09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:mir03030]
03410 Base excision repair [PATH:mir03410]
OCQ_04010 hypothetical protein OCQ_37670 uracil-DNA glycosylase OCQ_04890 mutY OCQ_29920 3-methyladenine DNA glycosylase OCQ_09470 hypothetical protein OCQ_30570 formamidopyrimidine DNA-glyxosylase OCQ_37410 formamidopyrimidine-DNA glycosylase OCQ_15330 hypothetical protein OCQ_42610 hypothetical protein OCQ_13680 transcriptional regulator, AraC family protein OCQ_12620 DNA-3-methyladenine glycosylase I OCQ_13020 uracil-DNA glycosylase superfamily protein OCQ_40520 hypothetical protein OCQ_47350 exodeoxyribonuclease III OCQ_45080 endonuclease IV OCQ_30650 DNA polymerase I OCQ_38080 NAD-dependent DNA ligase LigA
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
03420 Nucleotide excision repair [PATH:mir03420]
03430 Mismatch repair [PATH:mir03430]
03440 Homologous recombination [PATH:mir03440]
03450 Non-homologous end-joining [PATH:mir03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:mir03000]
03021 Transcription machinery [BR:mir03021]
03019 Messenger RNA biogenesis [BR:mir03019]
03041 Spliceosome
03011 Ribosome [BR:mir03011]
03009 Ribosome biogenesis [BR:mir03009]
03016 Transfer RNA biogenesis [BR:mir03016]
03012 Translation factors [BR:mir03012]
03110 Chaperones and folding catalysts [BR:mir03110]
04131 Membrane trafficking [BR:mir04131]
04121 Ubiquitin system [BR:mir04121]
03051 Proteasome [BR:mir03051]
03032 DNA replication proteins [BR:mir03032]
03036 Chromosome and associated proteins [BR:mir03036]
03400 DNA repair and recombination proteins [BR:mir03400]
OCQ_13670 methylated-DNA--protein-cysteine methyltransferase OCQ_38440 phr protein OCQ_37670 uracil-DNA glycosylase OCQ_29920 3-methyladenine DNA glycosylase OCQ_04890 mutY OCQ_04010 hypothetical protein OCQ_08730 DNA or RNA helicase of superfamily protein II OCQ_12150 hydrolase, NUDIX family protein OCQ_47660 hypothetical protein OCQ_07010 hypothetical protein OCQ_31010 hypothetical protein OCQ_35410 deoxyuridine 5'-triphosphate nucleotidohydrolase OCQ_13020 uracil-DNA glycosylase superfamily protein OCQ_40520 hypothetical protein OCQ_13680 transcriptional regulator, AraC family protein OCQ_12620 DNA-3-methyladenine glycosylase I OCQ_09470 hypothetical protein OCQ_30570 formamidopyrimidine DNA-glyxosylase OCQ_37410 formamidopyrimidine-DNA glycosylase OCQ_15330 hypothetical protein OCQ_42610 hypothetical protein OCQ_47350 exodeoxyribonuclease III OCQ_45080 endonuclease IV OCQ_38080 NAD-dependent DNA ligase LigA OCQ_30650 DNA polymerase I OCQ_19460 ABC transporter related protein OCQ_30420 excinuclease ABC subunit A OCQ_30490 excinuclease ABC subunit B OCQ_33200 excinuclease ABC subunit C OCQ_09510 ATP-dependent DNA helicase PcrA OCQ_41170 hypothetical protein OCQ_41130 hypothetical protein OCQ_45100 DNA-directed RNA polymerase subunit beta OCQ_45090 DNA-directed RNA polymerase subunit beta OCQ_44000 DNA-directed RNA polymerase subunit alpha OCQ_33430 DNA-directed RNA polymerase subunit omega OCQ_10590 hypothetical protein OCQ_11370 exodeoxyribonuclease VII large subunit OCQ_11360 exodeoxyribonuclease VII small subunit OCQ_31360 DNA polymerase III subunit alpha OCQ_00020 DNA polymerase III subunit beta OCQ_15870 hypothetical protein OCQ_04490 DNA-directed DNA polymerase III subunit delta OCQ_03460 DNA polymerase III subunit epsilon OCQ_21600 hypothetical protein OCQ_03360 DNA polymerase III subunit gamma and tau OCQ_00710 single-stranded DNA-binding protein OCQ_15190 hypothetical protein OCQ_45500 exodeoxyribonuclease V, beta subunit OCQ_45490 exodeoxyribonuclease V, gamma subunit OCQ_45510 hypothetical protein OCQ_35760 recombinase A OCQ_34240 holliday junction DNA helicase motor protein OCQ_34230 holliday junction DNA helicase RuvB OCQ_34250 holliday junction resolvase OCQ_33360 primosome assembly protein PriA OCQ_04930 DNA repair protein RadA OCQ_00030 recombination protein F OCQ_37560 ATP-dependent DNA helicase RecG OCQ_18840 DNA repair protein RecO OCQ_03420 recombination protein RecR OCQ_29840 DNA repair protein RecN OCQ_14980 ATP-binding protein OCQ_09360 ku protein OCQ_09380 ATP-dependent DNA ligase OCQ_30560 putative DNA ligase-like protein OCQ_00060 DNA gyrase, A subunit OCQ_00050 DNA gyrase subunit B OCQ_04470 DNA topoisomerase I OCQ_40500 hypothetical protein OCQ_37760 hypothetical protein OCQ_01770 DNA polymerase IV OCQ_31450 DNA polymerase IV OCQ_35640 LexA repressor OCQ_43380 hypothetical protein OCQ_43280 error-prone DNA polymerase OCQ_35750 recombination regulator RecX OCQ_13810 deaD/DeaH family protein helicase OCQ_42600 DEAD/DEAH box helicase OCQ_37750 mutT1 OCQ_29800 hypothetical protein OCQ_13350 nudix hydrolase OCQ_38690 ribonucleotide-diphosphate reductase subunit alpha OCQ_38610 ribonucleotide-diphosphate reductase subunit beta OCQ_49510 ribonucleotide-diphosphate reductase subunit beta OCQ_46980 ribonucleotide-diphosphate reductase subunit beta OCQ_36410 hypothetical protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:mir03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Mycobacterium paraintracellulare KEGG Orthology (KO) - Mycobacterium paraintracellulare