KEGG Orthology (KO) - Photorhabdus laumondii subsp. laumondii TTO1

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     KO
 09100 Metabolism
 
   09101 Carbohydrate metabolism
 
   09102 Energy metabolism
 
   09103 Lipid metabolism
 
   09104 Nucleotide metabolism
 
   09105 Amino acid metabolism
     00250 Alanine, aspartate and glutamate metabolism [PATH:plu00250]
     00260 Glycine, serine and threonine metabolism [PATH:plu00260]
     00270 Cysteine and methionine metabolism [PATH:plu00270]
     00280 Valine, leucine and isoleucine degradation [PATH:plu00280]
     00290 Valine, leucine and isoleucine biosynthesis [PATH:plu00290]
     00300 Lysine biosynthesis [PATH:plu00300]
       plu4380 lysC; lysine-sensitive aspartokinase III (aspartate kinase III)
       plu0563 thrA; aspartokinase I-homoserine dehydrogenase I
       plu4755 metL; bifunctional aspartokinase/homoserine dehydrogenase II (AKII-HDII) [Includes: Aspartokinase II; homoserine dehydrogenase II]
       plu0007 asd; aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH)
       plu1530 unnamed protein product; Similar to dihydrodipicolinate synthetase
       plu2746 dapA; dihydrodipicolinate synthase
       plu0602 dapB; Dihydrodipicolinate reductase (DHPR)
       plu0669 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
       plu0394 argD; acetylornithine delta-aminotransferase
       plu2722 dapE; Succinyl-diaminopimelate desuccinylase (SDAP)
       plu4640 dapF; diaminopimelate epimerase (DAP epimerase)
       plu1191 lysA; diaminopimelate decarboxylase (DAP decarboxylase)
       plu0752 unnamed protein product; Similar to diaminopimelate decarboxylase (DAP decarboxylase)
       plu3659 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (UDP-N-acetylmuramyl-tripeptide synthetase) (meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase)
       plu3658 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme)
K00928 lysC; aspartate kinase [EC:2.7.2.4]
K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
     00310 Lysine degradation [PATH:plu00310]
     00220 Arginine biosynthesis [PATH:plu00220]
     00330 Arginine and proline metabolism [PATH:plu00330]
     00340 Histidine metabolism [PATH:plu00340]
     00350 Tyrosine metabolism [PATH:plu00350]
     00360 Phenylalanine metabolism [PATH:plu00360]
     00380 Tryptophan metabolism [PATH:plu00380]
     00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:plu00400]
 
