KEGG Orthology (KO) - Sulfobacillus acidophilus DSM 10332

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     KO
 09100 Metabolism
 
 09120 Genetic Information Processing
 
   09121 Transcription
 
   09122 Translation
 
   09123 Folding, sorting and degradation
 
   09124 Replication and repair
     03030 DNA replication [PATH:sap03030]
     03410 Base excision repair [PATH:sap03410]
     03420 Nucleotide excision repair [PATH:sap03420]
     03430 Mismatch repair [PATH:sap03430]
     03440 Homologous recombination [PATH:sap03440]
       Sulac_1540 single-stranded-DNA-specific exonuclease RecJ
       Sulac_3508 single-strand binding protein
       Sulac_0664 single-strand binding protein
       Sulac_0003 DNA replication and repair protein RecF
       Sulac_2919 DNA replication and repair protein RecO
       Sulac_0119 DNA replication and repair protein RecR
       Sulac_1856 Protein recA
       Sulac_1406 Holliday junction DNA helicase subunit RuvA
       Sulac_1407 Holliday junction DNA helicase subunit RuvB
       Sulac_1405 Holliday junction endonuclease RuvC
       Sulac_2503 ATP-dependent DNA helicase RecG
       Sulac_1486 DNA polymerase III, alpha subunit
       Sulac_1906 DNA polymerase III polC-type
       Sulac_0002 DNA polymerase III, beta subunit
       Sulac_1209 DNA polymerase III, beta subunit
       Sulac_0117 DNA polymerase III, subunits gamma and tau
       Sulac_2956 DNA polymerase III, delta subunit
       Sulac_0152 hypothetical protein
       Sulac_1148 RNAse T
       Sulac_2515 replication restart DNA helicase PriA
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K03629 recF; DNA replication and repair protein RecF
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
     03450 Non-homologous end-joining [PATH:sap03450]
     03460 Fanconi anemia pathway
 
