DNA Repair and Recombination Proteins - Methylobacterium sp. 4-46

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
       RecBC pathway proteins
         M446_5543 helicase, RecD/TraA family
         M446_4247 helicase, RecD/TraA family
         M446_0291 recA protein
         M446_0850 Holliday junction DNA helicase RuvA
         M446_1104 Holliday junction DNA helicase RuvB
         M446_3787 Holliday junction DNA helicase RuvB
         M446_2328 crossover junction endodeoxyribonuclease RuvC
         M446_4090 putative bacteriophage-related protein
         M446_0485 primosomal protein N'
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] 
K03553 recA; recombination protein RecA 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] 
       RecFOR pathway proteins
         M446_0291 recA protein
         M446_2597 DNA repair protein RadA
         M446_0003 DNA replication and repair protein RecF
         M446_6310 DEAD/DEAH box helicase domain protein
         M446_3141 single-stranded-DNA-specific exonuclease RecJ
         M446_4316 DNA repair protein RecO
         M446_4241 recombination protein RecR
         M446_6694 DNA repair protein RecN
         M446_0850 Holliday junction DNA helicase RuvA
         M446_1104 Holliday junction DNA helicase RuvB
         M446_3787 Holliday junction DNA helicase RuvB
         M446_2328 crossover junction endodeoxyribonuclease RuvC
         M446_4090 putative bacteriophage-related protein
K03553 recA; recombination protein RecA 
K04485 radA; DNA repair protein RadA/Sms 
K03629 recF; DNA replication and repair protein RecF 
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] 
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
K03584 recO; DNA repair protein RecO (recombination protein O) 
K06187 recR; recombination protein RecR 
K03631 recN; DNA repair protein RecN (Recombination protein N) 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
       AddAB pathway proteins
       Other HR factor
       Archaeal homologous recombinant proteins
     NHEJ (non-homologous end-joining)
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024