCU_05405 primosome assembly protein PriA
HPCU_01425 DNA repair protein RadA
HPCU_01075 hypothetical protein
HPCU_07655 ATP-dependent DNA helicase RecG
HPCU_04860 recR; recombination protein RecR
HPCU_07780 DNA repair protein RecN
HPCU_03770 DNA gyrase subunit A
HPCU_02740 gyrB; DNA gyrase subunit B
HPCU_01205 topoisomerase I
HPCU_00550 DNA topoisomerase I
HPCU_04420 DNA-binding protein HU
HPCU_03655 ribonucleotide-diphosphate reductase subunit alpha
HPCU_05520 nrdF; ribonucleotide-diphosphate reductase subunit beta
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K07456 mutS2; DNA mismatch repair protein MutS2
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K04485 radA; DNA repair protein RadA/Sms
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:hpu03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Helicobacter pylori Cuz20