09100 Metabolism
09120 Genetic Information Processing
09121 Transcription
09122 Translation
09123 Folding, sorting and degradation
09124 Replication and repair
03030 DNA replication [PATH:mte03030]
03410 Base excision repair [PATH:mte03410]
03420 Nucleotide excision repair [PATH:mte03420]
03430 Mismatch repair [PATH:mte03430]
03440 Homologous recombination [PATH:mte03440]
CCDC5079_2287 hypothetical protein CCDC5079_0050 single-stranded DNA-binding protein CCDC5079_0004 recombination protein F CCDC5079_2184 hypothetical protein CCDC5079_3447 recombination protein RecR CCDC5079_2512 recA protein (recombinase A) CCDC5079_1505 DNA polymerase I CCDC5079_2392 ruvA, Holliday junction DNA helicase RuvA CCDC5079_2391 Holliday junction DNA helicase RuvB CCDC5079_2393 Holliday junction resolvase CCDC5079_2730 ATP-dependent DNA helicase RecG CCDC5079_0587 exonuclease V beta chain CCDC5079_0588 exonuclease V gamma chain CCDC5079_0586 exonuclease V alpha subunit recD CCDC5079_1442 DNA polymerase III subunit alpha CCDC5079_0003 DNA polymerase III subunit beta CCDC5079_3453 DNA polymerase III subunits gamma and tau CCDC5079_2230 hypothetical protein CCDC5079_3377 DNA polymerase III subunit delta' CCDC5079_3443 DNA polymerase III subunit epsilon CCDC5079_2027 hypothetical protein CCDC5079_1301 primosomal protein N priA (replication factor Y)
K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03629 recF; DNA replication and repair protein RecF K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03553 recA; recombination protein RecA K02335 polA; DNA polymerase I [EC:2.7.7.7] K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
03450 Non-homologous end-joining [PATH:mte03450]
03460 Fanconi anemia pathway
09126 Chromosome
09125 Information processing in viruses
09130 Environmental Information Processing
09140 Cellular Processes
09150 Organismal Systems
09160 Human Diseases
09180 Brite Hierarchies
09181 Protein families: metabolism
09182 Protein families: genetic information processing
03000 Transcription factors [BR:mte03000]
03021 Transcription machinery [BR:mte03021]
03019 Messenger RNA biogenesis [BR:mte03019]
03041 Spliceosome
03011 Ribosome [BR:mte03011]
03009 Ribosome biogenesis [BR:mte03009]
03016 Transfer RNA biogenesis [BR:mte03016]
03012 Translation factors [BR:mte03012]
03110 Chaperones and folding catalysts [BR:mte03110]
04131 Membrane trafficking [BR:mte04131]
04121 Ubiquitin system [BR:mte04121]
03051 Proteasome [BR:mte03051]
03032 DNA replication proteins [BR:mte03032]
03036 Chromosome and associated proteins [BR:mte03036]
03400 DNA repair and recombination proteins [BR:mte03400]
CCDC5079_1218 methylated-DNA--protein-cysteine methyltransferase CCDC5079_2732 ung, uracil-DNA glycosylase CCDC5079_1564 3-methyladenine DNA glycosylase mpg CCDC5079_3330 adenine glycosylase MutY CCDC5079_3404 ultraviolet N-glycosylase/AP lyase CCDC5079_0797 DNA helicase ercc3 CCDC5079_1072 mutator protein mutT CCDC5079_0387 mutator protein mutT3 CCDC5079_2480 deoxyuridine 5-triphosphate nucleotidohydrolase dut CCDC5079_1163 hypothetical protein CCDC5079_1219 bifunctional methylated-DNA--protein-cysteine methyltransferase/O-6-methylguanine-DNA transcription regulator CCDC5079_1119 DNA-3-methyladenine glycosylase I CCDC5079_2684 formamidopyrimidine-DNA glycosylase fpg CCDC5079_0872 hypothetical formamidopyrimidine-DNA glycosylase CCDC5079_2274 DNA glycosylase CCDC5079_3045 endonuclease VIII CCDC5079_0399 exodeoxyribonuclease III protein xthA CCDC5079_0622 endonuclease IV CCDC5079_2769 NAD-dependent DNA ligase LigA CCDC5079_1505 DNA polymerase I CCDC5079_1515 excinuclease ABC subunit A uvrA CCDC5079_1509 excinuclease ABC subunit B uvrB CCDC5079_1319 excinuclease ABC subunit C CCDC5079_2949 ATP-dependent DNA helicase II uvrD2 CCDC5079_2953 ATP-dependent DNA helicase CCDC5079_0875 ATP-dependent helicase PcrA CCDC5079_0619 DNA-directed RNA polymerase subunit beta rpoB CCDC5079_0620 DNA-directed RNA polymerase subunit beta' CCDC5079_3202 DNA-directed