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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:mmc03030]
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03410 Base excision repair [PATH:mmc03410]
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 Mmcs_4816 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
Mmcs_1933 Uracil-DNA glycosylase
Mmcs_4746 HhH-GPD
Mmcs_2956 DNA-3-methyladenine glycosylase
Mmcs_1950 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
Mmcs_4336 DNA-formamidopyrimidine glycosylase
Mmcs_1265 DNA-formamidopyrimidine glycosylase
Mmcs_3870 DNA-3-methyladenine glycosylase II
Mmcs_4003 DNA-3-methyladenine glycosylase I
Mmcs_2993 phage SPO1 DNA polymerase-related protein
Mmcs_3957 Uracil-DNA glycosylase superfamily
Mmcs_0026 Uracil-DNA glycosylase superfamily
Mmcs_5490 Uracil-DNA glycosylase superfamily
Mmcs_0567 Exodeoxyribonuclease III
Mmcs_1211 exodeoxyribonuclease III (xth)
Mmcs_0972 Endonuclease IV
Mmcs_3011 DNA polymerase I
Mmcs_1881 DNA ligase, NAD-dependent
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
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03420 Nucleotide excision repair [PATH:mmc03420]
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03430 Mismatch repair [PATH:mmc03430]
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03440 Homologous recombination [PATH:mmc03440]
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03450 Non-homologous end-joining [PATH:mmc03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:mmc03000]
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03021 Transcription machinery [BR:mmc03021]
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03019 Messenger RNA biogenesis [BR:mmc03019]
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03041 Spliceosome
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03011 Ribosome [BR:mmc03011]
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03009 Ribosome biogenesis [BR:mmc03009]
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03016 Transfer RNA biogenesis [BR:mmc03016]
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03012 Translation factors [BR:mmc03012]
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03110 Chaperones and folding catalysts [BR:mmc03110]
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04131 Membrane trafficking [BR:mmc04131]
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04121 Ubiquitin system [BR:mmc04121]
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03051 Proteasome [BR:mmc03051]
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03032 DNA replication proteins [BR:mmc03032]
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03036 Chromosome and associated proteins [BR:mmc03036]
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03400 DNA repair and recombination proteins [BR:mmc03400]
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Mmcs_2223 methylated-DNA--protein-cysteine methyltransferase
Mmcs_3871 methylated-DNA--protein-cysteine methyltransferase
Mmcs_2038 deoxyribodipyrimidine photo-lyase type I
Mmcs_1933 Uracil-DNA glycosylase
Mmcs_2956 DNA-3-methyladenine glycosylase
Mmcs_4746 HhH-GPD
Mmcs_4816 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
Mmcs_4485 type III restriction enzyme, res subunit
Mmcs_4043 NUDIX hydrolase
Mmcs_0543 NUDIX hydrolase
Mmcs_3069 NUDIX hydrolase
Mmcs_2191 deoxyuridine 5'-triphosphate nucleotidohydrolase
Mmcs_2924 deoxyribodipyrimidine photolyase-related protein
Mmcs_2993 phage SPO1 DNA polymerase-related protein
Mmcs_3957 Uracil-DNA glycosylase superfamily
Mmcs_0026 Uracil-DNA glycosylase superfamily
Mmcs_5490 Uracil-DNA glycosylase superfamily
Mmcs_3870 DNA-3-methyladenine glycosylase II
Mmcs_4003 DNA-3-methyladenine glycosylase I
Mmcs_1950 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase
Mmcs_4336 DNA-formamidopyrimidine glycosylase
Mmcs_1265 DNA-formamidopyrimidine glycosylase
Mmcs_0567 Exodeoxyribonuclease III
Mmcs_1211 exodeoxyribonuclease III (xth)