   09126 Chromosome
 
   09125 Information processing in viruses
 
 09130 Environmental Information Processing
 
 09140 Cellular Processes
 
 09150 Organismal Systems
 
 09160 Human Diseases
 
 09180 Brite Hierarchies
 
   09181 Protein families: metabolism
 
   09182 Protein families: genetic information processing
     03000 Transcription factors [BR:sap03000]
     03021 Transcription machinery [BR:sap03021]
     03019 Messenger RNA biogenesis [BR:sap03019]
     03041 Spliceosome
     03011 Ribosome [BR:sap03011]
     03009 Ribosome biogenesis [BR:sap03009]
     03016 Transfer RNA biogenesis [BR:sap03016]
     03012 Translation factors [BR:sap03012]
     03110 Chaperones and folding catalysts [BR:sap03110]
     04131 Membrane trafficking [BR:sap04131]
     04121 Ubiquitin system
     03051 Proteasome
     03032 DNA replication proteins [BR:sap03032]
     03036 Chromosome and associated proteins [BR:sap03036]
     03400 DNA repair and recombination proteins [BR:sap03400]
       Sulac_2723 3-methyladenine DNA glycosylase
       Sulac_1567 A/G-specific DNA-adenine glycosylase
       Sulac_3448 endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
       Sulac_3199 type III restriction protein res subunit
       Sulac_0352 NUDIX hydrolase
       Sulac_0043 NUDIX hydrolase
       Sulac_1923 NUDIX hydrolase
       Sulac_2052 NUDIX hydrolase
       Sulac_0690 deoxyuridine 5'-triphosphate nucleotidohydrolase
       Sulac_3486 methylated-DNA/protein-cysteinemethyltransferase
       Sulac_3452 G/U mismatch-specific uracil-DNA glycosylase
       Sulac_2702 phage SPO1 DNA polymerase-related protein
       Sulac_0872 Uracil-DNA glycosylase superfamily
       Sulac_1824 phage SPO1 DNA polymerase-related protein
       Sulac_2743 DNA-3-methyladenine glycosylase II
       Sulac_2591 DNA-(apurinic or apyrimidinic site) lyase, Formamidopyrimidine-DNA glycosylase
       Sulac_1893 Endonuclease IV
       Sulac_3253 Endonuclease IV
       Sulac_1540 single-stranded-DNA-specific exonuclease RecJ
       Sulac_2663 DNA ligase
       Sulac_2796 Excinuclease ABC subunit A
       Sulac_2797 Excinuclease ABC subunit B
       Sulac_2795 Excinuclease ABC subunit C
       Sulac_2664 UvrD/REP helicase
       Sulac_0061 UvrD/REP helicase
       Sulac_0279 DNA-directed RNA polymerase subunit beta
       Sulac_0280 DNA-directed RNA polymerase subunit beta'
       Sulac_0315 DNA-directed RNA polymerase subunit alpha
       Sulac_0135 DNA-directed RNA polymerase delta subunit
       Sulac_2517 DNA-directed RNA polymerase subunit omega
       Sulac_0177 transcription-repair coupling factor
       Sulac_1843 DNA mismatch repair protein MutS
       Sulac_1398 MutS2 protein
       Sulac_1842 DNA mismatch repair protein MutL
       Sulac_1619 Exodeoxyribonuclease VII large subunit
       Sulac_1620 Exodeoxyribonuclease VII small subunit
       Sulac_1486 DNA polymerase III, alpha subunit
       Sulac_1906 DNA polymerase III polC-type
       Sulac_0002 DNA polymerase III, beta subunit
       Sulac_1209 DNA polymerase III, beta subunit
       Sulac_2956 DNA polymerase III, delta subunit
       Sulac_0152 hypothetical protein
       Sulac_1148 RNAse T
       Sulac_0117 DNA polymerase III, subunits gamma and tau
       Sulac_3508 single-strand binding protein
       Sulac_0664 single-strand binding protein
       Sulac_3471 DNA adenine methylase Dam
       Sulac_1161 D12 class N6 adenine-specific DNA methyltransferase
       Sulac_0059 T/G mismatch-specific endonuclease
       Sulac_1856 Protein recA
       Sulac_1406 Holliday junction DNA helicase subunit RuvA
       Sulac_1407 Holliday junction DNA helicase subunit RuvB
       Sulac_1405 Holliday junction endonuclease RuvC
       Sulac_2515 replication restart DNA helicase PriA
       Sulac_0003 DNA replication and repair protein RecF
       Sulac_2503 ATP-dependent DNA helicase RecG
       Sulac_2919 DNA replication and repair protein RecO
       Sulac_0119 DNA replication and repair protein RecR
       Sulac_1625 DNA replication and repair protein RecN
       Sulac_0202 hypothetical protein
       Sulac_3297 CRISPR-associated protein Cas1
       Sulac_1773 Ku protein
       Sulac_1771 DNA primase small subunit
       Sulac_0007 DNA gyrase subunit A
       Sulac_0006 DNA gyrase subunit B
       Sulac_2408 DNA topoisomerase I
       Sulac_0184 histone family protein DNA-binding protein
       Sulac_0363 ATP-dependent DNA helicase, RecQ family
       Sulac_1836 SOS-response transcriptional repressor, LexA
       Sulac_1103 phage repressor like transcriptional regulator, XRE family
       Sulac_1847 hypothetical protein
       Sulac_1271 DNA polymerase III, alpha subunit
       Sulac_1855 Regulatory protein recX
       Sulac_1947 Exonuclease RNase T and DNA polymerase III
       Sulac_2008 ribonucleoside-diphosphate reductase class II
       Sulac_1899 phosphoesterase RecJ domain protein
K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
K13531 adaB; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
K03701 uvrA; excinuclease ABC subunit A
K03702 uvrB; excinuclease ABC subunit B
K03703 uvrC; excinuclease ABC subunit C
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
K03048 rpoE; DNA-directed RNA polymerase subunit delta
K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
K03555 mutS; DNA mismatch repair protein MutS
K07456 mutS2; DNA mismatch repair protein MutS2
K03572 mutL; DNA mismatch repair protein MutL
K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
K03111 ssb; single-strand DNA-binding protein
K03111 ssb; single-strand DNA-binding protein
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K06223 dam; DNA adenine methylase [EC:2.1.1.72]
K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
K03553 recA; recombination protein RecA
K03550 ruvA; holliday junction DNA helicase RuvA
K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
K03629 recF; DNA replication and repair protein RecF
K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
K03584 recO; DNA repair protein RecO (recombination protein O)
K06187 recR; recombination protein RecR
K03631 recN; DNA repair protein RecN (Recombination protein N)
K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
K15342 cas1; CRISP-associated protein Cas1
K10979 ku; DNA end-binding protein Ku
K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
K03530 hupB; DNA-binding protein HU-beta
K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K01356 lexA; repressor LexA [EC:3.4.21.88]
K14160 imuA; protein ImuA
K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
K03565 recX; regulatory protein
K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
     03029 Mitochondrial biogenesis [BR:sap03029]
 
   09183 Protein families: signaling and cellular processes
 
   09185 Viral protein families
 
   09184 RNA family
 
 09190 Not Included in Pathway or Brite

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Last updated: April 23, 2024