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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:mex03030]
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03410 Base excision repair [PATH:mex03410]
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 Mext_0586 endonuclease III
Mext_3625 DNA-(apurinic or apyrimidinic site) lyase
Mext_2718 HhH-GPD family protein
Mext_1473 Uracil-DNA glycosylase superfamily
Mext_3180 A/G-specific adenine glycosylase
Mext_0935 DNA-3-methyladenine glycosylase
Mext_4046 formamidopyrimidine-DNA glycosylase
Mext_2913 AlkA domain protein
Mext_0188 HhH-GPD family protein
Mext_4305 DNA-3-methyladenine glycosylase I
Mext_2306 Uracil-DNA glycosylase superfamily
Mext_4246 phage SPO1 DNA polymerase-related protein
Mext_2687 Uracil-DNA glycosylase superfamily
Mext_1956 exodeoxyribonuclease III Xth
Mext_4030 exodeoxyribonuclease III Xth
Mext_2471 DNA polymerase I
Mext_2762 single-stranded-DNA-specific exonuclease RecJ
Mext_4642 DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:mex03420]
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03430 Mismatch repair [PATH:mex03430]
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03440 Homologous recombination [PATH:mex03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:mex03000]
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03021 Transcription machinery [BR:mex03021]
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03019 Messenger RNA biogenesis [BR:mex03019]
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03041 Spliceosome
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03011 Ribosome [BR:mex03011]
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03009 Ribosome biogenesis [BR:mex03009]
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03016 Transfer RNA biogenesis [BR:mex03016]
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03012 Translation factors [BR:mex03012]
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03110 Chaperones and folding catalysts [BR:mex03110]
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04131 Membrane trafficking [BR:mex04131]
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04121 Ubiquitin system [BR:mex04121]
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03051 Proteasome [BR:mex03051]
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03032 DNA replication proteins [BR:mex03032]
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03036 Chromosome and associated proteins [BR:mex03036]
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03400 DNA repair and recombination proteins [BR:mex03400]
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Mext_2531 Deoxyribodipyrimidine photo-lyase
Mext_1473 Uracil-DNA glycosylase superfamily
Mext_0935 DNA-3-methyladenine glycosylase
Mext_3180 A/G-specific adenine glycosylase
Mext_0586 endonuclease III
Mext_3625 DNA-(apurinic or apyrimidinic site) lyase
Mext_2718 HhH-GPD family protein
Mext_0312 mutator MutT protein
Mext_4299 NUDIX hydrolase
Mext_3969 NUDIX hydrolase
Mext_1524 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Mext_4318 methylated-DNA--protein-cysteine methyltransferase
Mext_2306 Uracil-DNA glycosylase superfamily
Mext_4246 phage SPO1 DNA polymerase-related protein
Mext_2687 Uracil-DNA glycosylase superfamily
Mext_2913 AlkA domain protein
Mext_0188 HhH-GPD family protein
Mext_4305 DNA-3-methyladenine glycosylase I
Mext_4046 formamidopyrimidine-DNA glycosylase
Mext_1956 exodeoxyribonuclease III Xth
Mext_4030 exodeoxyribonuclease III Xth
Mext_2472 Deoxyribonuclease V
Mext_2762 single-stranded-DNA-specific exonuclease RecJ
Mext_4642 DNA ligase, NAD-dependent
Mext_2471 DNA polymerase I
Mext_3891 excinuclease ABC, A subunit
Mext_0207 ABC transporter related
Mext_4055 excinuclease ABC, B subunit
Mext_2878 excinuclease ABC, C subunit
Mext_0322 UvrD/REP helicase
Mext_4017 DNA-directed RNA polymerase, beta subunit
Mext_4018 DNA-directed RNA polymerase, beta' subunit
Mext_2176 DNA-directed RNA polymerase, alpha subunit
Mext_3197 DNA-directed RNA polymerase, omega subunit
Mext_4163 transcription-repair coupling factor
Mext_1298 DEAD/DEAH box helicase domain protein
Mext_4282 DNA mismatch repair protein MutS
Mext_4265 DNA mismatch repair protein MutL
Mext_3873 exodeoxyribonuclease VII, large subunit
Mext_4308 exodeoxyribonuclease VII, small subunit
Mext_1048 DNA polymerase III, alpha subunit
Mext_0002 DNA polymerase III, beta subunit
Mext_4656 DNA polymerase III chi subunit HolC
Mext_1587 DNA polymerase III, delta subunit
Mext_4190 DNA-directed DNA polymerase
Mext_1485 DNA polymerase III, epsilon subunit
Mext_0325 Exonuclease RNase T and DNA polymerase III
Mext_1861 DNA polymerase III, subunits gamma and tau
Mext_2243 single-strand binding protein
Mext_0009 helicase, RecD/TraA family
Mext_2601 recA protein
Mext_0964 Holliday junction DNA helicase RuvA
Mext_4768 Holliday junction DNA helicase RuvB
Mext_0962 crossover junction endodeoxyribonuclease RuvC
Mext_2442 hypothetical protein
Mext_1010 primosomal protein N'
Mext_0305 SMC domain protein
Mext_0304 nuclease SbcCD, D subunit
Mext_3936 DNA repair protein RadA
Mext_0003 DNA replication and repair protein RecF
Mext_4161 DEAD/DEAH box helicase domain protein
Mext_1051 DNA repair protein RecO
Mext_1638 recombination protein RecR
Mext_2954 DNA repair protein RecN
Mext_4440 double-strand break repair helicase AddA
Mext_4439 double-strand break repair protein AddB
Mext_2821 helicase domain protein
Mext_4415 protein of unknown function DUF853 NPT hydrolase putative
Mext_4567 DNA gyrase, A subunit
Mext_2577 DNA gyrase, B subunit
Mext_3308 DNA topoisomerase I
Mext_1974 putative DNA topoisomerase I
Mext_2055 histone family protein DNA-binding protein
Mext_0179 integration host factor, beta subunit
Mext_0006 ATP-dependent DNA helicase RecQ
Mext_4721 DNA-directed DNA polymerase
Mext_3517 DNA-directed DNA polymerase
Mext_0361 peptidase S24 and S26 domain protein
Mext_4683 LexA repressor
Mext_4574 conserved hypothetical protein
Mext_4575 conserved hypothetical protein
Mext_4576 DNA polymerase III, alpha subunit
Mext_2303 hypothetical protein
Mext_3154 DEAD/H associated domain protein
Mext_1102 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
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K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K19789 radD; DNA repair protein RadD
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K04764 ihfA; integration host factor subunit alpha
K05788 ihfB; integration host factor subunit beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K03502 umuC; DNA polymerase V
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
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03029 Mitochondrial biogenesis [BR:mex03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Methylorubrum extorquens PA1