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KO |
09100 Metabolism
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09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:mgv03030]
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03410 Base excision repair [PATH:mgv03410]
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HFMG94VAA_4813 ung; Uracil-DNA glycosylase
HFMG94VAA_2056 mutM; Formamidopyrimidine-DNA glycosylase
HFMG94VAA_2865 nfo; Endonuclease 4
HFMG94VAA_5400 lig; DNA ligase
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K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:mgv03420]
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03430 Mismatch repair [PATH:mgv03430]
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03440 Homologous recombination [PATH:mgv03440]
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03450 Non-homologous end-joining
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:mgv03000]
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03021 Transcription machinery [BR:mgv03021]
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03019 Messenger RNA biogenesis [BR:mgv03019]
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03041 Spliceosome
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03011 Ribosome [BR:mgv03011]
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03009 Ribosome biogenesis [BR:mgv03009]
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03016 Transfer RNA biogenesis [BR:mgv03016]
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03012 Translation factors [BR:mgv03012]
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03110 Chaperones and folding catalysts [BR:mgv03110]
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04131 Membrane trafficking [BR:mgv04131]
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04121 Ubiquitin system
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03051 Proteasome
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03032 DNA replication proteins [BR:mgv03032]
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03036 Chromosome and associated proteins [BR:mgv03036]
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03400 DNA repair and recombination proteins [BR:mgv03400]
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HFMG94VAA_4813 ung; Uracil-DNA glycosylase
HFMG94VAA_1767 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
HFMG94VAA_2056 mutM; Formamidopyrimidine-DNA glycosylase
HFMG94VAA_2865 nfo; Endonuclease 4
HFMG94VAA_5400 lig; DNA ligase
HFMG94VAA_0627 uvrA; excinuclease ABC subunit A UvrA
HFMG94VAA_0277 uvrB; excinuclease ABC subunit B
HFMG94VAA_2769 hrcA; Heat-inducible transcription repressor hrcA
HFMG94VAA_2966 uvrD; DNA helicase II
HFMG94VAA_1803 rpoB; DNA-directed RNA polymerase subunit beta (RNAP subunit beta)
HFMG94VAA_1825 rpoC; DNA-directed RNA polymerase subunit beta' (RNAP subunit beta')
HFMG94VAA_4898 rpoA; DNA-directed RNA polymerase subunit alpha (RpoA)
HFMG94VAA_5105 rpoE; DNA-directed RNA polymerase subunit delta (RpoE)
HFMG94VAA_2037 dnaE; DNA polymerase III alpha subunit
HFMG94VAA_0675 polC; DNA polymerase III alpha subunit polC/Gram positive-type
HFMG94VAA_5637 dnaN; DNA polymerase III beta subunit DnaN
HFMG94VAA_4416 putative DNA polymerase III delta subunit
HFMG94VAA_5576 holB; DNA polymerase III subunit delta'
HFMG94VAA_4753 dnaX; DNA polymerase III subunits gamma and tau
HFMG94VAA_4839 ssb; Single-stranded DNA-binding protein
HFMG94VAA_3636 recA; RecA (Recombinase A)
HFMG94VAA_4771 ruvA; Holliday junction ATP-dependent DNA helicase ruvA
HFMG94VAA_4765 ruvB; Holliday junction ATP-dependent DNA helicase ruvB
HFMG94VAA_2643 hypothetical protein
HFMG94VAA_3035 putative recombinational DNA repair protein RecO
HFMG94VAA_4742 recR; Recombination protein recR
HFMG94VAA_1053 recU; Holliday junction resolvase recU (Recombination protein U-like protein)
HFMG94VAA_5204 cas1; CRISPR-associated protein Cas1
HFMG94VAA_5606 gyrA; DNA gyrase subunit A
HFMG94VAA_5621 gyrB; DNA gyrase subunit B
HFMG94VAA_4950 hypothetical protein
HFMG94VAA_1058 himA_hup; Histone-like DNA-binding superfamily protein HimA/HU/Integration host factor
HFMG94VAA_3207 himA_hup; histone-like DNA-binding superfamily protein HimA/HU/Integration host factor
HFMG94VAA_4457 dinB; DNA polymerase IV
HFMG94VAA_0330 nrdA; Ribonucleotide-diphosphate reductase subunit alpha
HFMG94VAA_0342 nrdF; Ribonucleoside-diphosphate reductase subunit beta
HFMG94VAA_0266 exopolyphosphatase-related protein
HFMG94VAA_3801 phosphodiesterase
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K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03700 recU; recombination protein U
K15342 cas1; CRISP-associated protein Cas1
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03530 hupB; DNA-binding protein HU-beta
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:mgv03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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