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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:lmoc03030]
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03410 Base excision repair [PATH:lmoc03410]
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03420 Nucleotide excision repair [PATH:lmoc03420]
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03430 Mismatch repair [PATH:lmoc03430]
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03440 Homologous recombination [PATH:lmoc03440]
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 LMOSLCC5850_1588 recJ; single-stranded-DNA-specific exonuclease
LMOSLCC5850_0045 ssb-1; single-strand binding protein
LMOSLCC5850_2527 ssb-2; single-strand binding protein
LMOSLCC5850_0005 recF; DNA replication and repair protein
LMOSLCC5850_1520 recO; DNA repair protein O
LMOSLCC5850_2715 recR; recombination protein
LMOSLCC5850_1457 recA; recombination protein
LMOSLCC5850_1629 polA; DNA polymerase I
LMOSLCC5850_1596 ruvA; holliday junction DNA helicase
LMOSLCC5850_1595 ruvB; holliday junction DNA helicase
LMOSLCC5850_1873 recG; ATP-dependent DNA helicase RecG
LMOSLCC5850_1571 recD; exodeoxyribonuclease V, alpha chain
LMOSLCC5850_1638 dnaE; DNA polymerase III, alpha subunit
LMOSLCC5850_1379 polC; DNA polymerase III, alpha chain, Gram-positive type
LMOSLCC5850_0002 dnaN; DNA polymerase III, beta subunit
LMOSLCC5850_2717 dnaX; DNA polymerase III, gamma and tau subunits
LMOSLCC5850_1542 holA; DNA polymerase III, delta subunit
LMOSLCC5850_0155 holB; DNA polymerase III, delta subunit
LMOSLCC5850_1886 priA; primosomal protein N' (replication factor Y)
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K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:lmoc03000]
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03021 Transcription machinery [BR:lmoc03021]
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03019 Messenger RNA biogenesis [BR:lmoc03019]
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03041 Spliceosome
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03011 Ribosome [BR:lmoc03011]
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03009 Ribosome biogenesis [BR:lmoc03009]
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03016 Transfer RNA biogenesis [BR:lmoc03016]
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03012 Translation factors [BR:lmoc03012]
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03110 Chaperones and folding catalysts [BR:lmoc03110]
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04131 Membrane trafficking [BR:lmoc04131]
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04121 Ubiquitin system [BR:lmoc04121]
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03051 Proteasome [BR:lmoc03051]
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03032 DNA replication proteins [BR:lmoc03032]
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03036 Chromosome and associated proteins [BR:lmoc03036]
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03400 DNA repair and recombination proteins [BR:lmoc03400]
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LMOSLCC5850_1002 ogt-1; methylated-DNA-protein-cysteine methyltransferase
LMOSLCC5850_0581 phr; deoxyribodipyrimidine photolyase
LMOSLCC5850_0393 ung-1; uracil-DNA glycosylase
LMOSLCC5850_1217 ung-2; uracil-DNA glycosylase
LMOSLCC5850_0930 putative 3-methyladenine DNA glycosylase
LMOSLCC5850_1752 mutY; A/G-specific adenine glycosylase
LMOSLCC5850_1956 nth; endonuclease III
LMOSLCC5850_0150 DNA repair helicase family protein
LMOSLCC5850_1303 MutT/NUDIX family protein
LMOSLCC5850_1686 MutT/NUDIX family hydrolase protein
LMOSLCC5850_2373 MutT/nudix family protein
LMOSLCC5850_1732 MutT/nudix hydrolase family protein
LMOSLCC5850_1754 dUTPase family protein
LMOSLCC5850_0074 ada; Ada regulatory protein
