KEGG Orthology (KO) - Pseudomonas protegens Pf-5

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
     00250 Alanine, aspartate and glutamate metabolism [PATH:pfl00250]
       PFL_2138 aminotransferase
       PFL_1609 aminotransferase family protein
       PFL_1447 nadB; L-aspartate oxidase
       PFL_6140 asparaginase
       PFL_2099 ansB; glutamin-(asparagin-)ase
       PFL_4333 asnB; asparagine synthase (glutamine-hydrolyzing)
       PFL_4948 hydrolase, carbon-nitrogen family
       PFL_4247 aminotransferase, class I/II
       PFL_6128 aspA; aspartate ammonia-lyase
       PFL_4853 argG; argininosuccinate synthase
       PFL_6004 argH; argininosuccinate lyase
       PFL_0571 purA; adenylosuccinate synthase
       PFL_3893 purB; adenylosuccinate lyase
       PFL_5833 pyrB; aspartate carbamoyltransferase
       PFL_0186 gabT; 4-aminobutyrate transaminase
       PFL_4884 aminotransferase, class III
       PFL_0185 gabD; succinate-semialdehyde dehydrogenase
       PFL_3831 yneI; succinate semialdehyde dehydrogenase, NAD+-dependent
       PFL_0453 gltB; glutamate synthase, large subunit
       PFL_0454 gltD; glutamate synthase, small subunit
       PFL_2741 NAD-glutamate dehydrogenase
       PFL_5343 gdhA; NADP-specific glutamate dehydrogenase
       PFL_0495 putA; proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase
       PFL_4488 glutamate--ammonia ligase
       PFL_2245 glnA_1; glutamate--ammonia ligase
       PFL_2341 puuA; putative gamma-glutamylputrescine synthetase PuuA
       PFL_0386 glnA_2; glutamine synthetase, type I
       PFL_2473 glnA_3; glutamine synthetase, catalytic domain protein
       PFL_2952 glutamate--ammonia ligase
       PFL_5928 glutamate--ammonia ligase
       PFL_5930 puuA; putative glutamate--putrescine ligase
       PFL_0831 carB; carbamoyl-phosphate synthase, large subunit
       PFL_0830 carA; carbamoyl-phosphate synthase, small subunit
       PFL_3159 glsA; glutaminase A
       PFL_6212 glmS; glutamine-fructose-6-phosphate transaminase, isomerizing
       PFL_1080 SIS domain protein
       PFL_2077 purF; amidophosphoribosyltransferase
K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
K05597 aspQ; glutamin-(asparagin-)ase [EC:3.5.1.38]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K13566 NIT2; omega-amidase [EC:3.5.1.3]
K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
K14268 davT; 5-aminovalerate/4-aminobutyrate aminotransferase [EC:2.6.1.48 2.6.1.19]
K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01915 glnA; glutamine synthetase [EC:6.3.1.2]
K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
K01425 glsA; glutaminase [EC:3.5.1.2]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
     00260 Glycine, serine and threonine metabolism [PATH:pfl00260]
     00270 Cysteine and methionine metabolism [PATH:pfl00270]
     00280 Valine, leucine and isoleucine degradation [PATH:pfl00280]
     00290 Valine, leucine and isoleucine biosynthesis [PATH:pfl00290]
     00300 Lysine biosynthesis [PATH:pfl00300]
     00310 Lysine degradation [PATH:pfl00310]
     00220 Arginine biosynthesis [PATH:pfl00220]
     00330 Arginine and proline metabolism [PATH:pfl00330]
     00340 Histidine metabolism [PATH:pfl00340]
     00350 Tyrosine metabolism [PATH:pfl00350]
     00360 Phenylalanine metabolism [PATH:pfl00360]
     00380 Tryptophan metabolism [PATH:pfl00380]
     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pfl00400]
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:pfl01000]
     01001 Protein kinases [BR:pfl01001]
     01009 Protein phosphatases and associated proteins [BR:pfl01009]
     01002 Peptidases and inhibitors [BR:pfl01002]
       PFL_5320 lspA; signal peptidase II
       PFL_5289 pilD; type IV pilus prepilin peptidase PilD
       PFL_0689 peptidase, A24 family
       PFL_4939 guaA; GMP synthase
       PFL_2340 puuD; gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD
       PFL_5929 putative gamma-glutamyl-gamma-aminobutyrate hydrolase
       PFL_4436 NlpC/P60 family
       PFL_2077 purF; amidophosphoribosyltransferase
       PFL_0453 gltB; glutamate synthase, large subunit
       PFL_6212 glmS; glutamine-fructose-6-phosphate transaminase, isomerizing
       PFL_1080 SIS domain protein
       PFL_4333 asnB; asparagine synthase (glutamine-hydrolyzing)
       PFL_1358 intracellular protease, PfpI family
       PFL_5370 DJ-1 family protein
       PFL_4109 inhA; isonitrile hydratase InhA
       PFL_4276 ErfK/YbiS/YcfS/YnhG family protein
       PFL_2412 putative peptidoglycan binding domain protein
       PFL_1928 CAAX amino terminal protease family protein
       PFL_3281 pepN; membrane alanyl aminopeptidase
       PFL_0050 prlC; oligopeptidase A
       PFL_3210 aprA; extracellular alkaline metalloprotease AprA
       PFL_2483 aprX; metallopeptidase AprX
       PFL_4023 ddpX; D-Ala-D-Ala dipeptidase
       PFL_5858 peptidase, M16 family
       PFL_5859 peptidase, M16 family
       PFL_1066 pepA; leucyl aminopeptidase
       PFL_1383 renal dipeptidase family protein
