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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:mgi03030]
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03410 Base excision repair [PATH:mgi03410]
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 Mflv_1373 endonuclease III
Mflv_4215 uracil-DNA glycosylase
Mflv_1438 HhH-GPD family protein
Mflv_3514 DNA-3-methyladenine glycosylase
Mflv_1852 DNA-formamidopyrimidine glycosylase
Mflv_4191 DNA-(apurinic or apyrimidinic site) lyase
Mflv_4811 Formamidopyrimidine-DNA glycolase
Mflv_2582 Formamidopyrimidine-DNA glycolase
Mflv_2326 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II
Mflv_2189 DNA-3-methyladenine glycosylase I
Mflv_2236 Uracil-DNA glycosylase superfamily
Mflv_4873 exodeoxyribonuclease III Xth
Mflv_0177 Exodeoxyribonuclease III
Mflv_5093 Endonuclease IV
Mflv_3564 DNA polymerase I
Mflv_4248 DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:mgi03420]
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03430 Mismatch repair [PATH:mgi03430]
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03440 Homologous recombination [PATH:mgi03440]
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03450 Non-homologous end-joining [PATH:mgi03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:mgi03000]
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03021 Transcription machinery [BR:mgi03021]
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03019 Messenger RNA biogenesis [BR:mgi03019]
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03041 Spliceosome
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03011 Ribosome [BR:mgi03011]
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03009 Ribosome biogenesis [BR:mgi03009]
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03016 Transfer RNA biogenesis [BR:mgi03016]
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03012 Translation factors [BR:mgi03012]
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03110 Chaperones and folding catalysts [BR:mgi03110]
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04131 Membrane trafficking [BR:mgi04131]
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04121 Ubiquitin system [BR:mgi04121]
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03051 Proteasome [BR:mgi03051]
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03032 DNA replication proteins [BR:mgi03032]
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03036 Chromosome and associated proteins [BR:mgi03036]
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03400 DNA repair and recombination proteins [BR:mgi03400]
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Mflv_2325 methylated-DNA--protein-cysteine methyltransferase
Mflv_3909 methylated-DNA--protein-cysteine methyltransferase
Mflv_4086 deoxyribodipyrimidine photo-lyase type I
Mflv_4215 uracil-DNA glycosylase
Mflv_3514 DNA-3-methyladenine glycosylase
Mflv_1438 HhH-GPD family protein
Mflv_1373 endonuclease III
Mflv_1697 type III restriction enzyme, res subunit
Mflv_0303 Endonuclease/exonuclease/phosphatase
Mflv_2154 NUDIX hydrolase
Mflv_0199 8-oxo-dGTPase
Mflv_3620 NUDIX hydrolase
Mflv_5180 NUDIX hydrolase
Mflv_3933 deoxyuridine 5'-triphosphate nucleotidohydrolase
Mflv_3490 deoxyribodipyrimidine photolyase-related protein
Mflv_2236 Uracil-DNA glycosylase superfamily
Mflv_2326 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II
Mflv_2189 DNA-3-methyladenine glycosylase I
Mflv_1852 DNA-formamidopyrimidine glycosylase
Mflv_4191 DNA-(apurinic or apyrimidinic site) lyase
Mflv_4811 Formamidopyrimidine-DNA glycolase
Mflv_2582 Formamidopyrimidine-DNA glycolase
Mflv_4873 exodeoxyribonuclease III Xth
Mflv_0177 Exodeoxyribonuclease III
Mflv_5093 Endonuclease IV
Mflv_4248 DNA ligase, NAD-dependent
Mflv_3564 DNA polymerase I
Mflv_3548 Excinuclease ABC subunit A
Mflv_0951 ABC transporter related protein
Mflv_3556 Excinuclease ABC subunit B
Mflv_3715 Excinuclease ABC subunit C
Mflv_1861 ATP-dependent DNA helicase PcrA
Mflv_4660 ATP-dependent DNA helicase, Rep family
Mflv_4665 UvrD/REP helicase
Mflv_5097 DNA-directed RNA polymerase subunit beta
Mflv_5096 DNA-directed RNA polymerase subunit beta'
Mflv_4970 DNA-directed RNA polymerase subunit alpha
Mflv_3739 DNA-directed RNA polymerase, omega subunit
Mflv_1948 transcription-repair coupling factor
Mflv_2077 Exodeoxyribonuclease VII large subunit
Mflv_2076 Exodeoxyribonuclease VII small subunit
Mflv_3636 DNA polymerase III, alpha subunit
Mflv_0826 DNA polymerase III, beta subunit
Mflv_2664 DNA polymerase III, delta
Mflv_1396 DNA polymerase III, delta prime subunit
Mflv_2958 DNA polymerase III, epsilon subunit
Mflv_1292 DNA polymerase III, epsilon subunit
Mflv_1281 DNA polymerase III, tau subunit
Mflv_2567 single-strand binding protein
Mflv_0875 single-strand binding protein
Mflv_5555 D12 class N6 adenine-specific DNA methyltransferase
Mflv_5130 DNA helicase/exodeoxyribonuclease V, beta subunit
Mflv_5129 DNA helicase/exodeoxyribonuclease V, gamma subunit
Mflv_5131 DNA helicase/exodeoxyribonuclease V, alpha subunit
Mflv_3975 recA protein
Mflv_3825 DNA recombination protein RuvA, domain I
Mflv_3824 Holliday junction DNA helicase subunit RuvB
Mflv_3826 Holliday junction endonuclease RuvC
Mflv_3733 replication restart DNA helicase PriA
Mflv_1442 DNA repair protein RadA
Mflv_0824 DNA replication and repair protein RecF
Mflv_4212 ATP-dependent DNA helicase RecG
Mflv_2713 DNA replication and repair protein RecO
Mflv_1288 DNA replication and repair protein RecR
Mflv_3507 DNA replication and repair protein RecN
Mflv_2544 protein of unknown function DUF853, NPT hydrolase putative
Mflv_1826 Ku domain protein
Mflv_1828 ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module
Mflv_0342 DNA primase, small subunit
Mflv_0821 DNA gyrase subunit A
Mflv_0497 DNA gyrase/topoisomerase IV, subunit A
Mflv_0496 DNA topoisomerase (ATP-hydrolyzing)
Mflv_0822 DNA gyrase subunit B
Mflv_1394 DNA topoisomerase I
Mflv_1967 conserved hypothetical protein
Mflv_4225 bacterial nucleoid protein Hbs
Mflv_1524 ATP-dependent DNA helicase, RecQ-like protein
Mflv_4310 DNA-directed DNA polymerase
Mflv_1122 DNA-directed DNA polymerase
Mflv_3642 DNA-directed DNA polymerase
Mflv_3956 SOS-response transcriptional repressor, LexA
Mflv_4898 conserved hypothetical protein
Mflv_4893 error-prone DNA polymerase, DnaE-like protein
Mflv_3974 regulatory protein RecX
Mflv_2347 helicase c2
Mflv_3199 DEAD/DEAH box helicase domain protein
Mflv_4810 ATP dependent helicase, Lhr family
Mflv_4224 NUDIX hydrolase
Mflv_3501 NUDIX hydrolase
Mflv_2174 NUDIX hydrolase
Mflv_4305 ribonucleoside-diphosphate reductase class Ib alpha subunit
Mflv_3061 putative ribonucleoside-diphosphate reductase (beta chain)
Mflv_4286 ribonucleoside-diphosphate reductase class Ib beta subunit
Mflv_4037 phosphoesterase, RecJ domain protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:mgi03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Mycolicibacterium gilvum PYR-GCK