   09106 Metabolism of other amino acids
 
   09107 Glycan biosynthesis and metabolism
 
   09108 Metabolism of cofactors and vitamins
 
   09109 Metabolism of terpenoids and polyketides
 
   09110 Biosynthesis of other secondary metabolites
 
   09111 Xenobiotics biodegradation and metabolism
 
   09112 Not included in regular maps
 
 09120 Genetic Information Processing
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
     01000 Enzymes [BR:plu01000]
     01001 Protein kinases [BR:plu01001]
     01009 Protein phosphatases and associated proteins [BR:plu01009]
     01002 Peptidases and inhibitors [BR:plu01002]
       plu0592 lspA; Lipoprotein signal peptidase (Prolipoprotein signal peptidase) (Signal peptidase II) (SPase II)
       plu1733 Type 4 prepilin-like proteins leader peptide processing enzyme (Pectic enzymes secretion protein outO) [Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase]
       plu1186 unnamed protein product; Similar to type IV prepilin peptidase
       plu1057 pilU; Similar to prepilin peptidase PilU protein
       plu4303 pcp; Pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase)
       plu4418 unnamed protein product; Highly similar to pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase)
       plu2712 guaA; GMP synthetase [glutamine-hydrolyzing] (glutamine amidotransferase) (GMP synthetase)
       plu0852 unnamed protein product; Highly similar to toxin secretion ABC transporter ATP-binding protein
       plu2864 spr; Lipoprotein spr precursor
       plu2653 nlpC; Probable lipoprotein NlpC precursor
       plu3167 purF; amidophosphoribosyltransferase (Glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (GPATASE)
       plu4009 gltB; glutamate synthase [NADPH] large chain precursor (glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain)
       plu0037 glmS; Glucosamine-fructose-6-phosphate aminotransferase [isomerizing] (hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (glucosamine-6-phosphate synthase)
       plu2770 unnamed protein product; Similar to asparagine synthetase B AsnB of Escherichia coli
       plu3788 unnamed protein product; Similar to cytotoxic effector protein YopT of Yersinia spp
       plu2401 unnamed protein product; Similar to Yop targeted effector YopT
       plu2616 unnamed protein product; Highly similar to unknown protein YnhG precursor and YcfS precursor of Escherichia coli
       plu1472 unnamed protein product; Similar to putative membrane protein
       plu1755 pepN; aminopeptidase N
       plu0124 opdA; oligopeptidase A
       plu0655 prtA; Alkaline metalloprotease precursor PrtA
       plu0631 ptrA; Protease III precursor (pitrilysin)
       plu0306 unnamed protein product; Similar to unknown protein YhjJ precursor of Escherichia coli
       plu4481 pepA; cytosol aminopeptidase (leucine aminopeptidase) (LAP) (leucyl aminopeptidase) (aminopeptidase A/I)
       plu3276 pepB; Peptidase B (Aminopeptidase B)
       plu2722 dapE; Succinyl-diaminopimelate desuccinylase (SDAP)
       plu2810 pepT; peptidase T (aminotripeptidase) (tripeptidase)
       plu1240 pepD; aminoacyl-histidine dipeptidase (XAA-His dipeptidase) (beta-alanyl-histidine dipeptidase) (carnosinase) (peptidase D)
       plu3726 abgA; aminobenzoyl-glutamate utilization protein A
       plu3725 abgB; aminobenzoyl-glutamate utilization protein B
       plu2116 yebA; Putative peptidase precursor protein YebA
       plu0671 map; methionine aminopeptidase
       plu4401 pepQ; Xaa-Pro dipeptidase (X-Pro dipeptidase) (proline dipeptidase) (prolidase) (imidodipeptidase)
       plu3601 pepP; Xaa-Pro aminopeptidase (X-Pro aminopeptidase) (aminopeptidase P II) (APP-II) (aminoacylproline aminopeptidase)
       plu2609 unnamed protein product; Some similarities with probable aminopeptidase
       plu4535 ftsH; cell division protein
       plu2681 htpX; protease HtpX (heat shock protein)
       plu2750 unnamed protein product; Highly similar to unknown protein YfgC precursor of Escherichia coli. Putative transmembrane protein
       plu0679 ecfE; Protease EcfE
       plu2258 unnamed protein product; Similar to D-aminopeptidase
       plu4018 degQ; Protease precursor DegQ
       plu4022 degS; Protease precursor DegS