LMOSLCC5850_2311 adaA; methylphosphotriester-DNA alkyltransferase
LMOSLCC5850_2310 ogt-2; methylated-DNA-protein-cysteine S-methyltransferase
LMOSLCC5850_1704 tag; DNA-3-methyladenine glycosylase I
LMOSLCC5850_1628 mutM; formamidopyrimidine-DNA glycosylase
LMOSLCC5850_1844 exoA; exodeoxyribonuclease
LMOSLCC5850_1509 nfo; apurinic endonuclease IV
LMOSLCC5850_1588 recJ; single-stranded-DNA-specific exonuclease
LMOSLCC5850_1820 ligA; DNA ligase, NAD-dependent
LMOSLCC5850_1629 polA; DNA polymerase I
LMOSLCC5850_2491 uvrA; excinuclease ABC, subunit A
LMOSLCC5850_2492 uvrB; excinuclease ABC, subunit B
LMOSLCC5850_1224 uvrC; excinuclease ABC, C subunit
LMOSLCC5850_1821 pcrA; ATP-dependent DNA helicase
LMOSLCC5850_0249 rpoB; DNA-directed RNA polymerase, beta subunit
LMOSLCC5850_0250 rpoC; DNA-directed RNA polymerase, beta' subunit
LMOSLCC5850_2617 rpoA; DNA-directed RNA polymerase, alpha subunit
LMOSLCC5850_2564 rpoE; DNA-directed RNA polymerase, delta subunit
LMOSLCC5850_1888 rpoZ; DNA-directed RNA polymerase, omega subunit
LMOSLCC5850_0208 mfd; transcription-repair coupling factor
LMOSLCC5850_1462 mutS; DNA mismatch repair protein
LMOSLCC5850_1222 DNA mismatch repair protein
LMOSLCC5850_1463 mutL; DNA mismatch repair protein
LMOSLCC5850_1420 xseA; exodeoxyribonuclease VII, large subunit
LMOSLCC5850_1421 xseB; exodeoxyribonuclease VII, small subunit
LMOSLCC5850_1638 dnaE; DNA polymerase III, alpha subunit
LMOSLCC5850_1379 polC; DNA polymerase III, alpha chain, Gram-positive type
LMOSLCC5850_0002 dnaN; DNA polymerase III, beta subunit
LMOSLCC5850_1542 holA; DNA polymerase III, delta subunit
LMOSLCC5850_0155 holB; DNA polymerase III, delta subunit
LMOSLCC5850_2717 dnaX; DNA polymerase III, gamma and tau subunits
LMOSLCC5850_0045 ssb-1; single-strand binding protein
LMOSLCC5850_2527 ssb-2; single-strand binding protein
LMOSLCC5850_1571 recD; exodeoxyribonuclease V, alpha chain
LMOSLCC5850_1457 recA; recombination protein
LMOSLCC5850_1596 ruvA; holliday junction DNA helicase
LMOSLCC5850_1595 ruvB; holliday junction DNA helicase
LMOSLCC5850_1886 priA; primosomal protein N' (replication factor Y)
LMOSLCC5850_1710 sbcC; exonuclease, SbcC family
LMOSLCC5850_1711 sbcD; putative exonuclease SbcD
LMOSLCC5850_0227 radA; DNA repair protein
LMOSLCC5850_0005 recF; DNA replication and repair protein
LMOSLCC5850_1873 recG; ATP-dependent DNA helicase RecG
LMOSLCC5850_1520 recO; DNA repair protein O
LMOSLCC5850_2715 recR; recombination protein
LMOSLCC5850_1427 recN; DNA repair protein
LMOSLCC5850_1953 recU; recombination protein U
LMOSLCC5850_2334 addA; ATP-dependent nuclease, subunit A
LMOSLCC5850_2335 addB; ATP-dependent nuclease, subunit B
LMOSLCC5850_2604 cas1; CRISPR-associated protein
LMOSLCC5850_0007 gyrA; DNA gyrase, A subunit
LMOSLCC5850_0006 gyrB; DNA gyrase, B subunit
LMOSLCC5850_1333 topA; DNA topoisomerase I
LMOSLCC5850_1996 hup; DNA-binding protein
LMOSLCC5850_2770 recQ; ATP-dependent DNA helicase
LMOSLCC5850_2004 putative ATP-dependent DNA helicase
LMOSLCC5850_2037 dinP; DNA-damage-inducible DNA polymerase IV
LMOSLCC5850_2688 putative DNA polymerase IV 2
LMOSLCC5850_1361 lexA; SOS-response transcriptional repressor
LMOSLCC5850_1756 recX; regulatory protein
LMOSLCC5850_1221 DNA polymerase X family protein
LMOSLCC5850_1961 dinG; ATP-dependent helicase
LMOSLCC5850_2222 nrdA; ribonucleoside-diphosphate reductase, alpha subunit
LMOSLCC5850_2221 nrdB; ribonucleoside-diphosphate reductase, beta subunit
LMOSLCC5850_1639 RecJ-like phosphoesterase family protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K03700 recU; recombination protein U
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03565 recX; regulatory protein
K02347 polX; DNA polymerase (family X)
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:lmoc03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Listeria monocytogenes SLCC5850 (serotype 1/2a)