DNA Repair and Recombination Proteins - Pseudomonas putida GB-1

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     KO
 Eukaryotic type
 
 Prokaryotic type
   SSBR (single strand breaks repair)
   DSBR (double strand breaks repair)
     HR (homologous recombination)
       RecBC pathway proteins
       RecFOR pathway proteins
         PputGB1_1231 recA protein
         PputGB1_4638 DNA repair protein RadA
         PputGB1_0005 DNA replication and repair protein RecF
         PputGB1_5358 ATP-dependent DNA helicase RecG
         PputGB1_1082 single-stranded-DNA-specific exonuclease RecJ
         PputGB1_4372 DNA repair protein RecO
         PputGB1_3832 recombination protein RecR
         PputGB1_4730 DNA repair protein RecN
         PputGB1_1300 putative exonuclease RdgC
         PputGB1_4202 Holliday junction DNA helicase RuvA
         PputGB1_4201 Holliday junction DNA helicase RuvB
         PputGB1_4203 crossover junction endodeoxyribonuclease RuvC
K03553 recA; recombination protein RecA 
K04485 radA; DNA repair protein RadA/Sms 
K03629 recF; DNA replication and repair protein RecF 
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] 
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
K03584 recO; DNA repair protein RecO (recombination protein O) 
K06187 recR; recombination protein RecR 
K03631 recN; DNA repair protein RecN (Recombination protein N) 
K03554 rdgC; recombination associated protein RdgC 
K03550 ruvA; holliday junction DNA helicase RuvA 
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] 
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] 
       AddAB pathway proteins
       Other HR factor
       Archaeal homologous recombinant proteins
     NHEJ (non-homologous end-joining)
       Two-component NHEJ DNA repair complex
       SHIIR (short-homology-independent illegitimate recombination)
       SHDIR (short-homology-dependent illegitimate recombination)
         RecET pathway
           PputGB1_1082 single-stranded-DNA-specific exonuclease RecJ
           PputGB1_4372 DNA repair protein RecO
           PputGB1_3832 recombination protein RecR
           PputGB1_5017 DNA ligase (NAD(+))
           PputGB1_3838 DNA ligase, NAD-dependent
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] 
K03584 recO; DNA repair protein RecO (recombination protein O) 
K06187 recR; recombination protein RecR 
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] 
         Facilitator
         Supressor
   TLS (translesion DNA synthesis) factors
   Other factors with a suspected DNA repair function

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Last updated: March 29, 2024