       PFL_0800 renal dipeptidase family protein
       PFL_1165 dapE; succinyl-diaminopimelate desuccinylase
       PFL_1344 amidohydrolase
       PFL_0337 conserved hypothetical protein
       PFL_3100 map_2; methionine aminopeptidase, type I
       PFL_1175 map_1; methionine aminopeptidase, type I
       PFL_5968 pepP; Xaa-Pro aminopeptidase
       PFL_4151 peptidase, M24 family
       PFL_1603 conserved hypothetical protein
       PFL_4985 conserved hypothetical protein
       PFL_0836 ftsH; ATP-dependent metalloprotease FtsH
       PFL_4248 htpX; heat shock protein HtpX
       PFL_2501 peptidase, M48 family
       PFL_1452 peptidase, M48 family
       PFL_1183 rseP; RIP metalloprotease RseP
       PFL_5477 conserved hypothetical protein
       PFL_3211 peptidase, T4 family
       PFL_1451 mucD; serine protease MucD
       PFL_0933 algW; serine protease AlgW
       PFL_1507 ptrB; protease 2
       PFL_5448 dacA; D-alanyl-D-alanine carboxypeptidase DacA
       PFL_3993 pbpG; D-alanyl-D-alanine endopeptidase
       PFL_1880 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
       PFL_3987 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP
       PFL_4739 clpP; endopeptidase Clp
       PFL_3985 lon_1; endopeptidase La
       PFL_4923 lon_2; endopeptidase La
       PFL_3700 lexA2; putative LexA repressor
       PFL_1949 lexA; LexA repressor
       PFL_4691 rulA; ultraviolet light resistance protein RulA
       PFL_4225 conserved hypothetical protein
       PFL_1070 lepB; signal peptidase I
       PFL_0411 pip; prolyl aminopeptidase
       PFL_2949 alpha/beta hydrolase family protein
       PFL_4394 prc; peptidase, S41 family
       PFL_0368 processing peptidase domain protein
       PFL_5919 penicillin amidase family protein
       PFL_1790 sppA; signal peptide peptidase SppA, 36K type
       PFL_3667 peptidase, S49 family
       PFL_3284 peptidase, S54 family
       PFL_5444 LD-carboxypeptidase family protein
       PFL_0437 hslV; ATP-dependent protease HslVU, peptidase subunit
       PFL_0771 ggt_2; gamma-glutamyltransferase
       PFL_5184 ggt_1; gamma-glutamyltransferase
       PFL_4010 peptidase, U32 family
       PFL_2960 peptidase, U32 family
       PFL_0905 pmbA; PmbA protein
       PFL_0903 tldD; TldD protein
       PFL_3096 ecotin
       PFL_5504 alpha-2-macroglobulin domain protein
       PFL_6193 HflC family protein
       PFL_0569 hflC; HflC protein
       PFL_0568 hflK; HflK protein
K03101 lspA; signal peptidase II [EC:3.4.23.36]
K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K07010 K07010; putative glutamine amidotransferase
K07010 K07010; putative glutamine amidotransferase
K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K05520 yhbO; deglycase [EC:3.5.1.124]
K03152 thiJ; protein deglycase [EC:3.5.1.124]
K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
K16291 erfK; L,D-transpeptidase ErfK/SrfK
K21470 ycbB; L,D-transpeptidase YcbB
K07052 K07052; CAAX protease family protein
K01256 pepN; aminopeptidase N [EC:3.4.11.2]
K01414 prlC; oligopeptidase A [EC:3.4.24.70]
K01406 prtC; serralysin [EC:3.4.24.40]
K01406 prtC; serralysin [EC:3.4.24.40]
K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
K07263 pqqL; zinc protease [EC:3.4.24.-]
K07263 pqqL; zinc protease [EC:3.4.24.-]
K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
K12941 abgB; aminobenzoyl-glutamate utilization protein B
K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
K19689 ampS; aminopeptidase [EC:3.4.11.-]
K08646 MEP; peptidyl-Lys metalloendopeptidase [EC:3.4.24.20]
K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
K09933 mtfA; MtfA peptidase
K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
K04771 degP; serine protease Do [EC:3.4.21.107]
K04691 hhoB; serine protease DegS [EC:3.4.21.-]
K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03503 umuD; DNA polymerase V [EC:3.4.21.-]
K03100 lepB; signal peptidase I [EC:3.4.21.89]
K01259 pip; proline iminopeptidase [EC:3.4.11.5]
K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
K01434 pac; penicillin G amidase [EC:3.5.1.11]
K04773 sppA; protease IV [EC:3.4.21.-]
K04774 sohB; serine protease SohB [EC:3.4.21.-]
K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K08303 prtC; U32 family peptidase [EC:3.4.-.-]
K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
K03592 pmbA; PmbA protein
K03568 tldD; TldD protein
K08276 eco; ecotin
K06894 yfhM; alpha-2-macroglobulin
K04087 hflC; modulator of FtsH protease HflC
K04087 hflC; modulator of FtsH protease HflC
K04088 hflK; modulator of FtsH protease HflK
     01003 Glycosyltransferases [BR:pfl01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:pfl01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:pfl01011]
     01004 Lipid biosynthesis proteins [BR:pfl01004]
     01008 Polyketide biosynthesis proteins [BR:pfl01008]
     01006 Prenyltransferases [BR:pfl01006]
     01007 Amino acid related enzymes [BR:pfl01007]
     00199 Cytochrome P450
     00194 Photosynthesis proteins [BR:pfl00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 24, 2024