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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:iva03030]
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03410 Base excision repair [PATH:iva03410]
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 Isova_2696 endonuclease III
Isova_2614 Uracil-DNA glycosylase
Isova_0538 HhH-GPD family protein
Isova_1348 3-methyladenine DNA glycosylase
Isova_1213 DNA-formamidopyrimidine glycosylase
Isova_2086 Formamidopyrimidine-DNA glycosylase
Isova_1070 DNA glycosylase/AP lyase, H2TH DNA-binding protein
Isova_1242 DNA-(apurinic or apyrimidinic site) lyase
Isova_0295 DNA repair protein and transcriptional regulator, AraC family
Isova_0075 DNA-3-methyladenine glycosylase I
Isova_0443 phage SPO1 DNA polymerase-related protein
Isova_1668 Uracil-DNA glycosylase superfamily
Isova_0300 exodeoxyribonuclease III Xth
Isova_0807 exodeoxyribonuclease III Xth
Isova_2914 Deoxyribonuclease IV (phage-T(4)-induced)
Isova_1470 DNA polymerase I
Isova_2210 DNA ligase
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:iva03420]
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03430 Mismatch repair [PATH:iva03430]
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03440 Homologous recombination [PATH:iva03440]
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03450 Non-homologous end-joining [PATH:iva03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:iva03000]
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03021 Transcription machinery [BR:iva03021]
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03019 Messenger RNA biogenesis [BR:iva03019]
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03041 Spliceosome
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03011 Ribosome [BR:iva03011]
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03009 Ribosome biogenesis [BR:iva03009]
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03016 Transfer RNA biogenesis [BR:iva03016]
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03012 Translation factors [BR:iva03012]
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03110 Chaperones and folding catalysts [BR:iva03110]
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04131 Membrane trafficking [BR:iva04131]
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04121 Ubiquitin system [BR:iva04121]
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03051 Proteasome [BR:iva03051]
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03032 DNA replication proteins [BR:iva03032]
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03036 Chromosome and associated proteins [BR:iva03036]
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03400 DNA repair and recombination proteins [BR:iva03400]
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Isova_2943 methylated-DNA/protein-cysteine methyltransferase
Isova_0294 methylated-DNA/protein-cysteine methyltransferase
Isova_2614 Uracil-DNA glycosylase
Isova_1348 3-methyladenine DNA glycosylase
Isova_0538 HhH-GPD family protein
Isova_2696 endonuclease III
Isova_2595 helicase domain-containing protein
Isova_0059 NUDIX hydrolase
Isova_0981 NUDIX hydrolase
Isova_1303 NUDIX hydrolase
Isova_1783 Deoxyuridine 5'-triphosphate nucleotidohydrolase
Isova_0443 phage SPO1 DNA polymerase-related protein
Isova_1668 Uracil-DNA glycosylase superfamily
Isova_0295 DNA repair protein and transcriptional regulator, AraC family
Isova_0075 DNA-3-methyladenine glycosylase I
Isova_1213 DNA-formamidopyrimidine glycosylase
Isova_2086 Formamidopyrimidine-DNA glycosylase
Isova_1070 DNA glycosylase/AP lyase, H2TH DNA-binding protein
Isova_1242 DNA-(apurinic or apyrimidinic site) lyase
Isova_0300 exodeoxyribonuclease III Xth
Isova_0807 exodeoxyribonuclease III Xth
Isova_2914 Deoxyribonuclease IV (phage-T(4)-induced)
Isova_2210 DNA ligase
Isova_1470 DNA polymerase I
Isova_1481 UvrABC system protein A
Isova_1476 UvrABC system protein B
Isova_1483 UvrABC system protein C
Isova_0757 ATP-dependent DNA helicase PcrA
Isova_0827 UvrD/REP helicase
Isova_0831 UvrD/REP helicase
Isova_0650 DNA-directed RNA polymerase subunit beta
Isova_0651 DNA-directed RNA polymerase subunit beta'
Isova_0684 DNA-directed RNA polymerase subunit alpha
Isova_1601 DNA-directed RNA polymerase subunit omega
Isova_2499 transcription-repair coupling factor
Isova_0908 Exodeoxyribonuclease 7 large subunit
Isova_0906 Exodeoxyribonuclease 7 small subunit
Isova_1302 DNA polymerase III, alpha subunit
Isova_0002 DNA polymerase III, beta subunit
Isova_1993 DNA polymerase III, delta subunit
Isova_0427 DNA polymerase III, delta prime subunit
Isova_1819 DNA polymerase III, epsilon subunit
Isova_0721 Exonuclease RNase T and DNA polymerase III
Isova_0880 Exonuclease RNase T and DNA polymerase III
Isova_2736 DNA polymerase III, subunits gamma and tau
Isova_2998 single-strand binding protein
Isova_1055 single-strand binding protein
Isova_0168 DNA mismatch endonuclease Vsr
Isova_0816 exodeoxyribonuclease V, beta subunit
Isova_0815 exodeoxyribonuclease V, gamma subunit
Isova_0817 exodeoxyribonuclease V, alpha subunit
Isova_1246 Protein recA
Isova_1654 Holliday junction ATP-dependent DNA helicase ruvA
Isova_1653 Holliday junction ATP-dependent DNA helicase ruvB
Isova_1655 Crossover junction endodeoxyribonuclease ruvC
Isova_1598 primosomal protein N'
Isova_0542 DNA repair protein RadA
Isova_0004 DNA replication and repair protein recF
Isova_2093 DEAD/DEAH box helicase domain protein
Isova_1969 DNA repair protein recO
Isova_2723 Recombination protein recR
Isova_1355 DNA repair protein RecN
Isova_2007 DNA repair protein
Isova_2011 DNA polymerase LigD, polymerase domain protein
Isova_0008 DNA gyrase, A subunit
Isova_1794 DNA topoisomerase (ATP-hydrolyzing)
Isova_0007 DNA gyrase, B subunit
Isova_1803 DNA topoisomerase (ATP-hydrolyzing)
Isova_0420 DNA topoisomerase I
Isova_1060 putative viral-like DNA topoisomerase
Isova_2883 histone family protein DNA-binding protein
Isova_1311 ATP-dependent DNA helicase, RecQ family
Isova_1276 DNA polymerase IV
Isova_1263 SOS-response transcriptional repressor, LexA
Isova_1410 UMUC domain protein DNA-repair protein
Isova_1411 Error-prone DNA polymerase
Isova_1247 Regulatory protein recX
Isova_1261 DEAD/DEAH box helicase domain protein
Isova_1243 DEAD/H associated domain protein
Isova_0378 NUDIX hydrolase
Isova_1361 NUDIX hydrolase
Isova_2283 ribonucleoside-diphosphate reductase, alpha subunit
Isova_2282 Ribonucleoside-diphosphate reductase
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:iva03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Isoptericola variabilis