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KO |
 09100 Metabolism
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 09120 Genetic Information Processing
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09121 Transcription
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09122 Translation
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09123 Folding, sorting and degradation
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09124 Replication and repair
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03030 DNA replication [PATH:rci03030]
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03410 Base excision repair [PATH:rci03410]
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 RRC63 predicted endonuclease III
RCIX927 predicted endonuclease III
RCIX2536 putative DNA glycosylase
RCIX1098 mpg; putative 3-methyladenine DNA glycosylase
RCIX2293 pcn; putative DNA polymerase sliding clamp (proliferating cell nuclear antigen)
RCIX607 fen; flap structure-specific endonuclease
RRC227 lig; ATP-dependent DNA ligase
RCIX276 mutM; formamidopyrimidine-DNA glycosylase
RRC526 predicted uracil-DNA glycosylase superfamily protein
RCIX1223 xthA; exodeoxyribonuclease III
RCIX2501 predicted endonuclease/exonuclease
RRC305 nfo; putative endonuclease IV
LRC22 hypothetical protein
RCIX2741 putative phosphoesterase
RCIX2021 putative phosphoesterase
RCIX2102 recJ; putative single-stranded DNA-specific exonuclease
LRC57 putative single-stranded DNA-specific exonuclease (RecJ-like)
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K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
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03420 Nucleotide excision repair [PATH:rci03420]
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03430 Mismatch repair [PATH:rci03430]
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03440 Homologous recombination [PATH:rci03440]
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03450 Non-homologous end-joining [PATH:rci03450]
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03460 Fanconi anemia pathway
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09126 Chromosome
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09125 Information processing in viruses
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09130 Environmental Information Processing
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09140 Cellular Processes
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09150 Organismal Systems
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09160 Human Diseases
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09180 Brite Hierarchies
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09181 Protein families: metabolism
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09182 Protein families: genetic information processing
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03000 Transcription factors [BR:rci03000]
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03021 Transcription machinery [BR:rci03021]
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03019 Messenger RNA biogenesis [BR:rci03019]
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03041 Spliceosome [BR:rci03041]
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03011 Ribosome [BR:rci03011]
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03009 Ribosome biogenesis [BR:rci03009]
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03016 Transfer RNA biogenesis [BR:rci03016]
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03012 Translation factors [BR:rci03012]
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03110 Chaperones and folding catalysts [BR:rci03110]
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04131 Membrane trafficking [BR:rci04131]
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04121 Ubiquitin system [BR:rci04121]
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03051 Proteasome [BR:rci03051]
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03032 DNA replication proteins [BR:rci03032]
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03036 Chromosome and associated proteins [BR:rci03036]
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03400 DNA repair and recombination proteins [BR:rci03400]
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RCIA88 predicted 6-O-methylguanine-DNA methyltransferase
RCIX1098 mpg; putative 3-methyladenine DNA glycosylase
RCIX2536 putative DNA glycosylase
RRC63 predicted endonuclease III
RCIX927 predicted endonuclease III
RCIX2293 pcn; putative DNA polymerase sliding clamp (proliferating cell nuclear antigen)
RCIX607 fen; flap structure-specific endonuclease
RRC227 lig; ATP-dependent DNA ligase
RCIX2277 repD; putative ATP-dependent DNA-repair helicase
RCIX2394 putative ATP-dependent helicase
LRC132 conserved hypothetical protein
RCIX2092 hypothetical protein
LRC494 hypothetical protein
RCIX1986 dut; putative dUTP pyrophosphatase
RRC526 predicted uracil-DNA glycosylase superfamily protein
RCIX276 mutM; formamidopyrimidine-DNA glycosylase
RCIX1223 xthA; exodeoxyribonuclease III
RCIX2501 predicted endonuclease/exonuclease
RRC305 nfo; putative endonuclease IV
LRC22 hypothetical protein
RRC272 nfi; putative endonuclease V
RCIX2741 putative phosphoesterase
RCIX2021 putative phosphoesterase
RCIX2102 recJ; putative single-stranded DNA-specific exonuclease
LRC57 putative single-stranded DNA-specific exonuclease (RecJ-like)
RRC360 uvrA-2; excinuclease ABC, ATPase subunit
LRC310 pcrA; putative ATP-dependent DNA helicase
LRC5 mutSb; putative DNA mismatch repair protein, N-terminal fragment
LRC6 mutSa; putative DNA mismatch repair protein, C-terminal fragment
LRC316 dam; N6 adenine-specific DNA-methyltransferase
RCIX2629 ruvA; holliday junction resolvasome, DNA-binding subunit
RCIX2631 ruvB; holliday junction resolvasome, helicase subunit
RCIX2628 ruvC; holliday junction resolvasome, endonuclease subunit
RRC96 predicted DNA repair ATPase (Rad50-like)
RRC95 predicted DNA repair exonuclease (Rad32/Mre11-like)
RCIX12 conserved hypothetical protein
RCIX1153 conserved hypothetical protein
RCIX978 radA; DNA repair/recombination protein A
RCIX702 radB; DNA repair/recombination protein B
RCIX575 putative ski2-type helicase
RCIX1966 conserved hypothetical protein
RCIX58 gyrA; type II DNA topoisomerase II (gyrase), subunit A
RCIX59 gyrB; type II DNA topoisomerase II (gyrase), subunit B
RCIX2309 topA-1; DNA topoisomerase I
RCIX2432 topA-2; DNA topoisomerase I
RCIX1772 recQ; ATP-dependent DNA helicase
RCIX2412 hypothetical protein
RCIX1179 polX; DNA-directed DNA polymerase X
RCIX869 Lhr-like RNA helicase
RCIX231 ATP-dependent RNA helicase
RCIX529 conserved hypothetical protein
RRC440 conserved hypothetical protein
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K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K04802 PCNA; proliferating cell nuclear antigen
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
K17815 EXO5; exonuclease V [EC:3.1.-.-]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03701 uvrA; excinuclease ABC subunit A
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K07456 mutS2; DNA mismatch repair protein MutS2
K07456 mutS2; DNA mismatch repair protein MutS2
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03546 sbcC; DNA repair protein SbcC/Rad50
K03547 sbcD; DNA repair protein SbcD/Mre11
K15342 cas1; CRISP-associated protein Cas1
K15342 cas1; CRISP-associated protein Cas1
K04483 radA; DNA repair protein RadA
K04484 radB; DNA repair protein RadB
K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K02347 polX; DNA polymerase (family X)
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
K22585 nreA; DNA repair protein NreA
K22585 nreA; DNA repair protein NreA
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03029 Mitochondrial biogenesis [BR:rci03029]
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09183 Protein families: signaling and cellular processes
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09185 Viral protein families
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09184 RNA family
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09190 Not Included in Pathway or Brite
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KEGG Orthology (KO) - Methanocella arvoryzae