Mmcs_0972 Endonuclease IV
Mmcs_1881 DNA ligase, NAD-dependent
Mmcs_3011 DNA polymerase I
Mmcs_0603 ABC transporter related protein
Mmcs_2988 Excinuclease ABC subunit A
Mmcs_3001 Excinuclease ABC subunit B
Mmcs_2395 Excinuclease ABC subunit C
Mmcs_3812 Excinuclease ABC, C subunit-like protein
Mmcs_4330 ATP-dependent DNA helicase PcrA
Mmcs_1409 ATP-dependent DNA helicase, Rep family
Mmcs_1404 UvrD/REP helicase
Mmcs_0969 DNA-directed RNA polymerase subunit beta
Mmcs_0970 DNA-directed RNA polymerase subunit beta'
Mmcs_1113 DNA-directed RNA polymerase subunit alpha
Mmcs_2371 DNA-directed RNA polymerase, omega subunit
Mmcs_4245 transcription-repair coupling factor
Mmcs_4107 Exodeoxyribonuclease VII large subunit
Mmcs_4108 Exodeoxyribonuclease VII small subunit
Mmcs_3087 error-prone DNA polymerase, DnaE-like / DNA polymerase III, alpha subunit
Mmcs_0002 DNA polymerase III, beta subunit
Mmcs_3511 DNA polymerase III, delta subunit
Mmcs_4794 DNA polymerase III, delta prime subunit
Mmcs_4900 DNA polymerase III, epsilon subunit
Mmcs_3289 DNA polymerase III, epsilon subunit
Mmcs_5482 DNA polymerase III, epsilon subunit
Mmcs_4909 DNA polymerase III, tau subunit
Mmcs_5369 single-strand binding protein
Mmcs_3616 single-strand binding protein
Mmcs_0818 DNA mismatch endonuclease vsr
Mmcs_0900 DNA helicase/exodeoxyribonuclease V, beta subunit
Mmcs_0901 DNA helicase/exodeoxyribonuclease V, gamma subunit
Mmcs_0897 DNA helicase/exodeoxyribonuclease V, alpha subunit
Mmcs_2147 recA protein
Mmcs_2266 Holliday junction DNA helicase subunit RuvA
Mmcs_2267 Holliday junction DNA helicase subunit RuvB
Mmcs_2265 Holliday junction endonuclease RuvC
Mmcs_2380 replication restart DNA helicase PriA
Mmcs_4742 DNA repair protein RadA
Mmcs_0004 DNA replication and repair protein RecF
Mmcs_1936 ATP-dependent DNA helicase RecG
Mmcs_3450 DNA replication and repair protein RecO
Mmcs_4903 DNA replication and repair protein RecR
Mmcs_2949 DNA replication and repair protein RecN
Mmcs_3639 protein of unknown function DUF853, NPT hydrolase putative
Mmcs_4361 DNA end-binding protein Ku
Mmcs_4352 ATP-dependent DNA ligase LigD ligase module / ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module
Mmcs_5528 DNA ligase (ATP)
Mmcs_5343 DNA gyrase/topoisomerase IV, subunit A
Mmcs_0007 DNA gyrase subunit A
Mmcs_0006 DNA gyrase subunit B
Mmcs_5342 DNA topoisomerase (ATP-hydrolyzing)
Mmcs_4796 DNA topoisomerase I
Mmcs_1279 conserved hypothetical protein
Mmcs_1923 bacterial nucleoid protein Hbs
Mmcs_4657 ATP-dependent DNA helicase, RecQ-like protein
Mmcs_2506 ATP-dependent DNA helicase, RecQ family
Mmcs_5059 DNA-directed DNA polymerase
Mmcs_1812 DNA-directed DNA polymerase
Mmcs_3095 DNA-directed DNA polymerase
Mmcs_2168 SOS-response transcriptional repressor, LexA
Mmcs_1175 conserved hypothetical protein
Mmcs_1183 error-prone DNA polymerase, DnaE-like protein
Mmcs_2148 regulatory protein RecX
Mmcs_3855 Helicase c2
Mmcs_1267 ATP dependent helicase, Lhr family
Mmcs_1924 NUDIX hydrolase
Mmcs_2943 NUDIX hydrolase
Mmcs_4021 NUDIX hydrolase
Mmcs_1085 Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Mmcs_1817 ribonucleoside-diphosphate reductase class Ib alpha subunit
Mmcs_1828 ribonucleoside-diphosphate reductase class Ib beta subunit
Mmcs_4214 putative ribonucleoside-diphosphate reductase (beta chain) NrdB (ribonucleotide reductase small chain)
Mmcs_2084 phosphoesterase, RecJ-like protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K02335 polA; DNA polymerase I [EC:2.7.7.7]
K03701 uvrA; excinuclease ABC subunit A
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K05984 cho; excinuclease Cho [EC:3.1.25.-]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K04485 radA; DNA repair protein RadA/Sms
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14161 imuB; protein ImuB
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
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03029 Mitochondrial biogenesis [BR:mmc03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Mycobacterium sp. MCS