Patl_1648 sulfate adenylyltransferase subunit 1
       Patl_1651 sulfate adenylyltransferase subunit 2
       Patl_1650 adenylylsulfate kinase
       Patl_1649 3'(2'),5'-bisphosphate nucleotidase
       Patl_0137 3'(2'),5'-bisphosphate nucleotidase
       Patl_4037 phosphoadenylylsulfate reductase (thioredoxin)
       Patl_4039 sulfite reductase (NADPH) alpha subunit
       Patl_4038 sulfite reductase (NADPH) beta subunit
       Patl_2221 3-mercaptopyruvate sulfurtransferase
       Patl_0063 thiosulfate sulfurtransferase
       Patl_1236 serine O-acetyltransferase
       Patl_4078 serine O-acetyltransferase
       Patl_0400 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit
       Patl_2517 cysteine synthase
       Patl_1882 cysteine synthase
       Patl_3021 homoserine O-succinyltransferase
       Patl_1978 homoserine O-acetyltransferase
       Patl_1913 AMP-dependent synthetase and ligase
       Patl_0656 acyl-CoA dehydrogenase-like protein
       Patl_1918 acyl-CoA dehydrogenase-like protein
       Patl_1408 acyl-CoA dehydrogenase-like protein

K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K01738 cysK; cysteine synthase [EC:2.5.1.47]
K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]

       Patl_3282 metal dependent phosphohydrolase
       Patl_2919 glutamyl-tRNA synthetase
       Patl_1276 prolyl-tRNA synthetase
       Patl_3178 Isoleucyl-tRNA synthetase
       Patl_1566 leucyl-tRNA synthetase
       Patl_1897 methionyl-tRNA synthetase
       Patl_2184 glutaminyl-tRNA synthetase
       Patl_1359 arginyl-tRNA synthetase
       Patl_1361 lysyl-tRNA synthetase
       Patl_2948 aspartyl-tRNA synthetase
       Patl_3015 alanyl-tRNA synthetase
       Patl_1879 asparaginyl-tRNA synthetase
       Patl_2499 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
       Patl_2456 seryl-tRNA synthetase
       Patl_1888 cysteinyl-tRNA synthetase
       Patl_3564 valyl-tRNA synthetase
       Patl_3125 histidyl-tRNA synthetase
       Patl_2495 phenylalanyl-tRNA synthetase, alpha subunit
       Patl_2494 phenylalanyl-tRNA synthetase beta subunit
       Patl_0514 tyrosyl-tRNA synthetase
       Patl_0658 tryptophanyl-tRNA synthetase
       Patl_3950 D-tyrosyl-tRNA(Tyr) deacylase
       Patl_1047 histidine triad (HIT) protein
       Patl_0078 tRNA (guanine-N(7)-)-methyltransferase
       Patl_3929 putative methyltransferase
       Patl_1277 protein of unknown function UPF0066
       Patl_1604 tRNA pseudouridine synthase A
       Patl_1697 tRNA pseudouridine synthase B
       Patl_3859 Pseudouridylate synthase
       Patl_1238 cysteine desulfurase IscS
       Patl_0028 translation factor SUA5
       Patl_3977 tRNA delta(2)-isopentenylpyrophosphate transferase
       Patl_4310 tRNA modification GTPase trmE
       Patl_4306 glucose inhibited division protein A
       Patl_1649 3'(2'),5'-bisphosphate nucleotidase
       Patl_0137 3'(2'),5'-bisphosphate nucleotidase
       Patl_4314 ribonuclease P protein component
       Patl_R0014 rnpB; RNase_P_RNA
       Patl_1399 RNAse T
       Patl_4282 RNAse PH
       Patl_2803 ribonuclease D
       Patl_0487 2'-5' RNA ligase
       Patl_1296 ABC transporter related protein
       Patl_0009 glycyl-tRNA synthetase alpha chain
       Patl_0008 glycyl-tRNA synthetase beta chain
       Patl_3936 Glutamate--tRNA ligase
       Patl_3500 ybaK/ebsC protein
       Patl_3115 tRNA-adenosine deaminase
       Patl_4051 tRNA-U16,U17-dihydrouridine synthase
       Patl_0270 tRNA-U20-dihydrouridine synthase
       Patl_2915 tRNA-U20a,U20b-dihydrouridine synthase
       Patl_2206 tRNA-i(6)A37 thiotransferase enzyme MiaB
       Patl_4027 putative methyltransferase
       Patl_4026 putative methyltransferase
       Patl_2177 Methyltransferase type 11
       Patl_4030 tRNA (uracil-5-)-methyltransferase
       Patl_1579 tRNA (Guanine37-N(1)-) methyltransferase
       Patl_0351 tRNA (guanosine-2'-O-)-methyltransferase
       Patl_1235 RNA methyltransferase, TrmH family, group 1
       Patl_0990 RNA methyltransferase, TrmH family, group 2
       Patl_3970 methyltransferase small
       Patl_3184 tRNA pseudouridine synthase C
       Patl_2328 pseudouridine synthase
       Patl_3831 ribosomal large subunit pseudouridine synthase A
       Patl_1363 pseudouridine synthase Rlu family protein, TIGR01621
       Patl_1630 Pseudouridylate synthase
       Patl_2379 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
       Patl_2064 tRNA s(2)C-32 sulfurtransferase
       Patl_4280 SirA-like protein
       Patl_2454 DsrH family protein
       Patl_2453 DsrE-like protein
       Patl_2452 DsrE-like protein
       Patl_2455 DsrC-like protein
       Patl_1240 iron-sulfur cluster assembly protein IscA
       Patl_3160 glycine cleavage T protein (aminomethyl transferase)
       Patl_1614 tRNA-hydroxylase
       Patl_3384 protein of unknown function DUF752
       Patl_1227 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
       Patl_2961 preQ(0) biosynthesis protein QueC
       Patl_2960 Radical SAM
       Patl_3193 GTP cyclohydrolase I
       Patl_3972 putative iron-sulfur cluster binding protein
       Patl_1228 tRNA-guanine transglycosylase
       Patl_1266 tRNA(Ile)-lysidine synthetase
       Patl_1341 tRNA(Met)-cytidine N(4)-acetyltransferase
       Patl_2808 peptidase M22, glycoprotease
       Patl_1042 O-sialoglycoprotein endopeptidase
       Patl_3974 protein of unknown function UPF0079
       Patl_1791 UBA/THIF-type NAD/FAD binding fold familiy
       Patl_0994 RNAse R
       Patl_3785 RNAse R
       Patl_1632 Polyribonucleotide nucleotidyltransferase

K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
K01978 rnpB; M1 RNA
K03683 rnt; ribonuclease T [EC:3.1.13.-]
K00989 rph; ribonuclease PH [EC:2.7.7.56]
K03684 rnd; ribonuclease D [EC:3.1.13.5]
K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
K06020 ettA; energy-dependent translational throttle protein EttA
K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
K07237 tusB; tRNA 2-thiouridine synthesizing protein B
K07236 tusC; tRNA 2-thiouridine synthesizing protein C
K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
K13628 iscA; iron-sulfur cluster assembly protein
K06980 ygfZ; tRNA-modifying protein YgfZ
K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K12573 rnr; ribonuclease R [EC:3.1.13.1]
K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]