RNA polymerase subunit alpha CCDC5079_1290 DNA-directed RNA polymerase subunit omega CCDC5079_0943 transcription-repair coupling factor mfd CCDC5079_1023 exodeoxyribonuclease VII (large subunit) xseA CCDC5079_1442 DNA polymerase III subunit alpha CCDC5079_0003 DNA polymerase III subunit beta CCDC5079_2230 hypothetical protein CCDC5079_3377 DNA polymerase III subunit delta' CCDC5079_3443 DNA polymerase III subunit epsilon CCDC5079_2027 hypothetical protein CCDC5079_3453 DNA polymerase III subunits gamma and tau CCDC5079_2287 hypothetical protein CCDC5079_0050 single-stranded DNA-binding protein CCDC5079_0587 exonuclease V beta chain CCDC5079_0588 exonuclease V gamma chain CCDC5079_0586 exonuclease V alpha subunit recD CCDC5079_2512 recA protein (recombinase A) CCDC5079_2392 ruvA, Holliday junction DNA helicase RuvA CCDC5079_2391 Holliday junction DNA helicase RuvB CCDC5079_2393 Holliday junction resolvase CCDC5079_1301 primosomal protein N priA (replication factor Y) CCDC5079_3326 DNA repair protein RadA CCDC5079_0004 recombination protein F CCDC5079_2730 ATP-dependent DNA helicase RecG CCDC5079_2184 hypothetical protein CCDC5079_3447 recombination protein RecR CCDC5079_1571 DNA repair protein recN (recombination protein N) CCDC5079_2314 hypothetical protein CCDC5079_0866 hypothetical protein CCDC5079_0867 ATP-dependent DNA ligase CCDC5079_0007 DNA gyrase subunit A CCDC5079_0006 DNA gyrase subunit B gyrB CCDC5079_3381 DNA topoisomerase I CCDC5079_2742 hypothetical protein CCDC5079_2812 DNA polymerase IV CCDC5079_1433 DNA polymerase IV CCDC5079_2497 repressor lexA CCDC5079_3140 hypothetical protein CCDC5079_3118 error-prone DNA polymerase CCDC5079_2511 recombination regulator RecX CCDC5079_1232 ATP-dependent helicase dinG CCDC5079_3043 ATP-dependent helicase lhr CCDC5079_2741 hydrolase MutT1 CCDC5079_1575 hypothetical protein CCDC5079_2808 ribonucleoside-diphosphate reductase (alpha chain) nrdE CCDC5079_0535 ribonucleoside-diphosphate reductase large subunit NrdZ CCDC5079_2805 ribonucleotide-diphosphate reductase subunit beta CCDC5079_0218 ribonucleotide-diphosphate reductase subunit beta CCDC5079_1830 ribonucleotide-diphosphate reductase subunit beta CCDC5079_2598 hypothetical protein
K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] K01520 dut; dUTP diphosphatase [EC:3.6.1.23] K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] K02335 polA; DNA polymerase I [EC:2.7.7.7] K03701 uvrA; excinuclease ABC subunit A K03702 uvrB; excinuclease ABC subunit B K03703 uvrC; excinuclease ABC subunit C K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] K03111 ssb; single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] K03553 recA; recombination protein RecA K03550 ruvA; holliday junction DNA helicase RuvA K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] K04485 radA; DNA repair protein RadA/Sms K03629 recF; DNA replication and repair protein RecF K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] K03584 recO; DNA repair protein RecO (recombination protein O) K06187 recR; recombination protein RecR K03631 recN; DNA repair protein RecN (Recombination protein N) K06915 herA; DNA double-strand break repair helicase HerA and related ATPase K10979 ku; DNA end-binding protein Ku K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] K03168 topA; DNA topoisomerase I [EC:5.6.2.1] K03530 hupB; DNA-binding protein HU-beta K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K02346 dinB; DNA polymerase IV [EC:2.7.7.7] K01356 lexA; repressor LexA [EC:3.4.21.88] K14161 imuB; protein ImuB K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] K03565 recX; regulatory protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
03029 Mitochondrial biogenesis [BR:mte03029]
09183 Protein families: signaling and cellular processes
09185 Viral protein families
09184 RNA family
09190 Not Included in Pathway or Brite
KEGG Orthology (KO) - Mycobacterium tuberculosis CCDC5079 KEGG Orthology (KO) - Mycobacterium tuberculosis CCDC5079