       plu2716 ptrB; protease II (oligopeptidase B)
       plu1573 dacC; penicillin-binding protein 6 precursor (D-alanyl-D-alanine carboxypeptidase fraction C) (DD-pept (DD-carboxypeptidase) (PBP-6)idase)
       plu1294 dacA; penicillin-binding protein 5 precursor (D-alanyl-D-alanine carboxypeptidase fraction A) (DD-peptidase) (DD-caroboxypeptidase) (PBP-5)
       plu4478 ampH; Penicillin-binding protein AmpH
       plu4539 dacB; penicillin-binding protein 4 precursor (PBP-4) [Includes: D-alanyl-D-alanine carboxypeptidase (DD-peptidase) (DD-carboxypeptidase); D-alanyl-D-alanine-endopeptidase (DD-endopeptidase)]
       plu3869 clpP; ATP-dependent proteolytic subunit of clpA-clpP serine protease, heat shock protein F21.5 (Endopeptidase Clp)
       plu3867 lon; endopeptidase La, DNA-binding, ATP-dependent protease; heat shock K-protein
       plu1773 unnamed protein product; Similar to putative protease La homolog, YcbZ of Escherichia coli
       plu4374 lexA; LexA repressor
       plu3341 lepB; Signal peptidase I (SPase I) (Leader peptidase I)
       plu2691 pip; proline iminopeptidase (PIP)
       plu2682 prc; tail-specific protease precursor (protease RE) (PRC protein)
       plu2553 sppA; protease IV (endopeptidase IV) (signal peptide peptidase)
       plu2439 sohB; Possible protease sohB
       plu0196 glpG; Protein GlpG
       plu4762 hslV; ATP-dependent protease HslV (heat shock protein)
       plu3908 ggt; gamma-glutamyltranspeptidase
       plu2780 unnamed protein product; High similar to putative protease YegQ of Escherichia coli
       plu4060 pmbA; PmbA protein, involved in the maturation of antibiotic
       plu4064 tldD; TldD protein, suppresses the inhibitory activity of the carbon storage regulator (CSRA)
       plu1370 unnamed protein product; Similar to hypothetical lipoprotein YfhM precursor of Escherichia coli
       plu4578 hflC; Lambda CII stability-governing protein HflC
       plu4579 hflK; protease specific for phage lambda cII repressor
K03101 lspA; signal peptidase II [EC:3.4.23.36]
K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
K13695 nlpC; probable lipoprotein NlpC
K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
K08599 yopT; YopT peptidase [EC:3.4.22.-]
K08599 yopT; YopT peptidase [EC:3.4.22.-]
K19236 ycfS; L,D-transpeptidase YcfS
K07052 K07052; CAAX protease family protein
K01256 pepN; aminopeptidase N [EC:3.4.11.2]
K01414 prlC; oligopeptidase A [EC:3.4.24.70]
K01406 prtC; serralysin [EC:3.4.24.40]
K01407 ptrA; protease III [EC:3.4.24.55]
K07263 pqqL; zinc protease [EC:3.4.24.-]
K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
K01270 pepD; dipeptidase D [EC:3.4.13.-]
K12940 abgA; aminobenzoyl-glutamate utilization protein A
K12941 abgB; aminobenzoyl-glutamate utilization protein B
K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
K19689 ampS; aminopeptidase [EC:3.4.11.-]
K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
K04772 degQ; serine protease DegQ [EC:3.4.21.-]
K04691 hhoB; serine protease DegS [EC:3.4.21.-]
K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K03100 lepB; signal peptidase I [EC:3.4.21.89]
K01259 pip; proline iminopeptidase [EC:3.4.11.5]
K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
K04773 sppA; protease IV [EC:3.4.21.-]
K04774 sohB; serine protease SohB [EC:3.4.21.-]
K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
K08303 prtC; U32 family peptidase [EC:3.4.-.-]
K03592 pmbA; PmbA protein
K03568 tldD; TldD protein
K06894 yfhM; alpha-2-macroglobulin
K04087 hflC; modulator of FtsH protease HflC
K04088 hflK; modulator of FtsH protease HflK
     01003 Glycosyltransferases [BR:plu01003]
     01005 Lipopolysaccharide biosynthesis proteins [BR:plu01005]
     01011 Peptidoglycan biosynthesis and degradation proteins [BR:plu01011]
     01004 Lipid biosynthesis proteins [BR:plu01004]
     01008 Polyketide biosynthesis proteins [BR:plu01008]
     01006 Prenyltransferases [BR:plu01006]
     01007 Amino acid related enzymes [BR:plu01007]
     00199 Cytochrome P450 [BR:plu00199]
     00194 Photosynthesis proteins [BR:plu00194]
 
   09182 Protein families: genetic information processing
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 24, 2024